Citrus Sinensis ID: 017064

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF
Secondary Structure (PSIPRED)
ccccccHHHHHHHHcccccccHHHHHHHHccHHHHHHHHHcccccccEEEEEEcccccccccEEEEEEccccccccEEEEEEEEEcccHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEccccccccccEEEcccccEEEccccccHHHHHcccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHccccEEEccccccHHHHHHHHHccccccEEEEccccHHHHHHHHccccccEEEEEccccccccccccHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEccEEEEccccHHHHHHHHHccccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHccccHHHcHHHcccccccHHHHHHHHHHccccccEEEEEEccccccHEEEEEEEccccccccEEEEEEEEEEccHHHHHHHHccccccccccEEcccEEEEEEEEEcccccccccccEEEEccccccccEcEEEEccHccccccccccHHHHHHccHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHcccEEEEHHHccHHHHHHHHHccccEEEEEEcccHHHHHHHHHccccccEEEEccccccccEEEcHHHHHHcccEEEEccHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccccEEEEEc
Coil and Loop (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFsalmsppskavvyeregppdsvikmielppvevkeNDVCVKMLaapinpsdinriegvypvrpkvpavggyegvgEVYSVGsavtrlapgdwvipsppssgtwqsyvvkdqsvwhkvskdspmEYAATIIVNPLTALRMledfttlnsgdsivqngatsIVGQCIIQIARHRGIHSINIirdragsdEAKEKLKglgadevfteSQLEVKNVKGllanlpepalgfncvggnsASKVLKFLSqggtmvtyggmskkpitvstsaFIFKDLSLKGFWLQKwlssekateCRNMIDYLLCLAREgklkydmelvpfnNFQTALSKAlglhgsqpkqvikf
Flexible Loop (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFsalmsppskavvyeregppdsvIKMIELPPVEVKENDVCVKMLAapinpsdinriegvypvRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHkvskdspmeYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGlgadevftesQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKAlglhgsqpkqvikf
Low Complexity Region (SEG)
MALARSVAVKLINRSISAASIFSLEWagarrvqaqrvraFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPavggyegvgevysvgsavTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF
Disordered region (IsUnstruct)
******VAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSAL********V*********VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD**************GADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALG************
Disordered Region (DISOPRED)
*********************************************PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF
Disordered Region (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGL***********
Disordered Region (DISPRO)
****RSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	378	2.2.26 [Sep-21-2011]
Q8LCU7	375	Probable trans-2-enoyl-Co	yes	no	0.904	0.912	0.783	1e-162
Q9Z311	373	Trans-2-enoyl-CoA reducta	yes	no	0.880	0.892	0.471	6e-83
Q9DCS3	373	Trans-2-enoyl-CoA reducta	yes	no	0.939	0.951	0.441	2e-81
Q9BV79	373	Trans-2-enoyl-CoA reducta	yes	no	0.838	0.849	0.462	6e-79
Q7YS70	373	Trans-2-enoyl-CoA reducta	yes	no	0.828	0.839	0.464	6e-76
Q6GQN8	377	Trans-2-enoyl-CoA reducta	yes	no	0.835	0.838	0.445	8e-74
Q28GQ2	350	Trans-2-enoyl-CoA reducta	yes	no	0.828	0.894	0.464	1e-70
Q9V6U9	357	Probable trans-2-enoyl-Co	yes	no	0.915	0.969	0.427	2e-70
Q54YT4	350	Trans-2-enoyl-CoA reducta	yes	no	0.851	0.92	0.401	6e-65
O45903	344	Probable trans-2-enoyl-Co	yes	no	0.767	0.843	0.436	1e-64

>sp|Q8LCU7|MECR_ARATH Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Arabidopsis thaliana GN=At3g45770 PE=1 SV=1

 Score =  573 bits (1476), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 268/342 (78%), Positives = 301/342 (88%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           VLK+L +GGTMVTYGGMSKKPITVST++FIFKDL+L+GFWLQ WLS  K  ECR MIDYL
Sbjct: 274 VLKYLREGGTMVTYGGMSKKPITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYL 333

Query: 337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           L LAR+GKLKY+ ELVPF  F  AL KALG  G QPKQVI F
Sbjct: 334 LGLARDGKLKYETELVPFEEFPVALDKALGKLGRQPKQVITF 375

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 8

>sp|Q9Z311|MECR_RAT Trans-2-enoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Mecr PE=2 SV=1

 Score =  308 bits (788), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 158/335 (47%), Positives = 216/335 (64%), Gaps = 2/335 (0%)

Query: 33  QAQRVRAFSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD 91
           Q +   ++SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSD
Sbjct: 27  QGRTTSSYSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSD 86

Query: 92  INRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ 151
           IN I+G Y + PK+PAVGG EGVG+V +VGS+V+ L PGDWVIP+    GTW++  V  +
Sbjct: 87  INMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSE 146

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH 211
                V KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA  
Sbjct: 147 EALIGVPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASA 206

Query: 212 RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271
            G+ +IN+IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG
Sbjct: 207 LGLKTINVIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGG 266

Query: 272 NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331
            S++++L+ L+ GGTMVTYGGM+K+P+T S S  IFKDL L+GFWL +W  +    E + 
Sbjct: 267 KSSTELLRHLAPGGTMVTYGGMAKQPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKE 326

Query: 332 MIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKAL 365
           +I  L  L R+G+L       +P  ++Q AL  ++
Sbjct: 327 LILILCNLIRQGQLTAPAWSGIPLQDYQQALEASM 361

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9DCS3|MECR_MOUSE Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Mecr PE=2 SV=2

 Score =  303 bits (776), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 159/360 (44%), Positives = 226/360 (62%), Gaps = 5/360 (1%)

Query: 11  LINRSISAASIFSLEWAG---ARRVQAQRVRAFSALMSPPS-KAVVYEREGPPDSVIKMI 66
           L+++ ++ A   + + AG   A     +   ++SAL  P   +A+VY   G P  V+++ 
Sbjct: 2   LVSQRVTGARARAPQLAGLLEAWYRHGRTTSSYSALSEPSRVRALVYGNHGDPAKVVQLK 61

Query: 67  ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126
            L    V+ +DV V+MLAAPINPSDIN I+G Y + PK+PAVGG EGVG+V +VGS+V+ 
Sbjct: 62  NLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSA 121

Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 186
           L PGDWVIP+    GTW++  V  +     + KD P++ AAT+ VNP TA RML DF  L
Sbjct: 122 LKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQL 181

Query: 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
             GDS++QN + S VGQ +IQIA    + +IN++RDR    +  ++LK LGAD V TE +
Sbjct: 182 QPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDLGADYVLTEEE 241

Query: 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFI 306
           L +   K +  +LP P L  NCVGG S++++L+ L+ GGTMVTYGGM+K+P+T S S  I
Sbjct: 242 LRMPETKTIFKDLPLPRLALNCVGGKSSTELLRHLAPGGTMVTYGGMAKQPVTASVSLLI 301

Query: 307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY-DMELVPFNNFQTALSKAL 365
           FKDL L+GFWL +W  +    E + +I  L  L R+G+L       VP   +Q AL  ++
Sbjct: 302 FKDLKLRGFWLSQWKKNHSPDEFKELILTLCNLIRQGRLTAPSCSEVPLQGYQQALEASM 361

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9BV79|MECR_HUMAN Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=2

 Score =  294 bits (753), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 205/318 (64%), Gaps = 1/318 (0%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y   P++PAV
Sbjct: 44  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAV 103

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG EGV +V +VGS VT L PGDWVIP+    GTW++  V  +    +V  D P++ AAT
Sbjct: 104 GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 163

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR    +
Sbjct: 164 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 223

Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288
             ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L++GGTMV
Sbjct: 224 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMV 283

Query: 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348
           TYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  L R G+L   
Sbjct: 284 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP 343

Query: 349 -MELVPFNNFQTALSKAL 365
               VP  ++Q+AL  ++
Sbjct: 344 ACSQVPLQDYQSALEASM 361

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q7YS70|MECR_BOVIN Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos taurus GN=MECR PE=1 SV=1

 Score =  284 bits (727), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 146/314 (46%), Positives = 198/314 (63%), Gaps = 1/314 (0%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G Y + P++PAV
Sbjct: 44  RALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGNYGLLPQLPAV 103

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG EGVG+V +VGS VT + PGDWVIP+ P  GTW++  V  +     V  D P++ AAT
Sbjct: 104 GGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVPSDIPLQSAAT 163

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN++RD     +
Sbjct: 164 LGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTINVLRDTPDLQK 223

Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288
             + LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L+ GGTMV
Sbjct: 224 LTDTLKNLGANHVVTEEELRKPEMKSFFKDVPQPRLALNCVGGKSSTELLRHLAPGGTMV 283

Query: 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348
           TYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  L R G+L   
Sbjct: 284 TYGGMAKQPVIASVSQLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP 343

Query: 349 -MELVPFNNFQTAL 361
               VP  ++  AL
Sbjct: 344 ACSEVPLQDYLCAL 357

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q6GQN8|MECR_DANRE Trans-2-enoyl-CoA reductase, mitochondrial OS=Danio rerio GN=mecr PE=2 SV=2

 Score =  277 bits (709), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 142/319 (44%), Positives = 196/319 (61%), Gaps = 3/319 (0%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++PAVG
Sbjct: 47  ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVG 106

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
           G EGV +V  VG  V  L  GDWVIP     GTW++  V        + KD P+  AAT+
Sbjct: 107 GNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATL 166

Query: 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
            VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR    + 
Sbjct: 167 GVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDRPDLRQL 226

Query: 230 KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVT 289
            ++L  +GA  V TE  L    +K L  + P P L  N VGG SA+++L+ L  GG++VT
Sbjct: 227 SDRLTAMGATHVITEETLRRPEMKELFKSCPRPKLALNGVGGKSATELLRHLQSGGSLVT 286

Query: 290 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE--CRNMIDYLLCLAREGKLKY 347
           YGGM+K+P+TV  SA IFKD+ ++GFW+ +W    +  +   R+M+D L  L R GKL  
Sbjct: 287 YGGMAKQPVTVPVSALIFKDVRVRGFWVTQWKRDNRHDDEALRHMLDELCILIRAGKLSA 346

Query: 348 DM-ELVPFNNFQTALSKAL 365
            +   V   +F+ AL  A+
Sbjct: 347 PICTQVQLQDFRKALENAM 365

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q28GQ2|MECR_XENTR Trans-2-enoyl-CoA reductase, mitochondrial OS=Xenopus tropicalis GN=mecr PE=2 SV=1

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 197/323 (60%), Gaps = 10/323 (3%)

Query: 26  WAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAA 85
           W G R       R FS+L +   + +VYE+ G P  V+++  +      +N+V VKMLAA
Sbjct: 2   WLGLRLFH----RPFSSLAA---RGLVYEKHGEPLQVLRLKNVNITHPADNEVRVKMLAA 54

Query: 86  PINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 145
           PINPSDIN ++G Y + P++PAVGG EGVG V  +G  V+ + PGDWV+P     GTW +
Sbjct: 55  PINPSDINMVQGTYALLPQLPAVGGNEGVGVVVEIGRHVSSMRPGDWVVPVDAGLGTWCT 114

Query: 146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205
             V  +    +V  D P+  AAT+ VNP TA R+L DF TL  GD+I+QN + S VGQ +
Sbjct: 115 EAVFSEDSLVRVPSDIPVAGAATVSVNPCTAYRLLSDFETLRPGDTIIQNASNSGVGQAV 174

Query: 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265
           IQIA   GI +IN++RDR       ++L+ LGAD V TE QL    +K L  N P P L 
Sbjct: 175 IQIATSLGITTINVVRDREDLSSLIQRLRDLGADHVITEEQLRKPEMKDLFKNCPRPRLA 234

Query: 266 FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK 325
            NCVGG S +++L+ L  GGTMVTYGGMSK+P+TV  SA IFK++ L GFW+ +W     
Sbjct: 235 LNCVGGKSTTEMLRHLDYGGTMVTYGGMSKQPVTVPVSALIFKNVKLCGFWVTQWKKERA 294

Query: 326 AT---ECRNMIDYLLCLAREGKL 345
            T   E   MI  L  L R GKL
Sbjct: 295 QTDREEIVKMIRDLCDLIRRGKL 317

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids (By similarity). Functions in pronephros development, regulating late differentiation of all pronephric tubule segments.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9V6U9|MECR_DROME Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2

 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/351 (42%), Positives = 210/351 (59%), Gaps = 5/351 (1%)

Query: 30  RRVQAQRVRA--FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPI 87
           RR    R+ A  +S  MS  +K++ Y + G P  V++++E    + K+N V VK+LAAPI
Sbjct: 3   RRGFLSRINAAQWSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPI 62

Query: 88  NPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYV 147
           NP+DIN I+G YPV+PK PAVGG E V EV  VG  V     G  VIP     GTW ++ 
Sbjct: 63  NPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHA 122

Query: 148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207
           V  +     VSK   +  AAT  VNP TA RML+DF  L  GD+++QNGA S VGQ + Q
Sbjct: 123 VYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQ 182

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267
           + R  GI+S+ I+RDR    E K+ L+ LGA EV TE+++   ++      L +P L FN
Sbjct: 183 LCRAWGINSVGIVRDRPEIAELKQMLQCLGATEVLTEAEIRTSDIFK-SGKLKKPRLAFN 241

Query: 268 CVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT 327
           CVGG SA++V + L  GG +VTYGGMS++P+TV+T   IFKD++ +GFW+ +W     ++
Sbjct: 242 CVGGKSATEVSRHLDNGGVLVTYGGMSREPVTVATGPLIFKDIAFRGFWMTRWSKENYSS 301

Query: 328 ECRN-MIDYLLCLAREGKL-KYDMELVPFNNFQTALSKALGLHGSQPKQVI 376
             R+ M   +  L  +GK    + E+VP   F+ A + AL   G   K+ I
Sbjct: 302 PERSKMFKEIFELMEQGKFVAPNHEMVPLAKFKDAAAAALSFKGFTGKKYI 352

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q54YT4|MECR_DICDI Trans-2-enoyl-CoA reductase, mitochondrial OS=Dictyostelium discoideum GN=mecr PE=3 SV=1

 Score =  248 bits (632), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 197/331 (59%), Gaps = 9/331 (2%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPV--EVKENDVCVKMLAAPINPSDINR 94
           VR +S      S++V     G P + +K IE   +  ++   DV V+ML APINP+D+N 
Sbjct: 11  VRRYST-----SRSVKIASHGSPSTALK-IENENITDKISNKDVLVEMLHAPINPADLNI 64

Query: 95  IEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-GTWQSYVVKDQSV 153
           I+G Y    +V  V G EGVG V  VGS VT L   D V+PS     G+W+S  V  +  
Sbjct: 65  IQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKENDLVVPSMKQHFGSWRSKGVWSEQQ 124

Query: 154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 213
             KV  D P EY +TI +NP TA  +L DF  L  GD I+QN + S+VG  +IQ+A+ RG
Sbjct: 125 LFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGDVIIQNASNSMVGLSVIQLAKARG 184

Query: 214 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS 273
           I +IN+IRD +  ++  ++LK LG D V +E  +     + L+++LP P L  N VGG S
Sbjct: 185 IKTINVIRDGSEFEDNVQRLKQLGGDIVVSEEYVRTPAFRKLISDLPSPKLALNAVGGQS 244

Query: 274 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI 333
           A+++ + L+  GT+VTYGGMS++P+T+ TS  IF+++ ++GFWL KW      +E +++ 
Sbjct: 245 ATELSRILADNGTLVTYGGMSREPVTIPTSQLIFRNIQIRGFWLNKWFEQHTDSEKQSVY 304

Query: 334 DYLLCLAREGKLKYDMELVPFNNFQTALSKA 364
           D +  L R+ + K  +E   F+ F  AL K+
Sbjct: 305 DAIFDLIRKKQFKLLIEKHKFSEFDQALLKS 335

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|O45903|MECR1_CAEEL Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=3 SV=1

 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/305 (43%), Positives = 187/305 (61%), Gaps = 15/305 (4%)

Query: 48  SKAVVYE-REGPPDSVIKMIELPPVEVKE----NDVCVKMLAAPINPSDINRIEGVYPVR 102
           ++ +VYE    PP++    I+L  V + +    + V V+ +AAPINP+D+N+I+GVYPV+
Sbjct: 17  TRQLVYEGYRNPPEA----IQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVK 72

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
           P +PAVGG EG G+V SVGS V+ +  GD VIP     GTW+   +  ++    +     
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           MEYAAT  VNP TA RML+DF  L  GD++ QNGA S VG+ +IQI R  GI ++N++R 
Sbjct: 133 MEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRS 192

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
           R   +E  ++LK LGADEV T+ +L  +  K      P   L  NCVGG S+  +   L 
Sbjct: 193 RDNLEELVKELKDLGADEVITQEELYSRKKK-----FPGVKLALNCVGGRSSLFLASLLD 247

Query: 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN-MIDYLLCLAR 341
            GG MVTYGGMSK+P+   T   IFKD+SL+GFW+ +W   +K+ E R+ M   L    +
Sbjct: 248 HGGCMVTYGGMSKQPVDCPTGPLIFKDISLRGFWMSRWYDIQKSPEKRHEMYQELAGWMK 307

Query: 342 EGKLK 346
            G++K
Sbjct: 308 SGEIK 312

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
255578755	379	zinc binding dehydrogenase, putative [Ri	0.994	0.992	0.779	1e-175
359479028	373	PREDICTED: probable trans-2-enoyl-CoA re	0.986	1.0	0.788	1e-172
239909313	380	trans-2-enoyl CoA reductase [Jatropha cu	0.997	0.992	0.785	1e-172
224120990	368	predicted protein [Populus trichocarpa]	0.904	0.929	0.825	1e-168
297746179	335	unnamed protein product [Vitis vinifera]	0.886	1.0	0.847	1e-168
118481570	368	unknown [Populus trichocarpa]	0.904	0.929	0.825	1e-168
449462097	369	PREDICTED: probable trans-2-enoyl-CoA re	0.915	0.937	0.791	1e-164
18408069	375	putative trans-2-enoyl-CoA reductase [Ar	0.904	0.912	0.783	1e-161
17064956	375	oxidoreductase of zinc-binding dehydroge	0.904	0.912	0.780	1e-160
297819102	376	oxidoreductase [Arabidopsis lyrata subsp	0.986	0.992	0.724	1e-158

>gi|255578755|ref|XP_002530235.1| zinc binding dehydrogenase, putative [Ricinus communis] gi|223530239|gb|EEF32141.1| zinc binding dehydrogenase, putative [Ricinus communis]

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/377 (77%), Positives = 336/377 (89%), Gaps = 1/377 (0%)

Query: 2   ALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDS 61
            + RS+A+K + +  S++ +F+L      RVQ Q +RAFSALMSPPSKA+VY++ G P+S
Sbjct: 4   TIMRSLAMKAL-KCPSSSFLFNLRQTHNPRVQTQVIRAFSALMSPPSKAIVYDQHGAPES 62

Query: 62  VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG 121
           V +++E+PPVEVK+ DVCVKMLAAPINPSDINRIEGVYPVRP VPAVGGYEGVGEV+SVG
Sbjct: 63  VTRVVEMPPVEVKDKDVCVKMLAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVHSVG 122

Query: 122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181
           SAV   +PGDWVIPSPP+ GTWQ+Y+V+DQSVWHK++KDSPM+YAATI VNPLTALRMLE
Sbjct: 123 SAVKDFSPGDWVIPSPPTFGTWQTYIVQDQSVWHKINKDSPMKYAATITVNPLTALRMLE 182

Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           DFTTLNSGDS+VQNGATSIVGQCIIQIA+  GIHSINI+RDR GSDEAKE LK LGADEV
Sbjct: 183 DFTTLNSGDSVVQNGATSIVGQCIIQIAKFHGIHSINILRDRPGSDEAKEFLKELGADEV 242

Query: 242 FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 301
           FTE QL VKNVKGLL NLPEPALGFNCVGGNSAS VLKFL QGGTMVTYGGMSKKP+TVS
Sbjct: 243 FTEGQLAVKNVKGLLTNLPEPALGFNCVGGNSASLVLKFLRQGGTMVTYGGMSKKPVTVS 302

Query: 302 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTAL 361
           TS+FIFKDLSL+GFWLQKW++S+KA ECRNMIDYLLCLA+EGKLKY+MELVPF++F  AL
Sbjct: 303 TSSFIFKDLSLRGFWLQKWMTSDKAKECRNMIDYLLCLAQEGKLKYEMELVPFDDFHVAL 362

Query: 362 SKALGLHGSQPKQVIKF 378
            KALG  GSQPKQV+KF
Sbjct: 363 DKALGKLGSQPKQVLKF 379

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479028|ref|XP_002284705.2| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial [Vitis vinifera]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/378 (78%), Positives = 326/378 (86%), Gaps = 5/378 (1%)

Query: 1   MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPD 60
           MAL R        R+   +S   L      R  +Q +RAFSA MSPPS AVVYE  GPP+
Sbjct: 1   MALVRLATA----RTHYGSSFLCLRSESLPRCWSQ-IRAFSAAMSPPSSAVVYEHHGPPE 55

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP VPAVGGYEGVGEV+S+
Sbjct: 56  SVTRVVELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPHVPAVGGYEGVGEVHSL 115

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GSAV  L+PGDWVIPSPPSSGTWQ+YVVK+QSVWHK++KD PMEYAAT+ +NPLTALRML
Sbjct: 116 GSAVKGLSPGDWVIPSPPSSGTWQTYVVKEQSVWHKINKDVPMEYAATVTINPLTALRML 175

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDF  LN GD+IVQNGATSIVGQCIIQ+AR RGIHSINIIRDR GSDE KEKLKGLGADE
Sbjct: 176 EDFGNLNPGDAIVQNGATSIVGQCIIQLARIRGIHSINIIRDRVGSDEVKEKLKGLGADE 235

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV 300
           VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA+ VLKFL QGGTMVTYGGMSKKPITV
Sbjct: 236 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSATLVLKFLRQGGTMVTYGGMSKKPITV 295

Query: 301 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360
           STS+FIFKDLSL+GFWLQKW+SS+KA E R MIDYLL L +EGK+KY+MELVPF+NF  A
Sbjct: 296 STSSFIFKDLSLRGFWLQKWMSSDKAKESRKMIDYLLGLTQEGKIKYEMELVPFSNFHAA 355

Query: 361 LSKALGLHGSQPKQVIKF 378
           L KALG  GSQPKQVIKF
Sbjct: 356 LDKALGKFGSQPKQVIKF 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239909313|gb|ACS32302.1| trans-2-enoyl CoA reductase [Jatropha curcas]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 297/378 (78%), Positives = 337/378 (89%), Gaps = 1/378 (0%)

Query: 1   MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPD 60
           M + RS A+K++N   S+  +F+L+W    R QAQ VR FSA MSPPSKAVVY+++GPPD
Sbjct: 4   MMMMRSTAMKVLNEPFSSL-LFNLKWGHIPRAQAQIVRTFSAFMSPPSKAVVYDQQGPPD 62

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++E+PPVEVK NDVCVKMLA+PINPSDINRIEGVYPVRP VPAVGGYEGVGEV+SV
Sbjct: 63  SVTRVVEVPPVEVKANDVCVKMLASPINPSDINRIEGVYPVRPSVPAVGGYEGVGEVHSV 122

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GSAV  L+PGDWVIPSPPS GTWQ+Y+V+DQSVWHK++K+SPMEYAAT+ VNPLTALRML
Sbjct: 123 GSAVKDLSPGDWVIPSPPSFGTWQTYIVQDQSVWHKINKESPMEYAATVTVNPLTALRML 182

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDFT+LNSGDS+VQNGATSIVGQC+IQIA+ RGI SINI+RDR GSDEAKE LK LGADE
Sbjct: 183 EDFTSLNSGDSVVQNGATSIVGQCVIQIAKFRGIRSINILRDRPGSDEAKETLKKLGADE 242

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV 300
           VFTESQLEVKNVKGLL NLPEPALGFNCVGGN+AS VLKFL QGGTMVTYGGMSKKP+TV
Sbjct: 243 VFTESQLEVKNVKGLLTNLPEPALGFNCVGGNAASLVLKFLRQGGTMVTYGGMSKKPVTV 302

Query: 301 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360
           STS+F FKDL+L+GFWLQKWL+SEKA ECRNMIDYL  LA+E KLKY+ME VPF+NF TA
Sbjct: 303 STSSFTFKDLTLRGFWLQKWLTSEKAKECRNMIDYLPSLAQEEKLKYEMEPVPFDNFHTA 362

Query: 361 LSKALGLHGSQPKQVIKF 378
           L KALG  GSQPKQV+KF
Sbjct: 363 LDKALGKLGSQPKQVLKF 380

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120990|ref|XP_002330876.1| predicted protein [Populus trichocarpa] gi|222872698|gb|EEF09829.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/343 (82%), Positives = 313/343 (91%), Gaps = 1/343 (0%)

Query: 37  VRAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI 95
           +RAFS+L+ SPPSKAVVYER GPPD+V ++IE+  VEVKE DVCVKM+AAPINPSDINRI
Sbjct: 26  IRAFSSLLTSPPSKAVVYERHGPPDAVTRVIEMEGVEVKEKDVCVKMMAAPINPSDINRI 85

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           EGVYPVRP +PA+GGYEGVGEV SVGSAV  L+PGDWVIPSPPSSGTWQ+Y+VK++SVWH
Sbjct: 86  EGVYPVRPPLPAIGGYEGVGEVLSVGSAVKHLSPGDWVIPSPPSSGTWQTYIVKEESVWH 145

Query: 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215
           K+SKDSP+EYAATI VNPLTALRML+DF TLNSGD IVQNGATSIVGQCIIQ+ARHRGIH
Sbjct: 146 KISKDSPIEYAATITVNPLTALRMLQDFVTLNSGDCIVQNGATSIVGQCIIQLARHRGIH 205

Query: 216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS 275
           SINIIRDR GSDEAKE LK LGADEVFTESQLEVKN+KGLL NLPEPALGFNCVGGNSAS
Sbjct: 206 SINIIRDRVGSDEAKEMLKRLGADEVFTESQLEVKNIKGLLTNLPEPALGFNCVGGNSAS 265

Query: 276 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 335
            VLKFL  GGTMVTYGGMSKKPIT+STS+FIFKDLSL+GFWLQK ++S+K  ECRN ID+
Sbjct: 266 LVLKFLRHGGTMVTYGGMSKKPITISTSSFIFKDLSLRGFWLQKLMNSDKVNECRNSIDH 325

Query: 336 LLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           LLCLAREGKLKY+MELV F +F TAL KALG  GSQPKQV+KF
Sbjct: 326 LLCLAREGKLKYEMELVSFGDFHTALDKALGKLGSQPKQVLKF 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746179|emb|CBI16235.3| unnamed protein product [Vitis vinifera]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/335 (84%), Positives = 308/335 (91%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MSPPS AVVYE  GPP+SV +++ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP
Sbjct: 1   MSPPSSAVVYEHHGPPESVTRVVELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 60

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM 163
            VPAVGGYEGVGEV+S+GSAV  L+PGDWVIPSPPSSGTWQ+YVVK+QSVWHK++KD PM
Sbjct: 61  HVPAVGGYEGVGEVHSLGSAVKGLSPGDWVIPSPPSSGTWQTYVVKEQSVWHKINKDVPM 120

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
           EYAAT+ +NPLTALRMLEDF  LN GD+IVQNGATSIVGQCIIQ+AR RGIHSINIIRDR
Sbjct: 121 EYAATVTINPLTALRMLEDFGNLNPGDAIVQNGATSIVGQCIIQLARIRGIHSINIIRDR 180

Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283
            GSDE KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA+ VLKFL Q
Sbjct: 181 VGSDEVKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSATLVLKFLRQ 240

Query: 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG 343
           GGTMVTYGGMSKKPITVSTS+FIFKDLSL+GFWLQKW+SS+KA E R MIDYLL L +EG
Sbjct: 241 GGTMVTYGGMSKKPITVSTSSFIFKDLSLRGFWLQKWMSSDKAKESRKMIDYLLGLTQEG 300

Query: 344 KLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           K+KY+MELVPF+NF  AL KALG  GSQPKQVIKF
Sbjct: 301 KIKYEMELVPFSNFHAALDKALGKFGSQPKQVIKF 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481570|gb|ABK92727.1| unknown [Populus trichocarpa]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/343 (82%), Positives = 312/343 (90%), Gaps = 1/343 (0%)

Query: 37  VRAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI 95
           +RAFS+L+ SPPSKAVVYER GPPD+V ++IE+  VEVKE DVCVKM+AAPINPSDINRI
Sbjct: 26  IRAFSSLLTSPPSKAVVYERHGPPDAVTRVIEMEGVEVKEKDVCVKMMAAPINPSDINRI 85

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           EGVYPVRP +PA+GGYEGVGEV SVGSAV  L+PGDWVIPSPPSSGTWQ+Y+VK++SVWH
Sbjct: 86  EGVYPVRPPLPAIGGYEGVGEVLSVGSAVKHLSPGDWVIPSPPSSGTWQTYIVKEESVWH 145

Query: 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215
           K+SKDSP+EYAATI VNPLTALRML+DF TLNSGD IVQNGATSIVGQCIIQ+ARHRGIH
Sbjct: 146 KISKDSPIEYAATITVNPLTALRMLQDFVTLNSGDCIVQNGATSIVGQCIIQLARHRGIH 205

Query: 216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS 275
           SINIIRDR GSDEAKE LK LGADEVFTESQLEVKN+KGLL NLPEPALGFNCVGGNSAS
Sbjct: 206 SINIIRDRVGSDEAKEMLKRLGADEVFTESQLEVKNIKGLLTNLPEPALGFNCVGGNSAS 265

Query: 276 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 335
            VLKFL  GGTMVTYGGMSKKPIT STS+FIFKDLSL+GFWLQK ++S+K  ECRN ID+
Sbjct: 266 LVLKFLRHGGTMVTYGGMSKKPITTSTSSFIFKDLSLRGFWLQKLMNSDKVNECRNSIDH 325

Query: 336 LLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           LLCLAREGKLKY+MELV F +F TAL KALG  GSQPKQV+KF
Sbjct: 326 LLCLAREGKLKYEMELVSFGDFHTALDKALGKLGSQPKQVLKF 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462097|ref|XP_004148778.1| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like [Cucumis sativus] gi|449527392|ref|XP_004170695.1| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like [Cucumis sativus]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 274/346 (79%), Positives = 314/346 (90%)

Query: 33  QAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI 92
            ++ +RAFS +MSPPS AVVY+  GPPD+V ++I LPPVE+K NDVCVKMLAAPINPSDI
Sbjct: 24  NSRTIRAFSVIMSPPSTAVVYDLHGPPDTVTRVINLPPVEMKANDVCVKMLAAPINPSDI 83

Query: 93  NRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQS 152
           NRIEGVYPVRP+VPAVGGYEGVGEV+SVG+AV  L+PGDWVIPSPPSSGTWQ+YVVKDQS
Sbjct: 84  NRIEGVYPVRPEVPAVGGYEGVGEVHSVGNAVQGLSPGDWVIPSPPSSGTWQTYVVKDQS 143

Query: 153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR 212
           VWHK++K+ PMEYAAT+ VNPLTALRMLEDF +L +GDS+VQNGATSIVGQCIIQ+A+ R
Sbjct: 144 VWHKINKEVPMEYAATVTVNPLTALRMLEDFVSLKAGDSVVQNGATSIVGQCIIQLAKIR 203

Query: 213 GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN 272
           GIHSINIIRDRAGSD++KEKLK LGADE+F+ESQLEVKNVK LLANLPEPALGFNCVGGN
Sbjct: 204 GIHSINIIRDRAGSDKSKEKLKRLGADEIFSESQLEVKNVKSLLANLPEPALGFNCVGGN 263

Query: 273 SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 332
           +A+ VLKFL QGGTMVTYGGMSKKPITVSTS+FIFKD+SL+GFWLQK +  +KA E R +
Sbjct: 264 AATLVLKFLRQGGTMVTYGGMSKKPITVSTSSFIFKDVSLRGFWLQKLMGIDKANESRKL 323

Query: 333 IDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           IDYLL LAR+ KLKY+ME+VPF+NF  AL+KALG  GSQPKQVIKF
Sbjct: 324 IDYLLDLARQEKLKYEMEVVPFDNFHIALNKALGKQGSQPKQVIKF 369

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408069|ref|NP_566881.1| putative trans-2-enoyl-CoA reductase [Arabidopsis thaliana] gi|62900587|sp|Q8LCU7.1|MECR_ARATH RecName: Full=Probable trans-2-enoyl-CoA reductase, mitochondrial; Flags: Precursor gi|21592515|gb|AAM64465.1| nuclear receptor binding factor-like protein [Arabidopsis thaliana] gi|332644550|gb|AEE78071.1| putative trans-2-enoyl-CoA reductase [Arabidopsis thaliana]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 268/342 (78%), Positives = 301/342 (88%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           VLK+L +GGTMVTYGGMSKKPITVST++FIFKDL+L+GFWLQ WLS  K  ECR MIDYL
Sbjct: 274 VLKYLREGGTMVTYGGMSKKPITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYL 333

Query: 337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           L LAR+GKLKY+ ELVPF  F  AL KALG  G QPKQVI F
Sbjct: 334 LGLARDGKLKYETELVPFEEFPVALDKALGKLGRQPKQVITF 375

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17064956|gb|AAL32632.1| oxidoreductase of zinc-binding dehydrogenase family [Arabidopsis thaliana] gi|21387141|gb|AAM47974.1| oxidoreductase of zinc-binding dehydrogenase family [Arabidopsis thaliana]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/342 (78%), Positives = 301/342 (88%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           VLK+L +GGTMVTYGGMSK+PITVST++FIFKDL+L+GFWLQ WLS  K  ECR MIDYL
Sbjct: 274 VLKYLREGGTMVTYGGMSKEPITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYL 333

Query: 337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           L LAR+GKLKY+ ELVPF  F  AL KALG  G QPKQVI F
Sbjct: 334 LGLARDGKLKYETELVPFEEFPVALDKALGKLGRQPKQVITF 375

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819102|ref|XP_002877434.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297323272|gb|EFH53693.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/378 (72%), Positives = 312/378 (82%), Gaps = 5/378 (1%)

Query: 2   ALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSA-LMSPPSKAVVYEREGPPD 60
           AL +SVA     R++  +S  S       +      ++FS  +MSPPSKA+VYE  G PD
Sbjct: 3   ALMKSVA----GRALKFSSTASFRSNRHVKTPTLCTKSFSTVIMSPPSKAIVYEEHGSPD 58

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVYPVRP VPAVGGYEGVGEVY+V
Sbjct: 59  SVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVYAV 118

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK+ K  PMEYAATI VNPLTALRML
Sbjct: 119 GSKVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDKACPMEYAATITVNPLTALRML 178

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+IRDRAGSDEA+E+LK LGAD 
Sbjct: 179 EDFVVLNSGDSVVQNGATSIVGQCVIQLARLRGISTINLIRDRAGSDEAREQLKALGADG 238

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV 300
           VF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS VLK+L +GGTMVTYGGMSKKPITV
Sbjct: 239 VFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASLVLKYLREGGTMVTYGGMSKKPITV 298

Query: 301 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360
           ST++FIFKDL+L+GFWLQ WLS  K  ECR MIDYLL LA++GKLKY+ ELVPF+ F  A
Sbjct: 299 STTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGLAQDGKLKYETELVPFDEFPVA 358

Query: 361 LSKALGLHGSQPKQVIKF 378
           L KALG  G QPKQVI F
Sbjct: 359 LGKALGKLGRQPKQVITF 376

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
TAIR|locus:2102664	375	AT3G45770 [Arabidopsis thalian	0.896	0.904	0.743	8.5e-136
RGD|3208	373	Mecr "mitochondrial trans-2-en	0.859	0.871	0.440	4.4e-68
UNIPROTKB|Q9Z311	373	Mecr "Trans-2-enoyl-CoA reduct	0.859	0.871	0.440	4.4e-68
MGI|MGI:1349441	373	Mecr "mitochondrial trans-2-en	0.888	0.900	0.424	4e-67
UNIPROTKB|Q9BV79	373	MECR "Trans-2-enoyl-CoA reduct	0.862	0.873	0.420	1.7e-66
UNIPROTKB|E2R1T2	367	MECR "Uncharacterized protein"	0.865	0.891	0.410	7.6e-64
UNIPROTKB|Q28GQ2	350	mecr "Trans-2-enoyl-CoA reduct	0.843	0.911	0.420	2.6e-63
UNIPROTKB|Q7YS70	373	MECR "Trans-2-enoyl-CoA reduct	0.851	0.863	0.422	5.4e-63
ZFIN|ZDB-GENE-050417-399	377	mecr "mitochondrial trans-2-en	0.859	0.862	0.410	3.4e-61
FB|FBgn0033883	357	CG16935 [Drosophila melanogast	0.886	0.938	0.4	1.5e-60

TAIR|locus:2102664 AT3G45770 [Arabidopsis thaliana (taxid:3702)]

 Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
 Identities = 252/339 (74%), Positives = 281/339 (82%)

Query:    40 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
             FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVY
Sbjct:    37 FSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVY 96

Query:   100 PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159
             PVRP VP                     +PGDWVIPSPPSSGTWQ+YVVK++SVWHK+ K
Sbjct:    97 PVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDK 156

Query:   160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
             + PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+
Sbjct:   157 ECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGISTINL 216

Query:   220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
             IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS VLK
Sbjct:   217 IRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASLVLK 276

Query:   280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339
             +L +GGTMVTYGGMSKKPITVST++FIFKDL+L+GFWLQ WLS  K  ECR MIDYLL L
Sbjct:   277 YLREGGTMVTYGGMSKKPITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGL 336

Query:   340 AREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
             AR+GKLKY+ ELVPF  F  AL KALG  G QPKQVI F
Sbjct:   337 ARDGKLKYETELVPFEEFPVALDKALGKLGRQPKQVITF 375

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

RGD|3208 Mecr "mitochondrial trans-2-enoyl-CoA reductase" [Rattus norvegicus (taxid:10116)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 145/329 (44%), Positives = 199/329 (60%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     V 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             +IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
             + L+ GGTMVTYGGM+K+P+T S S  IFKDL L+GFWL +W  +    E + +I  +LC
Sbjct:   274 RHLAPGGTMVTYGGMAKQPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELI-LILC 332

Query:   339 -LAREGKLKYDM-ELVPFNNFQTALSKAL 365
              L R+G+L       +P  ++Q AL  ++
Sbjct:   333 NLIRQGQLTAPAWSGIPLQDYQQALEASM 361

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA

GO:0006631 "fatty acid metabolic process" evidence=IEA;ISO;ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO;ISS

UNIPROTKB|Q9Z311 Mecr "Trans-2-enoyl-CoA reductase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 145/329 (44%), Positives = 199/329 (60%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     V 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             +IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
             + L+ GGTMVTYGGM+K+P+T S S  IFKDL L+GFWL +W  +    E + +I  +LC
Sbjct:   274 RHLAPGGTMVTYGGMAKQPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELI-LILC 332

Query:   339 -LAREGKLKYDM-ELVPFNNFQTALSKAL 365
              L R+G+L       +P  ++Q AL  ++
Sbjct:   333 NLIRQGQLTAPAWSGIPLQDYQQALEASM 361

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1349441 Mecr "mitochondrial trans-2-enoyl-CoA reductase" [Mus musculus (taxid:10090)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 144/339 (42%), Positives = 201/339 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SAL  P   +A+VY   G P  V+++  L    V+ +DV V+MLAAPINPSDIN I+G 
Sbjct:    34 YSALSEPSRVRALVYGNHGDPAKVVQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     + 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA    + +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VVRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKTIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
             + L+ GGTMVTYGGM+K+P+T S S  IFKDL L+GFWL +W  +    E + +I  L  
Sbjct:   274 RHLAPGGTMVTYGGMAKQPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLCN 333

Query:   339 LAREGKLKY-DMELVPFNNFQTALSKALGLHGSQPKQVI 376
             L R+G+L       VP   +Q AL  ++    S  KQ++
Sbjct:   334 LIRQGRLTAPSCSEVPLQGYQQALEASMKPFVSS-KQIL 371

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=ISO

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=ISO

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|Q9BV79 MECR "Trans-2-enoyl-CoA reductase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 138/328 (42%), Positives = 195/328 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y   P++P                  T L PGDWVIP+    GTW++  V  +    +V 
Sbjct:    94 YGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
              D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 SDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct:   214 VVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELL 273

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
             + L++GGTMVTYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  
Sbjct:   274 RQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 333

Query:   339 LAREGKLKYDM-ELVPFNNFQTALSKAL 365
             L R G+L       VP  ++Q+AL  ++
Sbjct:   334 LIRRGQLTAPACSQVPLQDYQSALEASM 361

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E2R1T2 MECR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 135/329 (41%), Positives = 191/329 (58%)

Query:    49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
             +A++Y   G P  V+++  L    V  +DV VKMLAAPINPSDIN I+G Y + PK+P  
Sbjct:    37 RALIYGHHGDPAKVVELKNLELAAVGGSDVHVKMLAAPINPSDINMIQGNYGLLPKLPAV 96

Query:   109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
                             T + PGDWVIP+    GTW++  V  +     V  D P++ AAT
Sbjct:    97 GGNEGVGQVVAVGGSVTGVKPGDWVIPANAGLGTWRTEAVFSEEALIGVPSDIPLQSAAT 156

Query:   169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             + VNP TA RML DF  L  GD ++QN + S VGQ +IQIA   G+ +IN++RDR    E
Sbjct:   157 LGVNPCTAYRMLMDFEQLQPGDWVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDLQE 216

Query:   229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288
               ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L+ GGTMV
Sbjct:   217 LTDRLKSLGAEHVLTEEELRKHEMKNFFKDMPQPRLALNCVGGKSSTELLRHLAPGGTMV 276

Query:   289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348
             TYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  L   G+L   
Sbjct:   277 TYGGMAKQPVIASVSQLIFKDLKLRGFWLSQWKKDHSPAQFKELILTLCGLIGRGQLTAP 336

Query:   349 M-ELVPFNNFQTALSKALGLHGSQPKQVI 376
                 VP  +++ AL  ++    S  KQ++
Sbjct:   337 ACSEVPLQDYERALEASMQPFVSS-KQIL 364

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q28GQ2 mecr "Trans-2-enoyl-CoA reductase, mitochondrial" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 137/326 (42%), Positives = 188/326 (57%)

Query:    40 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
             FS+L +   + +VYE+ G P  V+++  +      +N+V VKMLAAPINPSDIN ++G Y
Sbjct:    12 FSSLAA---RGLVYEKHGEPLQVLRLKNVNITHPADNEVRVKMLAAPINPSDINMVQGTY 68

Query:   100 PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159
              + P++P                  + + PGDWV+P     GTW +  V  +    +V  
Sbjct:    69 ALLPQLPAVGGNEGVGVVVEIGRHVSSMRPGDWVVPVDAGLGTWCTEAVFSEDSLVRVPS 128

Query:   160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
             D P+  AAT+ VNP TA R+L DF TL  GD+I+QN + S VGQ +IQIA   GI +IN+
Sbjct:   129 DIPVAGAATVSVNPCTAYRLLSDFETLRPGDTIIQNASNSGVGQAVIQIATSLGITTINV 188

Query:   220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
             +RDR       ++L+ LGAD V TE QL    +K L  N P P L  NCVGG S +++L+
Sbjct:   189 VRDREDLSSLIQRLRDLGADHVITEEQLRKPEMKDLFKNCPRPRLALNCVGGKSTTEMLR 248

Query:   280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL--L 337
              L  GGTMVTYGGMSK+P+TV  SA IFK++ L GFW+ +W      T+   ++  +  L
Sbjct:   249 HLDYGGTMVTYGGMSKQPVTVPVSALIFKNVKLCGFWVTQWKKERAQTDREEIVKMIRDL 308

Query:   338 C-LAREGKLKYDMELV-PFNNFQTAL 361
             C L R GKL        P  +F  AL
Sbjct:   309 CDLIRRGKLVPPPSTQRPLEDFSRAL 334

GO:0039020 "pronephric nephron tubule development" evidence=IMP

UNIPROTKB|Q7YS70 MECR "Trans-2-enoyl-CoA reductase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 137/324 (42%), Positives = 187/324 (57%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             FSA   P   +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G 
Sbjct:    34 FSASAEPSRVRALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + P++P                  T + PGDWVIP+ P  GTW++  V  +     V 
Sbjct:    94 YGLLPQLPAVGGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
              D P++ AAT+ VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN
Sbjct:   154 SDIPLQSAATLGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RD     +  + LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct:   214 VLRDTPDLQKLTDTLKNLGANHVVTEEELRKPEMKSFFKDVPQPRLALNCVGGKSSTELL 273

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
             + L+ GGTMVTYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  
Sbjct:   274 RHLAPGGTMVTYGGMAKQPVIASVSQLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 333

Query:   339 LAREGKLKYDM-ELVPFNNFQTAL 361
             L R G+L       VP  ++  AL
Sbjct:   334 LIRRGQLTAPACSEVPLQDYLCAL 357

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050417-399 mecr "mitochondrial trans-2-enoyl-CoA reductase" [Danio rerio (taxid:7955)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 135/329 (41%), Positives = 189/329 (57%)

Query:    50 AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXX 109
             A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++P   
Sbjct:    47 ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVG 106

Query:   110 XXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
                              L  GDWVIP     GTW++  V        + KD P+  AAT+
Sbjct:   107 GNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATL 166

Query:   170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
              VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR    + 
Sbjct:   167 GVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDRPDLRQL 226

Query:   230 KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVT 289
              ++L  +GA  V TE  L    +K L  + P P L  N VGG SA+++L+ L  GG++VT
Sbjct:   227 SDRLTAMGATHVITEETLRRPEMKELFKSCPRPKLALNGVGGKSATELLRHLQSGGSLVT 286

Query:   290 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE--CRNMIDYLLCLAREGKLKY 347
             YGGM+K+P+TV  SA IFKD+ ++GFW+ +W    +  +   R+M+D L  L R GKL  
Sbjct:   287 YGGMAKQPVTVPVSALIFKDVRVRGFWVTQWKRDNRHDDEALRHMLDELCILIRAGKLSA 346

Query:   348 DM-ELVPFNNFQTALSKALGLHGSQPKQV 375
              +   V   +F+ AL  A+  + S  KQV
Sbjct:   347 PICTQVQLQDFRKALENAMKPYVST-KQV 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0039020 "pronephric nephron tubule development" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

FB|FBgn0033883 CG16935 [Drosophila melanogaster (taxid:7227)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 136/340 (40%), Positives = 196/340 (57%)

Query:    40 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
             +S  MS  +K++ Y + G P  V++++E    + K+N V VK+LAAPINP+DIN I+G Y
Sbjct:    15 WSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPINPADINTIQGKY 74

Query:   100 PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159
             PV+PK P                       G  VIP     GTW ++ V  +     VSK
Sbjct:    75 PVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSK 134

Query:   160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
                +  AAT  VNP TA RML+DF  L  GD+++QNGA S VGQ + Q+ R  GI+S+ I
Sbjct:   135 KVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGI 194

Query:   220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-KGLLANLPEPALGFNCVGGNSASKVL 278
             +RDR    E K+ L+ LGA EV TE+++   ++ K     L +P L FNCVGG SA++V 
Sbjct:   195 VRDRPEIAELKQMLQCLGATEVLTEAEIRTSDIFKS--GKLKKPRLAFNCVGGKSATEVS 252

Query:   279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN-MIDYLL 337
             + L  GG +VTYGGMS++P+TV+T   IFKD++ +GFW+ +W     ++  R+ M   + 
Sbjct:   253 RHLDNGGVLVTYGGMSREPVTVATGPLIFKDIAFRGFWMTRWSKENYSSPERSKMFKEIF 312

Query:   338 CLAREGK-LKYDMELVPFNNFQTALSKALGLHGSQPKQVI 376
              L  +GK +  + E+VP   F+ A + AL   G   K+ I
Sbjct:   313 ELMEQGKFVAPNHEMVPLAKFKDAAAAALSFKGFTGKKYI 352

GO:0008270 "zinc ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=ISS

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0005875 "microtubule associated complex" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GQN8	MECR_DANRE	1, ., 3, ., 1, ., 3, 8	0.4451	0.8359	0.8381	yes	no
Q6CIR6	ETR1_KLULA	1, ., 3, ., 1, ., 3, 8	0.3630	0.8201	0.8115	yes	no
Q9Z311	MECR_RAT	1, ., 3, ., 1, ., 3, 8	0.4716	0.8809	0.8927	yes	no
Q9V6U9	MECR_DROME	1, ., 3, ., 1, ., 3, 8	0.4273	0.9153	0.9691	yes	no
Q9BV79	MECR_HUMAN	1, ., 3, ., 1, ., 3, 8	0.4622	0.8386	0.8498	yes	no
Q7YS70	MECR_BOVIN	1, ., 3, ., 1, ., 3, 8	0.4649	0.8280	0.8391	yes	no
Q757U3	ETR1_ASHGO	1, ., 3, ., 1, ., 3, 8	0.3545	0.8095	0.8138	yes	no
Q54YT4	MECR_DICDI	1, ., 3, ., 1, ., 3, 8	0.4018	0.8518	0.92	yes	no
Q10488	ETR1_SCHPO	1, ., 3, ., 1, ., 3, 8	0.3712	0.8888	0.9032	yes	no
Q9DCS3	MECR_MOUSE	1, ., 3, ., 1, ., 3, 8	0.4416	0.9391	0.9517	yes	no
Q28GQ2	MECR_XENTR	1, ., 3, ., 1, ., 3, 8	0.4643	0.8280	0.8942	yes	no
Q8LCU7	MECR_ARATH	1, ., 3, ., 1, ., 3, 8	0.7836	0.9047	0.912	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.921
3rd Layer	1.3.1.38	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00024445001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (373 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00019100001	SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (338 aa)						•			0.899
	GSVIVG00009528001	SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (256 aa)						•			0.899
	GSVIVG00001357001	SubName- Full=Chromosome undetermined scaffold_116, whole genome shotgun sequence; Flags- Fragm [...] (176 aa)				•					0.466

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	378
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-153
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-90
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-60
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-57
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-47
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-41
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	6e-38
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-35
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-28
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-28
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-28
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-27
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-27
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	4e-25
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-23
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-22
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	7e-22
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	5e-21
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	3e-20
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	3e-20
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-19
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-19
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	5e-19
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	5e-18
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	4e-17
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	5e-17
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-16
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-16
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-15
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-15
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	3e-15
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-15
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	6e-15
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	9e-15
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	9e-15
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-14
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-14
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-14
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-14
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-14
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-14
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-14
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-13
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	4e-13
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	7e-13
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-12
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-12
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	9e-12
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-11
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-11
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	4e-11
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	4e-11
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-11
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	9e-11
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-10
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	3e-10
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-10
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	8e-10
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	8e-10
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-10
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-09
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-09
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	3e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-09
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-09
cd05281	341	cd05281, TDH, Threonine dehydrogenase	5e-09
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	7e-09
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	9e-09
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-08
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-08
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-08
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	3e-08
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	4e-08
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-08
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	1e-07
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-07
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-07
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-07
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-07
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	6e-07
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	6e-07
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-07
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-06
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	4e-06
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	5e-06
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	5e-06
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	9e-06
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-05
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-05
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	5e-05
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-05
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-04
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-04
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-04
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	4e-04
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	6e-04
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	0.002
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	0.002

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  434 bits (1119), Expect = e-153
 Identities = 168/342 (49%), Positives = 212/342 (61%), Gaps = 12/342 (3%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK-- 104
           +KA+VY   G P  V+++           N+V VKMLAAPINP+DIN+I+GVYP++P   
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 105 --VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
              PAVGG EGVGEV  VGS V  L PGDWVIP  P  GTW+++ V       KV  D  
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVD 120

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
            E AAT+ VNP TA R+LEDF  L  GD ++QNGA S VGQ +IQ+A+  GI +IN++RD
Sbjct: 121 PEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRD 180

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP--EPALGFNCVGGNSASKVLKF 280
           R   +E KE+LK LGAD V TE +L       LL + P   P L  NCVGG SA+++ + 
Sbjct: 181 RPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARL 240

Query: 281 LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340
           LS GGTMVTYGGMS +P+TV TS  IFKD++L+GFWL +WL      E  +M++ L  L 
Sbjct: 241 LSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELI 300

Query: 341 REGKLKYDM----ELVPFNNFQTALSKALGLHGSQPKQVIKF 378
           REGKLK          P   F+ AL+ AL   G   KQV+  
Sbjct: 301 REGKLKAPPVEKVTDDPLEEFKDALANALKGGGG-GKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  275 bits (705), Expect = 1e-90
 Identities = 125/317 (39%), Positives = 174/317 (54%), Gaps = 9/317 (2%)

Query: 51  VVYEREGPPDS-VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           VVY + G P   V++++ LP       +V V+MLAAPINPSD+  I G Y  RP +PAV 
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVP 60

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
           G EGVG V  VGS V+ L  G  V+P     GTWQ YVV        V      E AA +
Sbjct: 61  GNEGVGVVVEVGSGVSGLLVGQRVLP-LGGEGTWQEYVVAPADDLIPVPDSISDEQAAML 119

Query: 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
            +NPLTA  ML ++  L  GD ++QN A S VG+ +IQ+A+  G  +IN++R     DE 
Sbjct: 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR----RDEQ 175

Query: 230 KEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288
            E+LK LGADEV   S  +  + VK          L  + VGG SA+++ + L  GGT+V
Sbjct: 176 VEELKALGADEVIDSSPEDLAQRVKEAT-GGAGARLALDAVGGESATRLARSLRPGGTLV 234

Query: 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348
            YG +S +P+    S FIFKD++++GFWL++WL S      +     ++ L   G L   
Sbjct: 235 NYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP 294

Query: 349 -MELVPFNNFQTALSKA 364
                P  +F+ A++ A
Sbjct: 295 VGAKFPLEDFEEAVAAA 311

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  197 bits (503), Expect = 2e-60
 Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 10/306 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V+ + G P  V+++ E+P       +V V+   +PI+  D+  I G Y  +P++PA+
Sbjct: 2   RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAI 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG E VG V +VG  V  L  G  V  +P   GTW  Y V        +      E AA 
Sbjct: 62  GGSEAVGVVDAVGEGVKGLQVGQRVAVAP-VHGTWAEYFVAPADGLVPLPDGISDEVAAQ 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +I  PL+AL ML DF  +  G  ++QN A   VG+ +  +A  RGI+ IN++R     D 
Sbjct: 121 LIAMPLSAL-MLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR----RDA 175

Query: 229 AKEKLKGLGADEVF-TESQLEVKNVKGLLANLPEPAL-GFNCVGGNSASKVLKFLSQGGT 286
              +L+ LG   V  TE       V+        P     + VGG  A ++L  L +GGT
Sbjct: 176 GVAELRALGIGPVVSTEQPGWQDKVREAAGG--APISVALDSVGGKLAGELLSLLGEGGT 233

Query: 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
           +V++G MS +P+ +S+   IFK  +++GFW  +W         + MI  LL LA +G+L 
Sbjct: 234 LVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLL 293

Query: 347 YDMELV 352
             +E V
Sbjct: 294 LPVEAV 299

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  189 bits (481), Expect = 4e-57
 Identities = 99/335 (29%), Positives = 151/335 (45%), Gaps = 15/335 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV E  G P+ V+K++E+P  E    +V V++ AA +NP D+   +G+ P    +P +
Sbjct: 2   KAVVVEEFGGPE-VLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            G E  G V +VGS VT    GD V         G +  YVV        +      E A
Sbjct: 61  PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEA 120

Query: 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 226
           A + +  LTA   L D   L  G++++ +GA   VG   IQ+A+  G   + +      S
Sbjct: 121 AALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAV----VSS 176

Query: 227 DEAKEKLKGLGADEVFTES-QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG 285
            E  E LK LGAD V     +  V+ V+ L        +  + VGG++ +  L  L+ GG
Sbjct: 177 SEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPGG 235

Query: 286 TMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK 344
            +V+ G +S  P + ++    + K L+L+G      L S         +  L  L   GK
Sbjct: 236 RLVSIGALSGGPPVPLNLLPLLGKRLTLRGV----TLGSRDPEALAEALAELFDLLASGK 291

Query: 345 LKYDMELV-PFNNFQTALSKALGLHGSQPKQVIKF 378
           LK  ++ V P      A +  L    +  K V+K 
Sbjct: 292 LKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score =  162 bits (413), Expect = 4e-47
 Identities = 93/287 (32%), Positives = 140/287 (48%), Gaps = 15/287 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEV---KENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KA++ E  G P   +K + LP  EV      +V +K+ AAPINPSD+  ++G Y     +
Sbjct: 2   KALLLEEYGKP-LEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKAL 60

Query: 106 PAVGGYEGVGEVYSVG-SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
           P   G+EG G V + G   + +   G  V     S GT+  Y V D      +      E
Sbjct: 61  PVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDS-IVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
             A+  VNPLTAL MLE  T    G   +V   A S +G+ ++++ +  GI  INI+R  
Sbjct: 121 QGASSFVNPLTALGMLE--TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVR-- 176

Query: 224 AGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
               E  + LK +GA+ V   S  + ++++K L+A L    + F+ VGG    ++L  + 
Sbjct: 177 --RKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKL-NATIFFDAVGGGLTGQILLAMP 233

Query: 283 QGGTMVTYGGMSKKPIT-VSTSAFIFKDLSLKGFWLQKWLSSEKATE 328
            G T+  YG +S K    +     IFK+ S++GFWL  WL       
Sbjct: 234 YGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEV 280

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  146 bits (370), Expect = 2e-41
 Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 29/263 (11%)

Query: 77  DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           +V V++ AA +  +D++   G YP  PK+P + G+EG G V  VG  VT +  GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 137 PPSS----------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174
           P                         G +  YVV        +     +E AA +     
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 234
           TA   L     L  GD+++  GA   VG    Q+A+  G   I        SDE  E  K
Sbjct: 121 TAYHALRRAGVLKPGDTVLVLGA-GGVGLLAAQLAKAAGARVIVT----DRSDEKLELAK 175

Query: 235 GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 293
            LGAD V    + +++    L        +  + VGG    ++ L+ L  GG +V  GG 
Sbjct: 176 ELGADHVIDYKEEDLEEELRLTGG-GGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGT 234

Query: 294 SKKPITVSTSAFIFKDLSLKGFW 316
           S  P        +FK+L++ G  
Sbjct: 235 SGGPPLDDLRRLLFKELTIIGST 257

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  138 bits (349), Expect = 6e-38
 Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 16/246 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
           KAV     G P+ V+++ ++P  E    +V VK+ AA +NP D+   EG+      +  P
Sbjct: 2   KAVRIHEYGGPE-VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            + G++  G V +VG  VT    GD V         G +  YVV           +   E
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + +  LTA + L +   L +G +++ +GA   VG   +Q+A+ RG   I       
Sbjct: 121 EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIAT----- 175

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKFLSQ 283
            S    + L+ LGADEV     ++        A  P       + VGG + ++ L  +  
Sbjct: 176 ASAANADFLRSLGADEV-----IDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP 230

Query: 284 GGTMVT 289
           GG +V+
Sbjct: 231 GGRLVS 236

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  131 bits (332), Expect = 2e-35
 Identities = 94/309 (30%), Positives = 143/309 (46%), Gaps = 23/309 (7%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            +AV + + G P+ V+++ ELP       +V +++ A  +N +D     G Y   P +PA
Sbjct: 1   MRAVRFHQFGGPE-VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPA 59

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGTWQSY----VVKDQSVWHKVSKDSP 162
             GYE  G V +VG+ VT  A GD V   P    G + +Y    +V   +V       S 
Sbjct: 60  RLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSF 119

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +E AA + +  LTA   L +   L  GDS++   A+S VG   IQIA   G   I   R 
Sbjct: 120 VE-AAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTR- 177

Query: 223 RAGSDEAKEKLKGLGADEV-FTESQLEVKNVK----GLLANLPEPALGFNCVGGNSASKV 277
              + E ++ L  LGA  V  T+ +  V  V     G   ++      F+ VGG   +K+
Sbjct: 178 ---TSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVV-----FDPVGGPQFAKL 229

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 337
              L+ GGT+V YG +S +P      A + K L+ +G+ L +     +A   R  I ++L
Sbjct: 230 ADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEAR--RRAIAFIL 287

Query: 338 CLAREGKLK 346
                G LK
Sbjct: 288 DGLASGALK 296

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  112 bits (282), Expect = 4e-28
 Identities = 77/272 (28%), Positives = 116/272 (42%), Gaps = 31/272 (11%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV    G P  V++  +LP  E   ++V V++ AA +N  D+    G+  ++  +P +
Sbjct: 2   KAVVIRGHGGP-EVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------GT 142
            G +G G V +VG  VT + PG  V+  P  S                          G 
Sbjct: 61  LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGG 120

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YV         +  +   E AA   +  LTA  ML     L  G++++ +GA S VG
Sbjct: 121 YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP 262
              IQIA+  G   I      AGS++  E+ K LGAD V    + +       L      
Sbjct: 181 SAAIQIAKLFGATVIAT----AGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236

Query: 263 ALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 294
            +    VG  +  K LK L++GG +VT G  +
Sbjct: 237 DVVVEHVGAATWEKSLKSLARGGRLVTCGATT 268

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  111 bits (281), Expect = 4e-28
 Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 20/276 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+ Y   G PD V+++ +LP       +V V++ A+ +NP D     G YP  P +P V
Sbjct: 2   RAIRYHEFGAPD-VLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD----WVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            G +G G V +VG  V  L  GD      +      GT   YVV        +      E
Sbjct: 61  PGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
             A + +  LTA R L       +G++++ +G +  VG   +Q+AR  G   I      A
Sbjct: 121 QGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIAT----A 176

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKN-VKGLLANLPEPALGFNCV----GGNSASKVLK 279
            S E  E ++  GAD VF     ++ + +    A       G + +       + +K L 
Sbjct: 177 SSAEGAELVRQAGADAVFNYRAEDLADRILAATA-----GQGVDVIIEVLANVNLAKDLD 231

Query: 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF 315
            L+ GG +V YG    +  T+  +  + K+ S++G 
Sbjct: 232 VLAPGGRIVVYGSGGLRG-TIPINPLMAKEASIRGV 266

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  111 bits (281), Expect = 5e-28
 Identities = 73/254 (28%), Positives = 111/254 (43%), Gaps = 24/254 (9%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV   + G P+ V++  ++P  E    +V V+  A  +N  D     G+YP+    P V
Sbjct: 1   KAVRIHKTGGPE-VLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL--PFV 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167
            G EG G V +VG  VT    GD V    PP  G +  Y V   S   K+      E AA
Sbjct: 58  LGVEGAGVVEAVGPGVTGFKVGDRVAYAGPP--GAYAEYRVVPASRLVKLPDGISDETAA 115

Query: 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            +++  LTA  +L +   +  GD+++ + A   VG  + Q A+  G   I        S+
Sbjct: 116 ALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVI----GTVSSE 171

Query: 228 EAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280
           E  E  +  GAD V       F E   E+   +G+          ++ VG ++    L  
Sbjct: 172 EKAELARAAGADHVINYRDEDFVERVREITGGRGVDV-------VYDGVGKDTFEGSLDS 224

Query: 281 LSQGGTMVTYGGMS 294
           L   GT+V++G  S
Sbjct: 225 LRPRGTLVSFGNAS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  110 bits (277), Expect = 2e-27
 Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 11/300 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV +  G P+ +  + E+PP      +V +++ AA +N  D+  I+G Y V+P +P V
Sbjct: 2   KAVVCKELGGPEDL-VLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V +VG  VT    GD V+      G +   VV   +    +      E AA 
Sbjct: 61  PGSEVAGVVEAVGEGVTGFKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAA 119

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + V   TA   L     L  G++++  GA   VG   +Q+A+  G   I      A S+E
Sbjct: 120 LPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAA----ASSEE 175

Query: 229 AKEKLKGLGADEVFTESQLEVK-NVKGLLANLPEPA-LGFNCVGGNSASKVLKFLSQGGT 286
                + LGAD V      +++  VK L         + ++ VGG+     L+ L+ GG 
Sbjct: 176 KLALARALGADHVIDYRDPDLRERVKALTG--GRGVDVVYDPVGGDVFEASLRSLAWGGR 233

Query: 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
           ++  G  S +   +  +  + K++S+ G +   +   E      N+ + L  L  EGK++
Sbjct: 234 LLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAE-LFDLLAEGKIR 292

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  108 bits (273), Expect = 4e-27
 Identities = 90/318 (28%), Positives = 135/318 (42%), Gaps = 31/318 (9%)

Query: 51  VVYEREGPPDSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPVRPKV-PA 107
           VVY R G P+ ++ + +E+P    K  +V VK+ AA +NP D     G    +  +  P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKD-QSVWHKVSKDSPME 164
           + G +  GEV +VGS VTR   GD V     P   G    YVV     +  K    S  E
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSF-E 119

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + V  LTAL+ L D   +  G  ++ NGA+  VG   +QIA+  G H   +     
Sbjct: 120 EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGV----- 174

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS--KVLKFLS 282
            S    E ++ LGADEV   +  +      L A   +  + F+ VG +  S  +    L 
Sbjct: 175 CSTRNAELVRSLGADEVIDYTTEDFVA---LTAGGEKYDVIFDAVGNSPFSLYRASLALK 231

Query: 283 QGGTMVTYGGMSKKPITVSTSAFIF-KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 341
            GG  V+ GG     + V     +       +  +     ++E   +   +++       
Sbjct: 232 PGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVE------- 284

Query: 342 EGKLK------YDMELVP 353
           EGKLK      Y +E  P
Sbjct: 285 EGKLKPVIDSVYPLEDAP 302

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  103 bits (260), Expect = 4e-25
 Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 43/321 (13%)

Query: 48  SKAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           ++ VV  R G P+ + +   +LP       +V VK+ A+ ++ +D+    G+YP +P +P
Sbjct: 1   NREVVVTRRGGPEVLKVVEADLPEPAA--GEVVVKVEASGVSFADVQMRRGLYPDQPPLP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
              GY+ VG V ++GS VT    GD V       G    Y+  D      V +      A
Sbjct: 59  FTPGYDLVGRVDALGSGVTGFEVGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEA 117

Query: 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 226
             +++N +TA +ML     + +G  ++ +GA+  VGQ ++++A   G            S
Sbjct: 118 VCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYG-----TAS 172

Query: 227 DEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280
           +     L+ LGA       + +  + L    V  +          F+ VGG S  +    
Sbjct: 173 ERNHAALRELGATPIDYRTKDWLPAMLTPGGVDVV----------FDGVGGESYEESYAA 222

Query: 281 LSQGGTMVTYG-------GMSKKPITVSTSAFIFKDLSLKGFWLQK--------WLSSEK 325
           L+ GGT+V YG       G        S  A + K   LK     +           +E 
Sbjct: 223 LAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAK---LKLLPTGRRATFYYVWRDRAED 279

Query: 326 ATECRNMIDYLLCLAREGKLK 346
               R  +  LL L  +GK++
Sbjct: 280 PKLFRQDLTELLDLLAKGKIR 300

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 98.8 bits (247), Expect = 3e-23
 Identities = 72/261 (27%), Positives = 109/261 (41%), Gaps = 30/261 (11%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G    V+  + +P  +   ++V VK+ A  +NP D    +  Y   P  PA+
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVP--KPGPDEVLVKVKAVALNPVDWKHQD--YGFIPSYPAI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQSVWHKVSKDS 161
            G +  G V  VGS VTR   GD V        P+ P +G +Q YVV D  +  K+  + 
Sbjct: 58  LGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNI 117

Query: 162 PMEYAATIIVNPLTA-------LRMLEDFTTLNS---GDSIVQNGATSIVGQCIIQIARH 211
             E AAT+ V  +TA       L +       +    G  ++  G +S VG   IQ+A+ 
Sbjct: 118 SFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKL 177

Query: 212 RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG- 270
            G   I        S +  + +K LGAD VF     +V           +     +C+  
Sbjct: 178 AGYKVITT-----ASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCIST 231

Query: 271 GNSASKVLKFLSQ--GGTMVT 289
             SA    + L +  GG +V+
Sbjct: 232 PESAQLCAEALGRSGGGKLVS 252

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 96.4 bits (241), Expect = 2e-22
 Identities = 90/355 (25%), Positives = 146/355 (41%), Gaps = 69/355 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E  G     +K + +P  E    +V VK+ A+ +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEEFGEKPYEVKDVPVP--EPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD-----WVI-----------------PSPPSS-----G 141
           GG+EG G V +VG  V+ L  GD     W+                  P+  +S     G
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDG 119

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGAT 198
           T+  Y + D      +      E AA ++   +T   AL+       L  GD +V +GA 
Sbjct: 120 TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAG----LKPGDWVVISGAG 175

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV--FTESQLEVKNVKGL 255
             +G   +Q A+  G+  I I  D     + K +L K LGAD    F +S   V+ VK L
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAI--D---VGDEKLELAKELGADAFVDFKKSDD-VEAVKEL 229

Query: 256 LANLPEPALG----FNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 310
                    G           +A +  L +L  GGT+V  G      I +     + + +
Sbjct: 230 TGG-----GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGI 284

Query: 311 SLKGFWLQKWLSSEKAT--ECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSK 363
           ++ G        S   T  + +  ++     A  GK+K  +++VP  +      K
Sbjct: 285 TIVG--------SLVGTRQDLQEALE----FAARGKVKPHIQVVPLEDLNEVFEK 327

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 94.4 bits (236), Expect = 7e-22
 Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 28/277 (10%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V +  G P+ V+++ E+P       +V +++ AA +N +D+ + +G+YP  P    +
Sbjct: 2   KAIVIKEPGGPE-VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD----WVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            G E  G V +VG  VT    GD     +     + G +  YVV        V +   + 
Sbjct: 61  LGLEVAGVVVAVGPGVTGWKVGDRVCALL-----AGGGYAEYVVVPAGQLLPVPEGLSLV 115

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA +     TA + L     L +G++++ +G  S VG   IQ+A+  G   I      A
Sbjct: 116 EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIAT----A 171

Query: 225 GSDEAKEKLKGLGAD-------EVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
           GS+E  E  + LGAD       E F E   E    +G   ++       + VGG+  ++ 
Sbjct: 172 GSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRG--VDVI-----LDMVGGDYLARN 224

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           L+ L+  G +V  G +      +  +  + K L+L G
Sbjct: 225 LRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTG 261

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 92.3 bits (230), Expect = 5e-21
 Identities = 88/347 (25%), Positives = 142/347 (40%), Gaps = 64/347 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V ++ G P   +++ E+P  E    +V +K+ A  +  +D++  +G +PV PK+P +
Sbjct: 5   KAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV-PKLPLI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSS--------------------------G 141
            G+E VG V  VG  VT L  GD V +     S                          G
Sbjct: 61  PGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDG 120

Query: 142 TWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGA 197
            +  YV V  + V   + +   +  AA ++   +T   AL+       +  G  +   GA
Sbjct: 121 GYAEYVVVPARYVVK-IPEGLDLAEAAPLLCAGITTYRALKKAN----VKPGKWVAVVGA 175

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
              +G   +Q A+  G   I I R    S+E  E  K LGAD V   S  +       +A
Sbjct: 176 GG-LGHMAVQYAKAMGAEVIAITR----SEEKLELAKKLGADHVINSSDSDALEAVKEIA 230

Query: 258 NLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFW 316
           +     +  + VG  +    LK L +GGT+V  G     PI  +     I K++S+ G  
Sbjct: 231 DA---II--DTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL 285

Query: 317 -LQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTAL 361
              +        +    +D     A EGK+K + +E +P +    A 
Sbjct: 286 VGTRA-------DLEEALD----FAAEGKIKPEILETIPLDEINEAY 321

Length = 339

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.3 bits (225), Expect = 3e-20
 Identities = 74/309 (23%), Positives = 125/309 (40%), Gaps = 28/309 (9%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E  G P+ V ++ E+P  +     V V++ A+ +NP D     G    RP +PA+
Sbjct: 2   KALVLESFGGPE-VFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPME 164
            G +  G V +VG  VTR   GD V           G+   Y V D  +      +  M 
Sbjct: 61  LGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMR 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + +  +TA   L D   + +G +++ +G    VG   +Q+A+  G           
Sbjct: 121 EAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYA-----T 175

Query: 225 GSDEAKEKLKGLGADEV------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
            S E     + LGAD +        E   E    +G         + F+ VGG +     
Sbjct: 176 ASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGF-------DVVFDTVGGETLDASF 228

Query: 279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG-FWLQKWLSSEKATECRNMIDYLL 337
           + ++  G +V+  G +   +   +    F++ +  G F L   L+ E       ++    
Sbjct: 229 EAVALYGRVVSILGGATHDLAPLS----FRNATYSGVFTLLPLLTGEGRAHHGEILREAA 284

Query: 338 CLAREGKLK 346
            L   G+L+
Sbjct: 285 RLVERGQLR 293

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.0 bits (224), Expect = 3e-20
 Identities = 91/342 (26%), Positives = 136/342 (39%), Gaps = 30/342 (8%)

Query: 49  KAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V  + G    + ++ IE+P       +V VK+ AA +NP D   I    P     P 
Sbjct: 2   KAWVLPKPGAALQLTLEEIEIPGP--GAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPH 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY 165
           V G +G G V +VG+ VT    GD V    S    G++  Y V D      +      E 
Sbjct: 59  VPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEE 118

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
           AA +    LTA + L     + +G +I+  G    VG   +Q+A+  G+  I        
Sbjct: 119 AAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVIT-----TC 173

Query: 226 SDEAKEKLKGLGADEVF-------TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
           S    E +K LGAD V         E   E+   +G+ A         + VGG +A+ + 
Sbjct: 174 SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAV-------LDTVGGETAAALA 226

Query: 279 KFLSQGGTMVT-YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 337
             L+  G +V   G     P    T A    +++L               + R   + LL
Sbjct: 227 PTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHG--DPAAWQDLRYAGEELL 284

Query: 338 CLAREGKL-KYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378
            L   GKL    +E++PF     AL  AL    ++ K V+  
Sbjct: 285 ELLAAGKLEPLVIEVLPFEQLPEALR-ALKDRHTRGKIVVTI 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 88.2 bits (219), Expect = 2e-19
 Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 21/254 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AV  +  G  D V+K+ E P    K NDV +K+ AA +N +D  + +G YP  P    +
Sbjct: 3   RAVTLKGFGGVD-VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V  VGS V R   GD V+   P  G  +  V     V H + +    E AA 
Sbjct: 62  LGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMH-IPQGYTFEEAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           I    LTA ++L+    +  G S++ +   S VG    Q+A   G  +I        S+E
Sbjct: 121 IPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATII----TTSSEE 176

Query: 229 AKEKLKGLGA--------DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280
             +  K L A        +E F     ++   KG+        L  +CVGG+  S+  + 
Sbjct: 177 KVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGV-------NLVLDCVGGSYLSETAEV 229

Query: 281 LSQGGTMVTYGGMS 294
           L+  G  + YG M 
Sbjct: 230 LAVDGKWIVYGFMG 243

Length = 334

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 47/294 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V+E+ G  +  +K+ ++   +    +V +++  A +NP D N I     V+P  P +
Sbjct: 2   KALVFEKSGIEN--LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVIN-AVKVKPM-PHI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--------------------------IPSPPSSGT 142
            G E  G V  VG  V  +  GD V                          I    S+G 
Sbjct: 58  PGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  Y+V  +    K+      E AA++ V  LTA   L+    L  G+++V  GA+   G
Sbjct: 118 YAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTG 176

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT--ESQLEVKNVKGLLANLP 260
              +Q+A+  G   I + R        K+ LK  GADEV    E + +VK +   +A++ 
Sbjct: 177 IFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEVEEKVKEITK-MADVV 227

Query: 261 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
                 N +G +     L  L +GG +VT+G ++   + +  S    K +S+ G
Sbjct: 228 -----INSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIG 276

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 86.9 bits (216), Expect = 5e-19
 Identities = 84/328 (25%), Positives = 125/328 (38%), Gaps = 40/328 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEG---------- 97
           KA      G  DS++ +     PV  K N V +K+ AA +NP D+    G          
Sbjct: 2   KAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKR 61

Query: 98  ----VYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVVKDQ 151
                     + P   G +  G V  +GS V     GD  W    P S GT   YVV  +
Sbjct: 62  KPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPE 121

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN----SGDSIVQNGATSIVGQCIIQ 207
           +   K  K+   E AA++    LTA   L +   LN    +G  ++  G +  VG   IQ
Sbjct: 122 NEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQ 181

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLLANLPEPALG 265
           + +  G H          S +A   +K LGAD+V  +     E +     L    +  + 
Sbjct: 182 LLKAWGAHVTTTC-----STDAIPLVKSLGADDVIDYNNEDFEEE-----LTERGKFDVI 231

Query: 266 FNCVGGNSASKVLKFLSQGGTMVTYGG-----MSKKPITVS--TSAFIFKDLSLKGFWLQ 318
            + VGG++    LK L +GGT VT          K  +      SA      ++K     
Sbjct: 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKG 291

Query: 319 KWLSSEKATECRNMIDYLLCLAREGKLK 346
                   +   + +D L  L  +GK+K
Sbjct: 292 SHYRWGFFSPSGSALDELAKLVEDGKIK 319

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 19/250 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G  D  +K+ +    E    +V V++ A  +N +D+   +G+Y   PK P V
Sbjct: 1   RAVVLTGFGGLD-KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFV 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G+E  G V +VG  V     GD V+      G +   V         +      E AA 
Sbjct: 60  PGFECAGTVEAVGEGVKDFKVGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAA 118

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             VN LTA   L +   L  G S++ + A   VG    Q+ +   + ++ ++     +  
Sbjct: 119 FPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKT--VPNVTVV---GTASA 173

Query: 229 AK-EKLKGLGADEVFTESQL----EVKNVKGLLANLPEP-ALGFNCVGGNSASKVLKFLS 282
           +K E LK  G   V          EVK +       PE   +  + +GG    K    L 
Sbjct: 174 SKHEALKENGVTHVIDYRTQDYVEEVKKI------SPEGVDIVLDALGGEDTRKSYDLLK 227

Query: 283 QGGTMVTYGG 292
             G +V YG 
Sbjct: 228 PMGRLVVYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 81.2 bits (201), Expect = 4e-17
 Identities = 89/349 (25%), Positives = 138/349 (39%), Gaps = 65/349 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA +  +   P  +    E+P  E    +V +K+ AA +   D+   +G +P R K P +
Sbjct: 2   KAAILHKPNKPLQIE---EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP-RGKYPLI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E VG V  VG  V R  PGD VI                                G 
Sbjct: 58  LGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  YV   +    K+  +   E AA +    +     AL+       +  GD+++  GA 
Sbjct: 118 FAEYVKVPERSLVKLPDNVSDESAA-LAACVVGTAVHALKR----AGVKKGDTVLVTGAG 172

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLL 256
             VG   IQ+A+  G   I + R    S E  + LK LGAD V   S+   +VK + G  
Sbjct: 173 GGVGIHAIQLAKALGARVIAVTR----SPEKLKILKELGADYVIDGSKFSEDVKKLGGAD 228

Query: 257 ANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFW 316
                       VG  +  + L+ L++GG +V  G ++  P  +     I K++ + G  
Sbjct: 229 V-------VIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIG-- 279

Query: 317 LQKWLSSEKATECRNMIDYLLCLAREGKLK--YDMELVPFNNFQTALSK 363
                 S  AT  +  ++  L L +EGK+K   D   V   +   AL  
Sbjct: 280 ------SISAT--KADVEEALKLVKEGKIKPVIDRV-VSLEDINEALED 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 81.2 bits (201), Expect = 5e-17
 Identities = 104/370 (28%), Positives = 159/370 (42%), Gaps = 59/370 (15%)

Query: 49  KAVVY-EREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           KA+ +     P    I  I+LP P   K+N++ VK+ AA +NP D+ ++   Y    KV 
Sbjct: 2   KALTFKNNTSPLT--ITTIKLPLPNCYKDNEIVVKVHAAALNPVDL-KLYNSYTFHFKVK 58

Query: 107 AVG-GYEGVGEVYSVGSAV-TRLAPGDWV--IPSPPSS--GTWQSYVVKD-----QSVWH 155
             G G +  G +  VGS V +    GD V  I   P    GT   Y++ D     +S+  
Sbjct: 59  EKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 156 KVSKDSPMEYAATIIVNPL---TALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIA-R 210
           K    S  E AA     PL   TA ++LED    L     ++  G ++ VG+  IQ+A  
Sbjct: 119 KPENISLEEAAAW----PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKN 174

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPA---LGF 266
           H  I ++        S  + E  K LGAD          VK +K +L N+       L  
Sbjct: 175 HYNIGTVVGT----CSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLIL 230

Query: 267 NCVGGN----SASKVLKFLSQGGTMVTYGGMSK----KPITVSTSAF------IFKDLSL 312
           +CVGG       + +LK  S+ G  VT  G  K    K    S          +F  L L
Sbjct: 231 DCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL 290

Query: 313 KGFWLQKWL---SSEKATECRNMIDYLLCLAREGKLKYDMELV-PFNNFQTALSKALGLH 368
             +  Q +L   +++   +C  +I        +GK+K  ++ V PF +++ A  + L  +
Sbjct: 291 WSYNYQFFLLDPNADWIEKCAELI-------ADGKVKPPIDSVYPFEDYKEAFER-LKSN 342

Query: 369 GSQPKQVIKF 378
            ++ K VIK 
Sbjct: 343 RAKGKVVIKV 352

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 79.9 bits (198), Expect = 1e-16
 Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 23/207 (11%)

Query: 49  KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KA+ + +  P   PDS+I  IELP       D+ V++ A  +NP D     G  PV P  
Sbjct: 2   KAIGFTQPLPITDPDSLID-IELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQ 59

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQ-SVWHKVSKDSP 162
           P + G++  G V +VGS VT    GD V         G+   Y + D+  V HK    S 
Sbjct: 60  PKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSF 119

Query: 163 MEYAATIIVNPLTAL--------RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214
            E AA     PLT+L        R+       N G +++  G    VG   IQ+A+   +
Sbjct: 120 AEAAAL----PLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQ--L 173

Query: 215 HSINIIRDRAGSDEAKEKLKGLGADEV 241
             + +I   A   E+   +K LGAD V
Sbjct: 174 TGLTVIAT-ASRPESIAWVKELGADHV 199

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 77/347 (22%), Positives = 119/347 (34%), Gaps = 60/347 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA  + +      V+   E+P  E    +V VK+ AA +  SD++ ++G  P   K+P  
Sbjct: 2   KAWRFHKGSKGLLVL--EEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLT 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGT 142
            G+E  G V  VG+ VT    GD V                                 G 
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATI---IVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
           +  Y+V        V    P   AA     ++ P  A+               V      
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR----AGEVKPGETVLVIGLG 175

Query: 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259
            +G   +QIA+  G   I +       + AKE    LGADEV         +        
Sbjct: 176 GLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE----LGADEVLN-----SLDDSPKDKKA 226

Query: 260 PEPALGFN----CVG-GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
                GF+     VG   +     K +  GG +V  G + +  +TV  S  I ++L + G
Sbjct: 227 AGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVG-LGRDKLTVDLSDLIARELRIIG 285

Query: 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTAL 361
            +     + E   E  ++I        +GKL   +E  P +     L
Sbjct: 286 SF---GGTPEDLPEVLDLI-------AKGKLDPQVETRPLDEIPEVL 322

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 75.9 bits (188), Expect = 1e-15
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 14/163 (8%)

Query: 80  VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS 139
           +++ AA +N  D+    G+YP      AV G E  G V  VG  VT LA GD V+    +
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--A 54

Query: 140 SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
            G + + VV D  +   +      E AAT+ V  LTA   L D   L  G+S++ + A  
Sbjct: 55  PGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAG 114

Query: 200 IVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADE 240
            VGQ  IQ+ARH G  + +       AGS E ++ L+ LG  +
Sbjct: 115 GVGQAAIQLARHLGAEVFAT------AGSPEKRDFLRALGIPD 151

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 86/296 (29%), Positives = 123/296 (41%), Gaps = 31/296 (10%)

Query: 75  ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
             +V VK     IN SDIN   G Y    K P   G+EGVGEV +VG  VT    GD V 
Sbjct: 30  PGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAV- 88

Query: 135 PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 194
            +  S G +  Y V        V +  P E    ++V+ LTA   LE+   + SG++++ 
Sbjct: 89  -ATMSFGAFAEYQVVPARHAVPVPELKP-EV-LPLLVSGLTASIALEEVGEMKSGETVLV 145

Query: 195 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQLEVKN 251
             A    GQ  +Q+A+  G H I        SDE  E LK LG D      TE   EV  
Sbjct: 146 TAAAGGTGQFAVQLAKLAGCHVIGT----CSSDEKAEFLKSLGCDRPINYKTEDLGEV-- 199

Query: 252 VKGLLANLPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMS--KKPITVSTSA---- 304
              L    P+   + +  VGG      +  L+  G ++  G +S  +     S       
Sbjct: 200 ---LKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL 256

Query: 305 ---FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNF 357
               + K  S++GF+L  +            +D LL L + GKL  +++   F   
Sbjct: 257 PPKLLAKSASVRGFFLPHYAKLIPQH-----LDRLLQLYQRGKLVCEVDPTRFRGL 307

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 83/346 (23%), Positives = 129/346 (37%), Gaps = 62/346 (17%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AVV+   GP     +  E+P  E    +V +K+ A  +  +D++  EG +    K P V 
Sbjct: 3   AVVHAAGGPL----EPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVP 57

Query: 110 GYEGVGEVYSVGSAVTRLAPGD-----WVIPS-----------PP-----------SSGT 142
           G+E VGEV  VG+ V     GD     W++ S                        + G 
Sbjct: 58  GHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  Y+V D      +    P+  AA ++   +T    L D      G+ +   G   + G
Sbjct: 118 YAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA-GPRPGERVAVLGIGGL-G 175

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKG---LLA 257
              +Q AR  G  ++ I R    S + +E  + LGADEV        E     G   +L 
Sbjct: 176 HLAVQYARAMGFETVAITR----SPDKRELARKLGADEVVDSGAELDEQAAAGGADVILV 231

Query: 258 NLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
            +   A          A   L  L +GG +V  G     P +      I K  S+ G   
Sbjct: 232 TVVSGAA---------AEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAG--- 279

Query: 318 QKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSK 363
                  +A + +  +D     A EGK+K  +E  P +    A  +
Sbjct: 280 --STHGGRA-DLQEALD----FAAEGKVKPMIETFPLDQANEAYER 318

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 75.2 bits (185), Expect = 3e-15
 Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 12/173 (6%)

Query: 74  KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
              +V +++ A  +N  D+  + G+YP  P  P   G+E  G V +VG  VTRLA GD V
Sbjct: 6   GPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEV 65

Query: 134 IPS-PPSSGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT--LNSG 189
           I     S G   + V   +  V  K +  S  E  A     P+  L +++ F    L  G
Sbjct: 66  IAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACAL----PVVFLTVIDAFARAGLAKG 121

Query: 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
           + I+   AT   G   +Q+AR +G      I   A SD+  E LK LG   V 
Sbjct: 122 EHILIQTATGGTGLMAVQLARLKGA----EIYATASSDDKLEYLKQLGVPHVI 170

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 74.9 bits (185), Expect = 6e-15
 Identities = 97/364 (26%), Positives = 133/364 (36%), Gaps = 92/364 (25%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV++E   P    I+ +EL        +V V++ AA +  SD++ + G  P    +PAV 
Sbjct: 4   AVLHEVGKPL--EIEEVELDDP--GPGEVLVRIAAAGLCHSDLHVVTGDLPAP--LPAVL 57

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGT--W----QSY---------------- 146
           G+EG G V  VG  VT + PGD V+ S  P+ GT  +    Q                  
Sbjct: 58  GHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDG 117

Query: 147 ------------------------VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED 182
                                   VV + SV  K+  D P++ AA +     T +     
Sbjct: 118 TRRFTADGEPVGAMCGLGTFAEYTVVPEASVV-KIDDDIPLDRAALLGCGVTTGVG---- 172

Query: 183 FTTLNSGDSIVQNGATSIV------GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 236
              +N+    V+ G T  V      G   IQ AR  G   I I  D     E  E  +  
Sbjct: 173 -AVVNTAR--VRPGDTVAVIGCGGVGLNAIQGARIAGASRI-IAVDP--VPEKLELARRF 226

Query: 237 GADEVFTESQLE-VKNVKGLLANLPEPALG----FNCVG-GNSASKVLKFLSQGGTMVTY 290
           GA      S+ + V+ V+ L         G    F  VG   +  + L    +GGT V  
Sbjct: 227 GATHTVNASEDDAVEAVRDLTD-----GRGADYAFEAVGRAATIRQALAMTRKGGTAVVV 281

Query: 291 GGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY--LLCLAREGKLKYD 348
           G       TVS  A          F  +K L            D   LL L R G+LK D
Sbjct: 282 GMGPPGE-TVSLPALEL-------FLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLD 333

Query: 349 MELV 352
            ELV
Sbjct: 334 -ELV 336

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 74.1 bits (183), Expect = 9e-15
 Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 58/302 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+VYE  G     +++ E+P  E   ++V +K+ A  I  +D++  EG +      P V
Sbjct: 2   KALVYEGPG----ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG--AAPPLV 55

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPP------------------------SSGT 142
            G+E  G V +VGS VT    GD V   P+                           +G 
Sbjct: 56  PGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGG 115

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT-ALRMLEDFTTLNSGDSIVQNGATSIV 201
           +  YVV      +K+  +   E AA     PL+ A+  L D   +  GDS++  GA  I 
Sbjct: 116 FAEYVVVPAKQVYKIPDNLSFEEAALA--EPLSCAVHGL-DLLGIKPGDSVLVFGAGPI- 171

Query: 202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLP 260
           G  + Q+ +  G   + +    A  +E K +L K LGA E    S+ + +  K       
Sbjct: 172 GLLLAQLLKLNGASRVTV----AEPNEEKLELAKKLGATETVDPSREDPEAQKED----- 222

Query: 261 EPALGFN----CVGGNSASKV---LKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSL 312
               GF+      G      +   +++  +GGT++ +G  +    +++S      K+L++
Sbjct: 223 -NPYGFDVVIEATG--VPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTI 279

Query: 313 KG 314
            G
Sbjct: 280 IG 281

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 74.1 bits (183), Expect = 9e-15
 Identities = 87/320 (27%), Positives = 129/320 (40%), Gaps = 39/320 (12%)

Query: 48  SKAVVYER--EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           ++ VV  +  EGPP     +++E+P  E+K+ +V V+ L   ++P     +       P 
Sbjct: 2   NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPP 61

Query: 105 VP---AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY-VVKDQSVWHKV--S 158
           V     + G  GVGEV  V S       GD V         WQ Y VV   S   K+  S
Sbjct: 62  VQLGEPMRGG-GVGEV--VESRSPDFKVGDLVSGFLG----WQEYAVVDGASGLRKLDPS 114

Query: 159 KDSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
              P+     ++    LTA   L +      G+++V + A   VG  + QIA+  G   +
Sbjct: 115 LGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVV 174

Query: 218 NIIRDRAGSDEAKEKLKG-LGADEVFT--ESQLEVKNVKGLLANLPEPA-LGFNCVGGNS 273
            I    AGSDE    L   LG D         L     + L    P+   + F+ VGG  
Sbjct: 175 GI----AGSDEKCRWLVEELGFDAAINYKTPDLA----EALKEAAPDGIDVYFDNVGGEI 226

Query: 274 ASKVLKFLSQGGTMVTYGGMS----KKPITVSTSAFI-FKDLSLKGFWLQKWLSSEKATE 328
               L  L++GG +   G +S     +P        I  K L+++GF     + S+ A  
Sbjct: 227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGF-----IVSDYADR 281

Query: 329 CRNMIDYLLCLAREGKLKYD 348
               +  L     EGKLKY 
Sbjct: 282 FPEALAELAKWLAEGKLKYR 301

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)

Query: 48  SKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
            KA+V  + GP P +V ++ E+P  E    +V +K+ AA I  SD++  +G Y    + P
Sbjct: 1   MKALV--KTGPGPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD-PVETP 56

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI----------------------PSPPSSGTWQ 144
            V G+E  G +  VG  V     GD V+                      P     GT  
Sbjct: 57  VVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQA 116

Query: 145 S-----YVVKDQSVWHKVSKDSPMEYAATIIVNPLT-ALRMLEDFTTLNSGDSIVQNGAT 198
                 YV+  +   H++ ++  +E AA  +  PL  A+  + + + +  GD++V  G  
Sbjct: 117 DGGFAEYVLVPEESLHELPENLSLEAAA--LTEPLAVAVHAVAERSGIRPGDTVVVFG-P 173

Query: 199 SIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL 256
             +G    Q+A+ +G  +  +   +D    D AKE    LGAD V    +   + V   +
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE----LGADAVNGGEEDLAELVNE-I 228

Query: 257 ANLPEPALGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF 315
            +     +   C G   A +  L+ L +GG +V  G       ++     I K+LS+ G 
Sbjct: 229 TDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGS 288

Query: 316 WLQKWLSSEKA 326
                 S E A
Sbjct: 289 RSSTPASWETA 299

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 80/297 (26%), Positives = 118/297 (39%), Gaps = 47/297 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA      G  D+ +K++E P  E    +V V++ A  +N  D+  + G YP   K P +
Sbjct: 2   KAWRLSGGGGLDN-LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS--------------------PPSSGTWQSYVV 148
              +G GEV +VG  VTR   GD V+P+                     P  G    YVV
Sbjct: 61  PLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVV 120

Query: 149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI-VQ-NGATSIVGQCII 206
             +    +       E AAT+    LTA   L     L  GD++ VQ  G  S+     +
Sbjct: 121 LPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFA---L 177

Query: 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-----LEVKNVKGLLANLPE 261
           Q A+  G   I      + SDE  E+ K LGAD V           EV  + G       
Sbjct: 178 QFAKAAGARVIAT----SSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTG------- 226

Query: 262 PALGFNCV----GGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
              G + V    G  + ++ +K ++ GG +   G +S     V     + K  +L+G
Sbjct: 227 -GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRG 282

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 20/273 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+     G P+ V+ ++E+P    K  +V +++ AA +N  D+ +  G YP  P    +
Sbjct: 2   KAIEITEPGGPE-VLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  GEV +VG  V+R   GD V       G  + YV         V +   +  AA 
Sbjct: 61  LGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAE-YVAVPAGQVLPVPEGLSLVEAAA 119

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +     T    L     L +G++++ +G  S +G   IQ+A+  G          AGSDE
Sbjct: 120 LPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTT----AGSDE 175

Query: 229 AKEKLKGLGADEVF---TESQLEVKNVKGLLANLPEPALGFNC----VGGNSASKVLKFL 281
                + LGAD       E  +EV  VK           G +     VGG+  ++ +K L
Sbjct: 176 KCAACEALGADIAINYREEDFVEV--VKAETGG-----KGVDVILDIVGGSYLNRNIKAL 228

Query: 282 SQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           +  G +V  G    +   +     + K L++ G
Sbjct: 229 ALDGRIVQIGFQGGRKAELDLGPLLAKRLTITG 261

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 91/366 (24%), Positives = 148/366 (40%), Gaps = 72/366 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E+ G     ++++++P       +V V++    I  SD++   G  P     P +
Sbjct: 2   KALVCEKPG----RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------GT 142
            G+E  GEV  VG  V  L  GD V+  P  S                          G 
Sbjct: 57  LGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGG 116

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  Y+V        V +   ++ AA  +V PL     A+R       + +GD+++  GA 
Sbjct: 117 FAEYIVVPAD-ALLVPEGLSLDQAA--LVEPLAIGAHAVRR----AGVTAGDTVLVVGAG 169

Query: 199 SIVGQCIIQIARHRGIHSI--NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL 256
            I G  +IQ+A+ RG   I  +I  +R   + A+E    LGAD+       +V      L
Sbjct: 170 PI-GLGVIQVAKARGARVIVVDIDDERL--EFARE----LGADDTINVGDEDVAARLREL 222

Query: 257 ANLPEPALGFNCVGGNSAS--KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
            +     +  +   GN AS  + ++ ++ GG +V   G+SK P+T     F  K+L++  
Sbjct: 223 TDGEGADVVIDAT-GNPASMEEAVELVAHGGRVV-LVGLSKGPVTFPDPEFHKKELTI-- 278

Query: 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM---ELVPFNNFQTALSKALGLHGSQ 371
                 L S  AT  R     ++ L   GK+  +       PF +   A         + 
Sbjct: 279 ------LGSRNAT--REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWE----AP 326

Query: 372 PKQVIK 377
           P  VIK
Sbjct: 327 PGGVIK 332

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 80/343 (23%), Positives = 123/343 (35%), Gaps = 48/343 (13%)

Query: 57  GPPDSVIKMIELPPVEVKENDVCVKMLAAPINP------SDINRIEGVYPVRPKVPAVGG 110
            P D  ++ +++P  E  E  V ++ L   ++P      SD        PV      VGG
Sbjct: 23  VPDDFRLEEVDVP--EPGEGQVLLRTLYLSLDPYMRGRMSDAPSY--APPVELGEVMVGG 78

Query: 111 YEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKV-SKDSPMEYAATI 169
              V +V  V S      PGD V+        WQ Y + D     K+    +P+     +
Sbjct: 79  --TVAKV--VASNHPGFQPGDIVV----GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGV 130

Query: 170 IVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +  P LTA   L D     +G+++V + A   VG  + QIA+ +G   + I    AG  E
Sbjct: 131 LGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGI----AGGAE 186

Query: 229 AKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPA-----LGFNCVGGNSASKVLKFLS 282
             + L   LG D        +          L E       + F  VGG     VL  L+
Sbjct: 187 KCDFLTEELGFDAGIDYKAEDFA------QALKEACPKGIDVYFENVGGEVLDAVLPLLN 240

Query: 283 QGGTMVT------YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
               +        Y      P        + K L ++GF     ++S+        +  L
Sbjct: 241 LFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGF----IVASDYDQRFPEALREL 296

Query: 337 LCLAREGKLKYDMELVP-FNNFQTALSKALGLHGSQPKQVIKF 378
               +EGK++Y   +V    N   A    L       K V+K 
Sbjct: 297 GGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFG-KLVVKV 338

Length = 340

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 56/305 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    GP D  ++ + +P  E    +V VK+ A  I  +D+ +I G +    K P +
Sbjct: 2   KAAVLH--GPNDVRLEEVPVP--EPGPGEVLVKVRACGICGTDVKKIRGGH-TDLKPPRI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  GE+  VG  VT    GD V  +P                             G 
Sbjct: 57  LGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116

Query: 143 WQSYV-VKDQSVWH----KVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQNG 196
           +  YV V   +V      K+  +   E AA  +V PL   +        +  GD+++  G
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAA--LVEPLACCINAQRKA-GIKPGDTVLVIG 173

Query: 197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV---- 252
           A  I G     +A+  G   + I+ D   ++   E  K LGAD     ++ ++       
Sbjct: 174 AGPI-GLLHAMLAKASGARKV-IVSDL--NEFRLEFAKKLGADYTIDAAEEDLVEKVREL 229

Query: 253 -KGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKD 309
             G  A+     +     G   A ++ L+ + +GG ++ +GG+ K   + +  +   +++
Sbjct: 230 TDGRGAD-----VVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYRE 284

Query: 310 LSLKG 314
           +++ G
Sbjct: 285 ITITG 289

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 71.4 bits (176), Expect = 5e-14
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 76  NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           ++V V++ AA +N  D+    G+ P         G E  G V  VGS VT L  GD V+ 
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDE---TPLGLECSGIVTRVGSGVTGLKVGDRVMG 57

Query: 136 SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI-VQ 194
              + G + ++V  D  +  K+      E AAT+ V  LTA   L D   L  G+S+ + 
Sbjct: 58  L--APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIH 115

Query: 195 NGATSIVGQCIIQIARHRG 213
             A   VGQ  IQ+A+H G
Sbjct: 116 AAAGG-VGQAAIQLAQHLG 133

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 70.9 bits (174), Expect = 1e-13
 Identities = 86/368 (23%), Positives = 130/368 (35%), Gaps = 62/368 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            AVVY         +++ E PP      DV +++ A  I  SD++   G  P  P    +
Sbjct: 3   AAVVY---VGGG-DVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDII 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS---------------------------- 140
            G+E VGEV  VG  V     GD V+  P                               
Sbjct: 59  LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGG 117

Query: 141 ---GTWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQN 195
              G +  YV V       K+      E AA  +  PL TA     +   +  G ++V  
Sbjct: 118 GIDGGFAEYVRVPADFNLAKLPDGIDEEAAA--LTEPLATAYHGHAERAAVRPGGTVVVV 175

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           GA  I G   I +A+  G   + I+ DR  S E  E  K  G  +V      +    + L
Sbjct: 176 GAGPI-GLLAIALAKLLGASVV-IVVDR--SPERLELAKEAGGADVVVNPSEDDAGAEIL 231

Query: 256 LANLPEPA-LGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLK 313
                  A +    VG   A    L+ L  GGT+V  G    + I +     + K+L+L+
Sbjct: 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLR 291

Query: 314 GFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM---ELVPFNNFQTALSKALGLHGS 370
           G               R   +  L L   GK+  +      +P ++      +A  L   
Sbjct: 292 GSL---------RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAA----EAYELFAD 338

Query: 371 QPKQVIKF 378
           + ++ IK 
Sbjct: 339 RKEEAIKV 346

Length = 350

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 69.2 bits (170), Expect = 4e-13
 Identities = 85/326 (26%), Positives = 138/326 (42%), Gaps = 56/326 (17%)

Query: 48  SKAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           +K  V ++     P +S  +++E     +K+ +V  + L   ++P    R    Y  R  
Sbjct: 3   AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDP--YMR---PYSKRLN 57

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVV---KDQSVWHKV---- 157
                    V +V  + S  ++   G  V+ S    G W+++ V   KDQ   +K+    
Sbjct: 58  EGDTMIGTQVAKV--IESKNSKFPVGTIVVAS---FG-WRTHTVSDGKDQPDLYKLPADL 111

Query: 158 SKDSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
             D P   A  ++  P LTA   L +     +G+++V NGA   VG  + QIA+ +G   
Sbjct: 112 PDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKV 171

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL-PEPALGFNC----VGG 271
           I      AGSD+    LK LG D VF     +  +++  L    P+   G +C    VGG
Sbjct: 172 IGC----AGSDDKVAWLKELGFDAVF---NYKTVSLEEALKEAAPD---GIDCYFDNVGG 221

Query: 272 NSASKVLKFLSQGGTMV------TYGGMSKKPITVSTSAFIFKDLSLKGF----WLQKWL 321
             +S VL  ++  G +       TY     K         IFK L ++GF    W  +W 
Sbjct: 222 EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRW- 280

Query: 322 SSEKATECRNMIDYLLCLAREGKLKY 347
              +A +   ++ ++     EGKLKY
Sbjct: 281 --PEALK--QLLKWIK----EGKLKY 298

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 68.5 bits (168), Expect = 7e-13
 Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 17/260 (6%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD--INRIEGVYPVRPKVPA 107
           A+     GPP+ V+   ++P        V + + AA ++  D  +    G  P  P++P 
Sbjct: 3   AIRLHEFGPPE-VLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPY 61

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDW-----VIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
           V G E  G V +VG  V       W     V  +  + G +    V D    H V     
Sbjct: 62  VPGGEVAGVVDAVGPGV----DPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLD 117

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +E A  ++ +  TAL +L D  TL  GD ++   A   +G  ++Q+A+  G   +     
Sbjct: 118 LEAAVAVVHDGRTALGLL-DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGA--- 173

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
            AG       ++ LGAD     ++ +  +            +  + VGG      L  L+
Sbjct: 174 -AGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLA 232

Query: 283 QGGTMVTYGGMSKKPITVST 302
            GG  +TYG  S +   +  
Sbjct: 233 PGGRFLTYGWASGEWTALDE 252

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL 259
           VG   +Q+A+  G   + I  DR  S+E  E  K LGAD V      + V+ V+ L    
Sbjct: 2   VGLAAVQLAKALGAARV-IAVDR--SEEKLELAKELGADHVINYRDEDFVERVRELT--- 55

Query: 260 PEPALG----FNCVGGNSASKV-LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
                G     +CVG  +  +  L+ L  GG +V  G     P+       + K+L++ G
Sbjct: 56  --GGRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILG 113

Query: 315 FWL 317
              
Sbjct: 114 SLG 116

Length = 131

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 75  ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
             +V V++ AA I  SD++   G  P   K+P + G+EG G V  VG  VT L  GD V+
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPP-PVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVV 59

Query: 135 PSPPSS 140
             P   
Sbjct: 60  VYPLIP 65

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 84/303 (27%), Positives = 119/303 (39%), Gaps = 54/303 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V    GP D   + I  P  E    +V VK+ A  I  SDI R  G     P  P V
Sbjct: 2   KALVLT--GPGDLRYEDIPKP--EPGPGEVLVKVKACGICGSDIPRYLGTGAYHP--PLV 55

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--IPSPP------------------------SSGT 142
            G+E  G V  VGS V  LA GD V   P  P                          G 
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGA 115

Query: 143 WQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGA 197
           +  YV V  +++  K+      E AA I   P      A+R+      +  GD++V  GA
Sbjct: 116 FAEYVSVPARNL-IKIPDHVDYEEAAMI--EPAAVALHAVRLAG----ITLGDTVVVIGA 168

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
            +I G   IQ  +  G   +  + D    DE     + LGAD+     + +V+ V+ L  
Sbjct: 169 GTI-GLLAIQWLKILGAKRVIAV-DI--DDEKLAVARELGADDTINPKEEDVEKVRELTE 224

Query: 258 NLPEPALGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAF---IFKDLSLK 313
                 L     G  +  +  L     GG  V   G+    +T+S  AF   + K+L+++
Sbjct: 225 GR-GADLVIEAAGSPATIEQALALARPGGK-VVLVGIPYGDVTLSEEAFEKILRKELTIQ 282

Query: 314 GFW 316
           G W
Sbjct: 283 GSW 285

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 65.2 bits (159), Expect = 9e-12
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 7/89 (7%)

Query: 49  KAVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V   +G P S I+ IE+ PP   K  +V +K++A  +  +D++ I+G  P    +P 
Sbjct: 2   KAAVLWEKGKPLS-IEEIEVAPP---KAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPV 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           + G+EG G V S+G  VT L PGD VIP 
Sbjct: 56  ILGHEGAGIVESIGPGVTTLKPGDKVIPL 84

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 41/88 (46%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 49  KAVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V    G P  VI+ IE+ PP   K N+V +KMLA  +  +DI  IEG        P 
Sbjct: 4   KAAVAWEAGKP-LVIEEIEVAPP---KANEVRIKMLATSVCHTDILAIEGFKA--TLFPV 57

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           + G+EG G V SVG  VT L PGD VIP
Sbjct: 58  ILGHEGAGIVESVGEGVTNLKPGDKVIP 85

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 64.8 bits (159), Expect = 1e-11
 Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 58/294 (19%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDIN-----RIEGVYPVRPKVPAVGGYEGVGEV 117
           +++ E P  E    +V V++ A  I  SD++     RI G + V+   P V G+E  G V
Sbjct: 10  LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI-GDFVVKE--PMVLGHESAGTV 66

Query: 118 YSVGSAVTRLAPGDWV-----IP----------------------SPPSSGTWQSYVVKD 150
            +VGS VT L  GD V     +P                      +PP  GT   YV   
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHP 126

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206
               HK+  +  +E  A  +V PL+    A R       +  GD+++  GA  I G    
Sbjct: 127 ADFCHKLPDNVSLEEGA--LVEPLSVGVHACRRAG----VRPGDTVLVFGAGPI-GLLTA 179

Query: 207 QIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVF----TESQLEVKNVKGLLANLPE 261
            +A+  G   + ++ D    D ++ E  K LGA         ++    + +  LL     
Sbjct: 180 AVAKAFGATKV-VVTDI---DPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLG-GKG 234

Query: 262 PALGFNCVGGNSASKVLKF-LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           P +   C G  S  +   +    GGT+V   GM K  +T+  SA   +++ ++G
Sbjct: 235 PDVVIECTGAESCIQTAIYATRPGGTVVL-VGMGKPEVTLPLSAASLREIDIRG 287

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 77/313 (24%), Positives = 118/313 (37%), Gaps = 63/313 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG---VYPVRP-- 103
           KA  Y   G  D  I++ E+P   VK  +V +K+    I  SD++         P     
Sbjct: 2   KAARYH--GRKD--IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHP 57

Query: 104 -----KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------- 137
                  P   G+E  G V  VGS VT    GD V+  P                     
Sbjct: 58  HLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSL 117

Query: 138 ------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLN 187
                    G +  YVV      HK+  + P+E AA  +V PL     A+R         
Sbjct: 118 GFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAA--LVEPLAVAWHAVRRSG----FK 171

Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247
            GD+ +  GA  I G   I   +  G   I I+ +   S+  +E  + LGA  V   +++
Sbjct: 172 PGDTALVLGAGPI-GLLTILALKAAGASKI-IVSEP--SEARRELAEELGATIVLDPTEV 227

Query: 248 EVKNVKGLLANLPEPALGFNCVG----GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTS 303
           +V      L       + F+C G     ++A   L+     GT V    + +KPI+ + +
Sbjct: 228 DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRP---RGTAVNV-AIWEKPISFNPN 283

Query: 304 AFIFKDLSLKGFW 316
             + K+ +L G  
Sbjct: 284 DLVLKEKTLTGSI 296

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 62.9 bits (154), Expect = 4e-11
 Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 23/277 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E +    S+  +  LP  ++ E DV +++  + +N  D     G   V    P  
Sbjct: 2   KALVVEEQDGGVSL-FLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHT 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP-----SPPSSGTWQSYV-VKDQSVW-HKVSKDS 161
            G +  G V  V S   R   GD V+         + G +  YV V   + W   + +  
Sbjct: 61  PGIDAAGTV--VSSDDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVP--ADWVVPLPEGL 116

Query: 162 PMEYAATIIVNPLTA----LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
            +  A  +     TA     R+ ++  T   G  +V  GAT  VG   + I    G +++
Sbjct: 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV-TGATGGVGSIAVAILAKLG-YTV 174

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
             +    G +E  + LK LGA EV     L  ++ K LL      A   + VGG+  + +
Sbjct: 175 VAL---TGKEEQADYLKSLGASEVLDREDLLDESKKPLLK--ARWAGAIDTVGGDVLANL 229

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           LK    GG + + G  +   +T +   FI + +SL G
Sbjct: 230 LKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLG 266

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 87/347 (25%), Positives = 140/347 (40%), Gaps = 81/347 (23%)

Query: 49  KAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+V E+ GP +   +++ E+P  E    +V +K+ A  +  +D++ +EG  P  PK+P 
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPL 60

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSS-------------------------- 140
           + G+E VG V +VG  VTR + GD V +P   S+                          
Sbjct: 61  IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVD 120

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL--------TALRMLEDFTTLNSGDSI 192
           G +  Y+V D+   + + +D   E AA     PL         AL++      L  G  +
Sbjct: 121 GGYAEYMVADERFAYPIPEDYDDEEAA-----PLLCAGIIGYRALKLAG----LKPGQRL 171

Query: 193 VQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
              G           +QIAR++G       R     + A+E    LGAD           
Sbjct: 172 ---GLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE----LGADWAGDSDD---- 220

Query: 251 NVKGLLANLPEP---ALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIF 307
                    PEP   A+ F  V G      L+ + +GG +V   G+    I     AF +
Sbjct: 221 -------LPPEPLDAAIIFAPV-GALVPAALRAVKKGGRVVL-AGIHMSDI----PAFDY 267

Query: 308 KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPF 354
           + L     W +K + S      ++  ++ L LA E  +K ++E  P 
Sbjct: 268 ELL-----WGEKTIRSVANLTRQDGEEF-LKLAAEIPIKPEVETYPL 308

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 62.2 bits (152), Expect = 9e-11
 Identities = 88/358 (24%), Positives = 142/358 (39%), Gaps = 76/358 (21%)

Query: 49  KAVV-YEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--PKV 105
           KA   YE   P     ++ ++P  E     V V++  A +  SD++ I+GV+      K+
Sbjct: 2   KAARLYEYGKPL----RLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKL 57

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVI-----------------------PSPPSSGT 142
           P   G+E  G V  VGS V  L  GD V+                          P  GT
Sbjct: 58  PFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGT 117

Query: 143 WQSY----VVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGD 190
              +    +V  + +        P+E A      PL         A++    +  L+ G 
Sbjct: 118 DGGFAEYLLVPSRRLVKLPRGLDPVEAA------PLADAGLTAYHAVKKALPY--LDPGS 169

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADEVFTESQLEV 249
           ++V  G    +G   +QI   R +    +I  DR  S+EA +  + LGAD V   S   V
Sbjct: 170 TVVVIGVGG-LGHIAVQIL--RALTPATVIAVDR--SEEALKLAERLGADHVLNASDDVV 224

Query: 250 KNVKGLLANLPEPALGFNCVGGNSASKV-LKFLSQGG--TMVTYGGMSKKPITVSTSAFI 306
           + V+ L       A+  + VG +    +  K L++GG   +V YGG       + TS  +
Sbjct: 225 EEVRELTGGRGADAV-IDFVGSDETLALAAKLLAKGGRYVIVGYGG----HGRLPTSDLV 279

Query: 307 FKDLSLKG-FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSK 363
             ++S+ G  W          T  R  +  ++ LA  GK+K ++   P  +   AL +
Sbjct: 280 PTEISVIGSLW---------GT--RAELVEVVALAESGKVKVEITKFPLEDANEALDR 326

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 71/315 (22%), Positives = 119/315 (37%), Gaps = 55/315 (17%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           ++A V    G P   I+ + LP  +++   V V++  A +  SD++ + G  P  P +P 
Sbjct: 1   ARAAVLTGPGKP-LEIREVPLP--DLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVP-LPI 56

Query: 108 VGGYEGVGEVYSVGSAVTR------LAPGDWVI--------------------------- 134
           + G+EGVG V ++G  VT       L  GD V                            
Sbjct: 57  ILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY 116

Query: 135 ------PSPPSSGTWQSYVV--KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 186
                   P  SG +  ++      ++  +V  + P E AA       T L  L+    +
Sbjct: 117 GHEASCDDPHLSGGYAEHIYLPPGTAIV-RVPDNVPDEVAAPANCALATVLAALDRAGPV 175

Query: 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTE 244
            +GD++V  GA   +G   +  A+  G   + I+ D  GS E  E  +  GAD      E
Sbjct: 176 GAGDTVVVQGA-GPLGLYAVAAAKLAGARRV-IVID--GSPERLELAREFGADATIDIDE 231

Query: 245 SQLEVKNVKGLLANLPEPA-LGFNCVGGNSA-SKVLKFLSQGGTMVTYG-GMSKKPITVS 301
                +            A +     G  +A  + L+ L +GGT V  G       + + 
Sbjct: 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLD 291

Query: 302 TSAFIFKDLSLKGFW 316
               + K+L++ G  
Sbjct: 292 PERIVRKNLTIIGVH 306

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 46  PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
             ++A V    G P   I+ ++L P   +  +V V++ A  +  +D + + G  P     
Sbjct: 1   MKTRAAVAREAGKPLE-IEEVDLDPP--RAGEVLVRITATGVCHTDAHTLSGDDPEG--F 55

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           PAV G+EG G V +VG  VT + PGD VI  
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILL 86

Length = 366

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 71/343 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVP 106
           +AV+    G  D ++   ++P       +V +++ A  +N +DIN  EG Y   V     
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 107 AVGGYEG-----------------VGEVYSVGSAVTRLAPGDWVI-------PSPPSS-- 140
           + G  E                  VG V +VG  V     G+ V+       P       
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD 121

Query: 141 ---------GTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGD 190
                    G +  Y VV  ++  + V+        AT   +  TA  MLE    + +G+
Sbjct: 122 IDYIGSERDGGFAEYTVVPAENA-YPVNSPLSDVELATFPCSYSTAENMLER-AGVGAGE 179

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
           +++  GA+  VG  ++Q+A+ RG   I +    AG+ +  E ++ LGAD V       + 
Sbjct: 180 TVLVTGASGGVGSALVQLAKRRGAIVIAV----AGAAKE-EAVRALGADTVILRDAPLLA 234

Query: 251 NVKGL-------LANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTS 303
           + K L       +A++         VGG     +L+ L  GG  VT G ++   + +   
Sbjct: 235 DAKALGGEPVDVVADV---------VGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLR 285

Query: 304 AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
               KDL+L G  L            R ++ Y+     EG+++
Sbjct: 286 TLYLKDLTLFGSTLG------TREVFRRLVRYI----EEGEIR 318

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 59.6 bits (145), Expect = 8e-10
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V      P S I+ IE+ P +  E  V +K++A  I  SD + + G        P +
Sbjct: 9   KAAVLWEPKKPFS-IEEIEVAPPKAHE--VRIKIVATGICRSDDHVVSGKLV--TPFPVI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP 135
            G+E  G V SVG  VT + PGD VIP
Sbjct: 64  LGHEAAGIVESVGEGVTTVKPGDKVIP 90

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 59.5 bits (145), Expect = 8e-10
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVVY   GP +  ++ +  P +E    D  V++    I  SD++   G     P    V
Sbjct: 2   KAVVYG--GPGNVAVEDVPDPKIE-HPTDAIVRITTTAICGSDLHMYRGRTGAEP--GLV 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI 134
            G+E +GEV  VGSAV  L  GD V+
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRVV 82

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 58.9 bits (143), Expect = 8e-10
 Identities = 52/195 (26%), Positives = 74/195 (37%), Gaps = 23/195 (11%)

Query: 57  GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI-----NRIEGVYPVRPKVPAVGGY 111
           GP    ++    P        V V++    +  SD+      R   VYP  P  P   G+
Sbjct: 3   GPGRFEVEEHPRP--TPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGP---GH 57

Query: 112 EGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIV 171
           EG G V ++G  V  LA GD V     S G +  Y + D            +        
Sbjct: 58  EGWGRVVALGPGVRGLAVGDRVAGL--SGGAFAEYDLADAD---HAVPLPSLLDGQAFPG 112

Query: 172 NPL-TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII-RDRAGSDEA 229
            PL  AL +      + +G ++   GA  I G   +Q+A   G   +  I R  A    A
Sbjct: 113 EPLGCALNVFR-RGWIRAGKTVAVIGAGFI-GLLFLQLAAAAGARRVIAIDRRPARLALA 170

Query: 230 KEKLKGLGADEVFTE 244
           +E    LGA EV T+
Sbjct: 171 RE----LGATEVVTD 181

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 58.7 bits (143), Expect = 1e-09
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 6/93 (6%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AVV E  GP   V++ +EL   + + ++V V+++A  I  +D+   +G  P     PAV 
Sbjct: 6   AVVREPGGPF--VLEDVEL--DDPRPDEVLVRIVATGICHTDLVVRDGGLPTPL--PAVL 59

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
           G+EG G V +VGSAVT L PGD V+ S  S G 
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGE 92

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)

Query: 49  KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KAV Y++  P   PD+++  I+LP  +    D+ V++ A  +NP D      + P     
Sbjct: 1   KAVGYKKPLPITDPDALVD-IDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP-EAGQ 58

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSY-VVKDQSVWHKVSKDSP 162
           P + G++  G V +VG  VT   PGD  W        G+   + +V ++ V HK  K   
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLS 117

Query: 163 MEYAATIIVNPLTALRMLEDFTTLN-----SGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
              AA + +  +TA  +L D   +N        +++  G    VG  +IQ+AR   +  +
Sbjct: 118 FAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQ--LTGL 175

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
            +I   A   E++E +  LGA  V   S+
Sbjct: 176 TVI-ATASRPESQEWVLELGAHHVIDHSK 203

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 66/246 (26%), Positives = 99/246 (40%), Gaps = 55/246 (22%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI--EGV--YPVRPK 104
           K+VV + +G     +    +P ++  ++DV VK+ ++ +  SDI RI   G   YP+   
Sbjct: 2   KSVVNDTDG--IVRVAESPIPEIK-HQDDVLVKVASSGLCGSDIPRIFKNGAHYYPI--- 55

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWV--IPSPP------------------------ 138
                G+E  G V +VGS V  L PGD V  +P  P                        
Sbjct: 56  ---TLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR 112

Query: 139 SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN--SGDSIVQNG 196
             G    Y+V  +     +  D P+E  A I   P+T    L  F       G +++  G
Sbjct: 113 RDGGNAEYIVVKRKNLFALPTDMPIEDGAFI--EPITV--GLHAFHLAQGCEGKNVIIIG 168

Query: 197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL---KGLGADEVFTESQLEVKNVK 253
           A +I G   IQ A   G  S+  I      D   EKL   K LGA + F   ++    ++
Sbjct: 169 AGTI-GLLAIQCAVALGAKSVTAI------DINSEKLALAKSLGAMQTFNSREMSAPQIQ 221

Query: 254 GLLANL 259
            +L  L
Sbjct: 222 SVLREL 227

Length = 347

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 16/154 (10%)

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
           AAT+ V  +TALR L     L  G  ++  GA+  VG+  +Q+A   G H + ++   A 
Sbjct: 111 AATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPAR 169

Query: 226 SDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG 285
           ++  +E      A+ V   S+L    V  ++ +          VGG   ++ L+ L+ GG
Sbjct: 170 AEGLRELG---AAEVVVGGSELSGAPVDLVVDS----------VGGPQLARALELLAPGG 216

Query: 286 TMVTYGGMSKKPITVSTSAFIFK--DLSLKGFWL 317
           T+V+ G  S +P   + +AF+       L  F+L
Sbjct: 217 TVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFL 250

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 25/207 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVP 106
           KA+V E+ G P+ V+K+ E+P  E K   V +++ A  +N S+I   +G  P    P+V 
Sbjct: 2   KAIVIEQPGGPE-VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVL 60

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQSVWHKVSK 159
              G E VGEV           PG  V         +    G++  Y +      + +  
Sbjct: 61  ---GIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFD--GSYAEYTLVPNEQVYAIDS 113

Query: 160 DSPMEYAATIIVNPLTALRMLEDFTTLN--SGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
           D      A +     TA   L  F +L    GD+++  G TS VG   +++A+  G    
Sbjct: 114 DLSWAELAALPETYYTAWGSL--FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVT 171

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTE 244
              R    S E    LK LGADEV  +
Sbjct: 172 ATTR----SPERAALLKELGADEVVID 194

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV++    P    ++ IEL  P   K  +V VK++A+ +  SD + + G  P+ P+ P +
Sbjct: 5   AVLWGPGQP--WEVEEIELDDP---KAGEVLVKLVASGLCHSDEHLVTGDLPM-PRYPIL 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS-PPSSGT 142
           GG+EG G V  VG  VT + PGD V+ S  P+ G 
Sbjct: 59  GGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGR 93

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 83/317 (26%), Positives = 127/317 (40%), Gaps = 84/317 (26%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVR 102
           KA+V  + GP     +++E+P  +    +V +K+LAA I  +D++    +Y        R
Sbjct: 2   KAIVKTKAGPG---AELVEVPVPKPGPGEVLIKVLAASICGTDVH----IYEWDEWAQSR 54

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP---SPPS--------------- 139
            K P + G+E  GEV  VG  VTR+  GD+V     I                       
Sbjct: 55  IKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG 114

Query: 140 ---SGTWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGD 190
               G +  YV V ++++W K  KD P E A+  I  PL     T L          SG 
Sbjct: 115 VDTDGCFAEYVVVPEENLW-KNDKDIPPEIAS--IQEPLGNAVHTVL------AGDVSGK 165

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
           S++  G   I G   I +A+  G   + I  D   +    E  K +GAD V    + +V 
Sbjct: 166 SVLITGCGPI-GLMAIAVAKAAGASLV-IASDP--NPYRLELAKKMGADVVINPREEDVV 221

Query: 251 NVKGLLANLPEPALGFNCVGGNSASKVLKF------LSQGGTMVTYGG-MS-----KKPI 298
            VK +               G     VL+       + QG   +T GG +S       P+
Sbjct: 222 EVKSVT-------------DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPV 268

Query: 299 TVS-TSAFIFKDLSLKG 314
            +   +  IFK L+++G
Sbjct: 269 DIDLNNLVIFKGLTVQG 285

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+VY   GP    I + E+P P     +D  V++ A  I  SD++   G  P   K   
Sbjct: 2   KALVYL--GPGK--IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVP-GAKHGM 56

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI 134
           + G+E VGEV  VGS V RL PGD V 
Sbjct: 57  ILGHEFVGEVVEVGSDVKRLKPGDRVS 83

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 56.1 bits (136), Expect = 9e-09
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 16/98 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKEN-DVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+VY   GP     +    P   ++E  D  VKML   I  +D++ ++G       VP 
Sbjct: 2   KALVYH--GPGKISWEDRPKP--TIQEPTDAIVKMLKTTICGTDLHILKG------DVPT 51

Query: 108 VG-----GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 140
           V      G+EGVG V  VGSAVT    GD V+ S  SS
Sbjct: 52  VTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISS 89

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 46/229 (20%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------- 101
           A+  ER G P   I++ ++P  E+   +V V ++AA +N +++    G  PV        
Sbjct: 17  AIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALG-EPVSTFAARQR 75

Query: 102 --RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------PSSG 141
             R +   +GG +  G V++VG  V     GD V+                     PS  
Sbjct: 76  RGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQR 135

Query: 142 TW----------QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSG 189
            W          Q  +V+   +  K    S  E AA ++V   TA RML  +   T+  G
Sbjct: 136 IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGA-TAYRMLFGWNPNTVKPG 194

Query: 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA 238
           D+++  GA+  +G   IQ+AR  G + + ++     S+E  E  + LGA
Sbjct: 195 DNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGA 239

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 69/302 (22%), Positives = 113/302 (37%), Gaps = 60/302 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV+         +    E+P  +  +++V +K+  A +   D+ +++G YP R K P +
Sbjct: 2   KAVILPGFKQGYRIE---EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP--------------------------SPPSSGT 142
            G+E VG V  VG  V    PGD V                                 G 
Sbjct: 58  LGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGF 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYA-------ATIIVNPLTALRMLEDFTTLNSGDSIVQN 195
           +  Y     +   KV  +   E A         +       LR       +  G++++  
Sbjct: 118 FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVY----RGLRRAG----VKKGETVLVT 169

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVK 253
           GA   VG   IQ+A+  G   I +      S E+K K+    AD V   S+   EVK + 
Sbjct: 170 GAGGGVGIHAIQVAKALGAKVIAVT-----SSESKAKIVSKYADYVIVGSKFSEEVKKIG 224

Query: 254 GLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVSTSAFIFKDLSL 312
           G         +    VG  +  + L+ L+ GG ++  G +   P  ++     I KD+ +
Sbjct: 225 G-------ADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEI 277

Query: 313 KG 314
            G
Sbjct: 278 IG 279

Length = 334

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 29/221 (13%)

Query: 143 WQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGA 197
           W S+ + D     K+  +     P+  A   +  P LTA   L +   +  G++++ N A
Sbjct: 88  WTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAA 147

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
              VG  + QIA+ +G   +      AGSDE    LK LG D  F       K VK L  
Sbjct: 148 AGAVGSVVGQIAKLKGCKVVGA----AGSDEKVAYLKKLGFDVAFN-----YKTVKSLEE 198

Query: 258 NLPEPAL-GFNC----VGGNSASKVLKFLSQGGTMVTYGGMSKK------PITVSTSAFI 306
            L + +  G++C    VGG  ++ V+  + + G +   G +S        P        I
Sbjct: 199 TLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVI 258

Query: 307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY 347
           +++L ++GF + +W    +    + ++ ++L    EGK++Y
Sbjct: 259 YQELRMEGFIVNRWQGEVRQKALKELLKWVL----EGKIQY 295

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 49  KAVVYEREGPPDS-------VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           +A V    G P         VI+ +EL P      +V VK+ AA +  SD++ I G  P 
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPP--GPGEVLVKIAAAGLCHSDLSVINGDRP- 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
           RP +P   G+E  G V  VG  VT L  GD V+
Sbjct: 59  RP-LPMALGHEAAGVVVEVGEGVTDLEVGDHVV 90

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 27/262 (10%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +K + + + G P+ V++ +E  P +  EN+V V+  A  IN  D     G+YP  P +P+
Sbjct: 2   AKRIEFHKHGGPE-VLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPS 59

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM---- 163
             G E  G V  VGS V  +  GD V+ +  + G + S         H V  D       
Sbjct: 60  GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSV--------HNVPADKAAILPD 111

Query: 164 ----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
               E AA   +  LT   +L     +   +  + + A   VG    Q A+  G   I  
Sbjct: 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGT 171

Query: 220 IRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
           +    GS +  ++ K  GA +V  + E  + V+ VK +        + ++ VG ++    
Sbjct: 172 V----GSAQKAQRAKKAGAWQVINYREENI-VERVKEITGGKKVRVV-YDSVGKDTWEAS 225

Query: 278 LKFLSQGGTMVTYGGMSKKPIT 299
           L  L + G MV++G  S  P+T
Sbjct: 226 LDCLQRRGLMVSFGNAS-GPVT 246

Length = 327

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS 122
           +  IE P      ND  V+  A     SD++ + G  P       + G+E VG V  VGS
Sbjct: 12  VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH-GMILGHEAVGVVEEVGS 70

Query: 123 AVTRLAPGDWVI 134
            V    PGD VI
Sbjct: 71  EVKDFKPGDRVI 82

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 9/122 (7%)

Query: 94  RIEGVYPVRPKVPAVG--GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ 151
            +EG+     K+P     GY  VG V  VGS VT   PGD V       G     VV   
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF----CFGPHAERVVVPA 62

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH 211
           ++   +    P E AA   +   TAL  + D      G+ +   G   +VG    Q+A+ 
Sbjct: 63  NLLVPLPDGLPPERAALTALAA-TALNGVRD-AEPRLGERVAVVGL-GLVGLLAAQLAKA 119

Query: 212 RG 213
            G
Sbjct: 120 AG 121

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 58/292 (19%)

Query: 51  VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD------INRIEGVYPVRPK 104
           VV + E      +K   L   ++ E DV +++  + +N  D        +I   YP  P 
Sbjct: 5   VVEKDEDDVSVSVK--NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPG 62

Query: 105 VPAVG--------GYEGVGEV----YSVG-------SAVTRLAPGDWVIPSPPSSGTWQS 145
           +   G         ++   EV    Y +G       S   R+ P +WV+P P        
Sbjct: 63  IDLAGTVVESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARV-PAEWVVPLP-------- 113

Query: 146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTA---LRMLEDFTTLNSGDSIVQNGATSIVG 202
                        K   ++ A  +     TA   +  LE+         ++  GAT  VG
Sbjct: 114 -------------KGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVG 160

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP 262
              + I    G   +       G  +A + LK LGA EV    +L+ +++K L       
Sbjct: 161 SLAVSILAKLGYEVVA----STGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAG 216

Query: 263 ALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           A+  + VGG + + +L  L  GG++   G      +  +   FI + ++L G
Sbjct: 217 AV--DPVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLG 266

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 70/337 (20%), Positives = 126/337 (37%), Gaps = 74/337 (21%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-----------PVRPKVP 106
            P   ++ +E+   +    +V VK+ A  +  SD++  +G Y               K+P
Sbjct: 8   EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLP 67

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI---------------------PSPPSSGTWQ- 144
            V G+E VGEV +VG     +  GD V+                         + G +Q 
Sbjct: 68  LVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQD 127

Query: 145 ----SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200
                YV+   S +           AAT+  + LTA   ++    L + + +V  GA   
Sbjct: 128 GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGG- 186

Query: 201 VGQCIIQIAR---HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLL 256
           +G   + + +      I  ++I       +   E  K  GAD V   S  +  K +    
Sbjct: 187 LGLMALALLKALGPANIIVVDI------DEAKLEAAKAAGADVVVNGSDPDAAKRIIKAA 240

Query: 257 ANLPEPALGFNCVGGNSASKV-LKFLSQGGTMVT---YGGMSKKPITVSTSAFIFKDLSL 312
               +  + F  V  ++ + +    L++GG +V    +GG      T+       + L++
Sbjct: 241 GGGVDAVIDF--VNNSATASLAFDILAKGGKLVLVGLFGG----EATLPLPLLPLRALTI 294

Query: 313 KGFW---LQKWLSSEKATECRNMIDYLLCLAREGKLK 346
           +G +   L+         E R ++     LA+ GKLK
Sbjct: 295 QGSYVGSLE---------ELRELVA----LAKAGKLK 318

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+V+   G  D  +++ E+P P      D  V++ A  I  SD++   G  P   K   
Sbjct: 2   KALVWH--GKGD--VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIP-GMKKGD 56

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSSGT 142
           + G+E +G V  VG  V  L  GD V +P   + G 
Sbjct: 57  ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGE 92

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 76/296 (25%), Positives = 117/296 (39%), Gaps = 54/296 (18%)

Query: 57  GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN--RIEGVYPVRPKVPAVGGYEGV 114
              D  +++ E P  E    +V V++ A  I  SD++  +  G   VR + P V G+E  
Sbjct: 5   AAGD--LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVS 62

Query: 115 GEVYSVGSAVTRLAPGDWVI--PSPPS-----------------------------SGTW 143
           G V +VG  VT LAPG  V   PS P                               G +
Sbjct: 63  GVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGF 122

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGATS 199
           + Y+V D S    +     +  AA  +  PL     A+    D      G  ++  GA  
Sbjct: 123 REYLVVDASQCVPLPDGLSLRRAA--LAEPLAVALHAVNRAGDLA----GKRVLVTGAGP 176

Query: 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259
           I G  ++  AR  G   I +  D A  D      + +GADE      L    +    A+ 
Sbjct: 177 I-GALVVAAARRAGAAEI-VATDLA--DAPLAVARAMGADETV---NLARDPLAAYAADK 229

Query: 260 PEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
            +  + F   G  +A +  L+ +  GGT+V   GM   P+ +  +A + K+L L+G
Sbjct: 230 GDFDVVFEASGAPAALASALRVVRPGGTVVQV-GMLGGPVPLPLNALVAKELDLRG 284

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 45/232 (19%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN----------PSDINRIEGVY 99
           A+  ER+G P   I++  +P  E+   +V V ++AA +N          P         Y
Sbjct: 12  AIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKY 71

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS-------PPSSGTWQSYVVKDQS 152
                   + G +  G V+ VG  VTR   GD V+ S        P        +  +Q 
Sbjct: 72  GKLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQR 131

Query: 153 VW-----------HKVSKDSPM---------EYAATIIVNPLTALRMLEDFT--TLNSGD 190
           +W             + KD  +         E AA   +   TA R L  +    +  GD
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGD 191

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV 241
           +++  GA   +G    Q+AR  G + + ++     S   K E  + LGA+ V
Sbjct: 192 NVLIWGAAGGLGSYATQLARAGGGNPVAVV-----SSPEKAEYCRSLGAEAV 238

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KAVV++  GP D  +++ E+P P      D  VK+ AA I  SD++   G  P  P    
Sbjct: 2   KAVVFK--GPGD--VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP--GF 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           V G+E VGEV  VG  V  L  GD V+  
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSP 84

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 57/244 (23%), Positives = 87/244 (35%), Gaps = 60/244 (24%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +   PP   I+ I +P    KE ++ +++ A  +  SD++ ++G  P  P  P V
Sbjct: 2   KAAVLKGPNPP-LTIEEIPVPRP--KEGEILIRVAACGVCHSDLHVLKGELPFPP--PFV 56

Query: 109 GGYEGVGEVYSVGSAVT---RLAPGD-----WVIP------------------------- 135
            G+E  GEV  VG  V     L+ GD     +++P                         
Sbjct: 57  LGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116

Query: 136 --------------SPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 177
                           P    S G    Y V   +    + +      +A +     TA 
Sbjct: 117 GTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAY 176

Query: 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG 237
             L+    +  G+++   G    VG   IQ+A+  G   I I  D    DE   K K LG
Sbjct: 177 GALKHAADVRPGETVAVIGVGG-VGSSAIQLAKAFGASPI-IAVDV--RDEKLAKAKELG 232

Query: 238 ADEV 241
           A   
Sbjct: 233 ATHT 236

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 50.2 bits (121), Expect = 7e-07
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 21/95 (22%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI----------NRIEGV 98
           KA+V  +  P    + + ++P  E   NDV +K+    I  +D+            I   
Sbjct: 2   KALVKLKAEPG---LWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTI--- 55

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
                 VP V G+E VGEV  VGS VT    GD V
Sbjct: 56  -----PVPMVVGHEFVGEVVEVGSEVTGFKVGDRV 85

Length = 341

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 75/365 (20%), Positives = 122/365 (33%), Gaps = 108/365 (29%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN--RIEGVYPVRPKVPAVGGYEGVGE 116
               ++        +  +DV +K+    +  SD++  R E      P VP   G+E VG 
Sbjct: 8   ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVP---GHEIVGI 64

Query: 117 VYSVGSAVTRLAPGDWV----------------------------------IPSPPSSGT 142
           V +VGS VT+   GD V                                       + G 
Sbjct: 65  VVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGG 124

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAAT-----IIV-NPLTALRMLEDFTTLNSGDSIVQNG 196
           +  ++V D+    K+ +      AA      I V +PL                   +NG
Sbjct: 125 YADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL------------------KRNG 166

Query: 197 ATS-----IVGQCI-------IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VF 242
                   +VG  I       ++ A+  G       R  +  ++A +    LGADE    
Sbjct: 167 VGPGKRVGVVG--IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK----LGADEFIAT 220

Query: 243 TESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVS 301
            + +   K    L   +       + V  +      L  L  GGT+V   G  ++P+ V 
Sbjct: 221 KDPEAMKKAAGSLDLII-------DTVSASHDLDPYLSLLKPGGTLVLV-GAPEEPLPVP 272

Query: 302 TSAFIFKDLSLKGFWLQKWLS---SEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQ 358
               IF   S+ G       S     K T  + M+D     A E  +K  +E++P +   
Sbjct: 273 PFPLIFGRKSVAG-------SLIGGRKET--QEMLD----FAAEHGIKPWVEVIPMDGIN 319

Query: 359 TALSK 363
            AL +
Sbjct: 320 EALER 324

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 76/293 (25%), Positives = 116/293 (39%), Gaps = 60/293 (20%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGE 116
            ++ E+P  E    +V +K+LA  I  +D++    +Y        R K P V G+E  GE
Sbjct: 11  AELTEVPVPEPGPGEVLIKVLATSICGTDVH----IYNWDEWAQSRIKPPQVVGHEVAGE 66

Query: 117 VYSVGSAVTRLAPGDWV--------------------------IPSPPSSGTWQSY-VVK 149
           V  +G  V  +  GD+V                          I    + G +  Y VV 
Sbjct: 67  VVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVP 126

Query: 150 DQSVWHKVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208
            Q++W K  K  P EYA   I  PL  A+  +       SG S++  GA  I G   I +
Sbjct: 127 AQNIW-KNPKSIPPEYAT--IQEPLGNAVHTVLAGPI--SGKSVLVTGAGPI-GLMAIAV 180

Query: 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268
           A+  G + + I+ D   ++   E  K +GA  V    + +V      L +     +    
Sbjct: 181 AKASGAYPV-IVSDP--NEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEM 237

Query: 269 VGGNSASKVLKFLSQGGTMVTYGG------MSKKPITVS-TSAFIFKDLSLKG 314
            G   A      L QG   VT GG      +    +T+  T+  IFK L++ G
Sbjct: 238 SGAPKA------LEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYG 284

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 47.7 bits (114), Expect = 5e-06
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +A V    GP D  I++ E+P PV  +  D  ++++A  +  SD+    GV P R   P 
Sbjct: 2   RATVIH--GPGD--IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPI 57

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGT 142
             G+E VG V  VGS VT + PGD+VI P   S GT
Sbjct: 58  --GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGT 91

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 47.7 bits (114), Expect = 5e-06
 Identities = 66/300 (22%), Positives = 111/300 (37%), Gaps = 36/300 (12%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEV 117
           P D  +++ E P       +V +++ A+ +  SD++     +        + G+E  G V
Sbjct: 7   PGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVV 66

Query: 118 YSVGSAVTRLAPGDWVIP---------------------SPPSSGTWQS------YVVKD 150
            +VG  VT    GD V+                      S  ++  W        Y++  
Sbjct: 67  VAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVP 126

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIAR 210
           +     +  D      A ++    TA   L     ++  D+++  GA   VG   + +AR
Sbjct: 127 EKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGP-VGLGALMLAR 184

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270
             G   + I  D   S E  E  K LGAD V    Q +V+ ++ L +      +   C G
Sbjct: 185 ALGAEDV-IGVDP--SPERLELAKALGADFVINSGQDDVQEIRELTSGAG-ADVAIECSG 240

Query: 271 GNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFW-LQKWLSSEKATE 328
             +A    L+ +   G +V  G   +  I VS +  I K  +L G W        E A  
Sbjct: 241 NTAARRLALEAVRPWGRLVLVGEGGELTIEVS-NDLIRKQRTLIGSWYFSVPDMEECAEF 299

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 46.8 bits (112), Expect = 9e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V    G P S+ ++   PP   K  +V +K+LA  +  +D   + G  P     P 
Sbjct: 3   CKAAVAWEAGKPLSIEEVEVAPP---KAGEVRIKILATGVCHTDAYTLSGADP-EGLFPV 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           + G+EG G V SVG  VT + PGD VIP
Sbjct: 59  ILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 48/301 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A VYE  G P   +++ E+P  E   + V V++ A  +  SD +  +G  P    +P V
Sbjct: 2   RAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHV 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--------------------------IPSPPSSGT 142
            G+E  G V  VG  V+R   GD V                           P     G+
Sbjct: 58  PGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGS 117

Query: 143 WQSYVVKDQSVWH--KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200
           +  YV   ++  +  ++  D     AA +     TA R L     +  G+ +  +G    
Sbjct: 118 FAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGG- 176

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-----VKNVKGL 255
           VG   + IA   G   I +  D    D+  E  + LGA      S++E     V+++ G 
Sbjct: 177 VGLSAVMIASALGARVIAV--DI--DDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232

Query: 256 LANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS--TSAFIFKDLSLK 313
            A++   ALG      NS    +  L + G  V  G    +   V+      + ++L + 
Sbjct: 233 GAHVSVDALGIPETCRNS----VASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIV 288

Query: 314 G 314
           G
Sbjct: 289 G 289

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 45/206 (21%)

Query: 77  DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV--- 133
           DV +K++   I  +D+++I+    +    P V G+E VGEV  VGS V++   GD V   
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMS-NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVG 94

Query: 134 -----------------------IPS--------PPSSGTWQSYVVKDQSVWHKVSKDSP 162
                                  I S         P+ G + S +V DQ    K+ +   
Sbjct: 95  VIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMA 154

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINII 220
            E AA ++   +T    L  F    SG    I+  G    VG   ++IA+  G H + +I
Sbjct: 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGG---VGHMGVKIAKAMG-HHVTVI 210

Query: 221 RDRAGSDEAKEK-LKGLGADEVFTES 245
              + SD+ +E+ L+ LGAD+    S
Sbjct: 211 ---SSSDKKREEALEHLGADDYLVSS 233

Length = 357

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 44.5 bits (106), Expect = 5e-05
 Identities = 78/288 (27%), Positives = 110/288 (38%), Gaps = 46/288 (15%)

Query: 49  KAVVYEREGPPDSVIKMIE-LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+V E+E     V   +E L   ++ E DV +K+  + +N  D   I G   V    P 
Sbjct: 1   KALVVEKED--GKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPM 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG------TWQSYVVKDQSVWHKVSKD- 160
           + G +  G V  V S   R   GD VI     +G          Y     S + +V  D 
Sbjct: 59  IPGIDAAGTV--VSSEDPRFREGDEVI----VTGYGLGVSHDGGY-----SQYARVPADW 107

Query: 161 --------SPMEYAATIIVNPLTA----LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208
                   S  E A  +     TA    + +  +  T   G  ++  GAT  VG   + I
Sbjct: 108 LVPLPEGLSLRE-AMALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAI 165

Query: 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268
               G   +       G  E ++ LK LGA EV     L     K L       A+  + 
Sbjct: 166 LSKLGYEVVAST----GKAEEEDYLKELGASEVIDREDLS-PPGKPLEKERWAGAV--DT 218

Query: 269 VGGNSASKVLKFLSQGGTMVTYG--GMSKKPITVSTSAFIFKDLSLKG 314
           VGG++ + VL  L  GG +   G  G    P TV    FI + +SL G
Sbjct: 219 VGGHTLANVLAQLKYGGAVAACGLAGGPDLPTTV--LPFILRGVSLLG 264

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV +E   P   VI+ +E+ P +  E  V +K+L   +  +D+   E      P  P + 
Sbjct: 6   AVAWEAGKP--LVIEEVEVAPPQAME--VRIKILHTSLCHTDVYFWEAKGQT-PLFPRIL 60

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIP 135
           G+E  G V SVG  VT L PGD V+P
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLP 86

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P  V++ I + P +  E  V +K+L   I  +D++  +G    +   P +
Sbjct: 12  KAAVAWGPGEP-LVMEEIRVDPPQKME--VRIKILYTSICHTDLSAWKGENEAQRAYPRI 68

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP 135
            G+E  G V SVG  V  L  GD VIP
Sbjct: 69  LGHEAAGIVESVGEGVEDLKAGDHVIP 95

Length = 381

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-----EGVYPVR 102
           S+A V    G P   +K+ E+     ++ +V V+++A  +  +D   +     EGV+PV 
Sbjct: 2   SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPV- 57

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                + G+EG G V +VG  VT +  GD VIP
Sbjct: 58  -----ILGHEGAGIVEAVGEGVTSVKVGDHVIP 85

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPA 107
             V E  GP + V + + LP       +V +K+ A  +  SD    EG  P    P+VP 
Sbjct: 4   VQVTEPGGPLELVERDVPLPG----PGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVP- 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV 133
             G+E VG + +VG  V+R   GD V
Sbjct: 59  --GHEVVGRIDAVGEGVSRWKVGDRV 82

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-----VGGYE 112
           P    ++++++P  E    +V V+ L   +  +D   + G Y      P      V G+E
Sbjct: 8   PGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEY---GTAPPGEDFLVLGHE 64

Query: 113 GVGEVYSVGSAVTRLAPGDWVIP 135
            +G V  VG   + L+PGD V+P
Sbjct: 65  ALGVVEEVGDG-SGLSPGDLVVP 86

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 42/265 (15%)

Query: 112 EGVGEVYSVGSAVTRLAPGDWVIPSPPSSG--TWQSYVV----KDQSVWHKVSKDSPMEY 165
           EG G    V S      PGD +      SG   W+ Y +     +Q    ++  D P+ Y
Sbjct: 81  EGFGVSKVVDSDDPNFKPGDLI------SGITGWEEYSLIRSSDNQLRKIQLQDDIPLSY 134

Query: 166 AATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
              ++     TA     +  +   GDS+  + A+  VGQ + Q+A+  G + +      A
Sbjct: 135 HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVG----SA 190

Query: 225 GSDEAKEKLKG-LGADEVFT---ESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLK 279
           GS +  + LK  LG DE F    E  L+      L    PE   + F+ VGG+     L 
Sbjct: 191 GSSQKVDLLKNKLGFDEAFNYKEEPDLDA----ALKRYFPEGIDIYFDNVGGDMLDAALL 246

Query: 280 FLSQGGTMVTYGGMSKKPITVSTS-----AFIFKDLSLKGFWLQKWLSSEKATECRNMID 334
            +   G +   G +S   ++ S         I K + ++GF     L S+        ++
Sbjct: 247 NMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGF-----LQSDYLHLFPQFLE 301

Query: 335 YLLCLAREGKLKY--DM----ELVP 353
            +    ++GK+ Y  DM    E  P
Sbjct: 302 NVSRYYKQGKIVYIEDMSEGLESAP 326

Length = 348

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           + V+   +G P  +  ++   P      +V V + A  +  +D++  EG   +  + P +
Sbjct: 3   RGVIARSKGAPVELETIVVPDP---GPGEVIVDIQACGVCHTDLHYREG--GINDEFPFL 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI 134
            G+E  G V +VG  VT +APGD+V+
Sbjct: 58  LGHEAAGVVEAVGEGVTDVAPGDYVV 83

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 67  ELPPVEVKENDVCVKMLAAPINPSDINRIEG------VYPVRPKVPAVGGYEGVGEVYSV 120
           ++P   +K +++ +++ A  I  SDI+  E       +YP   + P V G+E  G V   
Sbjct: 43  DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKT 102

Query: 121 GSAVTRLAPGDWV 133
           G  V     GD V
Sbjct: 103 GKNVKNFEKGDPV 115

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	378
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.74
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.46
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.38
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.35
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.53
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.49
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.24
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.23
PLN02494	477	adenosylhomocysteinase	98.23
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.09
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.96
PRK08324	681	short chain dehydrogenase; Validated	97.93
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.93
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.92
PRK12742	237	oxidoreductase; Provisional	97.92
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.91
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.87
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.77
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.76
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.66
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.63
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.63
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.61
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.61
PRK07109	334	short chain dehydrogenase; Provisional	97.54
PRK05993	277	short chain dehydrogenase; Provisional	97.53
PLN03209	576	translocon at the inner envelope of chloroplast su	97.53
PRK06139	330	short chain dehydrogenase; Provisional	97.51
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.51
PRK05693	274	short chain dehydrogenase; Provisional	97.49
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.48
PRK06182	273	short chain dehydrogenase; Validated	97.45
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.44
PRK12939	250	short chain dehydrogenase; Provisional	97.42
PRK07060	245	short chain dehydrogenase; Provisional	97.4
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.4
PRK06198	260	short chain dehydrogenase; Provisional	97.39
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.36
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.36
PRK08339	263	short chain dehydrogenase; Provisional	97.33
PRK08265	261	short chain dehydrogenase; Provisional	97.28
PRK05866	293	short chain dehydrogenase; Provisional	97.26
PRK07806	248	short chain dehydrogenase; Provisional	97.25
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.25
PRK06128	300	oxidoreductase; Provisional	97.24
PRK07326	237	short chain dehydrogenase; Provisional	97.21
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.2
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.19
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.19
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.19
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.18
PRK07832	272	short chain dehydrogenase; Provisional	97.16
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.15
PRK06125	259	short chain dehydrogenase; Provisional	97.14
PRK06181	263	short chain dehydrogenase; Provisional	97.14
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.14
PRK09291	257	short chain dehydrogenase; Provisional	97.14
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.12
PRK05872	296	short chain dehydrogenase; Provisional	97.12
PRK12828	239	short chain dehydrogenase; Provisional	97.11
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.09
PRK12829	264	short chain dehydrogenase; Provisional	97.08
PRK07814	263	short chain dehydrogenase; Provisional	97.06
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.06
PRK08267	260	short chain dehydrogenase; Provisional	97.06
PRK06196	315	oxidoreductase; Provisional	97.05
PRK12367	245	short chain dehydrogenase; Provisional	97.05
PRK06914	280	short chain dehydrogenase; Provisional	97.05
PRK06057	255	short chain dehydrogenase; Provisional	97.05
PRK06194	287	hypothetical protein; Provisional	97.04
PRK05876	275	short chain dehydrogenase; Provisional	97.04
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.04
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.02
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.02
PRK07825	273	short chain dehydrogenase; Provisional	97.0
PRK05867	253	short chain dehydrogenase; Provisional	96.99
PRK07677	252	short chain dehydrogenase; Provisional	96.97
PRK06949	258	short chain dehydrogenase; Provisional	96.97
PRK06701	290	short chain dehydrogenase; Provisional	96.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.97
PRK06172	253	short chain dehydrogenase; Provisional	96.96
PRK07478	254	short chain dehydrogenase; Provisional	96.96
PRK07904	253	short chain dehydrogenase; Provisional	96.96
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.95
PRK07831	262	short chain dehydrogenase; Provisional	96.95
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.94
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.93
PRK05854	313	short chain dehydrogenase; Provisional	96.92
PRK07062	265	short chain dehydrogenase; Provisional	96.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.91
PRK07576	264	short chain dehydrogenase; Provisional	96.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.9
PRK12937	245	short chain dehydrogenase; Provisional	96.89
PRK07890	258	short chain dehydrogenase; Provisional	96.89
PRK06720	169	hypothetical protein; Provisional	96.89
PRK07774	250	short chain dehydrogenase; Provisional	96.88
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.88
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.87
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.87
PRK06484	520	short chain dehydrogenase; Validated	96.86
PRK06138	252	short chain dehydrogenase; Provisional	96.86
PRK06197	306	short chain dehydrogenase; Provisional	96.85
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.85
PRK09072	263	short chain dehydrogenase; Provisional	96.85
PRK08264	238	short chain dehydrogenase; Validated	96.85
PRK08862	227	short chain dehydrogenase; Provisional	96.84
PRK06483	236	dihydromonapterin reductase; Provisional	96.84
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.83
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.82
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.82
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.81
PRK07063	260	short chain dehydrogenase; Provisional	96.79
PRK08177	225	short chain dehydrogenase; Provisional	96.78
CHL00194	317	ycf39 Ycf39; Provisional	96.78
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.77
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.77
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.77
PRK08628	258	short chain dehydrogenase; Provisional	96.76
PRK06500	249	short chain dehydrogenase; Provisional	96.76
PRK08017	256	oxidoreductase; Provisional	96.76
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.75
PRK12747	252	short chain dehydrogenase; Provisional	96.75
PRK07454	241	short chain dehydrogenase; Provisional	96.75
PRK07985	294	oxidoreductase; Provisional	96.75
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.74
PRK08589	272	short chain dehydrogenase; Validated	96.74
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.73
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.73
PRK06180	277	short chain dehydrogenase; Provisional	96.72
PLN02253	280	xanthoxin dehydrogenase	96.71
PRK06841	255	short chain dehydrogenase; Provisional	96.71
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.71
PRK07035	252	short chain dehydrogenase; Provisional	96.71
PRK08303	305	short chain dehydrogenase; Provisional	96.7
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.69
KOG0725	270	consensus Reductases with broad range of substrate	96.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.68
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.68
PRK07024	257	short chain dehydrogenase; Provisional	96.67
PRK08643	256	acetoin reductase; Validated	96.66
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.65
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.64
PLN02780	320	ketoreductase/ oxidoreductase	96.64
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.63
PRK07791	286	short chain dehydrogenase; Provisional	96.63
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.62
PRK06114	254	short chain dehydrogenase; Provisional	96.62
PRK09242	257	tropinone reductase; Provisional	96.58
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.57
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.57
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.57
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.56
PRK05717	255	oxidoreductase; Validated	96.55
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.54
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.54
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.52
PRK08703	239	short chain dehydrogenase; Provisional	96.52
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.51
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.51
PRK07856	252	short chain dehydrogenase; Provisional	96.5
PRK10538	248	malonic semialdehyde reductase; Provisional	96.5
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.5
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.49
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.47
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.47
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	96.46
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.46
PRK07775	274	short chain dehydrogenase; Provisional	96.46
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.46
PRK08226	263	short chain dehydrogenase; Provisional	96.46
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.45
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.45
PRK05875	276	short chain dehydrogenase; Provisional	96.44
PRK08219	227	short chain dehydrogenase; Provisional	96.43
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.43
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.42
PRK06940	275	short chain dehydrogenase; Provisional	96.42
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.41
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.4
PRK06482	276	short chain dehydrogenase; Provisional	96.4
PRK12743	256	oxidoreductase; Provisional	96.39
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.38
PRK08278	273	short chain dehydrogenase; Provisional	96.38
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.36
PRK08263	275	short chain dehydrogenase; Provisional	96.35
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.35
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.33
PRK09186	256	flagellin modification protein A; Provisional	96.32
PRK05650	270	short chain dehydrogenase; Provisional	96.32
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.29
PRK07067	257	sorbitol dehydrogenase; Provisional	96.29
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.28
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.27
PRK09134	258	short chain dehydrogenase; Provisional	96.27
PRK09135	249	pteridine reductase; Provisional	96.26
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.25
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.23
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.23
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.23
PRK06179	270	short chain dehydrogenase; Provisional	96.23
PRK05599	246	hypothetical protein; Provisional	96.22
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.22
PRK06398	258	aldose dehydrogenase; Validated	96.2
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.2
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.19
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.18
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.17
PRK07074	257	short chain dehydrogenase; Provisional	96.17
PRK07041	230	short chain dehydrogenase; Provisional	96.16
PRK06484	520	short chain dehydrogenase; Validated	96.16
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.15
PRK12744	257	short chain dehydrogenase; Provisional	96.15
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.13
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.13
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	96.12
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.12
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.1
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.1
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.09
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.08
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.07
PRK04148	134	hypothetical protein; Provisional	96.07
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.05
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.04
PRK05855	582	short chain dehydrogenase; Validated	96.04
PRK08251	248	short chain dehydrogenase; Provisional	96.04
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.03
PLN02240	352	UDP-glucose 4-epimerase	96.02
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.01
PRK06953	222	short chain dehydrogenase; Provisional	96.01
PRK12746	254	short chain dehydrogenase; Provisional	96.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.99
PRK06523	260	short chain dehydrogenase; Provisional	95.99
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.99
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.96
PRK07578	199	short chain dehydrogenase; Provisional	95.92
PRK05884	223	short chain dehydrogenase; Provisional	95.91
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.9
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.89
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.84
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.83
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.82
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	95.81
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	95.81
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.81
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.8
KOG1208	314	consensus Dehydrogenases with different specificit	95.8
COG4122	219	Predicted O-methyltransferase [General function pr	95.8
PRK06101	240	short chain dehydrogenase; Provisional	95.78
PRK07102	243	short chain dehydrogenase; Provisional	95.77
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.77
PRK12827	249	short chain dehydrogenase; Provisional	95.76
PLN00198	338	anthocyanidin reductase; Provisional	95.76
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.76
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.74
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.73
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.71
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.68
PLN02653	340	GDP-mannose 4,6-dehydratase	95.68
PLN02686	367	cinnamoyl-CoA reductase	95.67
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.66
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.66
PRK07201	657	short chain dehydrogenase; Provisional	95.66
PLN02928	347	oxidoreductase family protein	95.65
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.62
PLN02650	351	dihydroflavonol-4-reductase	95.62
PLN02214	342	cinnamoyl-CoA reductase	95.61
PRK08309	177	short chain dehydrogenase; Provisional	95.6
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.6
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.59
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.58
PRK11207	197	tellurite resistance protein TehB; Provisional	95.57
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.56
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.55
PRK10675	338	UDP-galactose-4-epimerase; Provisional	95.54
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.52
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.52
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.5
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.49
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.47
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.47
PRK06123	248	short chain dehydrogenase; Provisional	95.42
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.41
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.38
PLN02427	386	UDP-apiose/xylose synthase	95.37
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	95.33
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	95.33
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	95.31
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.3
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.3
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.29
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.26
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.26
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.25
PRK08328	231	hypothetical protein; Provisional	95.25
PLN02583	297	cinnamoyl-CoA reductase	95.22
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.22
PLN03139	386	formate dehydrogenase; Provisional	95.21
PRK07574	385	formate dehydrogenase; Provisional	95.2
PLN03075	296	nicotianamine synthase; Provisional	95.18
PLN00016	378	RNA-binding protein; Provisional	95.16
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.16
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.15
PRK07069	251	short chain dehydrogenase; Validated	95.15
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.15
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.13
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
KOG1252	362	consensus Cystathionine beta-synthase and related	95.08
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.06
PLN02476	278	O-methyltransferase	95.05
PRK14967	223	putative methyltransferase; Provisional	95.05
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
PRK13243	333	glyoxylate reductase; Reviewed	95.0
PRK07402	196	precorrin-6B methylase; Provisional	95.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.98
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.96
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.94
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.92
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	94.91
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.91
TIGR00438	188	rrmJ cell division protein FtsJ.	94.91
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.89
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.86
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.85
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	94.83
PRK07577	234	short chain dehydrogenase; Provisional	94.82
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.81
PLN02244	340	tocopherol O-methyltransferase	94.79
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.79
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.78
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.78
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.76
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	94.75
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.73
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.71
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.71
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.7
COG1028	251	FabG Dehydrogenases with different specificities (	94.68
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.66
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.65
PRK08317	241	hypothetical protein; Provisional	94.65
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.61
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.58
COG2910	211	Putative NADH-flavin reductase [General function p	94.57
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.57
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.53
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.51
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.5
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.5
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	94.49
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.49
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.48
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.48
PLN02695	370	GDP-D-mannose-3',5'-epimerase	94.46
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.44
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	94.44
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.43
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.42
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.4
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	94.39
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.35
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	94.34
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	94.32
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.29
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	94.28

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=4.5e-58  Score=412.24  Aligned_cols=307  Identities=28%  Similarity=0.365  Sum_probs=279.2

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +.+||++.+.+++++   +++.+++.|+|+++||+|+|+|+|+|++|++.+.|.++.. .+|++||||.+|+|+++|++|
T Consensus         1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V   76 (339)
T COG1064           1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGV   76 (339)
T ss_pred             CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCC
Confidence            467999999999998   7899999999999999999999999999999999999887 499999999999999999999


Q ss_pred             CCCCCCCEEee-CCCC--------------------------CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHH
Q 017064          125 TRLAPGDWVIP-SPPS--------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL  177 (378)
Q Consensus       125 ~~~~~Gd~V~~-~~~~--------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  177 (378)
                      ++|++||||.. +...                          +|+|+||+++|+.+++++|+++++++||.+.|++.|.|
T Consensus        77 ~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y  156 (339)
T COG1064          77 TGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY  156 (339)
T ss_pred             ccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence            99999999987 3311                          89999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHh
Q 017064          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLL  256 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~  256 (378)
                      ++|++ .+++||++|+|.|+ |++|++|+|+|+++|++|+++.    .+++|++.++++|++++++..+.+ .+.+++  
T Consensus       157 ~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~----~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~--  228 (339)
T COG1064         157 RALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAIT----RSEEKLELAKKLGADHVINSSDSDALEAVKE--  228 (339)
T ss_pred             eehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEe----CChHHHHHHHHhCCcEEEEcCCchhhHHhHh--
Confidence            99988 99999999999999 7999999999999999999999    589999999999999999977433 344444  


Q ss_pred             cCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC-CCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064          257 ANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY  335 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (378)
                          .+|++||+++...+..+++.|+++|+++++|... ....+++...++.+++++.|+..++.          .++++
T Consensus       229 ----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~----------~d~~e  294 (339)
T COG1064         229 ----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR----------ADLEE  294 (339)
T ss_pred             ----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH----------HHHHH
Confidence                2999999999777899999999999999999663 34455777888999999999987643          77899


Q ss_pred             HHHHHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          336 LLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       336 ~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++|..+|++++.+ +.++++|+++|++.|++++..| ++||++
T Consensus       295 ~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~g-R~Vi~~  337 (339)
T COG1064         295 ALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRG-RAVIDM  337 (339)
T ss_pred             HHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeee-EEEecC
Confidence            99999999999999 6999999999999999999999 999874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4.3e-54  Score=396.19  Aligned_cols=320  Identities=30%  Similarity=0.404  Sum_probs=284.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++.+...+.+.. +++.+.|.|.|+++||+|||+++|+|+.|.....|..+...++|+++|.|++|+|+++|++|++|
T Consensus         1 mka~~~~~~g~~~~-l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~   79 (326)
T COG0604           1 MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGF   79 (326)
T ss_pred             CeEEEEeccCCCce-eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence            68999999999877 99999999999999999999999999999999999744434689999999999999999999999


Q ss_pred             CCCCEEeeCC-C-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          128 APGDWVIPSP-P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       128 ~~Gd~V~~~~-~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      ++||||+... . .+|+|+||+.+|++.++++|+++|+++||+++++++|||+++.+..++++|++|||+||+|++|.++
T Consensus        80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a  159 (326)
T COG0604          80 KVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA  159 (326)
T ss_pred             CCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence            9999999984 2 2599999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG  284 (378)
Q Consensus       206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~  284 (378)
                      +|+||++|+++++++    +++++.++++++|+|+++++.+. +.+++++++++++ +|+|+|++|++.+..++.+|+++
T Consensus       160 iQlAk~~G~~~v~~~----~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~g-vDvv~D~vG~~~~~~~l~~l~~~  234 (326)
T COG0604         160 IQLAKALGATVVAVV----SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPG  234 (326)
T ss_pred             HHHHHHcCCcEEEEe----cCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCC-ceEEEECCCHHHHHHHHHHhccC
Confidence            999999998888877    47777779999999999998887 5678999999877 99999999999999999999999


Q ss_pred             CEEEEEecCC-CCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHH
Q 017064          285 GTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALS  362 (378)
Q Consensus       285 G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~~  362 (378)
                      |+++.+|..+ .....++...++.+.+...+.+....    .++...+.++++.+++++|.+++.++ +|||+|..++..
T Consensus       235 G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a  310 (326)
T COG0604         235 GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR----DPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAA  310 (326)
T ss_pred             CEEEEEecCCCCCccccCHHHHhhccEEEEEecceec----chHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHH
Confidence            9999999877 44555666777778888888876432    23667788999999999999999976 899999666665


Q ss_pred             HHHcc-CCCCCceEeeC
Q 017064          363 KALGL-HGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~-~~~g~kvvv~~  378 (378)
                      +...+ +..| |+|+++
T Consensus       311 ~~~~~~~~~G-Kvvl~~  326 (326)
T COG0604         311 HLLLERRTTG-KVVLKV  326 (326)
T ss_pred             HHHcccCCcc-eEEEeC
Confidence            55555 8889 999975

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-52  Score=360.98  Aligned_cols=315  Identities=24%  Similarity=0.263  Sum_probs=278.4

Q ss_pred             ccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        42 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      ...|.+.++|.+..+++..+ .++.+++.|+++++||+|+++++|+|++|++.+.|.++. .++|+++|||.+|+|+++|
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~-p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvG   81 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLS-PEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVG   81 (360)
T ss_pred             ccCchhhEEEEEECCCCCCC-cceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEEC
Confidence            34678889999999998655 788999999999999999999999999999999999998 5899999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCC---C-------------------------------CcccccceeccCCceEEcCCCCCHhhhh
Q 017064          122 SAVTRLAPGDWVIPSPP---S-------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~---~-------------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa  167 (378)
                      ++|++|++||||..-.-   +                               +|+|++|+++++.++++||++++.+.||
T Consensus        82 s~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aA  161 (360)
T KOG0023|consen   82 SNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAA  161 (360)
T ss_pred             CCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhcc
Confidence            99999999999864210   0                               6779999999999999999999999999


Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-c
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-Q  246 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~  246 (378)
                      .+.|++.|+|.+|.. .++.||++|.|.|+ |++|.+++|+||++|.+|+++.+.   +.+|.+.++.||||..++.. +
T Consensus       162 PlLCaGITvYspLk~-~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~---~~kkeea~~~LGAd~fv~~~~d  236 (360)
T KOG0023|consen  162 PLLCAGITVYSPLKR-SGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTS---SKKKEEAIKSLGADVFVDSTED  236 (360)
T ss_pred             chhhcceEEeehhHH-cCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCC---chhHHHHHHhcCcceeEEecCC
Confidence            999999999999987 88999999999999 669999999999999999999852   44677778889999999877 3


Q ss_pred             c-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhcccc
Q 017064          247 L-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK  325 (378)
Q Consensus       247 ~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (378)
                      . ..+.+.+.+++  .+|-|.+. ....+..++.+++++|++|++|.... +..++..++..+.+++.|+..++.     
T Consensus       237 ~d~~~~~~~~~dg--~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~-----  307 (360)
T KOG0023|consen  237 PDIMKAIMKTTDG--GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSR-----  307 (360)
T ss_pred             HHHHHHHHHhhcC--cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccH-----
Confidence            3 34667666665  46766665 45667899999999999999996654 788899999999999999988753     


Q ss_pred             HHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          326 ATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       326 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                           .+.++++++..++.++.+++..+++++++||++|++++..+ |.||++
T Consensus       308 -----ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~y-RfVvD~  354 (360)
T KOG0023|consen  308 -----KETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRY-RFVVDV  354 (360)
T ss_pred             -----HHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeE-EEEEEc
Confidence                 66889999999999999999999999999999999999998 999875

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-51  Score=357.15  Aligned_cols=311  Identities=23%  Similarity=0.277  Sum_probs=271.2

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEec
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG  121 (378)
                      ..+|+++++.++++    +++++.|.|++ .|+||+|++.++|||++|++.+.......+  +.|+++|||.+|+|.++|
T Consensus         2 ~~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG   77 (354)
T KOG0024|consen    2 AADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG   77 (354)
T ss_pred             CcccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence            34689999999998    89999999977 999999999999999999999987665543  579999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCCC---------------------------CcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064          122 SAVTRLAPGDWVIPSPPS---------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~~---------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      ++|+++++||||+.-+..                           +|++++|++.++++++|+|+++|++++|++. +++
T Consensus        78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs  156 (354)
T KOG0024|consen   78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS  156 (354)
T ss_pred             ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence            999999999999876532                           7999999999999999999999999999998 588


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HH---
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VK---  250 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~---  250 (378)
                      .+||+.+. +++++|++|||+|+ |++|+++...||++||..+++++.   .++|++.++++|++.+.+..... .+   
T Consensus       157 V~~HAcr~-~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~---~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~  231 (354)
T KOG0024|consen  157 VGVHACRR-AGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDL---VANRLELAKKFGATVTDPSSHKSSPQELA  231 (354)
T ss_pred             hhhhhhhh-cCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeec---CHHHHHHHHHhCCeEEeeccccccHHHHH
Confidence            89999986 99999999999999 999999999999999977777764   89999999999999998766533 33   


Q ss_pred             -HHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHH
Q 017064          251 -NVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE  328 (378)
Q Consensus       251 -~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (378)
                       .+++..+... +|++|||+|.. .++.++..++.+|+++++| ......++++.+...+++++.|++.+          
T Consensus       232 ~~v~~~~g~~~-~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry----------  299 (354)
T KOG0024|consen  232 ELVEKALGKKQ-PDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRY----------  299 (354)
T ss_pred             HHHHhhccccC-CCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeee----------
Confidence             3444444433 99999999975 4688999999999988888 44556788999999999999999864          


Q ss_pred             HHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          329 CRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       329 ~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .+..+..+++++++|++++.   ++.|+++++.+||+.+.+++..+.|+++.
T Consensus       300 ~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  300 CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence            22578899999999999865   67899999999999999999877799986

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=6.9e-51  Score=341.29  Aligned_cols=324  Identities=24%  Similarity=0.290  Sum_probs=291.7

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .|+..|.+++...|+++. +++++.|.|+|+++|.+||-.|+|+|..|..+..|.+. .++.|++||.|.+|+|+.+|++
T Consensus         5 ~p~~~k~i~v~e~Ggydv-lk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~g   82 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDV-LKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEG   82 (336)
T ss_pred             CCchheEEEEeccCCcce-EEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCC
Confidence            455568899999998865 99999999999999999999999999999999999985 3478999999999999999999


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      |+++++||||+...+ .|.|+++..+|...++++|+.+++++||++.+.++|||.-+++..++++|++||||.|+|++|+
T Consensus        83 vtdrkvGDrVayl~~-~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGl  161 (336)
T KOG1197|consen   83 VTDRKVGDRVAYLNP-FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGL  161 (336)
T ss_pred             ccccccccEEEEecc-chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHH
Confidence            999999999998875 6999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      ++.|++++.|+++|+++    ++.+|++.+++.|+.|.|+++.++ +.++.++++++| +|+++|++|.+.+..++.+|+
T Consensus       162 ll~Ql~ra~~a~tI~~a----sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~dt~~~sl~~Lk  236 (336)
T KOG1197|consen  162 LLCQLLRAVGAHTIATA----STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKDTFAKSLAALK  236 (336)
T ss_pred             HHHHHHHhcCcEEEEEe----ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccchhhHHHHHHhc
Confidence            99999999999999999    789999999999999999999876 588999999988 999999999999999999999


Q ss_pred             cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTAL  361 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~  361 (378)
                      +.|.+|.+|..++....+++..+..+.+.+....+..++  ..+..+.....+++.++.+|.+++.++ +|||+++.+|+
T Consensus       237 ~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi--~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~  314 (336)
T KOG1197|consen  237 PMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYI--DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH  314 (336)
T ss_pred             cCceEEEeccccCCCCCeehhhcChhhhhhccHhhhccc--CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence            999999999888766666766666677766554433332  234556667888999999999999875 79999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      .++++.+..| |+++.+
T Consensus       315 ~diesrktvG-kvlLlp  330 (336)
T KOG1197|consen  315 ADIESRKTVG-KVLLLP  330 (336)
T ss_pred             HHHHhhhccc-eEEEeC
Confidence            9999999999 999853

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.2e-49  Score=347.14  Aligned_cols=311  Identities=26%  Similarity=0.350  Sum_probs=276.2

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ++++++...+++|   ++++++++++|++|||+||+.++|+|++|....+|..|..  +|.++|||.+|+|++||++|++
T Consensus         2 k~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~   76 (366)
T COG1062           2 KTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTS   76 (366)
T ss_pred             CceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccc
Confidence            4688999999988   8999999999999999999999999999999999999884  9999999999999999999999


Q ss_pred             CCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEEcCC
Q 017064          127 LAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKVSK  159 (378)
Q Consensus       127 ~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~iP~  159 (378)
                      ++|||+|+..+.-                                               .++|++|.++++..++|+++
T Consensus        77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~  156 (366)
T COG1062          77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP  156 (366)
T ss_pred             cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence            9999999876641                                               35999999999999999999


Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      ..+++.++.+.|...|.+.+..+.+++++|++|.|.|. |++|++++|-|+..|+..|+.+|   .+++|+++++++|++
T Consensus       157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD---~~~~Kl~~A~~fGAT  232 (366)
T COG1062         157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD---INPEKLELAKKFGAT  232 (366)
T ss_pred             CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe---CCHHHHHHHHhcCCc
Confidence            99999999999999999999999899999999999999 99999999999999997777776   489999999999999


Q ss_pred             EEEccCcc-c-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEE
Q 017064          240 EVFTESQL-E-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       240 ~vi~~~~~-~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  315 (378)
                      +++|..+. + ++.+..++++  ++|.+|||+|+ ..+++++.+..++|+.+.+|.... ...++++..++.. .++.|+
T Consensus       233 ~~vn~~~~~~vv~~i~~~T~g--G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs  309 (366)
T COG1062         233 HFVNPKEVDDVVEAIVELTDG--GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGS  309 (366)
T ss_pred             eeecchhhhhHHHHHHHhcCC--CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEE
Confidence            99999876 3 4668888887  49999999998 556899999999999999995533 3455677777766 899999


Q ss_pred             echhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++..       ..+.++.+++++..+|++...   ++.++|+||||||++|.+++..  |-||++
T Consensus       310 ~~G~~-------~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I--R~Vi~~  366 (366)
T COG1062         310 AFGGA-------RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI--RSVIRF  366 (366)
T ss_pred             eecCC-------ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee--eEEecC
Confidence            88754       123668889999999999975   5789999999999999999887  777764

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.8e-48  Score=331.40  Aligned_cols=336  Identities=53%  Similarity=0.849  Sum_probs=302.6

Q ss_pred             cccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        41 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      ...++...|++++...++|.+++++.+.++|++...+|+||..|+.|||+|+..++|.||..+++|.+-|.|++|.|+.+
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~v   92 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAV   92 (354)
T ss_pred             ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEe
Confidence            33466677999999999999999999999999988889999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch
Q 017064          121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~  200 (378)
                      |+++.+|++||+|+......|+|++|.+.+++.++++++.+++++||++..+++|||..|.+.-++++||+|+-.||.++
T Consensus        93 Gs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~  172 (354)
T KOG0025|consen   93 GSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG  172 (354)
T ss_pred             cCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHh
Q 017064          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (378)
Q Consensus       201 ~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~  280 (378)
                      +|++.+|+||++|++-|.++|+.+..++-.+.++++||++++...+..-...++.....+++.+.+||+|+.......+.
T Consensus       173 VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~  252 (354)
T KOG0025|consen  173 VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARY  252 (354)
T ss_pred             HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHH
Confidence            99999999999999999999998888888899999999999855443223344433333458999999999999999999


Q ss_pred             cccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccc-cHHHHHHHHHHHHHHHHcCCccccc-eeeccccHH
Q 017064          281 LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSE-KATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQ  358 (378)
Q Consensus       281 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~  358 (378)
                      |..||+++.+|+++..+..++...+++|++++.|+++..|.... .++...+++.++.+|++.|+++.+. ...+|++..
T Consensus       253 L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~  332 (354)
T KOG0025|consen  253 LERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHK  332 (354)
T ss_pred             HhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhh
Confidence            99999999999999999999999999999999999999996543 3778889999999999999999885 579999999


Q ss_pred             HHHHHHHccCCC-CCceEee
Q 017064          359 TALSKALGLHGS-QPKQVIK  377 (378)
Q Consensus       359 ~a~~~~~~~~~~-g~kvvv~  377 (378)
                      .|++........ | |.+|.
T Consensus       333 tald~~L~~~~~~~-Kq~i~  351 (354)
T KOG0025|consen  333 TALDAALSKFGKSG-KQIIV  351 (354)
T ss_pred             HHHHHHHHHhccCC-ceEEE
Confidence            999877665554 4 65554

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=8.3e-47  Score=357.58  Aligned_cols=312  Identities=23%  Similarity=0.316  Sum_probs=266.6

Q ss_pred             cceEEEcccCCC-----ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           48 SKAVVYEREGPP-----DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        48 ~~a~~~~~~~~~-----~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      ||++++..++.+     .+.+++++.|.|.++++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~   78 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE   78 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence            789999987753     234899999999999999999999999999999999887543  4689999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceE
Q 017064          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~  155 (378)
                      +++++++||+|++.+.                                               ..|+|+||+.+++++++
T Consensus        79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            9999999999986321                                               02689999999999999


Q ss_pred             EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH
Q 017064          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (378)
Q Consensus       156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (378)
                      ++|+++++++|++++++++|||+++...+++++|++|||.|+ |++|++++|+||++|+ +|+++.    .+++|++.++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~----~~~~r~~~a~  233 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD----LNEDKLALAR  233 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHH
Confidence            999999999999999999999999877788999999999996 9999999999999999 577766    5788999999


Q ss_pred             hCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCce
Q 017064          235 GLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLS  311 (378)
Q Consensus       235 ~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~  311 (378)
                      ++|+++++++.+.+ .+.+++++++ + +|++|||+|. ..+..++++++++|+++.+|.... ...+++...++.++++
T Consensus       234 ~~Ga~~~i~~~~~~~~~~i~~~~~~-g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  311 (371)
T cd08281         234 ELGATATVNAGDPNAVEQVRELTGG-G-VDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT  311 (371)
T ss_pred             HcCCceEeCCCchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence            99999999987654 4667777776 4 9999999997 467889999999999999996543 2345666778889999


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +.|++...+.       ..+.++++++++++|++++.   +++|+|+|+++||+.+.+++..+ |+|+
T Consensus       312 i~g~~~~~~~-------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~-~vi~  371 (371)
T cd08281         312 LKGSYMGSCV-------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVR-QVIL  371 (371)
T ss_pred             EEEEecCCCC-------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcee-eeeC
Confidence            9998765441       12457788999999999863   56899999999999999998887 7664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.9e-46  Score=350.04  Aligned_cols=306  Identities=22%  Similarity=0.260  Sum_probs=260.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+++.    +++++++.|.++++||+|||.++|+|++|++.+.+.+......|.++|||++|+|+++|++|+++
T Consensus         1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   76 (339)
T cd08239           1 MRGAVFPGDRT----VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHF   76 (339)
T ss_pred             CeEEEEecCCc----eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccC
Confidence            68999987654    89999999999999999999999999999998877643222357899999999999999999999


Q ss_pred             CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++.+.                           ..|+|++|++++.++++++|+++++++|+++++++.|||+++
T Consensus        77 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  156 (339)
T cd08239          77 RVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL  156 (339)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            99999987541                           148899999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      .. ..+.+|++|||+|+ |++|++++|+|+++|++ |+++.    .++++.++++++|+++++++++.+.+.+.+.+++.
T Consensus       157 ~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  230 (339)
T cd08239         157 RR-VGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVD----PSPERLELAKALGADFVINSGQDDVQEIRELTSGA  230 (339)
T ss_pred             Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCC
Confidence            65 78899999999987 99999999999999999 87766    47888999999999999988765555677777765


Q ss_pred             CCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL  337 (378)
Q Consensus       260 g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (378)
                      + +|++|||+|+... ..++++++++|+++.+|.....  .++. ..++.+++++.|+...+          .+.+++++
T Consensus       231 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~  297 (339)
T cd08239         231 G-ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS----------VPDMEECA  297 (339)
T ss_pred             C-CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC----------HHHHHHHH
Confidence            5 9999999998765 7889999999999999965432  2332 45677999999986532          14578889


Q ss_pred             HHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          338 CLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       338 ~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++|.+++.   +++|+|+|+++|++++.+++ .| |+||+|
T Consensus       298 ~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~g-Kvvi~~  339 (339)
T cd08239         298 EFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SG-KVVFVF  339 (339)
T ss_pred             HHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ce-EEEEeC
Confidence            99999998753   56899999999999998875 67 999986

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.1e-46  Score=350.65  Aligned_cols=311  Identities=21%  Similarity=0.268  Sum_probs=264.8

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |||++++..++.+   +++++.|.|.++++||+|||.++|+|++|++.+.|..+.  .+|.++|||++|+|+++|+++++
T Consensus         1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~   75 (358)
T TIGR03451         1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTD   75 (358)
T ss_pred             CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcc
Confidence            6899999998876   788999999999999999999999999999998886542  46899999999999999999999


Q ss_pred             CCCCCEEeeCCC---------------------------------------CCcccccceeccCCceEEcCCCCCHhhhh
Q 017064          127 LAPGDWVIPSPP---------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (378)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa  167 (378)
                      |++||+|++.+.                                       ..|+|+||+.+++++++++|+++++++|+
T Consensus        76 ~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa  155 (358)
T TIGR03451        76 VAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG  155 (358)
T ss_pred             cCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhh
Confidence            999999986221                                       14889999999999999999999999999


Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ++++++.++|+++...+.+++|++|||+|+ |++|++++|+||++|++ |+++.    .++++.++++++|+++++++.+
T Consensus       156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~----~~~~~~~~~~~~Ga~~~i~~~~  230 (358)
T TIGR03451       156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVD----IDDRKLEWAREFGATHTVNSSG  230 (358)
T ss_pred             hhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCceEEcCCC
Confidence            999999999999887788999999999986 99999999999999996 76665    4788999999999999998876


Q ss_pred             cc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceEEEEechhhhcc
Q 017064          247 LE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSS  323 (378)
Q Consensus       247 ~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (378)
                      .+ .+.+++.+++.+ +|++|||+|+ ..+..++++++++|+++.+|..... ..++++..++.+++++.+++.....  
T Consensus       231 ~~~~~~i~~~~~~~g-~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  307 (358)
T TIGR03451       231 TDPVEAIRALTGGFG-ADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL--  307 (358)
T ss_pred             cCHHHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC--
Confidence            54 466778887666 9999999997 4678899999999999999965432 3456666778899999987543211  


Q ss_pred             ccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          324 EKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                           ..+.++++++++++|++++.   .++|||+|+++|++.+++++..  |++|.
T Consensus       308 -----~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~--k~~~~  357 (358)
T TIGR03451       308 -----PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL--RSVVE  357 (358)
T ss_pred             -----cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc--eeEEe
Confidence                 13557889999999999863   5689999999999999988764  77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=6.4e-46  Score=352.49  Aligned_cols=315  Identities=21%  Similarity=0.290  Sum_probs=263.3

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .|.+||++++..++++   +.+++++.|.++++||+|||.++|+|++|++.+.|..+....+|.++|||++|+|+++|++
T Consensus         7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~   83 (381)
T PLN02740          7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG   83 (381)
T ss_pred             cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence            4567999999987754   6788999999999999999999999999999998876433357899999999999999999


Q ss_pred             CCCCCCCCEEeeCCC--------------------------------------------------CCcccccceeccCCc
Q 017064          124 VTRLAPGDWVIPSPP--------------------------------------------------SSGTWQSYVVKDQSV  153 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~--------------------------------------------------~~G~~~~~~~~~~~~  153 (378)
                      +++|++||||++.+.                                                  ..|+|+||++++.++
T Consensus        84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~  163 (381)
T PLN02740         84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC  163 (381)
T ss_pred             CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence            999999999987531                                                  148999999999999


Q ss_pred             eEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHH
Q 017064          154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK  232 (378)
Q Consensus       154 ~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~  232 (378)
                      ++++|+++++++++.+++++.|||+++...+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .++++.+.
T Consensus       164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~----~~~~r~~~  238 (381)
T PLN02740        164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD----INPEKFEK  238 (381)
T ss_pred             eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc----CChHHHHH
Confidence            99999999999999999999999999877789999999999997 9999999999999999 577776    47889999


Q ss_pred             HHhCCCcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCC-Cccccchhhh
Q 017064          233 LKGLGADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKK-PITVSTSAFI  306 (378)
Q Consensus       233 ~~~~ga~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  306 (378)
                      ++++|++++++..+.   ..+.+++++++ + +|++||++|+ ..+..++.+++++ |+++.+|..... ...++...+ 
T Consensus       239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-  315 (381)
T PLN02740        239 GKEMGITDFINPKDSDKPVHERIREMTGG-G-VDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-  315 (381)
T ss_pred             HHHcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-
Confidence            999999999987653   34567777776 5 9999999997 4678999999997 999999965432 122333333 


Q ss_pred             hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+++++.|+....+.       ....++++++++.+|.+++.   +++|+|+|+++|++.+.+++. . |++|+.
T Consensus       316 ~~~~~i~g~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~-k~~~~~  381 (381)
T PLN02740        316 FDGRSITGSVFGDFK-------GKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-L-RCLLHL  381 (381)
T ss_pred             hcCCeEEEEecCCCC-------cHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-e-eEEEeC
Confidence            378899988765431       12457889999999998763   568999999999999988765 3 999863

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=7.4e-46  Score=349.12  Aligned_cols=310  Identities=19%  Similarity=0.277  Sum_probs=256.9

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .|.++.++......+.   ++..+++.|.++++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus         9 ~~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~   84 (360)
T PLN02586          9 HPQKAFGWAARDPSGV---LSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKN   84 (360)
T ss_pred             chhheeEEEecCCCCC---ceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCC
Confidence            4555666666554442   778888999999999999999999999999998876542 256899999999999999999


Q ss_pred             CCCCCCCCEEeeCCC----------------------------------CCcccccceeccCCceEEcCCCCCHhhhhhc
Q 017064          124 VTRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATI  169 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~  169 (378)
                      |++|++||+|+..+.                                  .+|+|+||++++++.++++|+++++++++++
T Consensus        85 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l  164 (360)
T PLN02586         85 VKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPL  164 (360)
T ss_pred             CCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhh
Confidence            999999999974210                                  1489999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH
Q 017064          170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV  249 (378)
Q Consensus       170 ~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~  249 (378)
                      ++++.|+|+++.....+++|++|||.|+ |++|++++|+||++|++|++++..   .+++.+.++++|++++++..+.  
T Consensus       165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~---~~~~~~~~~~~Ga~~vi~~~~~--  238 (360)
T PLN02586        165 LCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS---SNKEDEAINRLGADSFLVSTDP--  238 (360)
T ss_pred             hcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---cchhhhHHHhCCCcEEEcCCCH--
Confidence            9999999999977667789999999887 999999999999999998887632   3344556688999999986653  


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHH
Q 017064          250 KNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE  328 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (378)
                      +.+++.++   ++|++||++|.. .++.++++++++|+++.+|... .+..++...++.++..+.++..++         
T Consensus       239 ~~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~---------  305 (360)
T PLN02586        239 EKMKAAIG---TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIGG---------  305 (360)
T ss_pred             HHHHhhcC---CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcCC---------
Confidence            34555543   399999999974 5788999999999999998543 345566677777888888876432         


Q ss_pred             HHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          329 CRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       329 ~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       .+.++++++++++|++++.+++|+|+|+++||+.+.+++..| |+|+++
T Consensus       306 -~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~~~~~~~g-kvvi~~  353 (360)
T PLN02586        306 -IKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRY-RFVIDV  353 (360)
T ss_pred             -HHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHHHcCCCcE-EEEEEc
Confidence             145788999999999998778899999999999999999888 999874

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2e-45  Score=342.27  Aligned_cols=317  Identities=30%  Similarity=0.452  Sum_probs=266.1

Q ss_pred             cceEEEcccCCCc--cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++++..++++.  +.+++.+.|.|.++++||+||+.++|+|++|+..+.|.++....+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            6899998887652  22788899999999999999999999999999999887654445789999999999999999999


Q ss_pred             C-CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe-CCCchHHH
Q 017064          126 R-LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQ  203 (378)
Q Consensus       126 ~-~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~-g~~g~~G~  203 (378)
                      + |++||+|++....+|+|++|+++++++++++|+++++++++++++.++|||..+ ....+ ++++++|+ |++|++|+
T Consensus        81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~  158 (324)
T cd08291          81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR  158 (324)
T ss_pred             ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence            6 999999998754348999999999999999999999999999999999997554 44555 55666666 78899999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      +++|+|+++|+++++++    .++++.+.++++|++++++++..+ .+.+++.+++.+ +|++||++|+......+++++
T Consensus       159 ~a~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~-~d~vid~~g~~~~~~~~~~l~  233 (324)
T cd08291         159 MLVRLCKADGIKVINIV----RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLN-ATIFFDAVGGGLTGQILLAMP  233 (324)
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHhhC
Confidence            99999999999998887    578899999999999999887654 467888887766 999999999988888999999


Q ss_pred             cCCEEEEEecCCCCCc-cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHH
Q 017064          283 QGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA  360 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a  360 (378)
                      ++|+++.+|.....+. .++...++.+++++.+++...+...    ...+.+++++++++ +.+++.+ ++|+|+|+++|
T Consensus       234 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a  308 (324)
T cd08291         234 YGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQK----LGPEVVKKLKKLVK-TELKTTFASRYPLALTLEA  308 (324)
T ss_pred             CCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcc----cCHHHHHHHHHHHh-CccccceeeEEcHHHHHHH
Confidence            9999999996544433 2555667789999999987655221    12456778888888 8888765 58999999999


Q ss_pred             HHHHHccCCCCCceEee
Q 017064          361 LSKALGLHGSQPKQVIK  377 (378)
Q Consensus       361 ~~~~~~~~~~g~kvvv~  377 (378)
                      ++.+.+++..| |++|+
T Consensus       309 ~~~~~~~~~~G-kvv~~  324 (324)
T cd08291         309 IAFYSKNMSTG-KKLLI  324 (324)
T ss_pred             HHHHHhCCCCC-eEEeC
Confidence            99999999999 99974

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.3e-45  Score=344.98  Aligned_cols=307  Identities=21%  Similarity=0.312  Sum_probs=254.1

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      +++.+...+.+.. +...+++.|.++++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         6 ~a~~~~~~~~~~~-l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          6 KAFGWAANDESGV-LSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             eeEEEEEccCCCC-ceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccC
Confidence            3433333333322 777888889999999999999999999999999887532 24688999999999999999999999


Q ss_pred             CCCEEeeCCC----------------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064          129 PGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       129 ~Gd~V~~~~~----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      +||+|+..+.                                  ..|+|+||+.++++.++++|++++++++++++++..
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence            9999974210                                  148999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064          175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (378)
Q Consensus       175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~  253 (378)
                      |+|+++..... .++|++|+|.|+ |++|++++|+||++|++|+++++.   .+++.+.++++|+++++++.+.  +.+.
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~---~~~~~~~a~~lGa~~~i~~~~~--~~v~  237 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS---SEKEREAIDRLGADSFLVTTDS--QKMK  237 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC---hHHhHHHHHhCCCcEEEcCcCH--HHHH
Confidence            99999876433 368999999987 999999999999999998888732   3445778889999999986642  3555


Q ss_pred             HHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064          254 GLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM  332 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (378)
                      +.++  + +|++|||+|.+ .+..++++++++|+++.+|... .+..++...++.+++++.|+....          .+.
T Consensus       238 ~~~~--~-~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~----------~~~  303 (375)
T PLN02178        238 EAVG--T-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG----------MKE  303 (375)
T ss_pred             HhhC--C-CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC----------HHH
Confidence            5553  3 99999999986 5689999999999999999643 345567777888999999986542          145


Q ss_pred             HHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          333 IDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       333 ~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++++++|++++.+++|||+|+++|++.+.+++..| |+|+++
T Consensus       304 ~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~g-kvvi~~  348 (375)
T PLN02178        304 TQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRY-RFVIDV  348 (375)
T ss_pred             HHHHHHHHHhCCCcccEEEEeHHHHHHHHHHHHcCCCce-EEEEEe
Confidence            788999999999998888899999999999999999888 999874

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.8e-45  Score=345.07  Aligned_cols=310  Identities=22%  Similarity=0.272  Sum_probs=259.8

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .+||++++.++++.   ++++++|.|.++++||+|||.++|+|++|++.+.+..    .+|.++|||++|+|+++|++++
T Consensus        11 ~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~   83 (378)
T PLN02827         11 ITCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVT   83 (378)
T ss_pred             ceeEEEEEecCCCC---ceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCc
Confidence            45899999876643   7889999999999999999999999999999887642    3578999999999999999999


Q ss_pred             CCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcC
Q 017064          126 RLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVS  158 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP  158 (378)
                      +|++||+|++.+.                                               ..|+|+||+.++++.++++|
T Consensus        84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP  163 (378)
T PLN02827         84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD  163 (378)
T ss_pred             ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence            9999999997532                                               12799999999999999999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      +++++++++.+++++.++|+++.+.+++++|++|||+|+ |++|++++|+|+++|++++++++   .++++.++++++|+
T Consensus       164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~---~~~~~~~~a~~lGa  239 (378)
T PLN02827        164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD---INPEKAEKAKTFGV  239 (378)
T ss_pred             CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC---CCHHHHHHHHHcCC
Confidence            999999999999888899988877788999999999997 99999999999999996444442   37889999999999


Q ss_pred             cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCCCCccccc-hhhhhcCceE
Q 017064          239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSKKPITVST-SAFIFKDLSL  312 (378)
Q Consensus       239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~  312 (378)
                      ++++++++.   ..+.+++++++ + +|++||++|.+ .+..+++.++++ |+++.+|.... ...+.. ..++.+++++
T Consensus       240 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~~~~~~~~~~~~~~i  316 (378)
T PLN02827        240 TDFINPNDLSEPIQQVIKRMTGG-G-ADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPEVSAHYGLFLSGRTL  316 (378)
T ss_pred             cEEEcccccchHHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-CccccccHHHHhcCceE
Confidence            999987652   33557777766 4 99999999985 578999999998 99999996543 233333 3567799999


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .|+....+.       ....++++++++++|++++  . +++|+|+|+++|++.+.+++. + |+||.+
T Consensus       317 ~g~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~-k~vi~~  376 (378)
T PLN02827        317 KGSLFGGWK-------PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-L-RCVIHM  376 (378)
T ss_pred             EeeecCCCc-------hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-e-EEEEEe
Confidence            998765431       1245778899999999997  3 568999999999999998876 5 999875

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2.5e-44  Score=334.84  Aligned_cols=322  Identities=30%  Similarity=0.518  Sum_probs=277.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+++++.+++++.++|.|.+.++||+|||.++++|++|+..+.|.++..+..|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            68999988776544488999999999999999999999999999999888765433468899999999999999999999


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~  207 (378)
                      ++||+|++... .|+|++|++++.+.++++|+++++++++++++.+++||+++.. +++.+|++|||+|++|.+|++++|
T Consensus        81 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~  158 (324)
T cd08292          81 QVGQRVAVAPV-HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAM  158 (324)
T ss_pred             CCCCEEEeccC-CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHH
Confidence            99999999863 4899999999999999999999999999999999999999855 899999999999999999999999


Q ss_pred             HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT  286 (378)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~  286 (378)
                      +|+++|+++++++    .++++.+.++++|+++++++++.+ ...+++.+++++ +|++|||+|+.....++++++++|+
T Consensus       159 ~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~~g~~~~~~~~~~l~~~g~  233 (324)
T cd08292         159 LAAARGINVINLV----RRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAP-ISVALDSVGGKLAGELLSLLGEGGT  233 (324)
T ss_pred             HHHHCCCeEEEEe----cCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHhhcCCcE
Confidence            9999999999998    467777888889999999887653 466888888877 9999999999888999999999999


Q ss_pred             EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064          287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL  365 (378)
Q Consensus       287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~  365 (378)
                      ++.+|.......++++...+.+++++.++....+.....+....+.++++++++.+|.+++. .+.|+++++++|++.+.
T Consensus       234 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~  313 (324)
T cd08292         234 LVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASM  313 (324)
T ss_pred             EEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHH
Confidence            99998653333445555567799999999876653333255567789999999999999854 56899999999999999


Q ss_pred             ccCCCCCceEee
Q 017064          366 GLHGSQPKQVIK  377 (378)
Q Consensus       366 ~~~~~g~kvvv~  377 (378)
                      ++...+ |+|++
T Consensus       314 ~~~~~~-kvvv~  324 (324)
T cd08292         314 RPGRAG-KVLLR  324 (324)
T ss_pred             cCCCCc-eEEeC
Confidence            888888 99874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-45  Score=341.07  Aligned_cols=303  Identities=19%  Similarity=0.198  Sum_probs=250.3

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhc-ccCCC-CCCCCccCCCceeEEEEEecCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ..++++++..++.    +++++.+.| ++++||+|||.++|||++|++.+. |..+. ..++|.++|||++|+|+++  +
T Consensus         3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~   75 (343)
T PRK09880          3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--D   75 (343)
T ss_pred             ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--c
Confidence            3568999987776    889999987 689999999999999999999875 43322 1257899999999999999  7


Q ss_pred             CCCCCCCCEEeeCC-------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhcccc
Q 017064          124 VTRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (378)
Q Consensus       124 v~~~~~Gd~V~~~~-------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~  172 (378)
                      +++|++||+|+..+                               ...|+|+||++++++.++++|+++++++++. ..+
T Consensus        76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~  154 (343)
T PRK09880         76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEP  154 (343)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcH
Confidence            88999999998532                               1258999999999999999999999987664 346


Q ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH
Q 017064          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN  251 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~  251 (378)
                      +.+||+++.+ ....+|++|+|+|+ |++|++++|+|+++|++ |+++.    .+++++++++++|+++++++++.+..+
T Consensus       155 ~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~  228 (343)
T PRK09880        155 LAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCAD----VSPRSLSLAREMGADKLVNPQNDDLDH  228 (343)
T ss_pred             HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEe----CCHHHHHHHHHcCCcEEecCCcccHHH
Confidence            7899999976 56678999999997 99999999999999995 66665    478999999999999999987765544


Q ss_pred             HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064          252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      +.+..   +++|++|||+|.+ .++.++++++++|+++.+|... ...++++..++.+++++.++...           .
T Consensus       229 ~~~~~---g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~-----------~  293 (343)
T PRK09880        229 YKAEK---GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF-----------T  293 (343)
T ss_pred             HhccC---CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec-----------c
Confidence            33322   2499999999985 5689999999999999999543 33456777788899999987531           2


Q ss_pred             HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          331 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.++++++++++|++++.   +++|+|+|+++|++.+.+++..| |+++++
T Consensus       294 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~  343 (343)
T PRK09880        294 EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAA-KVQLVF  343 (343)
T ss_pred             ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCce-EEEEeC
Confidence            457889999999999863   46899999999999999888888 999975

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2e-44  Score=340.66  Aligned_cols=310  Identities=21%  Similarity=0.294  Sum_probs=255.6

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++.+..++..   ++++++|.|.++++||+|||.++|+|++|++.+.|.++. .++|.++|||++|+|+++|+++++|
T Consensus         2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~   77 (368)
T TIGR02818         2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSV   77 (368)
T ss_pred             ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccC
Confidence            788888877654   788999999999999999999999999999999887653 2578999999999999999999999


Q ss_pred             CCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCCC
Q 017064          128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD  160 (378)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~  160 (378)
                      ++||||++.+.                                               ..|+|+||+++|.++++++|++
T Consensus        78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~  157 (368)
T TIGR02818        78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA  157 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence            99999987531                                               0268999999999999999999


Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      +++++++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .++++++.++++|++
T Consensus       158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~----~~~~~~~~a~~~Ga~  232 (368)
T TIGR02818       158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID----INPAKFELAKKLGAT  232 (368)
T ss_pred             CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCC
Confidence            9999999999999999999987789999999999987 9999999999999999 677776    478899999999999


Q ss_pred             EEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCceEE
Q 017064          240 EVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSLK  313 (378)
Q Consensus       240 ~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~  313 (378)
                      ++++..+  . ..+.+++++++ + +|++|||+|++ .+..++++++++ |+++.+|.... .+..+....++ ++..+.
T Consensus       233 ~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~  309 (368)
T TIGR02818       233 DCVNPNDYDKPIQEVIVEITDG-G-VDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWR  309 (368)
T ss_pred             eEEcccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEE
Confidence            9998764  2 23557777776 4 99999999974 568899999886 99999996532 22333344443 344566


Q ss_pred             EEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          314 GFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++....+       .....++++++++++|++++.   +++|+|+|+++|++.+.+++. . |++|++
T Consensus       310 g~~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~-k~~v~~  368 (368)
T TIGR02818       310 GSAFGGV-------KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-I-RTVIHY  368 (368)
T ss_pred             EeeccCC-------CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-e-eEEeeC
Confidence            6643321       012457889999999998753   578999999999999987754 4 999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.4e-44  Score=334.90  Aligned_cols=298  Identities=18%  Similarity=0.182  Sum_probs=250.6

Q ss_pred             EEEcccCCCc-cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCC
Q 017064           51 VVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAP  129 (378)
Q Consensus        51 ~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  129 (378)
                      +.+..++.+. ..+++++.|.|.++++||+|||.++|+|++|.+.+.|.++.. ..|.++|||++|+|+++|+++++|++
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCC
Confidence            4455555542 348899999999999999999999999999999998876532 34789999999999999999999999


Q ss_pred             CCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH
Q 017064          130 GDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED  182 (378)
Q Consensus       130 Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~  182 (378)
                      ||+|+..+                           ..+|+|+||+.++++.++++|+++++++++.+++++.|||+++..
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~  160 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR  160 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence            99997421                           014899999999999999999999999999999999999999965


Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                       +++++|++|||+|+ |++|++++|+|+++|++|++++    .+++|+++++++|++++++..+..         .. ++
T Consensus       161 -~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~----~~~~~~~~a~~~Ga~~vi~~~~~~---------~~-~~  224 (329)
T TIGR02822       161 -ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMT----RGAAARRLALALGAASAGGAYDTP---------PE-PL  224 (329)
T ss_pred             -cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHhCCceeccccccC---------cc-cc
Confidence             88999999999998 9999999999999999988887    478899999999999998754321         11 38


Q ss_pred             cEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064          263 ALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR  341 (378)
Q Consensus       263 Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (378)
                      |+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++....          ...+.+++++++
T Consensus       225 d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~l~~  294 (329)
T TIGR02822       225 DAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT----------RADAREFLELAA  294 (329)
T ss_pred             eEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC----------HHHHHHHHHHHH
Confidence            999988875 456889999999999999996433333455666777899998875421          234677889999


Q ss_pred             cCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          342 EGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       342 ~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +|++++.+++|+|+|+++|++.+.+++..| |+||
T Consensus       295 ~g~i~~i~~~~~l~~~~~A~~~~~~~~~~G-kvvl  328 (329)
T TIGR02822       295 QHGVRVTTHTYPLSEADRALRDLKAGRFDG-AAVL  328 (329)
T ss_pred             hCCCeeEEEEEeHHHHHHHHHHHHcCCCce-EEEe
Confidence            999987778899999999999999999999 9987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=4.5e-44  Score=338.85  Aligned_cols=309  Identities=21%  Similarity=0.302  Sum_probs=259.2

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++..++.+   +++++++.|+++++||+|||.++|+|++|++.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   77 (369)
T cd08301           2 TCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTD   77 (369)
T ss_pred             ccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCc
Confidence            6899999887664   788999999999999999999999999999999887652 357899999999999999999999


Q ss_pred             CCCCCEEeeCCC------------------------------------------------CCcccccceeccCCceEEcC
Q 017064          127 LAPGDWVIPSPP------------------------------------------------SSGTWQSYVVKDQSVWHKVS  158 (378)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------------------------~~G~~~~~~~~~~~~~~~iP  158 (378)
                      |++||+|++.+.                                                ..|+|+||+++++.+++++|
T Consensus        78 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  157 (369)
T cd08301          78 LKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKIN  157 (369)
T ss_pred             cccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECC
Confidence            999999987521                                                12789999999999999999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCC
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      +++++++++++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++.+.++++|
T Consensus       158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~----~~~~~~~~~~~~G  232 (369)
T cd08301         158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVD----LNPSKFEQAKKFG  232 (369)
T ss_pred             CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcC
Confidence            999999999999999999999888789999999999987 9999999999999999 688777    4788999999999


Q ss_pred             CcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCce
Q 017064          238 ADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLS  311 (378)
Q Consensus       238 a~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~  311 (378)
                      ++.+++..+.   ..+.+++++++ + +|++|||+|.. ....++++++++ |+++.+|.... ...+++...++ ++++
T Consensus       233 a~~~i~~~~~~~~~~~~v~~~~~~-~-~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~  309 (369)
T cd08301         233 VTEFVNPKDHDKPVQEVIAEMTGG-G-VDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRT  309 (369)
T ss_pred             CceEEcccccchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCe
Confidence            9999987652   23456677765 4 99999999975 468899999996 99999996543 23334433344 7899


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +.|+....+.       ....++++++++.+|.+++.   +++|+|+|+++|++.+.+++. . |++|
T Consensus       310 i~g~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-k~~~  368 (369)
T cd08301         310 LKGTLFGGYK-------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-L-RCIL  368 (369)
T ss_pred             EEEEecCCCC-------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-e-eEEe
Confidence            9998765441       22457889999999988763   568999999999999998875 3 8887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=5.5e-44  Score=337.92  Aligned_cols=310  Identities=24%  Similarity=0.343  Sum_probs=256.2

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++...+.+   +++++.|.|.++++||+|||.++|+|++|.+.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus         2 ~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~   77 (368)
T cd08300           2 TCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTS   77 (368)
T ss_pred             cceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCcc
Confidence            5788888777654   7889999999999999999999999999999998876542 57899999999999999999999


Q ss_pred             CCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCC
Q 017064          127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK  159 (378)
Q Consensus       127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~  159 (378)
                      |++||+|++.+.                                               ..|+|+||+.++++.++++|+
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  157 (368)
T cd08300          78 VKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINP  157 (368)
T ss_pred             CCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCC
Confidence            999999987521                                               126899999999999999999


Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCC
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      ++++++++++++++.|||+++...+.+++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++.+.++++|+
T Consensus       158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~----~~~~~~~~~~~lGa  232 (368)
T cd08300         158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID----INPDKFELAKKFGA  232 (368)
T ss_pred             CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCC
Confidence            99999999999999999999877788999999999986 9999999999999999 577776    47889999999999


Q ss_pred             cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCceE
Q 017064          239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSL  312 (378)
Q Consensus       239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~  312 (378)
                      ++++++++.   ..+.+++++++ + +|+||||+|+ ..+..++++++++ |+++.+|.... .+..++...+. ++..+
T Consensus       233 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~  309 (368)
T cd08300         233 TDCVNPKDHDKPIQQVLVEMTDG-G-VDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVW  309 (368)
T ss_pred             CEEEcccccchHHHHHHHHHhCC-C-CcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeE
Confidence            999988753   34567777776 4 9999999997 4678899999886 99999996532 22333333333 34566


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++....|.       ..+.++++++++++|++++.   +++|+|+|+++|++.+.+++. . |++|+
T Consensus       310 ~g~~~~~~~-------~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~-k~~~~  368 (368)
T cd08300         310 KGTAFGGWK-------SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-I-RTVVK  368 (368)
T ss_pred             EEEEecccC-------cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-c-eeeeC
Confidence            666554331       13457788999999999863   478999999999999987764 4 99875

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8.8e-44  Score=334.96  Aligned_cols=307  Identities=22%  Similarity=0.278  Sum_probs=259.1

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ..++++++..++++   ++.++++.|.++++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         8 ~~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~   83 (357)
T PLN02514          8 KKTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_pred             ceEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCcc
Confidence            34799999998875   788999999999999999999999999999998886543 24688999999999999999999


Q ss_pred             CCCCCCEEeeCC----------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccc
Q 017064          126 RLAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIV  171 (378)
Q Consensus       126 ~~~~Gd~V~~~~----------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~  171 (378)
                      +|++||+|+..+                                  ...|+|+||++++.+.++++|+++++++++++++
T Consensus        84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (357)
T PLN02514         84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC  163 (357)
T ss_pred             cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence            999999997421                                  0148999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHH
Q 017064          172 NPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVK  250 (378)
Q Consensus       172 ~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~  250 (378)
                      ++.|||+++......++|++|+|+|+ |++|++++|+||++|++++++++    +++++. .++++|+++++++.+.  .
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~----~~~~~~~~~~~~Ga~~~i~~~~~--~  236 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISS----SDKKREEALEHLGADDYLVSSDA--A  236 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHhcCCcEEecCCCh--H
Confidence            99999999987666789999999976 99999999999999999888873    455554 4467999988876542  3


Q ss_pred             HHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064          251 NVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC  329 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (378)
                      .+.+.+.   ++|++|||+|. ..+..++++++++|+++.+|.... ..+++...++.+++++.|+.....         
T Consensus       237 ~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---------  303 (357)
T PLN02514        237 EMQEAAD---SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSM---------  303 (357)
T ss_pred             HHHHhcC---CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCH---------
Confidence            4555443   39999999996 467889999999999999996543 345666778889999999865422         


Q ss_pred             HHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          330 RNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       330 ~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       ..++++++++.+|.+++.+++|+|+|+.+|++.+++++..| |+|+++
T Consensus       304 -~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~g-k~v~~~  350 (357)
T PLN02514        304 -KETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRY-RFVVDV  350 (357)
T ss_pred             -HHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHHHcCCCce-eEEEEc
Confidence             45788999999999988788899999999999999999888 999874

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-44  Score=311.41  Aligned_cols=314  Identities=23%  Similarity=0.291  Sum_probs=272.3

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +.++|+++...++.|   +.++|+..++|+..||+||+.++++|++|...+.|..+.. .+|.++|||.+|+|+++|.+|
T Consensus         5 vI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~-~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    5 VITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG-LFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             ceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc-cCceEecccceeEEEEecCCc
Confidence            457899999999998   8899999999999999999999999999999999987543 689999999999999999999


Q ss_pred             CCCCCCCEEeeCCCC------------------------------------------------CcccccceeccCCceEE
Q 017064          125 TRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~~------------------------------------------------~G~~~~~~~~~~~~~~~  156 (378)
                      +++++||+|+.....                                                ..+|+||.+++...++|
T Consensus        81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence            999999999965531                                                34899999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL  236 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~  236 (378)
                      |++..+++.++.+.+...|.|.+..+.++++||+++.|+|. |++|+++++-||+.||..|+-+|   -+++|.+.++++
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvD---iN~~Kf~~ak~f  236 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVD---INPDKFEKAKEF  236 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEe---cCHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999 99999999999999996565555   489999999999


Q ss_pred             CCcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCC-CCCccccchhhhhcCc
Q 017064          237 GADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMS-KKPITVSTSAFIFKDL  310 (378)
Q Consensus       237 ga~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~  310 (378)
                      |+++.+|+.+.   -.+.+.++|++  ++|.-|||+|+ +.+++++.+...| |+-|.+|... ....++.++.++ .+.
T Consensus       237 GaTe~iNp~d~~~~i~evi~EmTdg--GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR  313 (375)
T KOG0022|consen  237 GATEFINPKDLKKPIQEVIIEMTDG--GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGR  313 (375)
T ss_pred             CcceecChhhccccHHHHHHHHhcC--CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-ccc
Confidence            99999998843   23568888886  69999999998 5568999999998 9999999553 334566666665 588


Q ss_pred             eEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          311 SLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.|+.++.|       ..+..+..+.+...++.++..   ++++||+++++||++|.+++..  |.|+.+
T Consensus       314 ~~~Gs~FGG~-------K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi--R~vl~~  375 (375)
T KOG0022|consen  314 TWKGSAFGGF-------KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI--RCVLWM  375 (375)
T ss_pred             EEEEEecccc-------cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE--EEEEeC
Confidence            8999988876       233556777777888888864   6899999999999999998876  777754

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.9e-43  Score=332.68  Aligned_cols=309  Identities=25%  Similarity=0.344  Sum_probs=257.6

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++...+++   ++++++|.|.++++||+|||.++|+|++|++.+.|..+  ..+|.++|||++|+|+++|+++++
T Consensus         2 ~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~   76 (365)
T cd08277           2 KCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTN   76 (365)
T ss_pred             ccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCcc
Confidence            5789988877654   78899999999999999999999999999999988655  357899999999999999999999


Q ss_pred             CCCCCEEeeCCC----------------------------------------------CCcccccceeccCCceEEcCCC
Q 017064          127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD  160 (378)
Q Consensus       127 ~~~Gd~V~~~~~----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~  160 (378)
                      +++||+|++.+.                                              ..|+|+||++++.+.++++|++
T Consensus        77 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~  156 (365)
T cd08277          77 LKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPA  156 (365)
T ss_pred             CCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCC
Confidence            999999987521                                              1378999999999999999999


Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      +++++++++++++.|||+++...+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++.+.++++|++
T Consensus       157 l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~~~~~ga~  231 (365)
T cd08277         157 APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD----INEDKFEKAKEFGAT  231 (365)
T ss_pred             CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCC
Confidence            9999999999999999999877789999999999986 9999999999999999 577776    478899999999999


Q ss_pred             EEEccCccc---HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCCCccccchhhhhcCceEEE
Q 017064          240 EVFTESQLE---VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKKPITVSTSAFIFKDLSLKG  314 (378)
Q Consensus       240 ~vi~~~~~~---~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  314 (378)
                      ++++..+..   .+.++++++ .+ +|++|||+|. ..+..++++++++ |+++.+|.......++++..++. ++++.|
T Consensus       232 ~~i~~~~~~~~~~~~~~~~~~-~g-~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g  308 (365)
T cd08277         232 DFINPKDSDKPVSEVIREMTG-GG-VDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKG  308 (365)
T ss_pred             cEeccccccchHHHHHHHHhC-CC-CCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEe
Confidence            999876532   455777766 34 9999999996 4558899999885 99999996543334455555553 888988


Q ss_pred             EechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      ++.+.+.       ....++++++++.++.++..   +++|+|+|+++|++.+.+++ .. |+++.
T Consensus       309 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-k~~i~  365 (365)
T cd08277         309 SFFGGFK-------SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CI-RTVIT  365 (365)
T ss_pred             eecCCCC-------hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-Cc-eEeeC
Confidence            8765441       12356788899999987643   56899999999999998877 44 98873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=9e-43  Score=326.67  Aligned_cols=313  Identities=21%  Similarity=0.269  Sum_probs=253.2

Q ss_pred             cceEEEcccC----CCccceEEeee---CCC-CCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCC--ceeEEE
Q 017064           48 SKAVVYEREG----PPDSVIKMIEL---PPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY--EGVGEV  117 (378)
Q Consensus        48 ~~a~~~~~~~----~~~~~~~~~~~---~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V  117 (378)
                      +|+|++...-    .++. |++.+.   +.| ++++|||+|||.++++|+.|+..+.+..+ ....|+++|+  |++|+|
T Consensus         9 ~~~~~~~~~~~~~~~~~~-f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v   86 (348)
T PLN03154          9 NKQVILKNYIDGIPKETD-MEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVS   86 (348)
T ss_pred             ceEEEEecCCCCCCCccc-EEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEE
Confidence            4666663321    1223 777773   555 45899999999999999999875443222 1235889998  889999


Q ss_pred             EEecCCCCCCCCCCEEeeCCCCCcccccceeccCC--ceEE--cCCCCCHh-hhhhccccHHHHHHHHHHHhccCCCCEE
Q 017064          118 YSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQS--VWHK--VSKDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSI  192 (378)
Q Consensus       118 ~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~--~~~~--iP~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~V  192 (378)
                      ..+|+++++|++||+|++.    |+|+||++++.+  ++++  +|++++++ ++++++++++|||+++.+.+++++|++|
T Consensus        87 ~~vg~~v~~~~~Gd~V~~~----~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V  162 (348)
T PLN03154         87 KVVDSDDPNFKPGDLISGI----TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV  162 (348)
T ss_pred             EEEecCCCCCCCCCEEEec----CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence            9999999999999999865    689999999875  3544  49999986 7889999999999999888899999999


Q ss_pred             EEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc-c-HHHHHHHhcCCCCCcEEEeCC
Q 017064          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL-E-VKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       193 lV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~-~-~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      ||+|++|++|++++|+||++|++|++++    .++++.+.++ ++|+++++++++. + .+.+++.+++ | +|++|||+
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~----~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~-g-vD~v~d~v  236 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSA----GSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE-G-IDIYFDNV  236 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC-C-cEEEEECC
Confidence            9999999999999999999999998887    5788888887 7999999998742 3 3556666653 4 99999999


Q ss_pred             CCccHHHHHHhcccCCEEEEEecCCCCCcc-----ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          270 GGNSASKVLKFLSQGGTMVTYGGMSKKPIT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       270 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      |+..+..++++++++|+++.+|.....+..     .+...++.+++++.|+....+     .....+.++++++++++|+
T Consensus       237 G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~-----~~~~~~~~~~~~~l~~~G~  311 (348)
T PLN03154        237 GGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDY-----LHLFPQFLENVSRYYKQGK  311 (348)
T ss_pred             CHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHH-----HHHHHHHHHHHHHHHHCCC
Confidence            998889999999999999999965433221     244567789999999876543     1223467889999999999


Q ss_pred             ccccce-eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          345 LKYDME-LVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       345 ~~~~~~-~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++.++ .|+|+++++|++.+++++..| |+||++
T Consensus       312 l~~~~~~~~~L~~~~~A~~~l~~g~~~G-KvVl~~  345 (348)
T PLN03154        312 IVYIEDMSEGLESAPAALVGLFSGKNVG-KQVIRV  345 (348)
T ss_pred             ccCceecccCHHHHHHHHHHHHcCCCCc-eEEEEe
Confidence            998765 799999999999999999999 999974

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2e-42  Score=324.38  Aligned_cols=328  Identities=51%  Similarity=0.834  Sum_probs=276.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCC-CcEEEEEEeeccChhhhhhhcccCCCCCC----CCccCCCceeEEEEEecC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK----VPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~  122 (378)
                      ||++++..++.+.+.+.+++.|.|++.+ ++|+||+.++|+|++|...+.|..+....    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            7999999888765448899999998887 99999999999999999998887653322    577899999999999999


Q ss_pred             CCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G  202 (378)
                      ++..+++||+|++.....|+|++|++++.+.++++|+++++++++++++.++|||+++.....+++|++|||+|++|++|
T Consensus        81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg  160 (341)
T cd08290          81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG  160 (341)
T ss_pred             CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence            99999999999987644589999999999999999999999999999999999999998878899999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPALGFNCVGGNSASKVL  278 (378)
Q Consensus       203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~  278 (378)
                      ++++|+|++.|++++++++.....+++.+.++++|++++++++..    ....+++..++ + +|++|||+|+..+...+
T Consensus       161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~-~d~vld~~g~~~~~~~~  238 (341)
T cd08290         161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-R-PKLALNCVGGKSATELA  238 (341)
T ss_pred             HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-C-ceEEEECcCcHhHHHHH
Confidence            999999999999999998542111267788889999999988763    34556777666 4 99999999998888899


Q ss_pred             HhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceee---cc
Q 017064          279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELV---PF  354 (378)
Q Consensus       279 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~---~l  354 (378)
                      ++++++|+++.+|........++....+.+++++.+.....+....++......++++++++.+|.+++. ...|   ++
T Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  318 (341)
T cd08290         239 RLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPL  318 (341)
T ss_pred             HHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCH
Confidence            9999999999998544333445555667899999998876542212355666788999999999999875 3457   99


Q ss_pred             ccHHHHHHHHHccCCCCCceEeeC
Q 017064          355 NNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       355 ~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++++.+.+++..+ |+|+++
T Consensus       319 ~~~~~a~~~~~~~~~~~-k~v~~~  341 (341)
T cd08290         319 EEFKDALANALKGGGGG-KQVLVM  341 (341)
T ss_pred             HHHHHHHHHHhhcCCCC-eEEEeC
Confidence            99999999999999888 999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-43  Score=327.64  Aligned_cols=310  Identities=24%  Similarity=0.287  Sum_probs=252.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..++.    +++.+.|.|.+ +++||+|||.++|+|++|...+.....  ...|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~   74 (347)
T PRK10309          1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDD   74 (347)
T ss_pred             CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCC
Confidence            68999987664    88999999987 599999999999999999875432111  135789999999999999999999


Q ss_pred             CCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       127 ~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      |++||+|++.+.                          ..|+|++|+.++++.++++|+++++++++.+. ...++|+++
T Consensus        75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~  153 (347)
T PRK10309         75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF  153 (347)
T ss_pred             CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence            999999997641                          14899999999999999999999999999874 355678876


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcE-EEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS-INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~v-i~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                       ....+.+|++|||+|+ |++|++++|+|+++|+++ +++.    .++++.+.++++|++++++.++.+.+++.+.+.+.
T Consensus       154 -~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~  227 (347)
T PRK10309        154 -HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID----INSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL  227 (347)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence             4478899999999986 999999999999999984 5554    47888999999999999988765556677777765


Q ss_pred             CCCc-EEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCcccc---chhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064          260 PEPA-LGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMID  334 (378)
Q Consensus       260 g~~D-vvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (378)
                      + +| ++|||+|++ .+..++++++++|+++.+|.... +.+++   ...++.+++++.|++.... ..    ...+.++
T Consensus       228 ~-~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~----~~~~~~~  300 (347)
T PRK10309        228 R-FDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYS-SP----WPGQEWE  300 (347)
T ss_pred             C-CCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEecccc-CC----cchhHHH
Confidence            5 88 999999985 66899999999999999996543 22232   2356779999999865321 00    0124577


Q ss_pred             HHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          335 YLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       335 ~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++++|.+++  . +++|+|+|+++|++.+.+++..| |+|+++
T Consensus       301 ~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  346 (347)
T PRK10309        301 TASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPG-KVLLQI  346 (347)
T ss_pred             HHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcce-EEEEeC
Confidence            8899999999864  2 56799999999999999998888 999875

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=6.1e-43  Score=331.88  Aligned_cols=308  Identities=16%  Similarity=0.142  Sum_probs=242.6

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCC-------CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEE
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVK-------ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS  119 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~  119 (378)
                      -||++++..+++    ++++++|.|.++       +|||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|++
T Consensus         2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~   75 (393)
T TIGR02819         2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIE   75 (393)
T ss_pred             CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEE
Confidence            489999988775    888999998774       689999999999999999999886542  4689999999999999


Q ss_pred             ecCCCCCCCCCCEEeeCCC------------------------------------CCcccccceeccCC--ceEEcCCCC
Q 017064          120 VGSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDS  161 (378)
Q Consensus       120 vG~~v~~~~~Gd~V~~~~~------------------------------------~~G~~~~~~~~~~~--~~~~iP~~~  161 (378)
                      +|++|++|++||||++.+.                                    .+|+|+||+.+|+.  .++++|+++
T Consensus        76 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~  155 (393)
T TIGR02819        76 KGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRD  155 (393)
T ss_pred             EcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcc
Confidence            9999999999999976310                                    14899999999964  799999987


Q ss_pred             CH----hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          162 PM----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       162 ~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      +.    .+++++..++.++|+++.. .++++|++|||.|+ |++|++++|+|+++|++++++++   .+++|.++++++|
T Consensus       156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d---~~~~r~~~a~~~G  230 (393)
T TIGR02819       156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGD---LNPARLAQARSFG  230 (393)
T ss_pred             cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHcC
Confidence            53    3466777788899999865 88999999999776 99999999999999999777654   3678999999999


Q ss_pred             CcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCc---------------cHHHHHHhcccCCEEEEEecCC-CCCc--
Q 017064          238 ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLSQGGTMVTYGGMS-KKPI--  298 (378)
Q Consensus       238 a~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~~~--  298 (378)
                      ++.+.+..+. ..+.+.+++++.+ +|++|||+|.+               .++.++++++++|+++.+|... ....  
T Consensus       231 a~~v~~~~~~~~~~~v~~~~~~~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~  309 (393)
T TIGR02819       231 CETVDLSKDATLPEQIEQILGEPE-VDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAV  309 (393)
T ss_pred             CeEEecCCcccHHHHHHHHcCCCC-CcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccc
Confidence            9854433333 3356777777666 99999999985               5789999999999999999653 2111  


Q ss_pred             ---------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---c-eeeccccHHHHHHHHH
Q 017064          299 ---------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---M-ELVPFNNFQTALSKAL  365 (378)
Q Consensus       299 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~-~~~~l~~~~~a~~~~~  365 (378)
                               ++.....+.+++++.+....          ..+.+.++++++.+|++++.   + ++|||+|+++||+.+.
T Consensus       310 ~~~~~~~~~~i~~~~~~~~~~~i~g~~~~----------~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~  379 (393)
T TIGR02819       310 DAAAKTGSLSIRFGLGWAKSHSFHTGQTP----------VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFD  379 (393)
T ss_pred             cccccccccccchHHhhccCceEEeccCC----------hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHh
Confidence                     12223344455555553110          11334678999999998763   4 5799999999999998


Q ss_pred             ccCCCCCceEeeC
Q 017064          366 GLHGSQPKQVIKF  378 (378)
Q Consensus       366 ~~~~~g~kvvv~~  378 (378)
                      +++. + |++|++
T Consensus       380 ~~~~-~-Kvvi~~  390 (393)
T TIGR02819       380 AGAA-K-KFVIDP  390 (393)
T ss_pred             hCCc-e-EEEEeC
Confidence            7754 5 999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-42  Score=326.73  Aligned_cols=305  Identities=21%  Similarity=0.252  Sum_probs=254.0

Q ss_pred             EEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCC
Q 017064           51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPG  130 (378)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  130 (378)
                      +++..++++   +++++.|.|.++++||+|||.++|+|++|++.+.+......++|.++|||++|+|+++|++++.+ +|
T Consensus         2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~G   77 (349)
T TIGR03201         2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IG   77 (349)
T ss_pred             ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CC
Confidence            345556653   78889999999999999999999999999998754332223568999999999999999999887 99


Q ss_pred             CEEeeCCC--------------------------CCcccccceeccCCceEEcCC------CCCHhhhhhccccHHHHHH
Q 017064          131 DWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSK------DSPMEYAATIIVNPLTALR  178 (378)
Q Consensus       131 d~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~------~~~~~~aa~~~~~~~ta~~  178 (378)
                      |+|++.+.                          ..|+|+||++++.+.++++|+      ++++++++++++++.++|+
T Consensus        78 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~  157 (349)
T TIGR03201        78 KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ  157 (349)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence            99986320                          248999999999999999999      8999999999999999999


Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHHHHHH
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKG  254 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~~i~~  254 (378)
                      ++.. ..+++|++|+|+|+ |++|++++|+|+++|++|+++.    .++++.++++++|++++++..+.    ..+.+++
T Consensus       158 a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~  231 (349)
T TIGR03201       158 AAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAID----IDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA  231 (349)
T ss_pred             HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHhCCceEecCccccHHHHHHHHHh
Confidence            9975 78999999999999 9999999999999999988876    47889999999999999987653    2355777


Q ss_pred             HhcCCCCCc----EEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064          255 LLANLPEPA----LGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC  329 (378)
Q Consensus       255 ~~~~~g~~D----vvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (378)
                      +++++| +|    ++|||+|+.. .+.++++++++|+++.+|.... ...++...++.++.++.|.+...          
T Consensus       232 ~t~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~----------  299 (349)
T TIGR03201       232 FAKARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP----------  299 (349)
T ss_pred             hcccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC----------
Confidence            777766 76    8999999865 5678999999999999996543 34455666777788888875321          


Q ss_pred             HHHHHHHHHHHHcCCcccc--ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          330 RNMIDYLLCLAREGKLKYD--MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       330 ~~~~~~~~~~l~~g~~~~~--~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ...++++++++++|++++.  ++.|+|+|+++||+.+.+++..| |+++++
T Consensus       300 ~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~-k~~~~~  349 (349)
T TIGR03201       300 PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKR-RAILTP  349 (349)
T ss_pred             HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccc-eEEecC
Confidence            2457889999999999763  56799999999999999999888 999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.9e-42  Score=321.90  Aligned_cols=313  Identities=23%  Similarity=0.262  Sum_probs=254.5

Q ss_pred             cceEEEcccCCCccceEEeeeCC----CCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCce--eEEEEEec
Q 017064           48 SKAVVYEREGPPDSVIKMIELPP----VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEG--VGEVYSVG  121 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG  121 (378)
                      +|++....+. + +.+++.+.+.    |+|+++||+|||+++++|+.|++...|..+.....|+++|+++  .|++..+|
T Consensus         8 ~~~~~~~~~~-~-~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~   85 (338)
T cd08295           8 LKAYVTGFPK-E-SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD   85 (338)
T ss_pred             EecCCCCCCC-c-cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence            3555543433 2 2388988877    7899999999999999999999988885432124578899754  45666688


Q ss_pred             CCCCCCCCCCEEeeCCCCCcccccceeccC-CceEEcC-CCCCHh-hhhhccccHHHHHHHHHHHhccCCCCEEEEeCCC
Q 017064          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVS-KDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~-~~~~~iP-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~  198 (378)
                      +++++|++||+|+++    |+|+||+++++ ..++++| +++++. ++++++++++|||+++.+.+++++|++|||+|++
T Consensus        86 ~~v~~~~vGd~V~~~----g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~  161 (338)
T cd08295          86 SGNPDFKVGDLVWGF----TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS  161 (338)
T ss_pred             cCCCCCCCCCEEEec----CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence            999999999999975    68999999999 7999995 678887 7999999999999999888899999999999999


Q ss_pred             chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCc--ccHHHHHHHhcCCCCCcEEEeCCCCccHH
Q 017064          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSAS  275 (378)
Q Consensus       199 g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~--~~~~~i~~~~~~~g~~Dvvid~~g~~~~~  275 (378)
                      |++|++++|+|+++|++|++++    .++++.+++++ +|+++++++.+  ...+.+++.++ .| +|++||++|+..+.
T Consensus       162 G~vG~~aiqlAk~~G~~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~g-vd~v~d~~g~~~~~  235 (338)
T cd08295         162 GAVGQLVGQLAKLKGCYVVGSA----GSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NG-IDIYFDNVGGKMLD  235 (338)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CC-cEEEEECCCHHHHH
Confidence            9999999999999999999888    57889999988 99999998654  23355666654 34 99999999998889


Q ss_pred             HHHHhcccCCEEEEEecCCCCCc-----cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-
Q 017064          276 KVLKFLSQGGTMVTYGGMSKKPI-----TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-  349 (378)
Q Consensus       276 ~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-  349 (378)
                      .++++++++|+++.+|.......     ..+...++.+++++.++....+     +....+.++++++++.+|.+++.. 
T Consensus       236 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~l~~~g~l~~~~~  310 (338)
T cd08295         236 AVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY-----LHRYPEFLEEMSGYIKEGKLKYVED  310 (338)
T ss_pred             HHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhh-----HHHHHHHHHHHHHHHHCCCeEceee
Confidence            99999999999999985443221     1233556678888888655432     223456788899999999999764 


Q ss_pred             eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          350 ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       350 ~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ..|+++++++|++.+++++..| |+|+++
T Consensus       311 ~~~~l~~~~~A~~~~~~~~~~G-kvVl~~  338 (338)
T cd08295         311 IADGLESAPEAFVGLFTGSNIG-KQVVKV  338 (338)
T ss_pred             cccCHHHHHHHHHHHhcCCCCc-eEEEEC
Confidence            4699999999999999999999 999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2e-42  Score=319.27  Aligned_cols=293  Identities=17%  Similarity=0.193  Sum_probs=235.7

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccC-hhhhhhhcccCCCC--CCCCccCCCceeEEEEEecCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN-PSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +||++++..++.    +++.+.+.|.++++||+|||.++||| ++|++.+.|.++..  ..+|.++|||++|+|+++|++
T Consensus         1 ~~ka~~~~~~~~----l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLSGPNQ----IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEeCCCe----EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            468898887654    88999999999999999999999995 79999888876432  257999999999999999999


Q ss_pred             CCCCCCCCEEeeCCC--------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          124 VTRLAPGDWVIPSPP--------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~--------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      + +|++||||+....        ..|+|+||++++++.++++|++++++. ++++ .+.|||+++.+ . ..++++|+|+
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~  151 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV  151 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence            8 6999999986321        159999999999999999999999865 4454 47899999976 3 3468999999


Q ss_pred             CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cH
Q 017064          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SA  274 (378)
Q Consensus       196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~  274 (378)
                      |+ |++|++++|+||++|++++++++.   .+++++.++.   .+++|+.+.         .+. ++|+||||+|++ .+
T Consensus       152 G~-G~vG~~a~q~ak~~G~~~v~~~~~---~~~rl~~a~~---~~~i~~~~~---------~~~-g~Dvvid~~G~~~~~  214 (308)
T TIGR01202       152 GH-GTLGRLLARLTKAAGGSPPAVWET---NPRRRDGATG---YEVLDPEKD---------PRR-DYRAIYDASGDPSLI  214 (308)
T ss_pred             CC-CHHHHHHHHHHHHcCCceEEEeCC---CHHHHHhhhh---ccccChhhc---------cCC-CCCEEEECCCCHHHH
Confidence            87 999999999999999997777643   5566655543   344544321         122 399999999986 46


Q ss_pred             HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---cee
Q 017064          275 SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MEL  351 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~  351 (378)
                      +.++++++++|+++++|... .+..++...++.+++++.++...          ..+.++++++++++|++++.   +++
T Consensus       215 ~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~l~~~g~i~~~~~it~~  283 (308)
T TIGR01202       215 DTLVRRLAKGGEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEW----------QPGDLHAVRELIESGALSLDGLITHQ  283 (308)
T ss_pred             HHHHHhhhcCcEEEEEeecC-CCcccccchhhhcceEEEEeccc----------chhHHHHHHHHHHcCCCChhhcccee
Confidence            89999999999999999653 34556666777889998876432          12568899999999999863   578


Q ss_pred             eccccHHHHHHHHHccCCCCCceEee
Q 017064          352 VPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       352 ~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      |||+|+++||+.+.++...+ |++|+
T Consensus       284 ~~l~~~~~A~~~~~~~~~~~-Kv~~~  308 (308)
T TIGR01202       284 RPASDAAEAYMTAFSDPDCL-KMILD  308 (308)
T ss_pred             ecHHHHHHHHHHHhcCcCce-EEEeC
Confidence            99999999999988777777 99874

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=4.7e-42  Score=323.41  Aligned_cols=305  Identities=22%  Similarity=0.280  Sum_probs=235.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++++...+.  + ++++++|.|.++++||+|||.++|+|++|++.+.|.++..+  .+|.++|||++|+|+++|++ +
T Consensus         1 mka~~~~~~~~--~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~   76 (355)
T cd08230           1 MKAIAVKPGKP--G-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S   76 (355)
T ss_pred             CceeEecCCCC--C-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence            68888875332  2 78999999999999999999999999999999998754322  35789999999999999999 9


Q ss_pred             CCCCCCEEeeCCC-----------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064          126 RLAPGDWVIPSPP-----------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-----------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      .|++||+|+..+.                             .+|+|+||++++++.++++|++++ ++ +++..+..++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~  154 (355)
T cd08230          77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVV  154 (355)
T ss_pred             CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cc-eeecchHHHH
Confidence            9999999986431                             248899999999999999999999 43 4444456555


Q ss_pred             HHHHHHH------hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHH
Q 017064          177 LRMLEDF------TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK  250 (378)
Q Consensus       177 ~~~l~~~------~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~  250 (378)
                      +.++...      ..+.+|++|+|.|+ |++|++++|+||++|++|+++.+.. .+++|+++++++|+++ +++.+.+..
T Consensus       155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~-v~~~~~~~~  231 (355)
T cd08230         155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATY-VNSSKTPVA  231 (355)
T ss_pred             HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE-ecCCccchh
Confidence            5544321      23578999999997 9999999999999999988887421 1578889999999997 455544433


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCC-CCcccc----chhhhhcCceEEEEechhhhccc
Q 017064          251 NVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSK-KPITVS----TSAFIFKDLSLKGFWLQKWLSSE  324 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  324 (378)
                      + .+.  .. ++|+||||+|.+ .+..++++++++|+++.+|.... ...+++    ...++.+++++.|+....     
T Consensus       232 ~-~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----  302 (355)
T cd08230         232 E-VKL--VG-EFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN-----  302 (355)
T ss_pred             h-hhh--cC-CCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc-----
Confidence            3 222  22 499999999985 56889999999999999996654 233444    345677999999975431     


Q ss_pred             cHHHHHHHHHHHHHHHHcCC------cccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          325 KATECRNMIDYLLCLAREGK------LKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~g~------~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                           .+.++++++++.++.      +++. +++|+++|+++|++.+.++  .+ |+||+|
T Consensus       303 -----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~--~~-K~v~~~  355 (355)
T cd08230         303 -----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDG--EI-KVVIEW  355 (355)
T ss_pred             -----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccC--Ce-EEEeeC
Confidence                 134567777877766      4443 5689999999999988754  35 999986

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.1e-41  Score=320.61  Aligned_cols=306  Identities=25%  Similarity=0.342  Sum_probs=256.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC---CC-------CCCCCccCCCceeEEE
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY---PV-------RPKVPAVGGYEGVGEV  117 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~-------~~~~p~~~G~e~~G~V  117 (378)
                      ||++++..+++    +.+++++.|.++++||+||+.++++|++|+..+.+..   +.       ....|.++|||++|+|
T Consensus         1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   76 (351)
T cd08233           1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV   76 (351)
T ss_pred             CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence            68999987654    8899999999999999999999999999988765421   10       1136889999999999


Q ss_pred             EEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064          118 YSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (378)
Q Consensus       118 ~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~  170 (378)
                      +++|+++++|++||+|++...                           ..|+|++|++++.+.++++|+++++++++.+ 
T Consensus        77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-  155 (351)
T cd08233          77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-  155 (351)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence            999999999999999987321                           1489999999999999999999999999876 


Q ss_pred             ccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-
Q 017064          171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-  248 (378)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-  248 (378)
                      .+..|||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.    .++++.++++++|++.++++++.+ 
T Consensus       156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~----~~~~~~~~~~~~ga~~~i~~~~~~~  229 (351)
T cd08233         156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSE----PSEARRELAEELGATIVLDPTEVDV  229 (351)
T ss_pred             cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCccCH
Confidence            5688999999 5688999999999986 9999999999999999 676665    478888888999999999987654 


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHH
Q 017064          249 VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT  327 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (378)
                      .+.+++.+++.+ +|++|||+|. ..+..++++++++|+++.+|... .+.++++..++.+++++.+.....        
T Consensus       230 ~~~l~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~--------  299 (351)
T cd08233         230 VAEVRKLTGGGG-VDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT--------  299 (351)
T ss_pred             HHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC--------
Confidence            456777777655 9999999986 56789999999999999999654 445667777888999999875431        


Q ss_pred             HHHHHHHHHHHHHHcCCcccc---ceeeccccH-HHHHHHHHccCCC-CCceEee
Q 017064          328 ECRNMIDYLLCLAREGKLKYD---MELVPFNNF-QTALSKALGLHGS-QPKQVIK  377 (378)
Q Consensus       328 ~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~-~~a~~~~~~~~~~-g~kvvv~  377 (378)
                        .+.++++++++++|.+++.   .++|+++|+ ++|++.+.+++.. | |+||.
T Consensus       300 --~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~-k~v~~  351 (351)
T cd08233         300 --REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHV-KILVS  351 (351)
T ss_pred             --cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCce-EEEeC
Confidence              2567889999999999653   458999996 7999999999975 6 99873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=8.5e-42  Score=327.04  Aligned_cols=311  Identities=15%  Similarity=0.130  Sum_probs=247.7

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhh-cccC-CC----CCCCCccCCCceeEEEEEe
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVY-PV----RPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~-~~----~~~~p~~~G~e~~G~V~~v  120 (378)
                      .|+++++..++.    ++++++|.|.++++||+|||.++|+|++|++.+ .|.. +.    ..++|.++|||++|+|+++
T Consensus         2 ~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v   77 (410)
T cd08238           2 KTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV   77 (410)
T ss_pred             CcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence            478999988764    889999999999999999999999999999976 4532 11    1136889999999999999


Q ss_pred             cCCCC-CCCCCCEEeeCCC---------------CCcccccceeccCC----ceEEcCCCCCHhhhhhc-ccc-HHHHHH
Q 017064          121 GSAVT-RLAPGDWVIPSPP---------------SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATI-IVN-PLTALR  178 (378)
Q Consensus       121 G~~v~-~~~~Gd~V~~~~~---------------~~G~~~~~~~~~~~----~~~~iP~~~~~~~aa~~-~~~-~~ta~~  178 (378)
                      |++|+ +|++||||++.+.               .+|+|+||++++++    +++++|+++++++++.+ +++ ..+++.
T Consensus        78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~  157 (410)
T cd08238          78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT  157 (410)
T ss_pred             CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence            99998 6999999987531               14899999999987    68999999999999866 311 112333


Q ss_pred             HH--------HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC---cEEEEecCCCCcHHHHHHHHhC--------CCc
Q 017064          179 ML--------EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGL--------GAD  239 (378)
Q Consensus       179 ~l--------~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~---~vi~~~~~~~~~~~~~~~~~~~--------ga~  239 (378)
                      ++        ...+++++|++|+|+|++|++|++++|+|+++|+   +|+++.    .+++|++.++++        |++
T Consensus       158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~----~~~~r~~~a~~~~~~~~~~~Ga~  233 (410)
T cd08238         158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTD----VNDERLARAQRLFPPEAASRGIE  233 (410)
T ss_pred             hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEc----CCHHHHHHHHHhccccccccCce
Confidence            32        2457889999999999889999999999999864   677776    578899999887        777


Q ss_pred             -EEEccCc--ccHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC--CCccccchhhhhcCceEE
Q 017064          240 -EVFTESQ--LEVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK--KPITVSTSAFIFKDLSLK  313 (378)
Q Consensus       240 -~vi~~~~--~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~  313 (378)
                       .++++.+  ...+.+++++++.+ +|++||++|. ..+..++++++++|+++.++....  .+.+++...++.+++++.
T Consensus       234 ~~~i~~~~~~~~~~~v~~~t~g~g-~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~  312 (410)
T cd08238         234 LLYVNPATIDDLHATLMELTGGQG-FDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV  312 (410)
T ss_pred             EEEECCCccccHHHHHHHHhCCCC-CCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence             5677653  33456777887766 9999999986 566889999999999887754322  124566677888999999


Q ss_pred             EEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          314 GFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      |+....          .+.++++++++++|++++.   +++|+|+|+++|++.+. ++..| |+|+.+
T Consensus       313 g~~~~~----------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~g-Kvvl~~  368 (410)
T cd08238         313 GTSGGN----------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGG-KKLIYT  368 (410)
T ss_pred             EeCCCC----------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCc-eEEEEC
Confidence            976431          2457889999999999973   57899999999999999 77788 999864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.8e-41  Score=314.97  Aligned_cols=309  Identities=26%  Similarity=0.335  Sum_probs=253.8

Q ss_pred             ccceEEEccc--CCC-ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           47 PSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        47 ~~~a~~~~~~--~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +|++|++..+  +.+ .+.+++.+.+.|.|+++||+|||.++|+|+.|......  +  .+.|.++|+|++|+|++   .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~   74 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---K   74 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---C
Confidence            5899999984  443 24589999999999999999999999999987652211  1  13588999999999995   4


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccCC---ceEEcCCCCC-----HhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQS---VWHKVSKDSP-----MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~---~~~~iP~~~~-----~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      +++|++||+|++.    ++|++|++++.+   .++++|++++     ...+++++++++|||+++...+++++|++|||+
T Consensus        75 ~~~~~~Gd~V~~~----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~  150 (329)
T cd08294          75 NSKFPVGTIVVAS----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN  150 (329)
T ss_pred             CCCCCCCCEEEee----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence            5689999999975    579999999999   9999999998     233346788999999999888999999999999


Q ss_pred             CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      |++|++|++++|+|+++|++|++++    .++++.++++++|+++++++++.+ .+.+++.++ .+ +|++||++|++.+
T Consensus       151 ga~g~vG~~aiqlA~~~G~~vi~~~----~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~g-vd~vld~~g~~~~  224 (329)
T cd08294         151 GAAGAVGSLVGQIAKIKGCKVIGCA----GSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DG-IDCYFDNVGGEFS  224 (329)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CC-cEEEEECCCHHHH
Confidence            9999999999999999999999888    578899999999999999988654 455666665 34 9999999999888


Q ss_pred             HHHHHhcccCCEEEEEecCCCCCc------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc
Q 017064          275 SKVLKFLSQGGTMVTYGGMSKKPI------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD  348 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  348 (378)
                      ..++++++++|+++.+|.......      ......++.+++++.++....+     .....+.++++++++++|.+++.
T Consensus       225 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~  299 (329)
T cd08294         225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW-----QDRWPEALKQLLKWIKEGKLKYR  299 (329)
T ss_pred             HHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh-----HHHHHHHHHHHHHHHHCCCCcCC
Confidence            999999999999999985432111      1123346678888888765432     13445678899999999999875


Q ss_pred             -ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          349 -MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       349 -~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       ...|+++++++|++.+.+++..| |+|+++
T Consensus       300 ~~~~~~l~~~~~A~~~~~~~~~~g-kvvv~~  329 (329)
T cd08294         300 EHVTEGFENMPQAFIGMLKGENTG-KAIVKV  329 (329)
T ss_pred             cccccCHHHHHHHHHHHHcCCCCC-eEEEeC
Confidence             35699999999999999999999 999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.2e-41  Score=315.23  Aligned_cols=294  Identities=23%  Similarity=0.336  Sum_probs=242.9

Q ss_pred             ceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCc
Q 017064           62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG  141 (378)
Q Consensus        62 ~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G  141 (378)
                      ++++.+.+.|.|++|||+|||.++|+|+.++.   |.++.. ..|.++|+|++|+|+++|+   .|++||+|++.    +
T Consensus        18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----~   86 (325)
T TIGR02825        18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----P   86 (325)
T ss_pred             ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe----c
Confidence            38899999999999999999999999997654   333222 3478999999999999874   59999999975    4


Q ss_pred             ccccceeccCCceEEc----CCCCCHhhh-hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcE
Q 017064          142 TWQSYVVKDQSVWHKV----SKDSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS  216 (378)
Q Consensus       142 ~~~~~~~~~~~~~~~i----P~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~v  216 (378)
                      +|++|++++.+++.++    |++++++++ ++++++++|||+++...+++++|++|||+|++|++|++++|+||++|++|
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~V  166 (325)
T TIGR02825        87 GWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV  166 (325)
T ss_pred             CceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEE
Confidence            6999999999988887    999999997 68899999999999888999999999999999999999999999999999


Q ss_pred             EEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHH-HHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC
Q 017064          217 INIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       217 i~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~-i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++++    .++++.++++++|+++++++++. +..+ ++..+ +.| +|++||++|++.+..++++++++|+++.+|...
T Consensus       167 i~~~----~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~g-vdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       167 VGAA----GSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDG-YDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             EEEe----CCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCC-eEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence            9888    57889999999999999998763 4444 44444 434 999999999988899999999999999998543


Q ss_pred             CC----Ccc--ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHHcc
Q 017064          295 KK----PIT--VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGL  367 (378)
Q Consensus       295 ~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~  367 (378)
                      ..    ...  .....++.+++++.++....+    .+....+.++++++++++|++++.. ..|+++++++|++.+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~  316 (325)
T TIGR02825       241 TYNRTGPLPPGPPPEIVIYQELRMEGFIVNRW----QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKG  316 (325)
T ss_pred             hcccCCCCCCCcchHHHhhhcceEeEEEehhh----hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcC
Confidence            21    111  123345668888888765433    2233456788999999999999864 569999999999999999


Q ss_pred             CCCCCceEee
Q 017064          368 HGSQPKQVIK  377 (378)
Q Consensus       368 ~~~g~kvvv~  377 (378)
                      +..| |+|++
T Consensus       317 ~~~g-kvVv~  325 (325)
T TIGR02825       317 ENLG-KTIVK  325 (325)
T ss_pred             CCCC-eEEeC
Confidence            9998 99874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3.4e-41  Score=316.59  Aligned_cols=303  Identities=22%  Similarity=0.249  Sum_probs=239.2

Q ss_pred             cceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccC--CCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC
Q 017064           61 SVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP  137 (378)
Q Consensus        61 ~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  137 (378)
                      +.+++.+.+.|.+. ++||+|||+++|||+.|+.......  ....++|.++|||++|+|+++|+++++|++||+|++..
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  100 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN  100 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence            35889999999874 9999999999999999965433211  11124678999999999999999999999999998752


Q ss_pred             CCCcccccceeccCCceEEcCCCCCHhh----hhhccccHHHHHHHHHHHhccCCC--CEEEEeCCCchHHHHHHHHHHH
Q 017064          138 PSSGTWQSYVVKDQSVWHKVSKDSPMEY----AATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARH  211 (378)
Q Consensus       138 ~~~G~~~~~~~~~~~~~~~iP~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~VlV~g~~g~~G~~av~la~~  211 (378)
                         ++|+||+++++++++++|+++++.+    +++++.+++|||+++.+.+++++|  ++|||+|++|++|++++|+|++
T Consensus       101 ---~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~  177 (345)
T cd08293         101 ---WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL  177 (345)
T ss_pred             ---CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence               5799999999999999999864322    456777899999999887888877  9999999999999999999999


Q ss_pred             cCC-cEEEEecCCCCcHHHHHHHHh-CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064          212 RGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV  288 (378)
Q Consensus       212 ~g~-~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v  288 (378)
                      +|+ +|++++    .++++.+.+++ +|+++++++++.+ .+.++++++ .| +|++||++|+..+..++++++++|+++
T Consensus       178 ~G~~~Vi~~~----~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~g-vd~vid~~g~~~~~~~~~~l~~~G~iv  251 (345)
T cd08293         178 LGCSRVVGIC----GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EG-VDVYFDNVGGEISDTVISQMNENSHII  251 (345)
T ss_pred             cCCCEEEEEc----CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CC-ceEEEECCCcHHHHHHHHHhccCCEEE
Confidence            999 788887    57888888876 9999999987654 456777765 34 999999999988899999999999999


Q ss_pred             EEecCCCC--Cccc----cc--hhh-hhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHH
Q 017064          289 TYGGMSKK--PITV----ST--SAF-IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQ  358 (378)
Q Consensus       289 ~~g~~~~~--~~~~----~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~  358 (378)
                      .+|.....  +...    ..  ..+ ..+++++.++....     .+....+.++++++++++|.+++... .+++++++
T Consensus       252 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~  326 (345)
T cd08293         252 LCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN-----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAG  326 (345)
T ss_pred             EEeeeecccCccCccccccchhHHHhhhcceEEEEEEeec-----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHH
Confidence            99853221  1111    11  111 22444444332211     12344567888999999999987643 46999999


Q ss_pred             HHHHHHHccCCCCCceEeeC
Q 017064          359 TALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       359 ~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +|++.+.+++..| |+|+++
T Consensus       327 ~A~~~~~~~~~~g-kvvl~~  345 (345)
T cd08293         327 EAFQSMMNGGNIG-KQIVKV  345 (345)
T ss_pred             HHHHHHhcCCCCC-eEEEEC
Confidence            9999999999888 999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.9e-41  Score=316.33  Aligned_cols=311  Identities=25%  Similarity=0.271  Sum_probs=249.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCc-cCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-VGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~  126 (378)
                      |++++...++..   .++++.+.|.+.++||+|||.++|||++|++.+++..+.. +.|. ++|||++|+|+++| .++.
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~   75 (350)
T COG1063           1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRG   75 (350)
T ss_pred             CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccC
Confidence            566666665542   3366666667899999999999999999999999976654 3344 99999999999999 7788


Q ss_pred             CCCCCEEeeCCCC-------------------------------CcccccceeccCCceEE-cCCCCCHhhhhhccccHH
Q 017064          127 LAPGDWVIPSPPS-------------------------------SGTWQSYVVKDQSVWHK-VSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       127 ~~~Gd~V~~~~~~-------------------------------~G~~~~~~~~~~~~~~~-iP~~~~~~~aa~~~~~~~  174 (378)
                      +++||||+..+..                               +|+|+||+.+|.+++++ +|++++++.|+... ++.
T Consensus        76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~e-pla  154 (350)
T COG1063          76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTE-PLA  154 (350)
T ss_pred             CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcC-hhh
Confidence            9999999876531                               48999999999765555 58888655555555 688


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcc-cHHHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNV  252 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~-~~~~i  252 (378)
                      ++|++........++++|+|+|+ |++|++++++|+..|+..+++++   .+++|++++++ .|++.+++.... ....+
T Consensus       155 ~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d---~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~  230 (350)
T COG1063         155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVD---RSPERLELAKEAGGADVVVNPSEDDAGAEI  230 (350)
T ss_pred             hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence            89877555566666679999999 99999999999999997777775   48999999998 777777776663 45678


Q ss_pred             HHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      .++++++| +|++|||+|... +.+++++++++|+++++|........++...++.|++++.|+....         ...
T Consensus       231 ~~~t~g~g-~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~---------~~~  300 (350)
T COG1063         231 LELTGGRG-ADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS---------GRE  300 (350)
T ss_pred             HHHhCCCC-CCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCC---------Ccc
Confidence            88888877 999999999754 5899999999999999996644322567788999999999984311         224


Q ss_pred             HHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          332 MIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++.+++++.+|++++.   ++.++++++++||+.+.+.+....|+++.+
T Consensus       301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            68889999999999986   578999999999999998665334999875

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=5.1e-41  Score=320.63  Aligned_cols=318  Identities=21%  Similarity=0.280  Sum_probs=264.2

Q ss_pred             CCcccceEEEc--ccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCC---------CCCCccCCCc
Q 017064           44 MSPPSKAVVYE--REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR---------PKVPAVGGYE  112 (378)
Q Consensus        44 ~~~~~~a~~~~--~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e  112 (378)
                      .|.+|+++++.  ..+.+.+.+++.+++.|.++++||+|||.++++|++|+....|.....         ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            78889998885  344444448899999999999999999999999999998876641100         0123588999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhh
Q 017064          113 GVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEY  165 (378)
Q Consensus       113 ~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~  165 (378)
                      ++|+|+++|++++.+++||+|++.+.                           ..|+|++|++++...++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999998642                           148999999999999999999999999


Q ss_pred             hhhccccHHHHHHHHHHH--hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          166 AATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       166 aa~~~~~~~ta~~~l~~~--~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      ++.+++++.|||+++...  +++++|++|+|+|++|++|++++++|+++|+++++++    .++++.+.++++|++++++
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~----~s~~~~~~~~~~G~~~~i~  244 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGAEGVIN  244 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCCEEEc
Confidence            999999999999998765  6789999999999999999999999999999998887    5788999999999999998


Q ss_pred             cCcc-----------------------cHHHHHHHhcCC-CCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcc
Q 017064          244 ESQL-----------------------EVKNVKGLLANL-PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT  299 (378)
Q Consensus       244 ~~~~-----------------------~~~~i~~~~~~~-g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  299 (378)
                      .++.                       +...+.+++++. + +|++|||+|+..+..++++++++|+++.+|........
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g-~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  323 (393)
T cd08246         245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGRED-PDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT  323 (393)
T ss_pred             ccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCC-CeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence            6432                       234577778876 5 99999999988888999999999999999865443344


Q ss_pred             ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHcc-CCCCCceEee
Q 017064          300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGL-HGSQPKQVIK  377 (378)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~-~~~g~kvvv~  377 (378)
                      ++...++.++.++.+.+...+          +.+.+++++++++.+.+. ++.|+++++++|++.+.++ +..| |+++-
T Consensus       324 ~~~~~l~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~g-kvvv~  392 (393)
T cd08246         324 YDNRYLWMRQKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVG-NMAVL  392 (393)
T ss_pred             CcHHHHhhheeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccc-eEEEe
Confidence            555666778888888754321          457788899999998865 4689999999999999988 7888 88863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.8e-41  Score=316.02  Aligned_cols=293  Identities=18%  Similarity=0.191  Sum_probs=230.2

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC---CCCCCccCCCceeEEEEEecCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---RPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      +++++..+++    +++++.|.|. +++||+|||.++|||++|++.+.|.++.   ...+|.++|||++|+|+++|.+  
T Consensus         4 ~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--   76 (341)
T cd08237           4 QVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--   76 (341)
T ss_pred             cceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence            6777877775    8999999985 9999999999999999999999986532   1257999999999999998764  


Q ss_pred             CCCCCCEEeeCCC-----------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH
Q 017064          126 RLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED  182 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-----------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~  182 (378)
                      +|++||||+..+.                       .+|+|+||+++|+++++++|+++++++|+++. +..++|+++..
T Consensus        77 ~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~  155 (341)
T cd08237          77 TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISR  155 (341)
T ss_pred             ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHH
Confidence            7999999987532                       14889999999999999999999999887654 68889998865


Q ss_pred             H--hccCCCCEEEEeCCCchHHHHHHHHHHH-cC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC
Q 017064          183 F--TTLNSGDSIVQNGATSIVGQCIIQIARH-RG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       183 ~--~~~~~g~~VlV~g~~g~~G~~av~la~~-~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      .  +.+++|++|||.|+ |++|++++|+|++ .| ++|+++.    .+++|++.++..++++.++.          ...+
T Consensus       156 ~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~----~~~~k~~~a~~~~~~~~~~~----------~~~~  220 (341)
T cd08237         156 FEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFG----KHQEKLDLFSFADETYLIDD----------IPED  220 (341)
T ss_pred             HhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEe----CcHhHHHHHhhcCceeehhh----------hhhc
Confidence            3  35688999999997 9999999999986 55 5677766    46788888888776654321          1122


Q ss_pred             CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064          259 LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID  334 (378)
Q Consensus       259 ~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (378)
                      .+ +|+|||++|+.    .+..++++++++|+++.+|.. ..+.+++...++.+++++.|+....          .+.++
T Consensus       221 ~g-~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~~~i~g~~~~~----------~~~~~  288 (341)
T cd08237         221 LA-VDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVS-EYPVPINTRMVLEKGLTLVGSSRST----------REDFE  288 (341)
T ss_pred             cC-CcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeec-CCCcccCHHHHhhCceEEEEecccC----------HHHHH
Confidence            24 99999999953    468899999999999999954 3344566677888999999975421          24577


Q ss_pred             HHHHHHHcC-----Ccccc-ceeeccc---cHHHHHHHHHccCCCCCceEeeC
Q 017064          335 YLLCLAREG-----KLKYD-MELVPFN---NFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       335 ~~~~~l~~g-----~~~~~-~~~~~l~---~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++.++     .+++. .++|+++   +++++|+.+.++ ..| |+||++
T Consensus       289 ~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~g-Kvvi~~  339 (341)
T cd08237         289 RAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWG-KTVMEW  339 (341)
T ss_pred             HHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-Ccc-eEEEEe
Confidence            889999998     34444 3679985   566666666554 677 999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=9e-41  Score=313.07  Aligned_cols=309  Identities=26%  Similarity=0.326  Sum_probs=263.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++++..++.+   +.+.+.+.|.+++++|+||+.++++|++|+....|.++.  ...+|.++|+|++|+|+++|+++.
T Consensus         1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~   77 (340)
T cd05284           1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD   77 (340)
T ss_pred             CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence            688999887643   788899999999999999999999999999998887653  234688999999999999999999


Q ss_pred             CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      .+++||+|++...                          ..|+|++|+.++.++++++|+++++++++++++.++|||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~  157 (340)
T cd05284          78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA  157 (340)
T ss_pred             cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            9999999997641                          14899999999999999999999999999999999999999


Q ss_pred             HHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhc
Q 017064          180 LEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       180 l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      +... ..+.+|++|||+|+ |++|++++|+|+.+| ++|++++    .++++.+.++++|++++++++.....+++++++
T Consensus       158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~  232 (340)
T cd05284         158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVD----RSEEALKLAERLGADHVLNASDDVVEEVRELTG  232 (340)
T ss_pred             HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEe----CCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhC
Confidence            9876 46889999999996 679999999999999 7998887    467888888999999999887765566777777


Q ss_pred             CCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          258 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       258 ~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                      +.+ +|+++||+|+ .....++++++++|+++.+|....  ..++....+.+++++.++...          ..+.++++
T Consensus       233 ~~~-~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  299 (340)
T cd05284         233 GRG-ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG----------TRAELVEV  299 (340)
T ss_pred             CCC-CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEecc----------cHHHHHHH
Confidence            655 9999999997 667899999999999999985432  333444445789998887542          12457788


Q ss_pred             HHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++|.+++.++.|+++++++|++.+.+++..| |+|+.+
T Consensus       300 ~~~l~~g~l~~~~~~~~~~~~~~a~~~~~~~~~~g-kvv~~~  340 (340)
T cd05284         300 VALAESGKVKVEITKFPLEDANEALDRLREGRVTG-RAVLVP  340 (340)
T ss_pred             HHHHHhCCCCcceEEEeHHHHHHHHHHHHcCCccc-eEEecC
Confidence            89999999988778899999999999999999888 998864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.9e-41  Score=311.80  Aligned_cols=304  Identities=21%  Similarity=0.288  Sum_probs=258.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++..   +++++.|.|.+.++||+||+.++++|++|+..+.|..+.. ..|.++|||++|+|+++|+++.++
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~   76 (333)
T cd08296           1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL-SYPRVPGHEVVGRIDAVGEGVSRW   76 (333)
T ss_pred             CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC-CCCcccCcceeEEEEEECCCCccC
Confidence            689999988543   8889999999999999999999999999999988865432 458899999999999999999999


Q ss_pred             CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++.+                           ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            9999998631                           1148899999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~  259 (378)
                      .. ..+.++++|||+| +|++|++++++|+++|+++++++    .++++.+.++++|+++++++...+. ..+++. .  
T Consensus       157 ~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~-~--  227 (333)
T cd08296         157 RN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAIS----RGSDKADLARKLGAHHYIDTSKEDVAEALQEL-G--  227 (333)
T ss_pred             Hh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHcCCcEEecCCCccHHHHHHhc-C--
Confidence            76 4899999999999 59999999999999999998887    4778899999999999998876543 345444 2  


Q ss_pred             CCCcEEEeCCC-CccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVG-GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                       ++|+++|++| +..+..++++++++|+++.+|... ...+++...++.+++++.++....          ...++.+++
T Consensus       228 -~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~  295 (333)
T cd08296         228 -GAKLILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT----------ALDSEDTLK  295 (333)
T ss_pred             -CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC----------HHHHHHHHH
Confidence             3999999987 466788999999999999999654 344555566778999999986431          135667788


Q ss_pred             HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      +++.+.+++.++.|+++++.+|++.+.+++..| |+|++
T Consensus       296 ~~~~~~l~~~v~~~~~~~~~~a~~~~~~~~~~g-k~v~~  333 (333)
T cd08296         296 FSALHGVRPMVETFPLEKANEAYDRMMSGKARF-RVVLT  333 (333)
T ss_pred             HHHhCCCCceEEEEEHHHHHHHHHHHHCCCCce-eEEeC
Confidence            888998887677899999999999999999999 99874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=8.6e-41  Score=315.70  Aligned_cols=308  Identities=24%  Similarity=0.322  Sum_probs=254.3

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC--
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR--  126 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--  126 (378)
                      |++++..+++.   +++++.+.|.++++||+|||.++++|++|+....|.++. ..+|.++|||++|+|+++|+++++  
T Consensus         2 ka~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (361)
T cd08231           2 RAAVLTGPGKP---LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDV   77 (361)
T ss_pred             eEEEEcCCCCC---CEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccc
Confidence            67888887742   889999999999999999999999999999999887653 356889999999999999999986  


Q ss_pred             ----CCCCCEEeeCCC---------------------------------CCcccccceeccCC-ceEEcCCCCCHhhhhh
Q 017064          127 ----LAPGDWVIPSPP---------------------------------SSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT  168 (378)
Q Consensus       127 ----~~~Gd~V~~~~~---------------------------------~~G~~~~~~~~~~~-~~~~iP~~~~~~~aa~  168 (378)
                          |++||+|++.+.                                 ..|+|++|++++++ +++++|++++++++++
T Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~  157 (361)
T cd08231          78 AGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP  157 (361)
T ss_pred             cCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHH
Confidence                999999988631                                 24899999999996 7999999999999999


Q ss_pred             ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      ++++++|||+++.....+.+|++|||+|+ |++|++++|+|+++|+ +|++++    .++++.++++++|++.+++.+..
T Consensus       158 ~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~  232 (361)
T cd08231         158 ANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVID----GSPERLELAREFGADATIDIDEL  232 (361)
T ss_pred             hcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCCeEEcCccc
Confidence            98999999999988666779999999985 9999999999999999 888776    47888889999999999987654


Q ss_pred             cH----HHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEechhhh
Q 017064          248 EV----KNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWL  321 (378)
Q Consensus       248 ~~----~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (378)
                      ..    ..+++.+++.+ +|++|||+|+ ..+..++++++++|+++.+|.... ...+++...++.+++++.++....  
T Consensus       233 ~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  309 (361)
T cd08231         233 PDPQRRAIVRDITGGRG-ADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD--  309 (361)
T ss_pred             ccHHHHHHHHHHhCCCC-CcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC--
Confidence            21    35777777766 9999999987 456899999999999999986532 223444455678999998876432  


Q ss_pred             ccccHHHHHHHHHHHHHHHHcC--Ccc--cc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          322 SSEKATECRNMIDYLLCLAREG--KLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~l~~g--~~~--~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                          +    +.++++++++.++  .++  .. +++|+++++++|++.+++++ .+ |+||++
T Consensus       310 ----~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~-k~vi~~  361 (361)
T cd08231         310 ----P----SHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-AL-KVVIDP  361 (361)
T ss_pred             ----c----hhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ce-EEEeCC
Confidence                1    2356666777766  333  23 56799999999999998876 46 999874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-40  Score=308.73  Aligned_cols=324  Identities=26%  Similarity=0.288  Sum_probs=272.5

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |||++++..++.... +.+.+.+.|++.++||+|||.++++|+.|.....|..+.....|.++|||++|+|+++|++++.
T Consensus         1 ~m~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~   79 (334)
T PTZ00354          1 MMRAVTLKGFGGVDV-LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKR   79 (334)
T ss_pred             CcEEEEEEecCCCcc-eEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCC
Confidence            689999998876543 7778888888999999999999999999999888765433345678999999999999999999


Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av  206 (378)
                      +++||+|+++.. .|+|++|++++.+.++++|+++++.+++.+++++.+||+++...+.+.+|++|+|+|++|++|++++
T Consensus        80 ~~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~  158 (334)
T PTZ00354         80 FKEGDRVMALLP-GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA  158 (334)
T ss_pred             CCCCCEEEEecC-CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence            999999998753 4899999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc--cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG  284 (378)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~  284 (378)
                      ++|+++|+++++++    .++++.+.++++|++++++....  ....+.+.+++.+ +|++|||+|+..+..++++++++
T Consensus       159 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~  233 (334)
T PTZ00354        159 QLAEKYGAATIITT----SSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKG-VNLVLDCVGGSYLSETAEVLAVD  233 (334)
T ss_pred             HHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhccC
Confidence            99999999988877    47888888899999999987653  3466777777666 99999999988889999999999


Q ss_pred             CEEEEEecCCCCCcc-ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064          285 GTMVTYGGMSKKPIT-VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS  362 (378)
Q Consensus       285 G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~  362 (378)
                      |+++.++........ ++...++.++.++.++..........+....+.+++++++++++.+++. .+.|++++++++++
T Consensus       234 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  313 (334)
T PTZ00354        234 GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHT  313 (334)
T ss_pred             CeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHH
Confidence            999999855443333 5555666777788887654321212334455677889999999998865 46799999999999


Q ss_pred             HHHccCCCCCceEeeC
Q 017064          363 KALGLHGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~~~~g~kvvv~~  378 (378)
                      .+.+++..+ |+|++|
T Consensus       314 ~~~~~~~~~-kvvv~~  328 (334)
T PTZ00354        314 FLEQNKNIG-KVVLTV  328 (334)
T ss_pred             HHHhCCCCc-eEEEec
Confidence            999888888 999875

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5.9e-40  Score=305.34  Aligned_cols=319  Identities=22%  Similarity=0.275  Sum_probs=268.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++.+.+++.+.. +++.+.+.|.+.+++|+|+|.++++|++|+....|..+.  ....|.++|||++|+|+++|+++.
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGPPEV-LVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCCccc-eEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            68888887666543 777787777889999999999999999999988876532  224578899999999999999999


Q ss_pred             CCCCCCEEeeCCC-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064          126 RLAPGDWVIPSPP-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~  204 (378)
                      .+++||+|++... ..|+|++|++++.++++++|+++++.+++.+++.++||| ++...++++++++|+|+|++|++|++
T Consensus        80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~  158 (324)
T cd08244          80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSL  158 (324)
T ss_pred             CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHH
Confidence            9999999998751 138999999999999999999999999999999999995 55566889999999999999999999


Q ss_pred             HHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064          205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ  283 (378)
Q Consensus       205 av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~  283 (378)
                      ++++|+++|+++++++    .++++.+.++++|++++++..+.. .+.+.+.+++++ +|+++||+|+.....+++++++
T Consensus       159 ~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~  233 (324)
T cd08244         159 LVQLAKAAGATVVGAA----GGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGG-VTVVLDGVGGAIGRAALALLAP  233 (324)
T ss_pred             HHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC-ceEEEECCChHhHHHHHHHhcc
Confidence            9999999999999888    467788888999999998877644 456777777666 9999999999888999999999


Q ss_pred             CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064          284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS  362 (378)
Q Consensus       284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~  362 (378)
                      +|+++.+|.....+..++....+.+++++.++....+    .+....+.+++++++++++.++.. ...|+++++++|++
T Consensus       234 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~  309 (324)
T cd08244         234 GGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQA----ERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHA  309 (324)
T ss_pred             CcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccC----CHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHH
Confidence            9999999865443334454556788999998876432    224556788889999999998765 46799999999999


Q ss_pred             HHHccCCCCCceEeeC
Q 017064          363 KALGLHGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~~~~g~kvvv~~  378 (378)
                      .+.+++..| |+|+++
T Consensus       310 ~~~~~~~~~-kvv~~~  324 (324)
T cd08244         310 ALEARSTVG-KVLLLP  324 (324)
T ss_pred             HHHcCCCCc-eEEEeC
Confidence            999999998 999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=5.1e-40  Score=305.88  Aligned_cols=317  Identities=22%  Similarity=0.267  Sum_probs=261.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++++.. +++++.|.|.+++++|+|||.++++|++|+....|..+.....|.++|||++|+|+++  +++.+
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~   77 (325)
T cd05280           1 FKALVVEEQDGGVS-LFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRF   77 (325)
T ss_pred             CceEEEcccCCCCc-ceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCC
Confidence            68999998886433 8999999999999999999999999999999998876554456889999999999999  56789


Q ss_pred             CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc--C-CCCEEEEeCCCc
Q 017064          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL--N-SGDSIVQNGATS  199 (378)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~g~~VlV~g~~g  199 (378)
                      ++||+|++...     ..|+|++|+++++++++++|+++++++++.+++.+.+||+++......  . .+++|+|+|++|
T Consensus        78 ~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g  157 (325)
T cd05280          78 REGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG  157 (325)
T ss_pred             CCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence            99999998631     248999999999999999999999999999999999999998765433  5 357999999999


Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~  279 (378)
                      ++|++++|+|+++|++|++++    .++++.+.++++|++++++.++.. ....+...+.+ +|++|||+|+..+..+++
T Consensus       158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~  231 (325)
T cd05280         158 GVGSIAVAILAKLGYTVVALT----GKEEQADYLKSLGASEVLDREDLL-DESKKPLLKAR-WAGAIDTVGGDVLANLLK  231 (325)
T ss_pred             HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCC-ccEEEECCchHHHHHHHH
Confidence            999999999999999998888    478888999999999998876532 23334444444 999999999988899999


Q ss_pred             hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 017064          280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT  359 (378)
Q Consensus       280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~  359 (378)
                      +++++|+++.+|.....+..+++..++.+++++.+......    .+....+.++.+.++++.+...+....|+++++++
T Consensus       232 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (325)
T cd05280         232 QTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC----PMELRKQVWQKLATEWKPDLLEIVVREISLEELPE  307 (325)
T ss_pred             hhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC----chhHHHHHHHHHHHHHhcCCccceeeEecHHHHHH
Confidence            99999999999965433334455555578999998765432    12334466777777778885555567899999999


Q ss_pred             HHHHHHccCCCCCceEeeC
Q 017064          360 ALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       360 a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++.+.+++..| |+|+++
T Consensus       308 a~~~~~~~~~~g-k~vv~~  325 (325)
T cd05280         308 AIDRLLAGKHRG-RTVVKI  325 (325)
T ss_pred             HHHHHhcCCcce-EEEEeC
Confidence            999999999998 999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.8e-40  Score=310.90  Aligned_cols=311  Identities=25%  Similarity=0.358  Sum_probs=258.3

Q ss_pred             cceEEEcccCCCccceEEee-eCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-------------------CCCCCc
Q 017064           48 SKAVVYEREGPPDSVIKMIE-LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------------------RPKVPA  107 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~-~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~  107 (378)
                      ||++.+..++.+.. +.+.+ .+.|.+.+++|+|||.++++|++|+..+.|.++.                   ..++|.
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~   79 (350)
T cd08274           1 MRAVLLTGHGGLDK-LVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR   79 (350)
T ss_pred             CeEEEEeccCCccc-eeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence            67888877665543 55554 5777789999999999999999999988775431                   234688


Q ss_pred             cCCCceeEEEEEecCCCCCCCCCCEEeeCC------------------CCCcccccceeccCCceEEcCCCCCHhhhhhc
Q 017064          108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI  169 (378)
Q Consensus       108 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~  169 (378)
                      ++|||++|+|+++|++++.|++||+|++.+                  ...|+|++|++++.+.++++|+++++.+++++
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l  159 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF  159 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence            999999999999999999999999998842                  01489999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH
Q 017064          170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV  249 (378)
Q Consensus       170 ~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~  249 (378)
                      ++++.|||+++ ....+.+|++|||+|++|++|++++++|+++|++++++++    ++ +.+.++++|++.+++......
T Consensus       160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~----~~-~~~~~~~~g~~~~~~~~~~~~  233 (350)
T cd08274         160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG----AA-KEEAVRALGADTVILRDAPLL  233 (350)
T ss_pred             ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC----ch-hhHHHHhcCCeEEEeCCCccH
Confidence            99999999998 5588999999999999999999999999999999988873    33 778888999987766555444


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC  329 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (378)
                      .+ .+.+.+.+ +|++|||+|+.....++++++++|+++.+|........++...++.+++++.++...          .
T Consensus       234 ~~-~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~  301 (350)
T cd08274         234 AD-AKALGGEP-VDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG----------T  301 (350)
T ss_pred             HH-HHhhCCCC-CcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC----------C
Confidence            44 55666655 999999999988899999999999999998553322445666667899999987653          2


Q ss_pred             HHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          330 RNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       330 ~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+.++++++++.++.+++. ++.|++++++++++.+..++..+ |+|+++
T Consensus       302 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvvi~~  350 (350)
T cd08274         302 REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVG-KLVLVP  350 (350)
T ss_pred             HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCce-EEEEeC
Confidence            3568889999999998865 56899999999999999888888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=5.1e-40  Score=306.32  Aligned_cols=322  Identities=23%  Similarity=0.276  Sum_probs=265.3

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +|+++.+.+++.+.. +++.+.+.|.++++||+|||.++|+|++|+....|.++.. .+|..+|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~   78 (327)
T PRK10754          1 MAKRIEFHKHGGPEV-LQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKH   78 (327)
T ss_pred             CceEEEEeccCChhH-eEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCC
Confidence            589999998887754 9999999999999999999999999999999888776532 35788999999999999999999


Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av  206 (378)
                      +++||+|++.....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++...+.+.+|++|+|+|++|.+|++++
T Consensus        79 ~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~  158 (327)
T PRK10754         79 IKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC  158 (327)
T ss_pred             CCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHH
Confidence            99999998764445899999999999999999999999999999999999999988788999999999999899999999


Q ss_pred             HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                      ++|+++|+++++++    .++++.+.++++|++++++.+..+ .+.++..+++.+ +|++|||+|+.....++++++++|
T Consensus       159 ~lak~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g  233 (327)
T PRK10754        159 QWAKALGAKLIGTV----GSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKK-VRVVYDSVGKDTWEASLDCLQRRG  233 (327)
T ss_pred             HHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCC-eEEEEECCcHHHHHHHHHHhccCC
Confidence            99999999999888    478888889999999999877654 356777777766 999999999988889999999999


Q ss_pred             EEEEEecCCCCCccccchhhhhcCceEEE-EechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHH
Q 017064          286 TMVTYGGMSKKPITVSTSAFIFKDLSLKG-FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTAL  361 (378)
Q Consensus       286 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~  361 (378)
                      +++.+|........++...+..++..+.. ......  ...+....+.+.++++++++|.+++.   ++.|+++++++++
T Consensus       234 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~  311 (327)
T PRK10754        234 LMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY--ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAH  311 (327)
T ss_pred             EEEEEccCCCCCCCcCHHHHhccCceEEecceeecc--cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHH
Confidence            99999855432222233232222221111 111111  11344556678889999999999853   5789999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      +.+.+++..+ |+|++.
T Consensus       312 ~~~~~~~~~~-~~~~~~  327 (327)
T PRK10754        312 EILESRATQG-SSLLIP  327 (327)
T ss_pred             HHHHcCCCcc-eEEEeC
Confidence            9999999998 999863

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=8.2e-40  Score=304.23  Aligned_cols=308  Identities=39%  Similarity=0.622  Sum_probs=266.8

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcc
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT  142 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~  142 (378)
                      +++.+.+.|.+.+++|+|||.++++|+.|...+.|..+..+..|.++|||++|+|+.+|++++.+++||+|++... .|+
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g~   92 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-EGT   92 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC-CCc
Confidence            7788888889999999999999999999999888766544456789999999999999999999999999999862 389


Q ss_pred             cccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       143 ~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      |++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+.+|++|||+|++|.+|++++++|+++|+++++++  
T Consensus        93 ~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~--  170 (323)
T cd05282          93 WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVV--  170 (323)
T ss_pred             ceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe--
Confidence            999999999999999999999999999999999999998888899999999999999999999999999999999988  


Q ss_pred             CCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcccc
Q 017064          223 RAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS  301 (378)
Q Consensus       223 ~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  301 (378)
                        .++++.+.++++|++++++++.. ....+.+.+++.+ +|+++||+|+.....++++++++|+++.+|........++
T Consensus       171 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~  247 (323)
T cd05282         171 --RRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAG-ARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFP  247 (323)
T ss_pred             --cChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCC-ceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCC
Confidence              46778888899999999988764 4466777877766 9999999999888889999999999999986544333445


Q ss_pred             chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          302 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      ...+..+++++.++....+....++....+.+++++++++++.+.+. .+.|++++++++++.+.+++..+ |+|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~  323 (323)
T cd05282         248 RSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGG-KVLLT  323 (323)
T ss_pred             HHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCc-eEeeC
Confidence            55555589999998877664332566777889999999999998865 56899999999999999988888 99874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.5e-40  Score=307.20  Aligned_cols=316  Identities=23%  Similarity=0.295  Sum_probs=255.2

Q ss_pred             ceEEEccc---CCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           49 KAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        49 ~a~~~~~~---~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      |++++..+   +++.. ++..+.|.|.++++||+|||.++++|++|.....|..+.. .+|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~vG~~v~   78 (336)
T TIGR02817         1 KAVGYKKPLPITDPDA-LVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQPKILGWDAAGVVVAVGDEVT   78 (336)
T ss_pred             CceeeccccCCCCccc-ceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC-CCCcccceeeEEEEEEeCCCCC
Confidence            46666665   55544 8889999999999999999999999999999887765432 4678999999999999999999


Q ss_pred             CCCCCCEEeeCC--CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC-----CCEEEEeCCC
Q 017064          126 RLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT  198 (378)
Q Consensus       126 ~~~~Gd~V~~~~--~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlV~g~~  198 (378)
                      .|++||+|++..  ...|+|++|++++.+.++++|+++++++++.++++++|||+++....++.+     |++|||+|++
T Consensus        79 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~  158 (336)
T TIGR02817        79 LFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGA  158 (336)
T ss_pred             CCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCC
Confidence            999999999874  225899999999999999999999999999999999999999988788887     9999999999


Q ss_pred             chHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC-ccHHH
Q 017064          199 SIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK  276 (378)
Q Consensus       199 g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~  276 (378)
                      |++|++++|+|+++ |++|++++    .++++.+.++++|+++++++.......+++. .+.+ +|+++|++++ .....
T Consensus       159 g~vg~~~~~~ak~~~G~~vi~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~-vd~vl~~~~~~~~~~~  232 (336)
T TIGR02817       159 GGVGSILIQLARQLTGLTVIATA----SRPESQEWVLELGAHHVIDHSKPLKAQLEKL-GLEA-VSYVFSLTHTDQHFKE  232 (336)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEc----CcHHHHHHHHHcCCCEEEECCCCHHHHHHHh-cCCC-CCEEEEcCCcHHHHHH
Confidence            99999999999998 99999998    5778889999999999998655444556664 4434 9999999864 66789


Q ss_pred             HHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH--HHHHHHHHHHHHcCCccccc-eee-
Q 017064          277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC--RNMIDYLLCLAREGKLKYDM-ELV-  352 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~-~~~-  352 (378)
                      ++++++++|+++.++..    ..++...+..+++++.+..+........+...  ...++++++++.++.+++.+ ..| 
T Consensus       233 ~~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~  308 (336)
T TIGR02817       233 IVELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFG  308 (336)
T ss_pred             HHHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccC
Confidence            99999999999987521    23344445556677776443210011112222  26788999999999998653 344 


Q ss_pred             --ccccHHHHHHHHHccCCCCCceEee
Q 017064          353 --PFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       353 --~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                        +++++++|++.+.+++..| |+|++
T Consensus       309 ~~~~~~~~~a~~~~~~~~~~g-kvvv~  334 (336)
T TIGR02817       309 TINAANLKRAHALIESGKARG-KIVLE  334 (336)
T ss_pred             CCCHHHHHHHHHHHHcCCccc-eEEEe
Confidence              4789999999999999988 98875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=6.7e-40  Score=313.14  Aligned_cols=319  Identities=21%  Similarity=0.271  Sum_probs=263.9

Q ss_pred             CCcccceEEEcc--cCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--------CC-CCC-ccCCC
Q 017064           44 MSPPSKAVVYER--EGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RP-KVP-AVGGY  111 (378)
Q Consensus        44 ~~~~~~a~~~~~--~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~-~~p-~~~G~  111 (378)
                      +|.+||++++..  .+++.+.+.+.+.+.|.+++++|+||+.++++|++|.....+....        .+ ..| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            567899999965  6665445899999999999999999999999999998776553210        00 123 37999


Q ss_pred             ceeEEEEEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHh
Q 017064          112 EGVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPME  164 (378)
Q Consensus       112 e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~  164 (378)
                      |++|+|+++|++++.+++||+|++...                           ..|+|++|+.++.++++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            999999999999999999999988642                           24899999999999999999999999


Q ss_pred             hhhhccccHHHHHHHHHH--HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          165 YAATIIVNPLTALRMLED--FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       165 ~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      +++.+++.+.+||+++..  .+++.+|++|+|+|++|++|++++++|+++|+++++++    .++++.+.++++|++.++
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~----~~~~~~~~~~~~g~~~~v  239 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVV----SSPEKAEYCRELGAEAVI  239 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCCEEe
Confidence            999999999999999865  46789999999999999999999999999999998877    467888999999999999


Q ss_pred             ccCcc-----------------------cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcc
Q 017064          243 TESQL-----------------------EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT  299 (378)
Q Consensus       243 ~~~~~-----------------------~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  299 (378)
                      |.++.                       +...+.+++++.+ +|++|||+|...+..++++++++|+++.+|.....+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  318 (398)
T TIGR01751       240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGED-PDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD  318 (398)
T ss_pred             cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence            86542                       1234666676655 99999999987788999999999999999976554445


Q ss_pred             ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++...++.++.++.++....+          +.+++++++++++.+++. .++|++++++++++.+.+++..| |+|+++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvv~~  387 (398)
T TIGR01751       319 YDNRYLWMRQKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQG-NVAVLV  387 (398)
T ss_pred             cCHHHHhhcccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCc-eEEEEe
Confidence            555666677877777654321          346778899999998865 46899999999999999999998 999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.1e-39  Score=302.76  Aligned_cols=312  Identities=27%  Similarity=0.373  Sum_probs=265.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++ +.. +++.+++.|.+.++||+||+.++++|++|.....|..+...+.|..+|||++|+|+++|+++..+
T Consensus         1 m~a~~~~~~~-~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFG-EKP-YEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccC-CCC-ceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCC
Confidence            7899998777 222 88999999999999999999999999999998888765433457789999999999999999999


Q ss_pred             CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++.+.                           ..|+|++|+.++++.++++|+++++.+++.++..+.|||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~  158 (341)
T cd08297          79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL  158 (341)
T ss_pred             CCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence            99999987520                           148899999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~  259 (378)
                      .. .+++++++|||+|+++++|++++++|+++|++|++++    .++++.+.++++|+++++++.+. +...+.+.+++.
T Consensus       159 ~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  233 (341)
T cd08297         159 KK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAID----VGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGG  233 (341)
T ss_pred             Hh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCC
Confidence            77 5899999999999988899999999999999999998    57788888899999999988764 346677777665


Q ss_pred             CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      + +|+++|+.+. .....++++++++|+++.+|.......+++...+..+++++.+....          ..+.++++++
T Consensus       234 ~-vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  302 (341)
T cd08297         234 G-AHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG----------TRQDLQEALE  302 (341)
T ss_pred             C-CCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC----------CHHHHHHHHH
Confidence            5 9999997664 66688999999999999998654333345555566788888875432          1366888999


Q ss_pred             HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++.+++.++.|++++++++++.+..++..| |+|+++
T Consensus       303 ~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvi~~  341 (341)
T cd08297         303 FAARGKVKPHIQVVPLEDLNEVFEKMEEGKIAG-RVVVDF  341 (341)
T ss_pred             HHHcCCCcceeEEEcHHHHHHHHHHHHcCCccc-eEEEeC
Confidence            999999987777899999999999999999888 999975

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2.1e-39  Score=306.36  Aligned_cols=311  Identities=25%  Similarity=0.341  Sum_probs=258.8

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++..++.+   +++++.+.|.+.++||+|||.++++|++|+....|.++.  .+|.++|||++|+|+++|+++.+
T Consensus         2 ~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           2 KTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             ccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCccc
Confidence            6899999886654   778899999999999999999999999999999887652  46889999999999999999999


Q ss_pred             CCCCCEEeeCC------------------------------------------------CCCcccccceeccCCceEEcC
Q 017064          127 LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHKVS  158 (378)
Q Consensus       127 ~~~Gd~V~~~~------------------------------------------------~~~G~~~~~~~~~~~~~~~iP  158 (378)
                      +++||+|++..                                                ...|+|++|+++++++++++|
T Consensus        77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP  156 (365)
T cd08278          77 LKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD  156 (365)
T ss_pred             CCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence            99999998521                                                013789999999999999999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      +++++++++.+++++.|||+++...+.+++|++|||+|+ |++|++++|+|+++|++++++++   .++++.+.++++|+
T Consensus       157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~---~~~~k~~~~~~~g~  232 (365)
T cd08278         157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVD---IVDSRLELAKELGA  232 (365)
T ss_pred             CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHcCC
Confidence            999999999999999999999988889999999999976 99999999999999996444443   47888889999999


Q ss_pred             cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCC-CCCccccchhhhhcCceEEEE
Q 017064          239 DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       239 ~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      +.++++++.+ .+.+.+.+ +.+ +|+++||+|. ..+..++++++++|+++.+|... .....++...++.+++++.++
T Consensus       233 ~~~i~~~~~~~~~~v~~~~-~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (365)
T cd08278         233 THVINPKEEDLVAAIREIT-GGG-VDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV  310 (365)
T ss_pred             cEEecCCCcCHHHHHHHHh-CCC-CcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence            9999887654 45677777 545 9999999986 56689999999999999998543 223445656666789999887


Q ss_pred             echhhhccccHHHHHHHHHHHHHHHHcCCccc--cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKY--DMELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .....    .   ..+.+++++++++++.+++  .+..|+++++++|++.+.+++..  |+||+
T Consensus       311 ~~~~~----~---~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~--k~~~~  365 (365)
T cd08278         311 IEGDS----V---PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI--KPVLR  365 (365)
T ss_pred             ecCCc----C---hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce--EEEEC
Confidence            64321    1   1356788899999999865  24679999999999999877653  88875

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=3.4e-39  Score=300.27  Aligned_cols=315  Identities=23%  Similarity=0.260  Sum_probs=259.2

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++++...+.+. +++++++|.|.+++++|+|||.++++|++|+..+.|.++.....|..+|||++|+|+.  .++..|+
T Consensus         1 ~a~~~~~~~~~~-~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   77 (323)
T TIGR02823         1 KALVVEKEDGKV-SAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFR   77 (323)
T ss_pred             CeEEEccCCCCc-ceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCC
Confidence            577888877765 4899999999999999999999999999999988887643334688899999999998  5677899


Q ss_pred             CCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHh--ccCCCC-EEEEeCCCch
Q 017064          129 PGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSGD-SIVQNGATSI  200 (378)
Q Consensus       129 ~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~~g~-~VlV~g~~g~  200 (378)
                      +||+|++...     ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++....  .+.+|+ +|+|+|++|.
T Consensus        78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~  157 (323)
T TIGR02823        78 EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGG  157 (323)
T ss_pred             CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcH
Confidence            9999998751     2589999999999999999999999999999999999988875443  388898 9999999999


Q ss_pred             HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHh
Q 017064          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (378)
Q Consensus       201 ~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~  280 (378)
                      +|++++++|+++|+++++++    .++++.+.++++|++++++.++... .++.+.++  ++|+++||+|+..+..++++
T Consensus       158 vg~~~~~la~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~d~vld~~g~~~~~~~~~~  230 (323)
T TIGR02823       158 VGSLAVAILSKLGYEVVAST----GKAEEEDYLKELGASEVIDREDLSP-PGKPLEKE--RWAGAVDTVGGHTLANVLAQ  230 (323)
T ss_pred             HHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHhcCCcEEEccccHHH-HHHHhcCC--CceEEEECccHHHHHHHHHH
Confidence            99999999999999999888    4677778889999999988765332 34444444  39999999999888999999


Q ss_pred             cccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHHH
Q 017064          281 LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA  360 (378)
Q Consensus       281 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a  360 (378)
                      ++++|+++.+|.......+.+...++.+++++.+......    ........++.+.+++..+.++..++.|+++++++|
T Consensus       231 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a  306 (323)
T TIGR02823       231 LKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYC----PMALREAAWQRLATDLKPRNLESITREITLEELPEA  306 (323)
T ss_pred             hCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecccc----CchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHH
Confidence            9999999999965433333444556678999998764321    112334567778888888888766678999999999


Q ss_pred             HHHHHccCCCCCceEeeC
Q 017064          361 LSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       361 ~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.+.+++..+ |+|+++
T Consensus       307 ~~~~~~~~~~~-k~vv~~  323 (323)
T TIGR02823       307 LEQILAGQHRG-RTVVDV  323 (323)
T ss_pred             HHHHhCCCccc-eEEEeC
Confidence            99999999988 999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.8e-39  Score=300.29  Aligned_cols=317  Identities=21%  Similarity=0.236  Sum_probs=250.6

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++++. ++.+++.+.|.++++||+||+.++++|++|.....+.......+|.++|||++|+|++.|  +..+
T Consensus         1 ~~a~~~~~~~~~~-~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~   77 (326)
T cd08289           1 FQALVVEKDEDDV-SVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRF   77 (326)
T ss_pred             CeeEEEeccCCcc-eeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCC
Confidence            6899999887754 488999999999999999999999999999876543221122457899999999999954  5789


Q ss_pred             CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhc---cCCCCEEEEeCCCc
Q 017064          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATS  199 (378)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlV~g~~g  199 (378)
                      ++||+|++...     ..|+|++|+.++++.++++|+++++++++.+++++.|||+++....+   ...+++|||+|++|
T Consensus        78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g  157 (326)
T cd08289          78 KPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATG  157 (326)
T ss_pred             CCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCc
Confidence            99999998751     25899999999999999999999999999999999999988865332   34578999999999


Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~  279 (378)
                      ++|++++|+|+++|++|++++    .++++.+.++++|++++++.++...+.+.+.. +. ++|++|||+|+..+..+++
T Consensus       158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~-~~d~vld~~g~~~~~~~~~  231 (326)
T cd08289         158 GVGSLAVSILAKLGYEVVAST----GKADAADYLKKLGAKEVIPREELQEESIKPLE-KQ-RWAGAVDPVGGKTLAYLLS  231 (326)
T ss_pred             hHHHHHHHHHHHCCCeEEEEe----cCHHHHHHHHHcCCCEEEcchhHHHHHHHhhc-cC-CcCEEEECCcHHHHHHHHH
Confidence            999999999999999999888    47888999999999999987765444555553 33 4999999999988899999


Q ss_pred             hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC-CccccceeeccccHH
Q 017064          280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG-KLKYDMELVPFNNFQ  358 (378)
Q Consensus       280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~~~~~~~~l~~~~  358 (378)
                      +++++|+++.+|.......+.++..++.+++++.++.....    ......+.+..+...+... ......+.|++++++
T Consensus       232 ~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  307 (326)
T cd08289         232 TLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVEC----PMELRRRIWRRLATDLKPTQLLNEIKQEITLDELP  307 (326)
T ss_pred             HhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEec----CchHHHHHHHHHHhhcCccccccccceEeeHHHHH
Confidence            99999999999965433344445666689999999753211    0111223444444444322 222346789999999


Q ss_pred             HHHHHHHccCCCCCceEeeC
Q 017064          359 TALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       359 ~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +||+.+.+++..| |+|+++
T Consensus       308 ~a~~~~~~~~~~g-kvvv~~  326 (326)
T cd08289         308 EALKQILQGRVTG-RTVVKL  326 (326)
T ss_pred             HHHHHHhcCcccc-eEEEeC
Confidence            9999999999998 999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=4.8e-39  Score=305.93  Aligned_cols=308  Identities=22%  Similarity=0.238  Sum_probs=256.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |+++++.+++.    +++.+++.|.+ ++++|+||+.++++|++|...+.|.++.. ++|.++|||++|+|+++|+++++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~   75 (386)
T cd08283           1 MKALVWHGKGD----VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRN   75 (386)
T ss_pred             CeeEEEecCCC----ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCC
Confidence            68899886543    88999999988 59999999999999999999999877653 56889999999999999999999


Q ss_pred             CCCCCEEeeCCC----------------------------------------------CCcccccceeccCC--ceEEcC
Q 017064          127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQS--VWHKVS  158 (378)
Q Consensus       127 ~~~Gd~V~~~~~----------------------------------------------~~G~~~~~~~~~~~--~~~~iP  158 (378)
                      +++||+|++.+.                                              ..|+|++|++++.+  .++++|
T Consensus        76 ~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp  155 (386)
T cd08283          76 LKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIP  155 (386)
T ss_pred             CCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECC
Confidence            999999987531                                              14889999999988  899999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCC
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      ++++++++++++..++|||+++ ..+.+.+|++|||+|+ |.+|++++++|+++|+. ++++.    .++++.+.+++++
T Consensus       156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~----~~~~~~~~~~~~~  229 (386)
T cd08283         156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAID----RVPERLEMARSHL  229 (386)
T ss_pred             CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcC
Confidence            9999999999999999999999 6689999999999976 99999999999999985 77776    4788999999885


Q ss_pred             CcEEEccCcc--cHHHHHHHhcCCCCCcEEEeCCCCc----------------------cHHHHHHhcccCCEEEEEecC
Q 017064          238 ADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------------SASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       238 a~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      ...++++...  ..+.+++++++.+ +|++|||+|+.                      .+..++++++++|+++.+|..
T Consensus       230 ~~~vi~~~~~~~~~~~l~~~~~~~~-~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~  308 (386)
T cd08283         230 GAETINFEEVDDVVEALRELTGGRG-PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVY  308 (386)
T ss_pred             CcEEEcCCcchHHHHHHHHHcCCCC-CCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCC
Confidence            4567776654  3456777777666 99999999853                      457889999999999999865


Q ss_pred             CCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCC-
Q 017064          294 SKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHG-  369 (378)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~-  369 (378)
                      ......++....+.+++++.+....          ..+.++++++++.++.+.+.   .+.|+++++++|++.+.+++. 
T Consensus       309 ~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~  378 (386)
T cd08283         309 GGTVNKFPIGAAMNKGLTLRMGQTH----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDG  378 (386)
T ss_pred             CCCcCccCHHHHHhCCcEEEeccCC----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCC
Confidence            4433334544567889998886421          23567888999999998863   467999999999999988874 


Q ss_pred             CCCceEeeC
Q 017064          370 SQPKQVIKF  378 (378)
Q Consensus       370 ~g~kvvv~~  378 (378)
                      .+ |+||+.
T Consensus       379 ~~-k~~~~~  386 (386)
T cd08283         379 CI-KVVLKP  386 (386)
T ss_pred             eE-EEEecC
Confidence            45 999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.3e-40  Score=301.66  Aligned_cols=322  Identities=27%  Similarity=0.343  Sum_probs=248.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC---CCCccCCCc---eeEEEEEec
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---KVPAVGGYE---GVGEVYSVG  121 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e---~~G~V~~vG  121 (378)
                      +....+..+.+..++...++.+.|.+.+++++|++.++++|+.|+.+..|.+...+   .+|.+++++   .+|.+...|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g   84 (347)
T KOG1198|consen    5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVG   84 (347)
T ss_pred             cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccc
Confidence            34555555555555577788999999999999999999999999999999887765   677444444   445555556


Q ss_pred             -CCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHh------ccCCCCEEEE
Q 017064          122 -SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT------TLNSGDSIVQ  194 (378)
Q Consensus       122 -~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g~~VlV  194 (378)
                       ..+..+..||.+..... .|+|+||.++|...++++|+++++.+||++|++++|||.++.+.+      ++++|++|||
T Consensus        85 ~~~~~~~~~g~~~~~~~~-~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv  163 (347)
T KOG1198|consen   85 DDVVGGWVHGDAVVAFLS-SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV  163 (347)
T ss_pred             cccccceEeeeEEeeccC-CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE
Confidence             44556888888777665 599999999999999999999999999999999999999999988      8999999999


Q ss_pred             eCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCcc
Q 017064          195 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNS  273 (378)
Q Consensus       195 ~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~  273 (378)
                      +||+|++|++|+|+|++.|+.+++++    .++++.++++++|+|+++|+++.+. +.+++.+ +. ++|+||||+|+..
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~----~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~-~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTA----CSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GK-GVDVVLDCVGGST  237 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEE----cccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CC-CccEEEECCCCCc
Confidence            99999999999999999995444444    3888999999999999999999764 5677777 44 4999999999998


Q ss_pred             HHHHHHhcccCCEEEEEecCCCCCccccchhhh--hcCceEEE--EechhhhccccHHHHHHHHHHHHHHHHcCCccccc
Q 017064          274 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFI--FKDLSLKG--FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM  349 (378)
Q Consensus       274 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  349 (378)
                      ...+..++..+|+...++.......+.......  .+.+.+..  ....++ .........+.++.+.++++.|++++.+
T Consensus       238 ~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~ie~gkikp~i  316 (347)
T KOG1198|consen  238 LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNY-RWLYFVPSAEYLKALVELIEKGKIKPVI  316 (347)
T ss_pred             cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccce-eeeeecCCHHHHHHHHHHHHcCcccCCc
Confidence            888888999888765665333222111111000  11111111  111111 1112233457788999999999999986


Q ss_pred             -eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          350 -ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       350 -~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       +.||++++.+|++++.+++..| |+++++
T Consensus       317 ~~~~p~~~~~ea~~~~~~~~~~G-K~vl~~  345 (347)
T KOG1198|consen  317 DSVYPFSQAKEAFEKLEKSHATG-KVVLEK  345 (347)
T ss_pred             ceeeeHHHHHHHHHHHhhcCCcc-eEEEEe
Confidence             4799999999999999999999 999874

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=9.4e-39  Score=298.01  Aligned_cols=313  Identities=27%  Similarity=0.349  Sum_probs=261.9

Q ss_pred             ccceEEEcccCC--CccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           47 PSKAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        47 ~~~a~~~~~~~~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      .||++++..+++  +. .+++++.+.|.+.++||+|||.++|+|++|+....|.++....+|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v   79 (329)
T cd08250           1 SFRKLVVHRLSPNFRE-ATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV   79 (329)
T ss_pred             CceEEEeccCCCCccc-CceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCC
Confidence            379999998877  44 488999999999999999999999999999998888765444578899999999999999999


Q ss_pred             CCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064          125 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~  204 (378)
                      +.+++||+|++...  |+|++|++++.+.++++|++  +.+++.+++++.|||+++.....+.+|++|+|+|++|.+|++
T Consensus        80 ~~~~~Gd~V~~~~~--g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~  155 (329)
T cd08250          80 TDFKVGDAVATMSF--GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQF  155 (329)
T ss_pred             CCCCCCCEEEEecC--cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHH
Confidence            99999999998754  89999999999999999997  356788888999999999887889999999999999999999


Q ss_pred             HHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064          205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ  283 (378)
Q Consensus       205 av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~  283 (378)
                      ++++|++.|+++++++    .++++.+.++++|++.+++.+.... ..+....+ .+ +|++||++|+.....+++++++
T Consensus       156 ~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~-vd~v~~~~g~~~~~~~~~~l~~  229 (329)
T cd08250         156 AVQLAKLAGCHVIGTC----SSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KG-VDVVYESVGGEMFDTCVDNLAL  229 (329)
T ss_pred             HHHHHHHcCCeEEEEe----CcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CC-CeEEEECCcHHHHHHHHHHhcc
Confidence            9999999999999888    4677888889999999987766543 34444443 34 9999999998888899999999


Q ss_pred             CCEEEEEecCCCCC----------ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ce
Q 017064          284 GGTMVTYGGMSKKP----------ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---ME  350 (378)
Q Consensus       284 ~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~  350 (378)
                      +|+++.+|......          ..+ ....+.+++++.++....+.     ....+.+.+++++++++.+++.   .+
T Consensus       230 ~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~  303 (329)
T cd08250         230 KGRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYA-----KLIPQHLDRLLQLYQRGKLVCEVDPTR  303 (329)
T ss_pred             CCeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHH-----HHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence            99999998654321          111 23456788999998764331     1245678889999999998873   34


Q ss_pred             eeccccHHHHHHHHHccCCCCCceEee
Q 017064          351 LVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .|+++++++|++.+.+++..+ |+|++
T Consensus       304 ~~~~~~~~~a~~~~~~~~~~~-kvvv~  329 (329)
T cd08250         304 FRGLESVADAVDYLYSGKNIG-KVVVE  329 (329)
T ss_pred             ccCHHHHHHHHHHHHcCCCCc-eEEeC
Confidence            699999999999999988888 99875

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.5e-39  Score=302.22  Aligned_cols=309  Identities=22%  Similarity=0.233  Sum_probs=251.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.++++    +.+.+.+.|.+.++||+|||.++++|++|+..+.+.++. ...|.++|||++|+|+++|++++++
T Consensus         1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~   75 (351)
T cd08285           1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDF   75 (351)
T ss_pred             CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCcc
Confidence            78999988775    678899989999999999999999999999988776543 2458899999999999999999999


Q ss_pred             CCCCEEeeCCC-----------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHH
Q 017064          128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      ++||+|++.+.                             ..|+|++|++++.+  .++++|+++++++++.++..++||
T Consensus        76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta  155 (351)
T cd08285          76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG  155 (351)
T ss_pred             CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence            99999997431                             24899999999974  899999999999999999999999


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG  254 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~  254 (378)
                      |+++ ..+.+++|++|||+|+ |++|++++|+|+++|++ ++++.    .++++.+.++++|+++++++.+.+ .+.+.+
T Consensus       156 ~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~  229 (351)
T cd08285         156 FHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVG----SRPNRVELAKEYGATDIVDYKNGDVVEQILK  229 (351)
T ss_pred             HHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCceEecCCCCCHHHHHHH
Confidence            9997 4588999999999975 99999999999999996 55554    467888999999999999887644 456777


Q ss_pred             HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-Cccccc--hhhhhcCceEEEEechhhhccccHHHHH
Q 017064          255 LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVST--SAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      ++++.+ +|+++||+|+ ..+..++++++++|+++.+|..... ...++.  .....+..++.+.....         ..
T Consensus       230 ~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~  299 (351)
T cd08285         230 LTGGKG-VDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG---------GR  299 (351)
T ss_pred             HhCCCC-CcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC---------cc
Confidence            776655 9999999997 4668999999999999999865432 122221  11223455555443210         12


Q ss_pred             HHHHHHHHHHHcCCccc---cce-eeccccHHHHHHHHHccCC-CCCceEeeC
Q 017064          331 NMIDYLLCLAREGKLKY---DME-LVPFNNFQTALSKALGLHG-SQPKQVIKF  378 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~---~~~-~~~l~~~~~a~~~~~~~~~-~g~kvvv~~  378 (378)
                      +.++++++++++|++++   .++ .|+++++++|++.+++++. .+ |++|++
T Consensus       300 ~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~-k~~~~~  351 (351)
T cd08285         300 LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLI-KPVIIF  351 (351)
T ss_pred             ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeE-EEEEeC
Confidence            55788899999999998   233 5999999999999999885 45 999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.2e-39  Score=303.59  Aligned_cols=309  Identities=22%  Similarity=0.299  Sum_probs=260.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC-
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR-  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-  126 (378)
                      ||++++..++.+   +.+.+.|.|.+.++||+|++.++++|++|+....+.++.  .+|.++|||++|+|+.+|+++.+ 
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~   75 (367)
T cd08263           1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENP   75 (367)
T ss_pred             CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCC
Confidence            689999888654   778889999999999999999999999999988886654  46789999999999999999988 


Q ss_pred             --CCCCCEEeeCC------------------------------------------------CCCcccccceeccCCceEE
Q 017064          127 --LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       127 --~~~Gd~V~~~~------------------------------------------------~~~G~~~~~~~~~~~~~~~  156 (378)
                        |++||+|++.+                                                ...|+|++|+.++.+.+++
T Consensus        76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  155 (367)
T cd08263          76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP  155 (367)
T ss_pred             CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence              99999999831                                                1248899999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHh
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG  235 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~  235 (378)
                      +|+++++.+++.++++++|||+++.+.+.+.++++|||+| +|++|++++++|+++|++ ++++.    .++++.+.+++
T Consensus       156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~----~s~~~~~~~~~  230 (367)
T cd08263         156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVD----VRDEKLAKAKE  230 (367)
T ss_pred             CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHH
Confidence            9999999999999999999999998888889999999996 599999999999999998 76666    47788888899


Q ss_pred             CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceE
Q 017064          236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSL  312 (378)
Q Consensus       236 ~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~  312 (378)
                      +|++.+++.+..+ ...+++..++.+ +|++||++++. ....++++++++|+++.++..... ...++...++.+++++
T Consensus       231 ~g~~~v~~~~~~~~~~~l~~~~~~~~-~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  309 (367)
T cd08263         231 LGATHTVNAAKEDAVAAIREITGGRG-VDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKI  309 (367)
T ss_pred             hCCceEecCCcccHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEE
Confidence            9999999887644 456777776665 99999999997 778999999999999999854321 2334445555788888


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++...      .   ..+.++++++++.++.+++.   ++.|+++++.++++.+.+++..| |+||+
T Consensus       310 ~~~~~~------~---~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g-~~~~~  367 (367)
T cd08263         310 IGSYGA------R---PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHG-RAIVE  367 (367)
T ss_pred             EecCCC------C---cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccc-eeeeC
Confidence            774321      1   13568889999999998863   46799999999999999999888 99874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.1e-38  Score=292.41  Aligned_cols=302  Identities=25%  Similarity=0.334  Sum_probs=253.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+.+ +.. +++.+.+.|.++++||+||+.++++|+.|.....+.     ..|.++|||++|+|+++|+++..|
T Consensus         1 ~~~~~~~~~~-~~~-~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~   73 (305)
T cd08270           1 MRALVVDPDA-PLR-LRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGP   73 (305)
T ss_pred             CeEEEEccCC-Cce-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCC
Confidence            5888887765 443 888899999999999999999999999999876521     235789999999999999999999


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~  207 (378)
                      ++||+|+++.. .|+|++|++++.++++++|+++++++++++++.+.|||+++...... +|++|+|+|++|++|+++++
T Consensus        74 ~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~  151 (305)
T cd08270          74 AVGARVVGLGA-MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQ  151 (305)
T ss_pred             CCCCEEEEecC-CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHH
Confidence            99999998753 48999999999999999999999999999999999999999876555 59999999999999999999


Q ss_pred             HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM  287 (378)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~  287 (378)
                      +|++.|++++.++    .++++.+.++++|++.+++...       ++.++  ++|+++|++|+.....++++++++|++
T Consensus       152 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~-------~~~~~--~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         152 LAALAGAHVVAVV----GSPARAEGLRELGAAEVVVGGS-------ELSGA--PVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEeccc-------cccCC--CceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            9999999999888    4688899999999987664332       12222  499999999998889999999999999


Q ss_pred             EEEecCCCCCccccchhhhh--cCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHH
Q 017064          288 VTYGGMSKKPITVSTSAFIF--KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKA  364 (378)
Q Consensus       288 v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~  364 (378)
                      +.+|........++...+..  +++++.++.+..      +....+.++.++++++++++++. .+.+++++++++++.+
T Consensus       219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~  292 (305)
T cd08270         219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEAL  292 (305)
T ss_pred             EEEeccCCCcccccHHHHhcccccceEEEEEccC------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHH
Confidence            99996543233344444444  688888887542      23445778899999999999875 4679999999999999


Q ss_pred             HccCCCCCceEeeC
Q 017064          365 LGLHGSQPKQVIKF  378 (378)
Q Consensus       365 ~~~~~~g~kvvv~~  378 (378)
                      .+++..| |+|+++
T Consensus       293 ~~~~~~g-kvvi~~  305 (305)
T cd08270         293 LARRFRG-KAVLDV  305 (305)
T ss_pred             HcCCCCc-eEEEeC
Confidence            9999898 999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.7e-38  Score=298.51  Aligned_cols=308  Identities=26%  Similarity=0.288  Sum_probs=254.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++.+.+++.    +.+.+.|.|.+ .+++|+|||.++++|++|+....|.++. .++|.++|+|++|+|+++|+++++
T Consensus         1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   75 (347)
T cd05278           1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKR   75 (347)
T ss_pred             CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccc
Confidence            68888887665    78889999989 9999999999999999999998887764 356889999999999999999999


Q ss_pred             CCCCCEEeeCC-----------------------------CCCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHH
Q 017064          127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT  175 (378)
Q Consensus       127 ~~~Gd~V~~~~-----------------------------~~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~t  175 (378)
                      +++||+|++.+                             ...|+|++|++++++  +++++|+++++++++.++++++|
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t  155 (347)
T cd05278          76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT  155 (347)
T ss_pred             cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence            99999999732                             124899999999997  89999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~  253 (378)
                      ||+++ ...++++|++|||.|+ |++|++++|+|+++|+ +++++.    .++++.+.++++|++++++++..+ .+.++
T Consensus       156 a~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~  229 (347)
T cd05278         156 GFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVD----SNPERLDLAKEAGATDIINPKNGDIVEQIL  229 (347)
T ss_pred             eeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHhCCcEEEcCCcchHHHHHH
Confidence            99998 5688999999999875 9999999999999997 676664    467788888999999999887654 45577


Q ss_pred             HHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064          254 GLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM  332 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (378)
                      +.+++.+ +|++||++|+ ..+..++++++++|+++.+|..............+.+++++.+....          ..+.
T Consensus       230 ~~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  298 (347)
T cd05278         230 ELTGGRG-VDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP----------VRAR  298 (347)
T ss_pred             HHcCCCC-CcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccC----------chhH
Confidence            7776655 9999999998 57789999999999999998543321111222344677777775321          1457


Q ss_pred             HHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCC-CCCceEeeC
Q 017064          333 IDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHG-SQPKQVIKF  378 (378)
Q Consensus       333 ~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~-~g~kvvv~~  378 (378)
                      ++++++++.++.+++.   ...|++++++++++.+..++. .+ |+|+++
T Consensus       299 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~vv~~  347 (347)
T cd05278         299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCI-KVVIRP  347 (347)
T ss_pred             HHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCce-EEEecC
Confidence            8889999999999863   467999999999999988877 66 999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2.5e-38  Score=297.63  Aligned_cols=309  Identities=25%  Similarity=0.313  Sum_probs=257.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-----------CCCCCccCCCceeEE
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPAVGGYEGVGE  116 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~  116 (378)
                      ||++++..++.+   +++.+.|.|++.++||+||+.++++|++|+..+.|.++.           ..+.|.++|||++|+
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   77 (350)
T cd08240           1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE   77 (350)
T ss_pred             CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence            688888877764   778899999999999999999999999999998875432           123567899999999


Q ss_pred             EEEecCCCCCCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064          117 VYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (378)
Q Consensus       117 V~~vG~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~  170 (378)
                      |+++|++++.+++||+|++.+.                          ..|++++|+.++.+.++++|+++++.++++++
T Consensus        78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~  157 (350)
T cd08240          78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA  157 (350)
T ss_pred             EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence            9999999999999999998731                          24899999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-
Q 017064          171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-  248 (378)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-  248 (378)
                      +.++|||+++.....+.++++|+|+|+ |++|++++|+|++.|+ +|+++.    .++++.+.++++|++.+++.++.. 
T Consensus       158 ~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~  232 (350)
T cd08240         158 CSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVD----IDEAKLEAAKAAGADVVVNGSDPDA  232 (350)
T ss_pred             chhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCcEEecCCCccH
Confidence            999999999988777778999999975 9999999999999999 566665    478888899999999988876643 


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHH
Q 017064          249 VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT  327 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (378)
                      ...+.+..++ + +|++||++|. .....++++++++|+++.+|..... ...+......+++++.++.....       
T Consensus       233 ~~~~~~~~~~-~-~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~-------  302 (350)
T cd08240         233 AKRIIKAAGG-G-VDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL-------  302 (350)
T ss_pred             HHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH-------
Confidence            3556666666 4 9999999985 5678999999999999999855432 22333344558888887754321       


Q ss_pred             HHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          328 ECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       328 ~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         +.+..++++++++.+++. +..|+++++++|++.+.+++..| |+++++
T Consensus       303 ---~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~  350 (350)
T cd08240         303 ---EELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVG-RAVLKP  350 (350)
T ss_pred             ---HHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccc-eEEecC
Confidence               557788899999998864 56799999999999999999888 999863

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.9e-38  Score=295.63  Aligned_cols=302  Identities=23%  Similarity=0.289  Sum_probs=253.9

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++....++..   +++.+.+.|+++++||+|||.++++|++|+....|.... .++|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (337)
T cd05283           1 KGYAARDASGK---LEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFK   76 (337)
T ss_pred             CceEEecCCCC---ceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccC
Confidence            35666666643   899999999999999999999999999999998887643 24688999999999999999999999


Q ss_pred             CCCEEeeC----------------------------------CCCCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064          129 PGDWVIPS----------------------------------PPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       129 ~Gd~V~~~----------------------------------~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      +||+|+..                                  ....|+|++|+.++.++++++|+++++++++.+.+.+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~  156 (337)
T cd05283          77 VGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGI  156 (337)
T ss_pred             CCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHH
Confidence            99999731                                  02258999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      +||+++.+ ..+.+|++++|.|+ |++|++++++|++.|++++++.    .++++.+.++++|++.+++......  ...
T Consensus       157 ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~--~~~  228 (337)
T cd05283         157 TVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFS----RSPSKKEDALKLGADEFIATKDPEA--MKK  228 (337)
T ss_pred             HHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEecCcchhh--hhh
Confidence            99999877 56899999999875 9999999999999999988887    4677888889999999987765332  111


Q ss_pred             HhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064          255 LLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI  333 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (378)
                       . +. ++|++|||+|... ...++++++++|+++.+|.... ...++...++.+++++.++....          .+.+
T Consensus       229 -~-~~-~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------~~~~  294 (337)
T cd05283         229 -A-AG-SLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG----------RKET  294 (337)
T ss_pred             -c-cC-CceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC-CCccCHHHHhcCceEEEEecccC----------HHHH
Confidence             1 22 4999999999874 7899999999999999996543 22456666677999999986542          2457


Q ss_pred             HHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          334 DYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       334 ~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      +.+++++.++.+++.++.|+++++++||+.+.+++..| |+|++
T Consensus       295 ~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-k~v~~  337 (337)
T cd05283         295 QEMLDFAAEHGIKPWVEVIPMDGINEALERLEKGDVRY-RFVLD  337 (337)
T ss_pred             HHHHHHHHhCCCccceEEEEHHHHHHHHHHHHcCCCcc-eEeeC
Confidence            78889999999987778899999999999999999988 99874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3e-38  Score=295.85  Aligned_cols=304  Identities=22%  Similarity=0.244  Sum_probs=244.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.    +.+.+.+.|.++++||+||+.++++|++|+..+.|..+.. ++|.++|||++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~   75 (339)
T PRK10083          1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAA   75 (339)
T ss_pred             CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccC
Confidence            68888887664    8899999999999999999999999999999988876542 468999999999999999999999


Q ss_pred             CCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|+..+                          ...|+|++|+.++.++++++|+++++++++ +...+.++|+ +.
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~  153 (339)
T PRK10083         76 RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VT  153 (339)
T ss_pred             CCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HH
Confidence            9999998421                          114899999999999999999999998876 4456777885 44


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~  259 (378)
                      ...++++|++|+|+|+ |++|++++|+|++ +|++++++++   .++++.+.++++|+++++++++... +.+..  .+.
T Consensus       154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~---~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~  227 (339)
T PRK10083        154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVAD---RIDERLALAKESGADWVINNAQEPLGEALEE--KGI  227 (339)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence            5588999999999995 9999999999996 6998666554   4788899999999999998876433 23322  122


Q ss_pred             CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      + +|++||++|. ..+..++++++++|+++.+|.... ...++...+..+++++.+...           ..+.++++++
T Consensus       228 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  294 (339)
T PRK10083        228 K-PTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL-----------NANKFPVVID  294 (339)
T ss_pred             C-CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEec-----------ChhhHHHHHH
Confidence            2 6899999996 467899999999999999986532 333344444557777776532           1246788999


Q ss_pred             HHHcCCccc---cceeeccccHHHHHHHHHccC-CCCCceEeeC
Q 017064          339 LAREGKLKY---DMELVPFNNFQTALSKALGLH-GSQPKQVIKF  378 (378)
Q Consensus       339 ~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~-~~g~kvvv~~  378 (378)
                      ++++|.+++   ..+.|+++++++|++.+.+++ ..+ |+|++|
T Consensus       295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~-kvvv~~  337 (339)
T PRK10083        295 WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCC-KVLLTF  337 (339)
T ss_pred             HHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceE-EEEEec
Confidence            999999987   357899999999999998654 456 999875

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-38  Score=295.00  Aligned_cols=307  Identities=23%  Similarity=0.287  Sum_probs=260.6

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+   +.+.+.+.|.+.+++|+||+.++++|++|+....|..+.. .+|.++|+|++|+|+.+|+++..+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~~~~~   76 (345)
T cd08260           1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV-TLPHVPGHEFAGVVVEVGEDVSRW   76 (345)
T ss_pred             CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC-CCCeeeccceeEEEEEECCCCccC
Confidence            799999887765   7888999999999999999999999999999988865532 457899999999999999999999


Q ss_pred             CCCCEEee---------------------------CCCCCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHHHH
Q 017064          128 APGDWVIP---------------------------SPPSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALR  178 (378)
Q Consensus       128 ~~Gd~V~~---------------------------~~~~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta~~  178 (378)
                      ++||+|++                           +. ..|+|++|+.++..  +++++|+++++++++.+++.++|||+
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  155 (345)
T cd08260          77 RVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFR  155 (345)
T ss_pred             CCCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHH
Confidence            99999986                           21 15899999999975  89999999999999999999999999


Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHh
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLL  256 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~  256 (378)
                      ++...+++.++++|+|+| +|++|++++++|+++|+++++++    .++++.+.++++|++++++.+. . ....+.++.
T Consensus       156 ~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  230 (345)
T cd08260         156 ALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVD----IDDDKLELARELGAVATVNASEVEDVAAAVRDLT  230 (345)
T ss_pred             HHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHhCCCEEEccccchhHHHHHHHHh
Confidence            998778899999999999 59999999999999999999988    5788888889999999998876 3 345677777


Q ss_pred             cCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCC--ccccchhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064          257 ANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI  333 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (378)
                      .+ + +|++|||+|+ .....++++++++|+++.+|......  ..++...+..+++++.+....          ....+
T Consensus       231 ~~-~-~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  298 (345)
T cd08260         231 GG-G-AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM----------PAHRY  298 (345)
T ss_pred             CC-C-CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC----------CHHHH
Confidence            76 5 9999999995 56688999999999999998654332  234445555788888886542          12467


Q ss_pred             HHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          334 DYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       334 ~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      ++++++++++.+.+.   .+.++++++++|++.+++++..| |+|++
T Consensus       299 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~~  344 (345)
T cd08260         299 DAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAG-ITVIT  344 (345)
T ss_pred             HHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCc-eEEec
Confidence            788899999988763   46799999999999999999998 98874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.5e-38  Score=291.34  Aligned_cols=309  Identities=24%  Similarity=0.262  Sum_probs=254.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++.+...+.+.. +.+.+.+.|.++++||+||+.++++|+.|+....|..+.. ..|.++|||++|+|+++|.  ..+
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~--~~~   76 (320)
T cd08243           1 MKAIVIEQPGGPEV-LKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV-KFPRVLGIEAVGEVEEAPG--GTF   76 (320)
T ss_pred             CeEEEEcCCCCccc-eEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCccccceeEEEEEEecC--CCC
Confidence            57888877665433 7778888888999999999999999999999888765432 4578899999999999995  579


Q ss_pred             CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (378)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G  202 (378)
                      ++||+|++...     ..|+|++|+.++++.++++|+++++++++.+++++.|||+++.....+.+|++|||+|++|++|
T Consensus        77 ~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g  156 (320)
T cd08243          77 TPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVG  156 (320)
T ss_pred             CCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHH
Confidence            99999998752     2489999999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      ++++|+|+++|++|++++    .++++.+.++++|++++++......+.+++.  +.+ +|+++||+|+..+..++++++
T Consensus       157 ~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~-~d~vl~~~~~~~~~~~~~~l~  229 (320)
T cd08243         157 LAALKLAKALGATVTATT----RSPERAALLKELGADEVVIDDGAIAEQLRAA--PGG-FDKVLELVGTATLKDSLRHLR  229 (320)
T ss_pred             HHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEecCccHHHHHHHh--CCC-ceEEEECCChHHHHHHHHHhc
Confidence            999999999999999888    4778888899999999886543344566666  434 999999999988899999999


Q ss_pred             cCCEEEEEecCCCCCc--cccchhh--hhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccH
Q 017064          283 QGGTMVTYGGMSKKPI--TVSTSAF--IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNF  357 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~  357 (378)
                      ++|+++.+|.......  .......  +.+++++.++.....        ....++.++++++.+.+++. +..|+++++
T Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  301 (320)
T cd08243         230 PGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV--------PQTPLQELFDFVAAGHLDIPPSKVFTFDEI  301 (320)
T ss_pred             cCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh--------hHHHHHHHHHHHHCCceecccccEEcHHHH
Confidence            9999999985432211  1111222  357777777654322        23568888999999998864 568999999


Q ss_pred             HHHHHHHHccCCCCCceEe
Q 017064          358 QTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       358 ~~a~~~~~~~~~~g~kvvv  376 (378)
                      ++|++.+.+++..+ |+|+
T Consensus       302 ~~a~~~~~~~~~~~-kvvv  319 (320)
T cd08243         302 VEAHAYMESNRAFG-KVVV  319 (320)
T ss_pred             HHHHHHHHhCCCCC-cEEe
Confidence            99999999888888 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.8e-38  Score=297.68  Aligned_cols=309  Identities=27%  Similarity=0.356  Sum_probs=258.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+   +++.+++.|.+++++|+|+|.++++|+.|+....|.++.  .+|.++|+|++|+|+.+|+++..+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (363)
T cd08279           1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGV   75 (363)
T ss_pred             CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCcccc
Confidence            689999988754   788999999999999999999999999999988887653  467899999999999999999999


Q ss_pred             CCCCEEeeCC----------------------------------------------CCCcccccceeccCCceEEcCCCC
Q 017064          128 APGDWVIPSP----------------------------------------------PSSGTWQSYVVKDQSVWHKVSKDS  161 (378)
Q Consensus       128 ~~Gd~V~~~~----------------------------------------------~~~G~~~~~~~~~~~~~~~iP~~~  161 (378)
                      ++||+|++.+                                              ...|+|++|+.++++.++++|+++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~  155 (363)
T cd08279          76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI  155 (363)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence            9999999842                                              124899999999999999999999


Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      ++++++.+++++.+||+++....++.+|++|||+|+ |++|++++++|+++|++ +++++    .++++.+.++++|+++
T Consensus       156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~----~~~~~~~~~~~~g~~~  230 (363)
T cd08279         156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVD----PVPEKLELARRFGATH  230 (363)
T ss_pred             ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHHHhCCeE
Confidence            999999999999999999988889999999999965 99999999999999997 77776    4778888889999999


Q ss_pred             EEccCcc-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEec
Q 017064          241 VFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       241 vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +++.+.. ...++.+++.+.+ +|+++|++++ .....++++++++|+++.++.... ....++...+..++..+.++.+
T Consensus       231 vv~~~~~~~~~~l~~~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (363)
T cd08279         231 TVNASEDDAVEAVRDLTDGRG-ADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLY  309 (363)
T ss_pred             EeCCCCccHHHHHHHHcCCCC-CCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEe
Confidence            9988764 3456777765555 9999999995 566899999999999999985442 2344555566667777777654


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceE
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQV  375 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvv  375 (378)
                      ...       ...+.+++++++++++.+++.   .++|+++++++|++.+.+++..+ .++
T Consensus       310 ~~~-------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~  362 (363)
T cd08279         310 GSA-------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENAR-GVI  362 (363)
T ss_pred             cCc-------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCcee-EEe
Confidence            321       234678889999999998863   46799999999999999887764 443

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=295.58  Aligned_cols=305  Identities=24%  Similarity=0.308  Sum_probs=255.9

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |+++++.+++++   +++++.+.|.+.++||+||+.++++|++|+....|..+.. ++|.++|||++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~   76 (334)
T PRK13771          1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-KYPVILGHEVVGTVEEVGENVKGF   76 (334)
T ss_pred             CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC-CCCeeccccceEEEEEeCCCCccC
Confidence            689999888864   8899999999999999999999999999999888866532 457889999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++...                          ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus        77 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         77 KPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999998741                          1488999999999999999999999999999999999999998


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .. .+.++++|+|+|++|.+|++++++|+++|+++++++    .++++.+.++++ ++++++.+ ...+.+++.  +  +
T Consensus       157 ~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~----~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~--~  225 (334)
T PRK13771        157 RA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT----SSESKAKIVSKY-ADYVIVGS-KFSEEVKKI--G--G  225 (334)
T ss_pred             hc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHH-HHHhcCch-hHHHHHHhc--C--C
Confidence            75 899999999999999999999999999999998888    467788888888 77777665 333445553  2  3


Q ss_pred             CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCc-cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064          262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA  340 (378)
Q Consensus       262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (378)
                      +|+++||+|+.....++++++++|+++.+|....... .......+.+++++.+....          ..+.++++++++
T Consensus       226 ~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~  295 (334)
T PRK13771        226 ADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA----------TKRDVEEALKLV  295 (334)
T ss_pred             CcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC----------CHHHHHHHHHHH
Confidence            9999999999888999999999999999996533221 23333445688888876321          235678899999


Q ss_pred             HcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          341 REGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       341 ~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++.+++. ++.|+++++++|++.+.+++..| |++++.
T Consensus       296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~  333 (334)
T PRK13771        296 AEGKIKPVIGAEVSLSEIDKALEELKDKSRIG-KILVKP  333 (334)
T ss_pred             HcCCCcceEeeeEcHHHHHHHHHHHHcCCCcc-eEEEec
Confidence            99998865 46799999999999999988888 998863

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=5.4e-38  Score=297.26  Aligned_cols=310  Identities=22%  Similarity=0.288  Sum_probs=249.0

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||+.++..++.+   +.+++.|.|.+.++||+|||.++|+|++|.+.+.|.++.  .+|.++|||++|+|+++|++++.
T Consensus         7 ~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~   81 (373)
T cd08299           7 KCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTT   81 (373)
T ss_pred             eeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCcc
Confidence            4788888876654   788999999999999999999999999999999887632  46889999999999999999999


Q ss_pred             CCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCC
Q 017064          127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK  159 (378)
Q Consensus       127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~  159 (378)
                      +++||+|++.+.                                               ..|+|++|++++.+.++++|+
T Consensus        82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            999999987520                                               148899999999999999999


Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCC
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      ++++++++++++++.+||+++...+++++|++|+|+|+ |++|++++++|+++|+ +|+++.    .++++++.++++|+
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~a~~lGa  236 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD----INKDKFAKAKELGA  236 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCC
Confidence            99999999999999999999887789999999999976 9999999999999999 688776    47888999999999


Q ss_pred             cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhc-ccCCEEEEEecCCCC-CccccchhhhhcCceE
Q 017064          239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFL-SQGGTMVTYGGMSKK-PITVSTSAFIFKDLSL  312 (378)
Q Consensus       239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~  312 (378)
                      +++++..+.   ....+.+++++  ++|+++||+|+ ..+..++..+ +++|+++.+|..... ..++.+. .+.++.++
T Consensus       237 ~~~i~~~~~~~~~~~~v~~~~~~--~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i  313 (373)
T cd08299         237 TECINPQDYKKPIQEVLTEMTDG--GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTW  313 (373)
T ss_pred             ceEecccccchhHHHHHHHHhCC--CCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeE
Confidence            999987653   23456666663  49999999996 4456666654 679999999965432 2333332 24467888


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++....+..       .+.+.++++.+.++.+++.   ++.|+++++++|++.+.+++. . |+++++
T Consensus       314 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~-k~~~~~  373 (373)
T cd08299         314 KGAVFGGWKS-------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-I-RTVLTF  373 (373)
T ss_pred             EEEEecCCcc-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-c-eEEEeC
Confidence            8887654411       1334456666666655432   568999999999999887664 3 888874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=3.1e-38  Score=272.70  Aligned_cols=299  Identities=23%  Similarity=0.284  Sum_probs=249.0

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec--CCCCCCCCCCEEeeCCCCC
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG--SAVTRLAPGDWVIPSPPSS  140 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~  140 (378)
                      |++++.++|.|++||||+|+.|.+++|.-...+......  -.|+-+|...+|.++...  |+..+|++||.|.+.    
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----
Confidence            899999999999999999999999999443333322211  357778877766555443  557789999999987    


Q ss_pred             cccccceeccCCceEEcCCCCC--HhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEE
Q 017064          141 GTWQSYVVKDQSVWHKVSKDSP--MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN  218 (378)
Q Consensus       141 G~~~~~~~~~~~~~~~iP~~~~--~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~  218 (378)
                      .+|++|.+++.+.+.|++++.-  ......+.++..|||.+|.+.+.+++|++|+|.+|+|++|..+.|+||..|++|+.
T Consensus       101 ~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVG  180 (340)
T COG2130         101 SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG  180 (340)
T ss_pred             ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEE
Confidence            4799999999999999986532  23344567789999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcHHHHHHHHh-CCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCC
Q 017064          219 IIRDRAGSDEAKEKLKG-LGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK  296 (378)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  296 (378)
                      ++    +++||.+++++ +|+|.++|++.++. +.+++.++.  ++|+.||++|++.++..+..|+.++|++.||..+.+
T Consensus       181 ia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~--GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~Y  254 (340)
T COG2130         181 IA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK--GIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQY  254 (340)
T ss_pred             ec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCC--CeEEEEEcCCchHHHHHHHhhccccceeeeeehhhc
Confidence            99    79999999987 99999999999875 567777876  599999999999999999999999999999988765


Q ss_pred             Ccc-cc-----chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccccee-eccccHHHHHHHHHccCC
Q 017064          297 PIT-VS-----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMEL-VPFNNFQTALSKALGLHG  369 (378)
Q Consensus       297 ~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~-~~l~~~~~a~~~~~~~~~  369 (378)
                      +.+ .+     ...++.+.+++.|+...+.    ......+..+++.+|+++|+|+...+. -.||++++||.-|.++++
T Consensus       255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~----~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N  330 (340)
T COG2130         255 NAPELPPGPRRLPLLMAKRLRVQGFIVASD----YDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKN  330 (340)
T ss_pred             CCCCCCCCcchhhHHHhhhheeEEEEechh----hhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCc
Confidence            533 22     2346678999999887322    123345888999999999999998765 479999999999999999


Q ss_pred             CCCceEeeC
Q 017064          370 SQPKQVIKF  378 (378)
Q Consensus       370 ~g~kvvv~~  378 (378)
                      .| |+|+++
T Consensus       331 ~G-K~vvKv  338 (340)
T COG2130         331 FG-KLVVKV  338 (340)
T ss_pred             cc-eEEEEe
Confidence            99 999975

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=9.5e-38  Score=290.58  Aligned_cols=316  Identities=21%  Similarity=0.236  Sum_probs=259.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..+++++. +.+++.|.|.++++||+|||.++++|++|.....|..+..+.+|.++|||++|+|+.  ++++++
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~   77 (324)
T cd08288           1 FKALVLEKDDGGTS-AELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRF   77 (324)
T ss_pred             CeeEEEeccCCCcc-eEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCC
Confidence            78999998887633 889999999999999999999999999999988776543334578899999999998  777889


Q ss_pred             CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH--hccC-CCCEEEEeCCCc
Q 017064          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLN-SGDSIVQNGATS  199 (378)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~-~g~~VlV~g~~g  199 (378)
                      ++||+|+++..     ..|+|++|++++.+.++++|+++++++++.+++.++++++++...  .... +|++|+|+|++|
T Consensus        78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g  157 (324)
T cd08288          78 KPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAG  157 (324)
T ss_pred             CCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCc
Confidence            99999998641     148999999999999999999999999999999999998776421  3444 678999999999


Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~  279 (378)
                      ++|++++|+|+++|+++++++    .++++.+.++++|+++++++++... .+++++.+  ++|.++|++++......+.
T Consensus       158 ~vg~~~~~~A~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~~~~~d~~~~~~~~~~~~  230 (324)
T cd08288         158 GVGSVAVALLARLGYEVVAST----GRPEEADYLRSLGASEIIDRAELSE-PGRPLQKE--RWAGAVDTVGGHTLANVLA  230 (324)
T ss_pred             HHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCEEEEcchhhH-hhhhhccC--cccEEEECCcHHHHHHHHH
Confidence            999999999999999999988    5788899999999999998765332 44555444  3899999999877778889


Q ss_pred             hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 017064          280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT  359 (378)
Q Consensus       280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~  359 (378)
                      .++.+|+++.+|.....+...++..++.+++++.+......    ......+.++.+.+++..+.+++.++.|+++++++
T Consensus       231 ~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  306 (324)
T cd08288         231 QTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMA----PIERRRAAWARLARDLDPALLEALTREIPLADVPD  306 (324)
T ss_pred             HhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecc----cchhhHHHHHHHHHHHhcCCccccceeecHHHHHH
Confidence            99999999999965322223444455578999998764322    11234567888888999998887778899999999


Q ss_pred             HHHHHHccCCCCCceEeeC
Q 017064          360 ALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       360 a~~~~~~~~~~g~kvvv~~  378 (378)
                      |++.+.+++..+ |+|+++
T Consensus       307 a~~~~~~~~~~~-~vvv~~  324 (324)
T cd08288         307 AAEAILAGQVRG-RVVVDV  324 (324)
T ss_pred             HHHHHhcCCccC-eEEEeC
Confidence            999999999998 999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=4.9e-38  Score=294.28  Aligned_cols=305  Identities=20%  Similarity=0.241  Sum_probs=252.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..+++.   ..+++.|.|.+.++||+|||.++++|++|+....|..+.  ..|.++|||++|+|+++|+++..|
T Consensus         1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~   75 (338)
T PRK09422          1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSL   75 (338)
T ss_pred             CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccC
Confidence            789999887763   237899999999999999999999999999988886543  236789999999999999999999


Q ss_pred             CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++.+                           ...|+|++|+.++.++++++|+++++.+++++++.+.|||+++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         76 KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            9999998621                           0148999999999999999999999999999999999999998


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHhc
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLA  257 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~~  257 (378)
                       ..+.+++|++|||+|+ |++|++++++|++. |+++++++    .++++.+.++++|++.+++++. . ....+++.++
T Consensus       156 -~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~  229 (338)
T PRK09422        156 -KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVD----INDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG  229 (338)
T ss_pred             -HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEe----CChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence             5688999999999995 99999999999984 99999988    5788999999999999998754 3 3455666654


Q ss_pred             CCCCCc-EEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          258 NLPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       258 ~~g~~D-vvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                        + +| +++++.++..+..++++++++|+++.+|.... ...++...+..++.++.++....          .+.++++
T Consensus       230 --~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  295 (338)
T PRK09422        230 --G-AHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT----------RQDLEEA  295 (338)
T ss_pred             --C-CcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC----------HHHHHHH
Confidence              3 88 55555556667899999999999999985432 23344455566788887654321          2457788


Q ss_pred             HHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++|.+.+.++.++++++++|++.+.+++..| |+++++
T Consensus       296 ~~l~~~g~l~~~v~~~~~~~~~~a~~~~~~~~~~g-kvvv~~  336 (338)
T PRK09422        296 FQFGAEGKVVPKVQLRPLEDINDIFDEMEQGKIQG-RMVIDF  336 (338)
T ss_pred             HHHHHhCCCCccEEEEcHHHHHHHHHHHHcCCccc-eEEEec
Confidence            89999999877677799999999999999999988 999864

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-37  Score=291.50  Aligned_cols=313  Identities=26%  Similarity=0.300  Sum_probs=267.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++...+.... +.+.+.+.|.++++|++|++.++++|++|+....|.++...+.|.++|||++|+|+++|+++.++
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (336)
T cd08276           1 MKAWRLSGGGGLDN-LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRF   79 (336)
T ss_pred             CeEEEEeccCCCcc-eEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCC
Confidence            78999987754433 78888888889999999999999999999999888766544568899999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccC
Q 017064          128 APGDWVIPSPP--------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN  187 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  187 (378)
                      ++||+|++...                    ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.++
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  159 (336)
T cd08276          80 KVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK  159 (336)
T ss_pred             CCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence            99999998651                    1478999999999999999999999999999999999999998888999


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~~~~g~~Dvv  265 (378)
                      +|++|+|+| +|++|++++++|++.|+++++++    .++++.+.++++|++.+++.+. . ....+.+.+++.+ +|++
T Consensus       160 ~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~  233 (336)
T cd08276         160 PGDTVLVQG-TGGVSLFALQFAKAAGARVIATS----SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG-VDHV  233 (336)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC-CcEE
Confidence            999999996 59999999999999999999888    4778888888899999998765 3 3456777777666 9999


Q ss_pred             EeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCc
Q 017064          266 FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL  345 (378)
Q Consensus       266 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  345 (378)
                      ||+++......++++++++|+++.+|.............++.+++++.++....          ...+++++++++++.+
T Consensus       234 i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l  303 (336)
T cd08276         234 VEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIEAHRI  303 (336)
T ss_pred             EECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHHcCCc
Confidence            999998888999999999999999986544333455566778999999886532          3567788889988888


Q ss_pred             ccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          346 KYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       346 ~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+. ++.|++++++++++.+.+++..+ |+++++
T Consensus       304 ~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~  336 (336)
T cd08276         304 RPVIDRVFPFEEAKEAYRYLESGSHFG-KVVIRV  336 (336)
T ss_pred             ccccCcEEeHHHHHHHHHHHHhCCCCc-eEEEeC
Confidence            765 56899999999999999988888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.8e-38  Score=294.31  Aligned_cols=305  Identities=25%  Similarity=0.305  Sum_probs=250.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--------CCCCCccCCCceeEEEEE
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RPKVPAVGGYEGVGEVYS  119 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~  119 (378)
                      ||++++.++++    +++++.+.|++.+++|+||+.++++|+.|+..+.|....        ..+.|.++|||++|+|++
T Consensus         1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~   76 (350)
T cd08256           1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE   76 (350)
T ss_pred             CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence            68999987764    889999999999999999999999999999988775311        013577899999999999


Q ss_pred             ecCCCC--CCCCCCEEeeCC----------------------------CCCcccccceeccCC-ceEEcCCCCCHhhhhh
Q 017064          120 VGSAVT--RLAPGDWVIPSP----------------------------PSSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT  168 (378)
Q Consensus       120 vG~~v~--~~~~Gd~V~~~~----------------------------~~~G~~~~~~~~~~~-~~~~iP~~~~~~~aa~  168 (378)
                      +|++++  +|++||+|++.+                            ...|+|++|+.++++ .++++|+++++++++.
T Consensus        77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~  156 (350)
T cd08256          77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL  156 (350)
T ss_pred             eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence            999999  999999998721                            125899999999988 5789999999999998


Q ss_pred             ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-
Q 017064          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-  247 (378)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-  247 (378)
                      + .++.|+|+++ ..+++.+|++|+|.|+ |++|++++++|+++|++++++++   .++++.+.++++|++++++.+.. 
T Consensus       157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~v~~~~~~~  230 (350)
T cd08256         157 I-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLD---LKDERLALARKFGADVVLNPPEVD  230 (350)
T ss_pred             h-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc---CCHHHHHHHHHcCCcEEecCCCcC
Confidence            8 7889999998 6689999999999555 99999999999999998666654   36788888899999999987754 


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhh-hhcCceEEEEechhhhcccc
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF-IFKDLSLKGFWLQKWLSSEK  325 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  325 (378)
                      ....+.+++++.+ +|++||++|+ ..+..++++++++|+++.+|.... ...++...+ ..+++++.++....      
T Consensus       231 ~~~~~~~~~~~~~-vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~------  302 (350)
T cd08256         231 VVEKIKELTGGYG-CDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGP------  302 (350)
T ss_pred             HHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCc------
Confidence            3466778877766 9999999996 467889999999999999985432 233333332 35677777765321      


Q ss_pred             HHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          326 ATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       326 ~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                           ..++++++++++|.+++   .++.|+++++++|++.+++++..+ |+|+
T Consensus       303 -----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~-kvv~  350 (350)
T cd08256         303 -----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSI-KVVL  350 (350)
T ss_pred             -----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCce-EEeC
Confidence                 24677899999999987   356899999999999999988887 8875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=8.9e-38  Score=295.23  Aligned_cols=307  Identities=24%  Similarity=0.369  Sum_probs=253.7

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++++...+.+   +++++.+.|.+++++|+||+.++++|++|++.+.|..+.  ..|.++|||++|+|+++|++++.++
T Consensus         2 ~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~   76 (365)
T cd05279           2 KAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLK   76 (365)
T ss_pred             ceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCC
Confidence            56677766654   788999999999999999999999999999998886543  4578999999999999999999999


Q ss_pred             CCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCCCC
Q 017064          129 PGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKDS  161 (378)
Q Consensus       129 ~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~~  161 (378)
                      +||+|++...                                               ..|+|++|+.++++.++++|+++
T Consensus        77 ~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~  156 (365)
T cd05279          77 PGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA  156 (365)
T ss_pred             CCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCC
Confidence            9999987632                                               13689999999999999999999


Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++++.+++++.+||+++...+++.+|++|||+|+ |++|++++++|+++|++++++++   .++++.+.++++|++++
T Consensus       157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD---INKDKFEKAKQLGATEC  232 (365)
T ss_pred             CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCee
Confidence            999999999999999999888889999999999975 99999999999999997555542   37888899999999999


Q ss_pred             EccCcc--c-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcc-cCCEEEEEecCC-CCCccccchhhhhcCceEEEE
Q 017064          242 FTESQL--E-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLS-QGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       242 i~~~~~--~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      ++..+.  + .+.++++++ .+ +|++||++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|.
T Consensus       233 v~~~~~~~~~~~~l~~~~~-~~-~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~  309 (365)
T cd05279         233 INPRDQDKPIVEVLTEMTD-GG-VDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGT  309 (365)
T ss_pred             cccccccchHHHHHHHHhC-CC-CcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEE
Confidence            987664  3 355667664 34 9999999986 66788999999 999999998543 23445555556 677888887


Q ss_pred             echhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      ...++       ...+.+.+++++++++.+++.   ++.|+++++++|++.+.+++..  |++|
T Consensus       310 ~~~~~-------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~--~~~~  364 (365)
T cd05279         310 VFGGW-------KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI--RTIL  364 (365)
T ss_pred             eccCC-------chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce--eeee
Confidence            65433       123567788899999988753   5679999999999999876654  7766

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.6e-37  Score=290.72  Aligned_cols=305  Identities=25%  Similarity=0.352  Sum_probs=254.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||+++++.++.    +.+.+.+.|.+.++||+|+|.++++|+.|+....|..+.. .+|.++|+|++|+|+.+|++++.+
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~   75 (337)
T cd08261           1 MKALVCEKPGR----LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGL   75 (337)
T ss_pred             CeEEEEeCCCc----eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCC
Confidence            68888877653    8899999999999999999999999999999988766543 457789999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++.+.                          ..|+|++|++++++ ++++|+++++++++++ ..++++++++ 
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-  152 (337)
T cd08261          76 KVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-  152 (337)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-
Confidence            99999997321                          24899999999999 9999999999999877 4678888888 


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g  260 (378)
                      ...++.+|++|||+|+ |.+|++++|+|+.+|++|++++    .++++.++++++|++++++++... .+.+.+.+++.+
T Consensus       153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~----~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~  227 (337)
T cd08261         153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVD----IDDERLEFARELGADDTINVGDEDVAARLRELTDGEG  227 (337)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEC----CCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence            6689999999999975 8999999999999999999887    478888899999999999888654 456777777655


Q ss_pred             CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (378)
                       +|+++||+|+ ..+..++++++++|+++.++... ....++...+..+++++.+...          ...+.+++++++
T Consensus       228 -vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l  295 (337)
T cd08261         228 -ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSK-GPVTFPDPEFHKKELTILGSRN----------ATREDFPDVIDL  295 (337)
T ss_pred             -CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCC-CCCccCHHHHHhCCCEEEEecc----------CChhhHHHHHHH
Confidence             9999999986 56688999999999999998543 2333444455667787776521          123567888999


Q ss_pred             HHcCCccc--c-ceeeccccHHHHHHHHHccC-CCCCceEeeC
Q 017064          340 AREGKLKY--D-MELVPFNNFQTALSKALGLH-GSQPKQVIKF  378 (378)
Q Consensus       340 l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~-~~g~kvvv~~  378 (378)
                      +++|.+++  . ...|++++++++++.+.+++ ..+ |+|++|
T Consensus       296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-k~v~~~  337 (337)
T cd08261         296 LESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVI-KVLIEF  337 (337)
T ss_pred             HHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceE-EEEEeC
Confidence            99999987  3 56799999999999999884 667 999986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.1e-37  Score=287.21  Aligned_cols=321  Identities=25%  Similarity=0.330  Sum_probs=268.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+.. +++.+.+.|.+.+++|+|||.++++|+.|+....|.++....+|.++|||++|+|+++|+++..+
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~   79 (323)
T cd05276           1 MKAIVIKEPGGPEV-LELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGW   79 (323)
T ss_pred             CeEEEEecCCCccc-ceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCC
Confidence            68999988776544 77888888889999999999999999999998877665444567899999999999999999999


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~  207 (378)
                      ++||+|++... .|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.....+.++++|+|+|++|++|+++++
T Consensus        80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~  158 (323)
T cd05276          80 KVGDRVCALLA-GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ  158 (323)
T ss_pred             CCCCEEEEecC-CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence            99999998754 48999999999999999999999999999999999999999887889999999999999999999999


Q ss_pred             HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT  286 (378)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~  286 (378)
                      ++++.|++++++.    .++++.+.++++|++.+++..... ...+.+...+.+ +|++||++|+.....++++++++|+
T Consensus       159 ~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~g~~~~~~~~~~~~~~g~  233 (323)
T cd05276         159 LAKALGARVIATA----GSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRG-VDVILDMVGGDYLARNLRALAPDGR  233 (323)
T ss_pred             HHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC-eEEEEECCchHHHHHHHHhhccCCE
Confidence            9999999998887    467778888889998888776543 355666666545 9999999999888889999999999


Q ss_pred             EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064          287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL  365 (378)
Q Consensus       287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~  365 (378)
                      ++.++........++...++.+++++.++..........+......++++.+++.++.+++. ++.|++++++++++.+.
T Consensus       234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  313 (323)
T cd05276         234 LVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRME  313 (323)
T ss_pred             EEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHH
Confidence            99998654433344555556789999988765432222344456677888999999998765 56899999999999999


Q ss_pred             ccCCCCCceEe
Q 017064          366 GLHGSQPKQVI  376 (378)
Q Consensus       366 ~~~~~g~kvvv  376 (378)
                      +++..+ |+++
T Consensus       314 ~~~~~~-kvv~  323 (323)
T cd05276         314 SNEHIG-KIVL  323 (323)
T ss_pred             hCCCcc-eEeC
Confidence            888887 8774

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-37  Score=290.48  Aligned_cols=306  Identities=22%  Similarity=0.256  Sum_probs=247.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC----------CCCCCCccCCCceeEEE
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP----------VRPKVPAVGGYEGVGEV  117 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V  117 (378)
                      ||++++..+ .    +++++.+.|.++++||+|||.++++|+.|+....|...          .....|.++|+|++|+|
T Consensus         1 m~a~~~~~~-~----~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   75 (341)
T cd08262           1 MRAAVFRDG-P----LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV   75 (341)
T ss_pred             CceEEEeCC-c----eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence            688888765 2    88999999999999999999999999999998887321          01135788999999999


Q ss_pred             EEecCCCCC-CCCCCEEeeCCC----------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          118 YSVGSAVTR-LAPGDWVIPSPP----------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       118 ~~vG~~v~~-~~~Gd~V~~~~~----------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      +++|+++++ +++||+|++.+.                ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus        76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~  154 (341)
T cd08262          76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV  154 (341)
T ss_pred             EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence            999999997 999999998732                25899999999999999999999999887 566788999986


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----HHHHHHh
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLL  256 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----~~i~~~~  256 (378)
                       ..+++++|++|||+|+ |++|++++|+|+++|++++++++   .++++.+.++++|++++++++..+.    ..+....
T Consensus       155 -~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  229 (341)
T cd08262         155 -RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASD---FSPERRALALAMGADIVVDPAADSPFAAWAAELARA  229 (341)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC---CCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence             6689999999999976 99999999999999998666654   3688888999999999998765422    1344455


Q ss_pred             cCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064          257 ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY  335 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (378)
                      ++.+ +|++||++|+. ....++++++++|+++.+|..... ..+.......+++++.+....          ..+.+++
T Consensus       230 ~~~~-~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  297 (341)
T cd08262         230 GGPK-PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-DNIEPALAIRKELTLQFSLGY----------TPEEFAD  297 (341)
T ss_pred             CCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-CccCHHHHhhcceEEEEEecc----------cHHHHHH
Confidence            5544 99999999984 668899999999999999855322 222322334577777654322          1135778


Q ss_pred             HHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          336 LLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       336 ~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      +++++++|.+.+.   .+.|++++++++++.+.+++..+ |+|++
T Consensus       298 ~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~-kvvv~  341 (341)
T cd08262         298 ALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHC-KILVD  341 (341)
T ss_pred             HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCce-EEEeC
Confidence            8899999999863   46799999999999999999888 99975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.8e-37  Score=289.95  Aligned_cols=307  Identities=24%  Similarity=0.274  Sum_probs=254.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..+++    +++.+.+.|++ .++||+|||.++++|+.|+..+.|.++.. ++|.++|||++|+|+++|+++.+
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~   75 (345)
T cd08286           1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTN   75 (345)
T ss_pred             CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccc
Confidence            68888887764    88899999886 89999999999999999999988876543 35789999999999999999999


Q ss_pred             CCCCCEEeeCCC---------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHHH
Q 017064          127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTAL  177 (378)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta~  177 (378)
                      +++||+|++.+.                           ..|+|++|+.++.+  .++++|+++++.+++.+++.+++||
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~  155 (345)
T cd08286          76 FKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGY  155 (345)
T ss_pred             cCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHH
Confidence            999999987541                           12889999999987  8999999999999999999999999


Q ss_pred             HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHH
Q 017064          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGL  255 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~  255 (378)
                      +++....++.+|++|||.|+ |++|++++|+|+++| .+++++.    .++++.+.++++|++.++++...+ ...+.++
T Consensus       156 ~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~  230 (345)
T cd08286         156 ECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVD----LDDNRLEVAKKLGATHTVNSAKGDAIEQVLEL  230 (345)
T ss_pred             HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence            98777788999999999886 999999999999999 6777754    467888888999999999887543 3567777


Q ss_pred             hcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064          256 LANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID  334 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (378)
                      +++.+ +|++|||+|. .....++++++++|+++.+|... ....+++..++.+++++.+....           .+.++
T Consensus       231 ~~~~~-~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  297 (345)
T cd08286         231 TDGRG-VDVVIEAVGIPATFELCQELVAPGGHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD-----------TNTTP  297 (345)
T ss_pred             hCCCC-CCEEEECCCCHHHHHHHHHhccCCcEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc-----------hhhHH
Confidence            77655 9999999986 45678889999999999998543 23445556667789998875321           13577


Q ss_pred             HHHHHHHcCCcccc---ceeeccccHHHHHHHHHccC--CCCCceEeeC
Q 017064          335 YLLCLAREGKLKYD---MELVPFNNFQTALSKALGLH--GSQPKQVIKF  378 (378)
Q Consensus       335 ~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~--~~g~kvvv~~  378 (378)
                      ++.++++++.+++.   +++|++++++++++.+.+..  ... |+||++
T Consensus       298 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~-k~~~~~  345 (345)
T cd08286         298 MLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKAL-KVIIDF  345 (345)
T ss_pred             HHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCee-EEEEeC
Confidence            78899999998753   46899999999999998763  344 999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.3e-37  Score=290.49  Aligned_cols=304  Identities=24%  Similarity=0.257  Sum_probs=251.9

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |+++++..++.    +.+++++.|.+. ++||+|+|.++++|+.|+....|.++.  ..|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~   74 (344)
T cd08284           1 MKAVVFKGPGD----VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRT   74 (344)
T ss_pred             CeeEEEecCCC----ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccc
Confidence            67888876643    889999999885 999999999999999999988886653  35788999999999999999999


Q ss_pred             CCCCCEEeeCCC------------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHH
Q 017064          127 LAPGDWVIPSPP------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      +++||+|++.+.                              ..|+|++|+.++.+  .++++|++++++++++++++++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~  154 (344)
T cd08284          75 LKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP  154 (344)
T ss_pred             cCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence            999999998541                              13889999999975  9999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV  252 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i  252 (378)
                      |||+++.. ..+.+|++|||+|+ |++|++++++|+.+|+ +++++.    ..+++.+.++++|+. +++.+.. +...+
T Consensus       155 ta~~~~~~-~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~~~l  227 (344)
T cd08284         155 TGYFGAKR-AQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVD----PVPERLERAAALGAE-PINFEDAEPVERV  227 (344)
T ss_pred             HHHhhhHh-cCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHhCCe-EEecCCcCHHHHH
Confidence            99999975 88999999999974 9999999999999997 777775    467888888999986 4555443 44667


Q ss_pred             HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      .+++++.+ +|++|||+|+ ..+..++++++++|+++.+|..............+.+++++.+...          ...+
T Consensus       228 ~~~~~~~~-~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  296 (344)
T cd08284         228 REATEGRG-ADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC----------PVRS  296 (344)
T ss_pred             HHHhCCCC-CCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC----------Ccch
Confidence            77777655 9999999996 4678999999999999999965433334445566778888775421          1346


Q ss_pred             HHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          332 MIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .+++++++++++.+++   .++.|++++++++++.+.+++. + |+|++
T Consensus       297 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-k~Vi~  343 (344)
T cd08284         297 LFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-L-KVVLD  343 (344)
T ss_pred             hHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-e-EEEec
Confidence            7888999999999885   3567999999999999998777 7 99986

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-37  Score=288.36  Aligned_cols=305  Identities=28%  Similarity=0.368  Sum_probs=254.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |+++++..++..   +.+.+.|.|.+.+++|+|+|.++++|++|+....|..+.. +.|.++|||++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~   76 (332)
T cd08259           1 MKAAILHKPNKP---LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG-KYPLILGHEIVGTVEEVGEGVERF   76 (332)
T ss_pred             CeEEEEecCCCc---eEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC-CCCeeccccceEEEEEECCCCccC
Confidence            688888763332   8889999999999999999999999999999988866543 457899999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++...                          ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~  156 (332)
T cd08259          77 KPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK  156 (332)
T ss_pred             CCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence            99999998751                          1489999999999999999999999999999999999999998


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      . +.+.+++++||+|++|++|+++++++++.|+++++++    .++++.+.++++|.+.+++..+ ..+.+.+..    +
T Consensus       157 ~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~  226 (332)
T cd08259         157 R-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT----RSPEKLKILKELGADYVIDGSK-FSEDVKKLG----G  226 (332)
T ss_pred             H-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCcEEEecHH-HHHHHHhcc----C
Confidence            7 8999999999999999999999999999999999888    4667788888899988887655 334444432    3


Q ss_pred             CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064          262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR  341 (378)
Q Consensus       262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (378)
                      +|++++|+|......++++++++|+++.++........+.......+++++.++...          ..+.+++++++++
T Consensus       227 ~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~  296 (332)
T cd08259         227 ADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA----------TKADVEEALKLVK  296 (332)
T ss_pred             CCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC----------CHHHHHHHHHHHH
Confidence            999999999988889999999999999998554332222333344577777765311          2356788889999


Q ss_pred             cCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          342 EGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       342 ~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      ++.+++. ++.|+++++++||+.+.+++..+ |+|++
T Consensus       297 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~  332 (332)
T cd08259         297 EGKIKPVIDRVVSLEDINEALEDLKSGKVVG-RIVLK  332 (332)
T ss_pred             cCCCccceeEEEcHHHHHHHHHHHHcCCccc-EEEeC
Confidence            9998865 46899999999999999998888 99874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=3.5e-37  Score=289.06  Aligned_cols=305  Identities=23%  Similarity=0.328  Sum_probs=252.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+++.    +.+.+.+.|++.+++|+|||+++++|+.|+....|.++ ....|.++|+|++|+|+++|++++.+
T Consensus         1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~   75 (343)
T cd08235           1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF   75 (343)
T ss_pred             CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCC
Confidence            58888887663    78899999999999999999999999999998887654 22357789999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCc-----eEEcCCCCCHhhhhhccccHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSV-----WHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~-----~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      ++||+|++.+.                          ..|+|++|++++.+.     ++++|+++++.+++.+ ....+|
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a  154 (343)
T cd08235          76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC  154 (343)
T ss_pred             CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence            99999998631                          248999999999998     9999999999999876 678899


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG  254 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~  254 (378)
                      |+++.. .++.+|++|||+|+ |++|++++|+|++.|++ +++++    .++++.+.++.+|.++++++++.. .+.+.+
T Consensus       155 ~~~l~~-~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~  228 (343)
T cd08235         155 INAQRK-AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSD----LNEFRLEFAKKLGADYTIDAAEEDLVEKVRE  228 (343)
T ss_pred             HHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEecCCccCHHHHHHH
Confidence            999966 58999999999975 99999999999999999 77666    477788888889999999887654 456777


Q ss_pred             HhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064          255 LLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM  332 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (378)
                      .+++.+ +|++|||+++. ....++++++++|+++.++...... ..++...+..+++.+.+....          ..+.
T Consensus       229 ~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~  297 (343)
T cd08235         229 LTDGRG-ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA----------SPED  297 (343)
T ss_pred             HhCCcC-CCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC----------Chhh
Confidence            777665 99999999965 6688999999999999998544321 333445566677877765432          1145


Q ss_pred             HHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          333 IDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       333 ~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      +++++++++++.+++   ....|+++++.++++.+.+++ .+ |+|+.
T Consensus       298 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~-k~vi~  343 (343)
T cd08235         298 YKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SL-KIVIT  343 (343)
T ss_pred             HHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cE-EEEeC
Confidence            778889999999874   245799999999999999998 87 99873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=5e-37  Score=285.06  Aligned_cols=319  Identities=25%  Similarity=0.341  Sum_probs=268.9

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+.. +.+.+.+.|.+.+++|+|++.++++|++|.....|..+...+.|.++|||++|+|+.+|+++..|
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (325)
T cd08253           1 MRAIRYHEFGAPDV-LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGL   79 (325)
T ss_pred             CceEEEcccCCccc-ceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCC
Confidence            57888877665433 78889999999999999999999999999998887665444578899999999999999999999


Q ss_pred             CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      ++||+|++...    ..|++++|+.++++.++++|+++++.+++.+++++.+||+++...+++.+|++|+|+|+++++|+
T Consensus        80 ~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~  159 (325)
T cd08253          80 KVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGH  159 (325)
T ss_pred             CCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHH
Confidence            99999998762    14899999999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      +++++++++|+++++++    .++++.+.++++|++++++....+ ...+.+.+.+.+ +|++++|+|+......+++++
T Consensus       160 ~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~  234 (325)
T cd08253         160 AAVQLARWAGARVIATA----SSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQG-VDVIIEVLANVNLAKDLDVLA  234 (325)
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc-eEEEEECCchHHHHHHHHhhC
Confidence            99999999999999888    467788888889999998876543 455666666555 999999999988888999999


Q ss_pred             cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTAL  361 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~  361 (378)
                      ++|+++.++... ....++...++.+++++.+.....    ..+....+.++.+.+++.++.+++. +..|+++++++++
T Consensus       235 ~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  309 (325)
T cd08253         235 PGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYT----ATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAH  309 (325)
T ss_pred             CCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhh----cCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHH
Confidence            999999998543 233344455567788887765322    2345566788888899999988765 5689999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      +.+.++...| |+++++
T Consensus       310 ~~~~~~~~~~-kvv~~~  325 (325)
T cd08253         310 EAVESGGAIG-KVVLDP  325 (325)
T ss_pred             HHHHcCCCcc-eEEEeC
Confidence            9999988888 999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.5e-37  Score=287.62  Aligned_cols=310  Identities=25%  Similarity=0.274  Sum_probs=261.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++.+..++++.  +.+.+.+.|.+.+++|+|++.++++|+.|.....|.++...+.|.++|+|++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGL--LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCc--eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence            6899999888764  57778888999999999999999999999999888776444567899999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++.+.                          ..|+|++|+.++.+.++++|+++++.+++.++.++.|||+++.
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~  158 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV  158 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            99999986210                          1388999999999999999999999999999999999999998


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g  260 (378)
                      ....+.++++|||.|+ |.+|++++++|+.+|++|++++    .++++.+.++++|++++++...... ..+ ..+.+.+
T Consensus       159 ~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~  232 (338)
T cd08254         159 RAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVD----IKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG  232 (338)
T ss_pred             hccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC
Confidence            8888999999999865 8999999999999999988887    4788888889999999988776543 334 5555545


Q ss_pred             CCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       261 ~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (378)
                       +|+++||+|.. .+..++++++++|+++.+|... ....++...++.++.++.++...          ..+.+..++++
T Consensus       233 -~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l  300 (338)
T cd08254         233 -FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGG----------TPEDLPEVLDL  300 (338)
T ss_pred             -ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCC-CCCccCHHHHhhCccEEEEeccC----------CHHHHHHHHHH
Confidence             99999999864 6689999999999999998543 23345556677788888876432          12567788899


Q ss_pred             HHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          340 AREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       340 l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++.+++.++.|++++++++++.+.+++..+ |+|+++
T Consensus       301 l~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~  338 (338)
T cd08254         301 IAKGKLDPQVETRPLDEIPEVLERLHKGKVKG-RVVLVP  338 (338)
T ss_pred             HHcCCCcccceeEcHHHHHHHHHHHHcCCccc-eEEEeC
Confidence            99999987777899999999999999999998 999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=3.7e-37  Score=288.05  Aligned_cols=319  Identities=22%  Similarity=0.240  Sum_probs=260.9

Q ss_pred             cceEEEcccCCCcc--ceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      |+++++..++.+..  .+...+.+.|.+.+++|+||+.++++|++|+....+..+. .+.|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~   79 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT   79 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence            57888888877541  2566778888899999999999999999999988776552 24577899999999999999999


Q ss_pred             CCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC-----CCEEEEeCCC
Q 017064          126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT  198 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlV~g~~  198 (378)
                      .+++||+|++...  ..|+|++|+.++.++++++|+++++++++.+++...+||+++...+.+.+     |++|+|+|++
T Consensus        80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~  159 (336)
T cd08252          80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA  159 (336)
T ss_pred             CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence            9999999998642  35899999999999999999999999999999999999999888788887     9999999998


Q ss_pred             chHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC-ccHHH
Q 017064          199 SIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK  276 (378)
Q Consensus       199 g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~  276 (378)
                      |++|++++++|+++| ++|++++    .++++.+.++++|++++++........++.. ++. ++|+++||+|+ ..+..
T Consensus       160 g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~-~~d~vl~~~~~~~~~~~  233 (336)
T cd08252         160 GGVGSIAIQLAKQLTGLTVIATA----SRPESIAWVKELGADHVINHHQDLAEQLEAL-GIE-PVDYIFCLTDTDQHWDA  233 (336)
T ss_pred             chHHHHHHHHHHHcCCcEEEEEc----CChhhHHHHHhcCCcEEEeCCccHHHHHHhh-CCC-CCCEEEEccCcHHHHHH
Confidence            999999999999999 9999888    4678888899999999998765333445533 333 49999999996 57789


Q ss_pred             HHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccc--cHHHHHHHHHHHHHHHHcCCccccc----e
Q 017064          277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSE--KATECRNMIDYLLCLAREGKLKYDM----E  350 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~~~~~----~  350 (378)
                      ++++++++|+++.+|...   ..++...+..+++++.+..+..+....  .+......++++++++.+|.+++..    .
T Consensus       234 ~~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  310 (336)
T cd08252         234 MAELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLG  310 (336)
T ss_pred             HHHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeec
Confidence            999999999999998442   334444555688888886653211111  1224456788999999999998652    3


Q ss_pred             eeccccHHHHHHHHHccCCCCCceEee
Q 017064          351 LVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++++++++|++.+.++...+ |++++
T Consensus       311 ~~~~~~~~~a~~~~~~~~~~~-~vv~~  336 (336)
T cd08252         311 PINAENLREAHALLESGKTIG-KIVLE  336 (336)
T ss_pred             CCCHHHHHHHHHHHHcCCccc-eEEeC
Confidence            479999999999999999888 98874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.1e-36  Score=282.02  Aligned_cols=318  Identities=25%  Similarity=0.312  Sum_probs=265.0

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      +++....++.+.. +.+.+.+.+.+.+++|+|+|.++++|++|+....+.++.  .+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~   77 (320)
T cd05286           1 KAVRIHKTGGPEV-LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFK   77 (320)
T ss_pred             CeEEEecCCCccc-eEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCC
Confidence            3555555554433 677777777789999999999999999999988776543  3577899999999999999999999


Q ss_pred             CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (378)
Q Consensus       129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l  208 (378)
                      +||+|++... .|+|++|+.++.+.++++|+++++.+++.+++.++++|+++....++.+|++|+|+|++|++|++++++
T Consensus        78 ~G~~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~  156 (320)
T cd05286          78 VGDRVAYAGP-PGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW  156 (320)
T ss_pred             CCCEEEEecC-CCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence            9999998751 389999999999999999999999999999999999999998888999999999999989999999999


Q ss_pred             HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM  287 (378)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~  287 (378)
                      |+++|+++++++    .++++.+.++++|++++++..... ...++..+.+.+ +|++++|+++.....++++++++|++
T Consensus       157 a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~  231 (320)
T cd05286         157 AKALGATVIGTV----SSEEKAELARAAGADHVINYRDEDFVERVREITGGRG-VDVVYDGVGKDTFEGSLDSLRPRGTL  231 (320)
T ss_pred             HHHcCCEEEEEc----CCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCC-eeEEEECCCcHhHHHHHHhhccCcEE
Confidence            999999999887    477888888999999998776543 356777776666 99999999998888999999999999


Q ss_pred             EEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHc
Q 017064          288 VTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALG  366 (378)
Q Consensus       288 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~  366 (378)
                      +.+|........++...+..+++++.+.....+.  .++....+.+++++++++++.+.+. ++.|++++++++++.+.+
T Consensus       232 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~  309 (320)
T cd05286         232 VSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI--ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLES  309 (320)
T ss_pred             EEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc--CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHc
Confidence            9998544332233444444788998876654432  2455667788899999999988865 467999999999999999


Q ss_pred             cCCCCCceEeeC
Q 017064          367 LHGSQPKQVIKF  378 (378)
Q Consensus       367 ~~~~g~kvvv~~  378 (378)
                      +...+ |+|+++
T Consensus       310 ~~~~~-~vv~~~  320 (320)
T cd05286         310 RKTTG-KLLLIP  320 (320)
T ss_pred             CCCCc-eEEEeC
Confidence            88888 999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1e-37  Score=292.06  Aligned_cols=312  Identities=27%  Similarity=0.346  Sum_probs=252.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |+++++..++ +.. +++++.+.|.++++||+||+.++++|++|+....+..+  ...|.++|||++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~-~~~-~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPG-GGL-LVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCC-CCc-ccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcC
Confidence            6899999885 333 88899999999999999999999999999987755441  1246789999999999999999999


Q ss_pred             CCCCEEeeCCC-------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc----------CCCC
Q 017064          128 APGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL----------NSGD  190 (378)
Q Consensus       128 ~~Gd~V~~~~~-------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~  190 (378)
                      ++||+|++...       ..|+|++|++++.+.++++|+++++.+++.+++.+.|||+++.+..++          .+++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~  156 (339)
T cd08249          77 KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK  156 (339)
T ss_pred             CCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence            99999998753       248999999999999999999999999999999999999998776554          7899


Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|+|+|++|.+|++++++|+++|+++++++     ++++.+.++++|++++++.++.. .+.+++.++ . ++|+++|++
T Consensus       157 ~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~-~~d~vl~~~  229 (339)
T cd08249         157 PVLIWGGSSSVGTLAIQLAKLAGYKVITTA-----SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-G-KLRYALDCI  229 (339)
T ss_pred             EEEEEcChhHHHHHHHHHHHHcCCeEEEEE-----CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-C-CeeEEEEee
Confidence            999999999999999999999999998877     34677888899999999887654 455766665 3 499999999


Q ss_pred             CC-ccHHHHHHhccc--CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhc--cccHHHHHHHHHHHHHHHHcCC
Q 017064          270 GG-NSASKVLKFLSQ--GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLS--SEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       270 g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      |+ ..+..+++++++  +|+++.+|......       ....+.+........+..  ...+......++++.++++++.
T Consensus       230 g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (339)
T cd08249         230 STPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGK  302 (339)
T ss_pred             ccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCC
Confidence            98 777999999999  99999998554322       112233333333222211  0123334567888999999999


Q ss_pred             cccc-ceeec--cccHHHHHHHHHccC-CCCCceEeeC
Q 017064          345 LKYD-MELVP--FNNFQTALSKALGLH-GSQPKQVIKF  378 (378)
Q Consensus       345 ~~~~-~~~~~--l~~~~~a~~~~~~~~-~~g~kvvv~~  378 (378)
                      +.+. ...++  ++++++|++.+..++ ..+ |+|+++
T Consensus       303 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-kvvv~~  339 (339)
T cd08249         303 LKPHPVRVVEGGLEGVQEGLDLLRKGKVSGE-KLVVRL  339 (339)
T ss_pred             ccCCCceecCCcHHHHHHHHHHHHCCCccce-EEEEeC
Confidence            9875 34677  999999999999998 888 999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-36  Score=284.12  Aligned_cols=314  Identities=29%  Similarity=0.365  Sum_probs=262.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++...+.+.. +.+.+.+.|.+.+++|+|++.++++|++|+..+.|..+....+|..+|||++|+|+.+|+++..+
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (342)
T cd08266           1 MKAVVIRGHGGPEV-LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNV   79 (342)
T ss_pred             CeEEEEecCCCccc-eeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCC
Confidence            68888876555443 78888888889999999999999999999998887654333457889999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++.+.                          ..|++++|+.++.+.++++|+++++.+++++++++.+||+++.
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~  159 (342)
T cd08266          80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV  159 (342)
T ss_pred             CCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHH
Confidence            99999998632                          2478999999999999999999999999999999999999998


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g  260 (378)
                      +...+.++++++|+|+++++|+++++++++.|+++++++    .++++.+.++.+|.+.+++..+. ....+.+.+.+.+
T Consensus       160 ~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd08266         160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATA----GSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRG  235 (342)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC
Confidence            888999999999999988999999999999999998887    46777888888898888876553 3355666665544


Q ss_pred             CCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA  340 (378)
Q Consensus       261 ~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (378)
                       +|++++++|...+..++++++++|+++.++........++....+.+++++.+.....          ...+.++++++
T Consensus       236 -~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l  304 (342)
T cd08266         236 -VDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT----------KAELDEALRLV  304 (342)
T ss_pred             -CcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC----------HHHHHHHHHHH
Confidence             9999999999888999999999999999986554333344445567888888876532          24677888999


Q ss_pred             HcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          341 REGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       341 ~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++.+++. ++.|++++++++++.+.++...+ |+|++.
T Consensus       305 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~  342 (342)
T cd08266         305 FRGKLKPVIDSVFPLEEAAEAHRRLESREQFG-KIVLTP  342 (342)
T ss_pred             HcCCcccceeeeEcHHHHHHHHHHHHhCCCCc-eEEEeC
Confidence            99988865 56899999999999999888888 999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-36  Score=282.28  Aligned_cols=319  Identities=24%  Similarity=0.308  Sum_probs=266.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+.. +.+.+.+.|.+.+++|+|++.++++|++|.....+........|.++|||++|+|+.+|+++..+
T Consensus         1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (326)
T cd08272           1 MKALVLESFGGPEV-FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRF   79 (326)
T ss_pred             CeEEEEccCCCchh-eEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCC
Confidence            68999988887654 77888888889999999999999999999998877654333457889999999999999999999


Q ss_pred             CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      ++||+|++...    ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....++.+|++++|+|+++.+|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~  159 (326)
T cd08272          80 RVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH  159 (326)
T ss_pred             CCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHH
Confidence            99999998751    14789999999999999999999999999999999999999888899999999999999899999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ  283 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~  283 (378)
                      +++++|+.+|+++++++    .+ ++.+.++++|++.+++........+...+++.+ +|+++||+|+.....+++++++
T Consensus       160 ~~~~~a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~  233 (326)
T cd08272         160 VAVQLAKAAGARVYATA----SS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGETLDASFEAVAL  233 (326)
T ss_pred             HHHHHHHHcCCEEEEEe----ch-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCC-CcEEEECCChHHHHHHHHHhcc
Confidence            99999999999999887    35 778888889999888776553355777777655 9999999999878889999999


Q ss_pred             CCEEEEEecCCCCCccccchhhhhcCceEEEEechh-hhccccHHHHHHHHHHHHHHHHcCCcccc-c-eeeccccHHHH
Q 017064          284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK-WLSSEKATECRNMIDYLLCLAREGKLKYD-M-ELVPFNNFQTA  360 (378)
Q Consensus       284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~-~~~~l~~~~~a  360 (378)
                      +|+++.++...    +........+++++.+..... +....++....+.+.++++++.++.+++. . +.|++++++++
T Consensus       234 ~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~  309 (326)
T cd08272         234 YGRVVSILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAA  309 (326)
T ss_pred             CCEEEEEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHH
Confidence            99999998543    222223346888888876532 11223445566788999999999998865 3 78999999999


Q ss_pred             HHHHHccCCCCCceEeeC
Q 017064          361 LSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       361 ~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.+.+++..+ |+|+++
T Consensus       310 ~~~~~~~~~~~-~vv~~~  326 (326)
T cd08272         310 HARLESGSARG-KIVIDV  326 (326)
T ss_pred             HHHHHcCCccc-EEEEEC
Confidence            99999888888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1e-36  Score=289.05  Aligned_cols=304  Identities=22%  Similarity=0.211  Sum_probs=246.6

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..++.    ++++++|.|.+ +++||+|||.++++|++|++...|..+.  ..|.++|||++|+|+++|+++..
T Consensus         1 m~~~~~~~~~~----~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~   74 (375)
T cd08282           1 MKAVVYGGPGN----VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVES   74 (375)
T ss_pred             CceEEEecCCc----eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCc
Confidence            57888876653    88999999986 8999999999999999999999887652  46889999999999999999999


Q ss_pred             CCCCCEEeeCCC------------------------------------CCcccccceeccCC--ceEEcCCCCCHh---h
Q 017064          127 LAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPME---Y  165 (378)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~---~  165 (378)
                      +++||+|++.+.                                    .+|+|++|++++.+  .++++|++++++   +
T Consensus        75 ~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~  154 (375)
T cd08282          75 LKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDD  154 (375)
T ss_pred             CCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhh
Confidence            999999986211                                    13889999999975  899999999998   5


Q ss_pred             hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEcc
Q 017064          166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (378)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~  244 (378)
                      +++++.++.|||+++ ..+.+.+|++|+|.|+ |++|++++|+|+++|+ +++++.    .++++.+.++++|++ .+++
T Consensus       155 ~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~----~~~~~~~~~~~~g~~-~v~~  227 (375)
T cd08282         155 YLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVD----HVPERLDLAESIGAI-PIDF  227 (375)
T ss_pred             eeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCCe-Eecc
Confidence            677888899999999 6689999999999876 9999999999999998 677754    478888999999984 5666


Q ss_pred             Ccc-cHHHHHHHhcCCCCCcEEEeCCCCcc------------HHHHHHhcccCCEEEEEecCCCCC------------cc
Q 017064          245 SQL-EVKNVKGLLANLPEPALGFNCVGGNS------------ASKVLKFLSQGGTMVTYGGMSKKP------------IT  299 (378)
Q Consensus       245 ~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~------------~~  299 (378)
                      ++. ..+.+.+.++ .+ +|+++||+|+..            +..++++++++|+++..|......            ..
T Consensus       228 ~~~~~~~~i~~~~~-~~-~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~  305 (375)
T cd08282         228 SDGDPVEQILGLEP-GG-VDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELS  305 (375)
T ss_pred             CcccHHHHHHHhhC-CC-CCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcccc
Confidence            543 3456777766 34 999999999864            688999999999999887543211            12


Q ss_pred             ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      ++...++.++..+.+....          ..+.++.++++++++++++   .++.|+++++++|++.+.+++ .+ |+|+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~-kvvv  373 (375)
T cd08282         306 FDFGLLWAKGLSFGTGQAP----------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET-KVVI  373 (375)
T ss_pred             ccHHHHHhcCcEEEEecCC----------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce-EEEe
Confidence            3344455666666554321          2356778889999999986   457899999999999999888 87 9998


Q ss_pred             eC
Q 017064          377 KF  378 (378)
Q Consensus       377 ~~  378 (378)
                      ++
T Consensus       374 ~~  375 (375)
T cd08282         374 KP  375 (375)
T ss_pred             CC
Confidence            64

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.4e-36  Score=285.03  Aligned_cols=308  Identities=27%  Similarity=0.308  Sum_probs=253.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++...+.    +.+++.+.|+++++||+||+.++++|+.|+....+.+..  ..|.++|+|++|+|+.+|+++..|
T Consensus         1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~   74 (343)
T cd08236           1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDL   74 (343)
T ss_pred             CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcC
Confidence            68899987653    788999999999999999999999999999988776522  357889999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++++.                          ..|+|++|+.++.+.++++|+++++++++++ ..+++||+++.
T Consensus        75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~  153 (343)
T cd08236          75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR  153 (343)
T ss_pred             CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence            99999998721                          2589999999999999999999999999888 57889999996


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                       ...+.++++|+|+|+ |.+|++++|+|+++|++ +++++    .++++.+.++++|++.+++++.....++.+..++.+
T Consensus       154 -~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~  227 (343)
T cd08236         154 -LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVD----IDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG  227 (343)
T ss_pred             -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCC
Confidence             688999999999975 99999999999999998 87777    467788888899999999887654566777777765


Q ss_pred             CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCcc---ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPIT---VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                       +|++|||.|+ .....++++++++|+++.+|.... ...   .+...++.+++++.++.....    .+ ...+.++++
T Consensus       228 -~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~  300 (343)
T cd08236         228 -ADLVIEAAGSPATIEQALALARPGGKVVLVGIPYG-DVTLSEEAFEKILRKELTIQGSWNSYS----AP-FPGDEWRTA  300 (343)
T ss_pred             -CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC-CcccccCCHHHHHhcCcEEEEEeeccc----cc-cchhhHHHH
Confidence             9999999986 456889999999999999985532 211   123345678999988865322    11 234567888


Q ss_pred             HHHHHcCCccc--c-ceeeccccHHHHHHHHHc-cCCCCCceEe
Q 017064          337 LCLAREGKLKY--D-MELVPFNNFQTALSKALG-LHGSQPKQVI  376 (378)
Q Consensus       337 ~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~-~~~~g~kvvv  376 (378)
                      .++++++.+++  . ...+++++++++++.+.+ ++..+ |+|+
T Consensus       301 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~v~  343 (343)
T cd08236         301 LDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSG-KVLL  343 (343)
T ss_pred             HHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCee-EEeC
Confidence            99999999862  2 467999999999999998 55666 8875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=3.8e-36  Score=279.25  Aligned_cols=323  Identities=24%  Similarity=0.301  Sum_probs=267.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |+++.+..++.+.. +.+.+.+.|.+.+++|+|+|.++++|+.|+....+.++....+|..+|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~   79 (325)
T TIGR02824         1 MKAIEITEPGGPEV-LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRW   79 (325)
T ss_pred             CceEEEccCCCccc-ceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCC
Confidence            57888777665543 67777777778999999999999999999988877654333457899999999999999999999


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~  207 (378)
                      ++||+|++... .|++++|+.++.+.++++|+++++.+++++++++.++|+++.....+.+|++++|+|++|++|+++++
T Consensus        80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~  158 (325)
T TIGR02824        80 KVGDRVCALVA-GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ  158 (325)
T ss_pred             CCCCEEEEccC-CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence            99999998753 38999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT  286 (378)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~  286 (378)
                      ++++.|++++++.    .++++.+.++++|++.+++.... ....+.+..++.+ +|++++|+|+.....++++++++|+
T Consensus       159 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~  233 (325)
T TIGR02824       159 LAKAFGARVFTTA----GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKG-VDVILDIVGGSYLNRNIKALALDGR  233 (325)
T ss_pred             HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCC-eEEEEECCchHHHHHHHHhhccCcE
Confidence            9999999999888    46777778888999888876653 3455776666555 9999999998878899999999999


Q ss_pred             EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064          287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL  365 (378)
Q Consensus       287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~  365 (378)
                      ++.+|........+++..++.+++++.+...........+......+.+++++++++.+++. +..|++++++++++.+.
T Consensus       234 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  313 (325)
T TIGR02824       234 IVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALME  313 (325)
T ss_pred             EEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHH
Confidence            99998543222344555566899999998865422222334456677888999999988764 56799999999999999


Q ss_pred             ccCCCCCceEeeC
Q 017064          366 GLHGSQPKQVIKF  378 (378)
Q Consensus       366 ~~~~~g~kvvv~~  378 (378)
                      +++..+ |+++++
T Consensus       314 ~~~~~~-~~v~~~  325 (325)
T TIGR02824       314 SGDHIG-KIVLTV  325 (325)
T ss_pred             hCCCcc-eEEEeC
Confidence            888888 999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.6e-36  Score=279.04  Aligned_cols=322  Identities=29%  Similarity=0.389  Sum_probs=269.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++.+...+.+.. +.+.+.+.|.+.+++|+|+|.++++|+.|.....+..+....+|..+|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (328)
T cd08268           1 MRAVRFHQFGGPEV-LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGF   79 (328)
T ss_pred             CeEEEEeccCCcce-eEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcC
Confidence            57888887665544 77888888889999999999999999999988877655444457889999999999999999999


Q ss_pred             CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      ++||+|+++..    ..|++++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.++++++|+|++|++|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~  159 (328)
T cd08268          80 AVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL  159 (328)
T ss_pred             CCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence            99999998743    24889999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      +++++++..|+++++++    .+.++.+.++++|++.+++.+... ...+...+.+.+ +|++++++|+.....++++++
T Consensus       160 ~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~  234 (328)
T cd08268         160 AAIQIANAAGATVIATT----RTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKG-VDVVFDPVGGPQFAKLADALA  234 (328)
T ss_pred             HHHHHHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCC-ceEEEECCchHhHHHHHHhhc
Confidence            99999999999999888    467778888889998888877644 345666666655 999999999988889999999


Q ss_pred             cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTAL  361 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~  361 (378)
                      ++|+++.+|........++....+.+++++.+.......  .++......++.+.+++.++.+.+. +..|+++++.+++
T Consensus       235 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (328)
T cd08268         235 PGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAH  312 (328)
T ss_pred             cCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHH
Confidence            999999998544322334444457889999888765432  3455666788888888988888765 5679999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      +.+.+++..+ |+|+++
T Consensus       313 ~~~~~~~~~~-~vv~~~  328 (328)
T cd08268         313 RYLESGQQIG-KIVVTP  328 (328)
T ss_pred             HHHHcCCCCc-eEEEeC
Confidence            9999888888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-36  Score=283.35  Aligned_cols=298  Identities=27%  Similarity=0.373  Sum_probs=242.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++ .. .+++.+.+.|+++++||+||+.++++|++|+....+. .. ..+|.++|||++|+|+.+|++++.+
T Consensus         1 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSG-IE-NLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCC-CC-ceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCC
Confidence            6888887665 32 3888888888899999999999999999999887642 21 1357789999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++.+.                          ..|+|++|++++.+.++++|+++++++++.+++++.+||+++.
T Consensus        77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~  156 (325)
T cd08264          77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK  156 (325)
T ss_pred             CCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence            99999997632                          2489999999999999999999999999999999999999997


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      . +++++|++|+|+|++|++|++++++|+++|++++++++        .+.++++|++++++.++. .+.+++++ +  +
T Consensus       157 ~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~--------~~~~~~~g~~~~~~~~~~-~~~l~~~~-~--~  223 (325)
T cd08264         157 T-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEV-EEKVKEIT-K--M  223 (325)
T ss_pred             h-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH--------HHHHHHhCCCeeecchHH-HHHHHHHh-C--C
Confidence            6 89999999999999999999999999999999887762        256678999999887643 34566666 2  4


Q ss_pred             CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064          262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR  341 (378)
Q Consensus       262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (378)
                      +|+++|++|+..+..++++++++|+++.+|........++...++.++.++.+...+          .++.++++++++.
T Consensus       224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~  293 (325)
T cd08264         224 ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG----------TRKELLELVKIAK  293 (325)
T ss_pred             CCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC----------CHHHHHHHHHHHH
Confidence            999999999887899999999999999998643223445556666777787776432          1245777778886


Q ss_pred             cCCccccceeeccccHHHHHHHHHccCCCCCce
Q 017064          342 EGKLKYDMELVPFNNFQTALSKALGLHGSQPKQ  374 (378)
Q Consensus       342 ~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kv  374 (378)
                      ...+ ...+.|+++++++|++.+.+++..+ |+
T Consensus       294 ~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~-kv  324 (325)
T cd08264         294 DLKV-KVWKTFKLEEAKEALKELFSKERDG-RI  324 (325)
T ss_pred             cCCc-eeEEEEcHHHHHHHHHHHHcCCCcc-cc
Confidence            4442 2356799999999999999888776 65

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-36  Score=281.88  Aligned_cols=313  Identities=26%  Similarity=0.338  Sum_probs=253.9

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++.+...+.+.+ +++.+.+.|.+.+++|+|++.++++|++|+....|..+....+|.++|||++|+|+.+|+++..|+
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           2 REVVVTRRGGPEV-LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             eeEEEccCCCccc-EEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence            7888888887766 889999999999999999999999999999988887654334688999999999999999999999


Q ss_pred             CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (378)
Q Consensus       129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l  208 (378)
                      +||+|++... .|+|++|++++.+.++++|+++++.+++.+++++.+||+++.+.+.+.+|++|+|+|++|++|++++++
T Consensus        81 ~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~  159 (331)
T cd08273          81 VGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLEL  159 (331)
T ss_pred             CCCEEEEeCC-CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence            9999999754 389999999999999999999999999999999999999998878899999999999999999999999


Q ss_pred             HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV  288 (378)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v  288 (378)
                      |++.|++|++++    . +++.+.++++|++.+ +....+..+. ...++  ++|+++||+|+.....++++++++|+++
T Consensus       160 a~~~g~~v~~~~----~-~~~~~~~~~~g~~~~-~~~~~~~~~~-~~~~~--~~d~vl~~~~~~~~~~~~~~l~~~g~~v  230 (331)
T cd08273         160 ALLAGAEVYGTA----S-ERNHAALRELGATPI-DYRTKDWLPA-MLTPG--GVDVVFDGVGGESYEESYAALAPGGTLV  230 (331)
T ss_pred             HHHcCCEEEEEe----C-HHHHHHHHHcCCeEE-cCCCcchhhh-hccCC--CceEEEECCchHHHHHHHHHhcCCCEEE
Confidence            999999998888    4 777888888997653 4433222211 33332  4999999999988889999999999999


Q ss_pred             EEecCCCCCc-cccc--------------hhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceee
Q 017064          289 TYGGMSKKPI-TVST--------------SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELV  352 (378)
Q Consensus       289 ~~g~~~~~~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~  352 (378)
                      .+|.....+. .+..              .....+++++.+...  + ...++....+.++.+++++++|.+++. .+.|
T Consensus       231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~  307 (331)
T cd08273         231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--D-RAEDPKLFRQDLTELLDLLAKGKIRPKIAKRL  307 (331)
T ss_pred             EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--h-cccCHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence            9985543221 1111              111223333333322  1 223455667889999999999999875 5689


Q ss_pred             ccccHHHHHHHHHccCCCCCceEe
Q 017064          353 PFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       353 ~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      ++++++++++.+.+++..| |+|+
T Consensus       308 ~~~~~~~a~~~~~~~~~~g-kvv~  330 (331)
T cd08273         308 PLSEVAEAHRLLESGKVVG-KIVL  330 (331)
T ss_pred             cHHHHHHHHHHHHcCCCcc-eEEe
Confidence            9999999999999888888 8875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.3e-36  Score=282.76  Aligned_cols=306  Identities=22%  Similarity=0.297  Sum_probs=247.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..+++    +.+.+.|.|.+ +++||+||+.++++|++|+..+.|.++.  ..|.++|||++|+|+++|+++..
T Consensus         1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~   74 (345)
T cd08287           1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTS   74 (345)
T ss_pred             CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCc
Confidence            68889987664    88999999986 9999999999999999999988876653  35789999999999999999999


Q ss_pred             CCCCCEEee-CCC-------------------------CCcccccceeccCC--ceEEcCCCCCHhhhh-----hccccH
Q 017064          127 LAPGDWVIP-SPP-------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAA-----TIIVNP  173 (378)
Q Consensus       127 ~~~Gd~V~~-~~~-------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa-----~~~~~~  173 (378)
                      +++||+|++ ...                         ..|+|++|+.++.+  .++++|++++++.+.     ++...+
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~  154 (345)
T cd08287          75 VKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVM  154 (345)
T ss_pred             cCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHH
Confidence            999999987 211                         12889999999975  999999999983222     122457


Q ss_pred             HHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHH
Q 017064          174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNV  252 (378)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i  252 (378)
                      .+||+++. .+++.+|++|+|.|+ |++|++++|+|+++|++++++++   .++++.+.++++|++++++++... .+.+
T Consensus       155 ~~a~~~~~-~~~~~~g~~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~---~~~~~~~~~~~~ga~~v~~~~~~~~~~~i  229 (345)
T cd08287         155 GTGHHAAV-SAGVRPGSTVVVVGD-GAVGLCAVLAAKRLGAERIIAMS---RHEDRQALAREFGATDIVAERGEEAVARV  229 (345)
T ss_pred             HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHcCCceEecCCcccHHHHH
Confidence            88999885 588999999999874 99999999999999997555553   366788888999999999987653 4667


Q ss_pred             HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      .+.+++.+ +|+++|++|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+...          ...+
T Consensus       230 ~~~~~~~~-~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~  297 (345)
T cd08287         230 RELTGGVG-ADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPA----------PVRR  297 (345)
T ss_pred             HHhcCCCC-CCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecC----------CcHH
Confidence            77777666 9999999986 466899999999999999985542 334454456778999887432          2345


Q ss_pred             HHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          332 MIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++++++++.++.+++   .++.|+++++++|++.+.+.+. . |++|+.
T Consensus       298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~-k~~~~~  345 (345)
T cd08287         298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-I-KVLLRP  345 (345)
T ss_pred             HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-e-EEEeCC
Confidence            7888999999999986   3467999999999999887654 3 999863

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.5e-36  Score=281.92  Aligned_cols=293  Identities=25%  Similarity=0.356  Sum_probs=236.3

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhc-ccCCC-CCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP---  137 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---  137 (378)
                      +.+++.+.|.++++||+|||.++++|++|..... +..+. ...+|.++|+|++|+|+++|+++++|++||+|++.+   
T Consensus         9 ~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~   88 (339)
T cd08232           9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRP   88 (339)
T ss_pred             eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCc
Confidence            8899999999999999999999999999988763 32211 113577899999999999999999999999998731   


Q ss_pred             ----------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCC
Q 017064          138 ----------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSG  189 (378)
Q Consensus       138 ----------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g  189 (378)
                                                  ...|+|++|++++.+.++++|+++++++|+. ..++++||+++.....+ +|
T Consensus        89 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~  166 (339)
T cd08232          89 CGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AG  166 (339)
T ss_pred             CCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CC
Confidence                                        1248999999999999999999999999876 56788999999876666 99


Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      ++|||.|+ |++|++++|+|+++|+ +++++.    .++++.+.++++|+++++++++.+   +.....+.+++|+++||
T Consensus       167 ~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~----~s~~~~~~~~~~g~~~vi~~~~~~---~~~~~~~~~~vd~vld~  238 (339)
T cd08232         167 KRVLVTGA-GPIGALVVAAARRAGAAEIVATD----LADAPLAVARAMGADETVNLARDP---LAAYAADKGDFDVVFEA  238 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCCEEEcCCchh---hhhhhccCCCccEEEEC
Confidence            99999875 8999999999999999 666665    467777888899999999877644   22333222349999999


Q ss_pred             CCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc
Q 017064          269 VGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY  347 (378)
Q Consensus       269 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~  347 (378)
                      .|+ ..++.++++|+++|+++.+|... .+...++..++.+++++.+...           ..+.+++++++++++.+++
T Consensus       239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~  306 (339)
T cd08232         239 SGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFR-----------FDDEFAEAVRLLAAGRIDV  306 (339)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEec-----------CHHHHHHHHHHHHcCCCCc
Confidence            996 56789999999999999998543 2333344445668888877642           1245778889999998864


Q ss_pred             c---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          348 D---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       348 ~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .   .+.|++++++++++.+.+++..| |+|+++
T Consensus       307 ~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~  339 (339)
T cd08232         307 RPLITAVFPLEEAAEAFALAADRTRSV-KVQLSF  339 (339)
T ss_pred             hhheeEEecHHHHHHHHHHHHhCCCce-eEEEeC
Confidence            3   46799999999999999888888 999975

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=5.9e-36  Score=279.72  Aligned_cols=301  Identities=25%  Similarity=0.345  Sum_probs=247.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+++.    +.+.+.+.|++.++||+|||+++++|+.|+....|.++.  .+|.++|+|++|+|+.+|++++.+
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~   74 (334)
T cd08234           1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGF   74 (334)
T ss_pred             CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCC
Confidence            68898887763    889999999999999999999999999999998887654  367899999999999999999999


Q ss_pred             CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||+|++...                          ..|+|++|++++.++++++|+++++.+++.+ ..+.++++++ 
T Consensus        75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-  152 (334)
T cd08234          75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-  152 (334)
T ss_pred             CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence            99999987211                          2489999999999999999999999998876 6788999998 


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      ..+++.+|++|||+|+ |.+|++++++|+++|++ ++++.    .++++.+.++++|++.+++.+......- +.+.+.+
T Consensus       153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~  226 (334)
T cd08234         153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAE----PNEEKLELAKKLGATETVDPSREDPEAQ-KEDNPYG  226 (334)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCeEEecCCCCCHHHH-HHhcCCC
Confidence            6689999999999975 99999999999999998 66665    4778888889999998888766543222 4445544


Q ss_pred             CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                       +|++|||+|. .....++++++++|+++.+|.... ...+++...++.+++++.+....           .+.++++++
T Consensus       227 -vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  294 (334)
T cd08234         227 -FDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-----------PYTFPRAIA  294 (334)
T ss_pred             -CcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-----------HHHHHHHHH
Confidence             9999999985 456889999999999999985443 22334444455578888776431           245788889


Q ss_pred             HHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          339 LAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       339 ~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +++++.+++.   ..+|++++++++++.+.+ ...+ |+|+
T Consensus       295 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-k~vi  333 (334)
T cd08234         295 LLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGAL-KVVV  333 (334)
T ss_pred             HHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCce-EEEe
Confidence            9999998753   467999999999999998 7777 8886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5.5e-36  Score=280.77  Aligned_cols=307  Identities=22%  Similarity=0.269  Sum_probs=243.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC-C-CCCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-P-VRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++.+.+++..   +++.+.|.|.++++||+||+.++++|++|+.++.+.. . ....+|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~   77 (341)
T PRK05396          1 MKALVKLKAEPG---LWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT   77 (341)
T ss_pred             CceEEEecCCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence            688888877642   8999999999999999999999999999999766532 1 1124678899999999999999999


Q ss_pred             CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      .+++||+|++.+.                          ..|+|++|+.++.++++++|+++++.+++.+ ..+.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~  156 (341)
T PRK05396         78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT  156 (341)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence            9999999998621                          2489999999999999999999999988755 456666665


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhc
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA  257 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~  257 (378)
                      +..  ...+|++|+|.|+ |++|++++|+|+++|++ ++++.    .++++.+.++++|+++++++++.+ .+.++++++
T Consensus       157 ~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  229 (341)
T PRK05396        157 ALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITD----VNEYRLELARKMGATRAVNVAKEDLRDVMAELGM  229 (341)
T ss_pred             HHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHhCCcEEecCccccHHHHHHHhcC
Confidence            533  3468999999875 99999999999999995 55553    477888899999999999887654 355667776


Q ss_pred             CCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          258 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       258 ~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                      +.+ +|++|||.|+ ..++.++++++++|+++.+|... ...+++...+..+++++.++....         ..+.+..+
T Consensus       230 ~~~-~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~  298 (341)
T PRK05396        230 TEG-FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPP-GDMAIDWNKVIFKGLTIKGIYGRE---------MFETWYKM  298 (341)
T ss_pred             CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCCcccHHHHhhcceEEEEEEccC---------ccchHHHH
Confidence            655 9999999986 45688999999999999998543 233444566777888887764211         11345567


Q ss_pred             HHHHHcC-Ccccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREG-KLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g-~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++.++ ++.+. .+.|+++++++|++.+.+++ .| |+|++|
T Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~g-k~vv~~  340 (341)
T PRK05396        299 SALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SG-KVILDW  340 (341)
T ss_pred             HHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-Cc-eEEEec
Confidence            7888888 34433 46799999999999999877 77 999976

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.7e-36  Score=278.41  Aligned_cols=300  Identities=25%  Similarity=0.313  Sum_probs=245.0

Q ss_pred             cceEEEcccCCCc-cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |+++++..++++. +.+.+.+.+.|.++++||+||+.++++|++|+....|..+. ...|.++|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   79 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR   79 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence            6888888887431 12777888888899999999999999999999998887654 246889999999999999999999


Q ss_pred             CCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      +++||+|++.+.                           ..|+|++|++++.+.++++|+++++.+++.+++++.|||++
T Consensus        80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  159 (329)
T cd08298          80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA  159 (329)
T ss_pred             CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence            999999986210                           14889999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      + ..++++++++|+|+|+ |++|++++++|++.|+++++++    .++++.+.++++|++++++.+..         .+.
T Consensus       160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~---------~~~  224 (329)
T cd08298         160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFT----RSGEHQELARELGADWAGDSDDL---------PPE  224 (329)
T ss_pred             H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEc----CChHHHHHHHHhCCcEEeccCcc---------CCC
Confidence            9 6799999999999985 9999999999999999999888    46788888899999888876542         222


Q ss_pred             CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      + +|+++++.+. .....++++++++|+++.+|........++.. .+.++..+.+....          ..+.++.+++
T Consensus       225 ~-vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~----------~~~~~~~~~~  292 (329)
T cd08298         225 P-LDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANL----------TRQDGEEFLK  292 (329)
T ss_pred             c-ccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCC----------CHHHHHHHHH
Confidence            3 9999998664 55689999999999999887432111112222 23456666665321          2245778889


Q ss_pred             HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +++++.+++.++.|+++++++|++.+.+++..| |+|+
T Consensus       293 l~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~  329 (329)
T cd08298         293 LAAEIPIKPEVETYPLEEANEALQDLKEGRIRG-AAVL  329 (329)
T ss_pred             HHHcCCCCceEEEEeHHHHHHHHHHHHcCCCcc-eeeC
Confidence            999999887778899999999999999999998 8874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1e-36  Score=286.72  Aligned_cols=320  Identities=28%  Similarity=0.299  Sum_probs=245.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCC--------------CCCCCCccCCCc
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------------VRPKVPAVGGYE  112 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e  112 (378)
                      ||++++..++++.+++++++.+.|.| +++||+|||.++++|++|.....|...              ...+.|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            68888888887654578889999988 599999999999999999998877421              012458899999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC--
Q 017064          113 GVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS--  188 (378)
Q Consensus       113 ~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~--  188 (378)
                      ++|+|+.+|++++++++||+|++...  ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+.+.+.+  
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  160 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN  160 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence            99999999999999999999998652  25899999999999999999999999999999999999999988777754  


Q ss_pred             --CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          189 --GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       189 --g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                        |++|+|+|++|++|++++++|+++|++|+++++    + ++.+.++++|++++++.......  ..++.+. ++|++|
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~----~-~~~~~~~~~g~~~~~~~~~~~~~--~~l~~~~-~vd~vi  232 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS----T-DAIPLVKSLGADDVIDYNNEDFE--EELTERG-KFDVIL  232 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC----c-chHHHHHHhCCceEEECCChhHH--HHHHhcC-CCCEEE
Confidence              999999999999999999999999999988772    2 46678888999998887653321  2222333 499999


Q ss_pred             eCCCCccHHHHHHhcccCCEEEEEecCCCCCc---cccchhhhhcCceEEEEechhhhc-----cccHHHHHHHHHHHHH
Q 017064          267 NCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI---TVSTSAFIFKDLSLKGFWLQKWLS-----SEKATECRNMIDYLLC  338 (378)
Q Consensus       267 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  338 (378)
                      |++|+.....++++++++|+++.+|.......   .+.... +..++++..........     ..........+.++++
T Consensus       233 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (350)
T cd08248         233 DTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGM-LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK  311 (350)
T ss_pred             ECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchh-hhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence            99999888899999999999999985432111   010000 00111110000000000     0000112467888999


Q ss_pred             HHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          339 LAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       339 ~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      ++++|.+.+. ++.|++++++++++.+.+++..+ |++++
T Consensus       312 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~vv~~  350 (350)
T cd08248         312 LVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARG-KTVIK  350 (350)
T ss_pred             HHhCCCEecccceeecHHHHHHHHHHHhcCCCce-EEEeC
Confidence            9999998865 56899999999999999888877 88874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.1e-35  Score=279.00  Aligned_cols=294  Identities=24%  Similarity=0.289  Sum_probs=239.6

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhccc-CCCC-CCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP---  137 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---  137 (378)
                      +.+++.+.|.+.++||+|||.++++|+.|...+.+. .+.. ...|.++|+|++|+|+++|++++++++||+|++.+   
T Consensus        10 ~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   89 (343)
T cd05285          10 LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVP   89 (343)
T ss_pred             eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccC
Confidence            888999999999999999999999999999876422 2111 13567899999999999999999999999998621   


Q ss_pred             ------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEE
Q 017064          138 ------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIV  193 (378)
Q Consensus       138 ------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~Vl  193 (378)
                                              ...|+|++|++++++.++++|+++++.+++.+ .++.+||+++ ..+++++|++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vl  167 (343)
T cd05285          90 CRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVL  167 (343)
T ss_pred             CCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEE
Confidence                                    12489999999999999999999999999877 4788899987 669999999999


Q ss_pred             EeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc----HHHHHHHhcCCCCCcEEEeC
Q 017064          194 QNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       194 V~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~----~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |+|+ |++|++++|+|+++|++ +++++    .++++.+.++++|++++++.++.+    .+.+.+.+++.+ +|++|||
T Consensus       168 I~g~-g~vG~~a~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~-~d~vld~  241 (343)
T cd05285         168 VFGA-GPIGLLTAAVAKAFGATKVVVTD----IDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG-PDVVIEC  241 (343)
T ss_pred             EECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC-CCEEEEC
Confidence            9876 89999999999999998 66666    467888888999999999887654    566777777755 9999999


Q ss_pred             CCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc
Q 017064          269 VGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY  347 (378)
Q Consensus       269 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~  347 (378)
                      +|+. ..+.++++++++|+++.+|.... ...++......+++++.++...           .+.+++++++++++.+++
T Consensus       242 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~  309 (343)
T cd05285         242 TGAESCIQTAIYATRPGGTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY-----------ANTYPTAIELLASGKVDV  309 (343)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC-----------hHHHHHHHHHHHcCCCCc
Confidence            9986 67899999999999999985432 2334444566677877775421           156778889999998753


Q ss_pred             ---cceeeccccHHHHHHHHHccCC-CCCceEee
Q 017064          348 ---DMELVPFNNFQTALSKALGLHG-SQPKQVIK  377 (378)
Q Consensus       348 ---~~~~~~l~~~~~a~~~~~~~~~-~g~kvvv~  377 (378)
                         ..+.|+++++.+|++.+.+++. .+ |++|.
T Consensus       310 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~-k~~~~  342 (343)
T cd05285         310 KPLITHRFPLEDAVEAFETAAKGKKGVI-KVVIE  342 (343)
T ss_pred             hHhEEEEEeHHHHHHHHHHHHcCCCCee-EEEEe
Confidence               2467999999999999998753 46 99873

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-35  Score=283.05  Aligned_cols=305  Identities=20%  Similarity=0.269  Sum_probs=241.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC------CCCCCCCccCCCceeEEEEEec
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      +...++..+ +    +++.++|.|.+++++|+|||.++++|++|+..+.+..      +...++|.++|||++|+|+++|
T Consensus        29 ~~~~~~~~~-~----~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG  103 (384)
T cd08265          29 LGSKVWRYP-E----LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTG  103 (384)
T ss_pred             ceeEEEeCC-C----EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEEC
Confidence            455555532 2    8999999999999999999999999999998876321      2223468899999999999999


Q ss_pred             CCCCCCCCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCC-------CCHhhhhh
Q 017064          122 SAVTRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKD-------SPMEYAAT  168 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~-------~~~~~aa~  168 (378)
                      ++++.|++||+|++.+                          ...|+|++|+.++++.++++|++       +++. +++
T Consensus       104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~  182 (384)
T cd08265         104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGA  182 (384)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-Hhh
Confidence            9999999999998621                          11489999999999999999986       3455 556


Q ss_pred             ccccHHHHHHHHHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          169 IIVNPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       169 ~~~~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ++.++++||+++... +++++|++|+|+|+ |++|++++|+|+++|+ +++++.    .++++.+.++++|+++++++++
T Consensus       183 ~~~~~~ta~~al~~~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~----~~~~~~~~~~~~g~~~~v~~~~  257 (384)
T cd08265         183 LVEPTSVAYNGLFIRGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFE----ISEERRNLAKEMGADYVFNPTK  257 (384)
T ss_pred             hhhHHHHHHHHHHhhcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcccc
Confidence            667889999999665 68999999999965 9999999999999999 577776    4667888999999999998764


Q ss_pred             ----ccHHHHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhh
Q 017064          247 ----LEVKNVKGLLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKW  320 (378)
Q Consensus       247 ----~~~~~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (378)
                          .+...+++++++.+ +|+|+||+|++  .+..++++++++|+++.+|.... ...++...+..+..++.+....  
T Consensus       258 ~~~~~~~~~v~~~~~g~g-vDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~--  333 (384)
T cd08265         258 MRDCLSGEKVMEVTKGWG-ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGH--  333 (384)
T ss_pred             cccccHHHHHHHhcCCCC-CCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeecc--
Confidence                23466888887766 99999999964  56889999999999999985432 2333445555667777776421  


Q ss_pred             hccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          321 LSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                             .....+++++++++++.+++.   ++.|+++++++|++.+.++ ..+ |+|+
T Consensus       334 -------~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-kvvv  383 (384)
T cd08265         334 -------SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDG-KITI  383 (384)
T ss_pred             -------CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCc-eEEe
Confidence                   122457889999999998863   4679999999999997654 566 8875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.3e-35  Score=278.91  Aligned_cols=307  Identities=23%  Similarity=0.263  Sum_probs=239.4

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +|+++++..++.    +++.+.+.|.+.++||+|||.++++|++|+..+.+....  ...+|.++|||++|+|+++|+++
T Consensus        17 ~~~~~~~~~~~~----l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         17 ENMAAWLVGVNT----LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             ccceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            344444444443    788888888899999999999999999999988763211  11257789999999999999999


Q ss_pred             CCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHH
Q 017064          125 TRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL  177 (378)
Q Consensus       125 ~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  177 (378)
                      ++|++||+|++.+                           ...|+|++|+.++.+.++++|+++++.++++.. ...++|
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~  171 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGV  171 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHH
Confidence            9999999998621                           114899999999999999999999999988632 355688


Q ss_pred             HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc---ccHHHHHH
Q 017064          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ---LEVKNVKG  254 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~---~~~~~i~~  254 (378)
                      +++ ...++.+|++|+|+|+ |++|++++|+|+++|++++++++   .++++.+.++++|++.+++.+.   ...+.+.+
T Consensus       172 ~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  246 (364)
T PLN02702        172 HAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVD---VDDERLSVAKQLGADEIVLVSTNIEDVESEVEE  246 (364)
T ss_pred             HHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEEecCcccccHHHHHHH
Confidence            887 5588999999999975 99999999999999998666554   3678888889999999876532   22344444


Q ss_pred             H--hcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          255 L--LANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       255 ~--~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      +  ..+. ++|++|||+|+ ..+..++++++++|+++.+|.... ...+....+..+++++.+++..           ..
T Consensus       247 ~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~  313 (364)
T PLN02702        247 IQKAMGG-GIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRY-----------RN  313 (364)
T ss_pred             HhhhcCC-CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccC-----------hH
Confidence            3  2233 49999999995 567899999999999999985433 2334555677789998886532           13


Q ss_pred             HHHHHHHHHHcCCccc---cceeecc--ccHHHHHHHHHccCCCCCceEee
Q 017064          332 MIDYLLCLAREGKLKY---DMELVPF--NNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~---~~~~~~l--~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++.++++++++.+.+   ..+.|++  +++++|++.+.+++..+ |+||.
T Consensus       314 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~-kvv~~  363 (364)
T PLN02702        314 TWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAI-KVMFN  363 (364)
T ss_pred             HHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCce-EEEEe
Confidence            5677889999998863   2456555  79999999999888888 99986

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-35  Score=276.46  Aligned_cols=288  Identities=21%  Similarity=0.253  Sum_probs=234.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.++++    +.+++++.|.++++||+|||.++++|++|.....|..+    .|.++|||++|+|+++|++   +
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~   69 (319)
T cd08242           1 MKALVLDGGLD----LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---E   69 (319)
T ss_pred             CeeEEEeCCCc----EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---C
Confidence            68899987553    89999999999999999999999999999999888654    4789999999999999987   6


Q ss_pred             CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|...+                           ...|+|++|++++.++++++|+++++++++.+ ....++|..+
T Consensus        70 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~  148 (319)
T cd08242          70 LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL  148 (319)
T ss_pred             CCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence            7999997321                           12589999999999999999999999988864 3344566555


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                       ...++++|++|||+|+ |.+|++++|+|+.+|+++++++    .++++.+.++++|++.+++++..        +.+.+
T Consensus       149 -~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~  214 (319)
T cd08242         149 -EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVG----RHSEKLALARRLGVETVLPDEAE--------SEGGG  214 (319)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEeCcccc--------ccCCC
Confidence             5688999999999975 9999999999999999988887    57889999999999988876532        33434


Q ss_pred             CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (378)
                       +|++|||+|+ ..+..++++++++|+++..+... ....++...+..++.++.+....             .+++++++
T Consensus       215 -~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~  279 (319)
T cd08242         215 -FDVVVEATGSPSGLELALRLVRPRGTVVLKSTYA-GPASFDLTKAVVNEITLVGSRCG-------------PFAPALRL  279 (319)
T ss_pred             -CCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC-CCCccCHHHheecceEEEEEecc-------------cHHHHHHH
Confidence             9999999987 45688999999999999876432 23445555667788888876432             16678899


Q ss_pred             HHcCCcc--cc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          340 AREGKLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       340 l~~g~~~--~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++  +. .+.|+++++++|++.++++. .+ |+||+.
T Consensus       280 ~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~-k~vi~~  319 (319)
T cd08242         280 LRKGLVDVDPLITAVYPLEEALEAFERAAEPG-AL-KVLLRP  319 (319)
T ss_pred             HHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ce-EEEeCC
Confidence            9999984  33 47899999999999998665 56 999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2.2e-35  Score=275.34  Aligned_cols=310  Identities=25%  Similarity=0.323  Sum_probs=248.7

Q ss_pred             ceEEEcccCC---CccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEecCC
Q 017064           49 KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        49 ~a~~~~~~~~---~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ++|.+....+   ..+.+++++.+.|.+.+++|+|||.++++|+.|.....+......  ..+.++|+|++|+|+++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            5555544431   223488999999999999999999999999988765554321111  12457899999999999964


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccC-CceEEcCCCCC--Hhhhhh-ccccHHHHHHHHHHHhccCCCCEEEEeCCCc
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVSKDSP--MEYAAT-IIVNPLTALRMLEDFTTLNSGDSIVQNGATS  199 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~-~~~~~iP~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g  199 (378)
                        ++++||+|+++    ++|++|+.++. +.++++|++++  +.++++ +++++.|||+++...+.+.++++|||+|++|
T Consensus        83 --~~~~Gd~V~~~----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  156 (329)
T cd05288          83 --DFKVGDLVSGF----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAG  156 (329)
T ss_pred             --CCCCCCEEecc----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcc
Confidence              79999999976    57999999999 99999999995  555555 8889999999998878899999999999989


Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKV  277 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~  277 (378)
                      ++|++++|+|++.|+++++++    .++++.+.+++ +|++++++.++. ..+.+.+.++ . ++|++|||+|+..+..+
T Consensus       157 ~ig~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~d~vi~~~g~~~~~~~  230 (329)
T cd05288         157 AVGSVVGQIAKLLGARVVGIA----GSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-D-GIDVYFDNVGGEILDAA  230 (329)
T ss_pred             hHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-C-CceEEEEcchHHHHHHH
Confidence            999999999999999999888    46778888887 999999988764 3455666664 3 49999999999888999


Q ss_pred             HHhcccCCEEEEEecCCCCCcc-----ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-cee
Q 017064          278 LKFLSQGGTMVTYGGMSKKPIT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MEL  351 (378)
Q Consensus       278 ~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~  351 (378)
                      +++++++|+++.+|........     .+....+.+++++.++....+     .....+.+.++++++.+|.+++. ...
T Consensus       231 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~  305 (329)
T cd05288         231 LTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDY-----ADRFPEALAELAKWLAEGKLKYREDVV  305 (329)
T ss_pred             HHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhh-----HHHHHHHHHHHHHHHHCCCcccccccc
Confidence            9999999999999865433221     224455678899888765432     12345778889999999999865 456


Q ss_pred             eccccHHHHHHHHHccCCCCCceEe
Q 017064          352 VPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       352 ~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +++++++++++.+.+++..| |+|+
T Consensus       306 ~~l~~~~~a~~~~~~~~~~g-kvvv  329 (329)
T cd05288         306 EGLENAPEAFLGLFTGKNTG-KLVV  329 (329)
T ss_pred             ccHHHHHHHHHHHhcCCCcc-ceeC
Confidence            89999999999999888888 8874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=3.3e-35  Score=270.42  Aligned_cols=298  Identities=25%  Similarity=0.306  Sum_probs=247.5

Q ss_pred             CCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC-CCCccccccee
Q 017064           70 PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGTWQSYVV  148 (378)
Q Consensus        70 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~G~~~~~~~  148 (378)
                      .|.+.+++|+||+.++++|+.|+....+.++..+.+|.++|+|++|+|+++|+++.++++||+|++.. ...|+|++|+.
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            46788999999999999999999998887654445688999999999999999999999999999874 23589999999


Q ss_pred             ccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 017064          149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE  228 (378)
Q Consensus       149 ~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~  228 (378)
                      ++.+.++++|+++++++++.++..+++||+++. ...+++|++|+|+++++++|++++|+|+++|+++++++    .+++
T Consensus        82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~----~~~~  156 (303)
T cd08251          82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATA----SSDD  156 (303)
T ss_pred             ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEc----CCHH
Confidence            999999999999999999999999999999985 58999999999999999999999999999999999888    4677


Q ss_pred             HHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCC-ccccchhhh
Q 017064          229 AKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFI  306 (378)
Q Consensus       229 ~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~  306 (378)
                      +.+.++++|++.+++....+ ...+.+.+++.+ +|+++|++++.....++++++++|+++.++...... ..+.... +
T Consensus       157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~  234 (303)
T cd08251         157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRG-VDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-L  234 (303)
T ss_pred             HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH-h
Confidence            88888999999999877644 456777777666 999999999888889999999999999998543211 1222222 3


Q ss_pred             hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      .+++.+....+..+.. ..+....+.+.++.+++.+|.+++. ++.|++++++++++.+.+++..+ |+++
T Consensus       235 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~iv~  303 (303)
T cd08251         235 SNNQSFHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIG-KVVV  303 (303)
T ss_pred             hcCceEEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcc-eEeC
Confidence            4556665555433322 2344566778889999999998865 57899999999999999988888 8874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.6e-35  Score=270.84  Aligned_cols=318  Identities=26%  Similarity=0.318  Sum_probs=258.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.+++. .+.+.+++.+.|.+.+++|+|||.++++|+.|+....+..... ..|.++|||++|+|+.+|+++..+
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   78 (325)
T cd08271           1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGW   78 (325)
T ss_pred             CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcC
Confidence            78999998884 1228999999999999999999999999999998877654321 236789999999999999999999


Q ss_pred             CCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          128 APGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       128 ~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      ++||+|++...  ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+.+.+.+|++|+|+|+++++|+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~  158 (325)
T cd08271          79 KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFA  158 (325)
T ss_pred             CCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHH
Confidence            99999998751  1489999999999999999999999999999999999999998888999999999999989999999


Q ss_pred             HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG  284 (378)
Q Consensus       206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~  284 (378)
                      +++|++.|+++++++     ++++.+.+..+|++.+++..... ...+++.+++.+ +|++++|+++......+++++++
T Consensus       159 ~~~a~~~g~~v~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~  232 (325)
T cd08271         159 VQLAKRAGLRVITTC-----SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRG-VDAVLDTVGGETAAALAPTLAFN  232 (325)
T ss_pred             HHHHHHcCCEEEEEE-----cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCC-CcEEEECCCcHhHHHHHHhhccC
Confidence            999999999988876     34666788889999998876543 456777777666 99999999998778899999999


Q ss_pred             CEEEEEecCCCCCccccchhhhhcCceEEEEechhhhcccc---HHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHH
Q 017064          285 GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK---ATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTA  360 (378)
Q Consensus       285 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a  360 (378)
                      |+++.++......    ....+.+++.+....+........   .....+.+.+++++++++.+++. ++.|+++++.++
T Consensus       233 G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a  308 (325)
T cd08271         233 GHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEA  308 (325)
T ss_pred             CEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHH
Confidence            9999987443221    112233445554444322211111   13456778889999999998764 578999999999


Q ss_pred             HHHHHccCCCCCceEeeC
Q 017064          361 LSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       361 ~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.+.+++..+ |+++++
T Consensus       309 ~~~~~~~~~~~-kiv~~~  325 (325)
T cd08271         309 LRALKDRHTRG-KIVVTI  325 (325)
T ss_pred             HHHHHcCCccc-eEEEEC
Confidence            99999888888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=4.5e-35  Score=273.35  Aligned_cols=302  Identities=26%  Similarity=0.305  Sum_probs=250.1

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++++.+++..   +++.+.|.|.+.+++|+|++.++++|++|.....|..+. ..+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~   76 (330)
T cd08245           1 KAAVVHAAGGP---LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRK   76 (330)
T ss_pred             CeEEEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccc
Confidence            57778777543   889999999999999999999999999999998886643 24678999999999999999999999


Q ss_pred             CCCEEeeCC--------------------------C-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          129 PGDWVIPSP--------------------------P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       129 ~Gd~V~~~~--------------------------~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      +||+|+..+                          . ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          77 VGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             cCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999998421                          0 2488999999999999999999999999999999999999997


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      . ..+.++++|||+|+ |++|++++++|+++|++|++++    .++++.+.++++|++.+++....+...  . .. . +
T Consensus       157 ~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-~~-~-~  225 (330)
T cd08245         157 D-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAIT----RSPDKRELARKLGADEVVDSGAELDEQ--A-AA-G-G  225 (330)
T ss_pred             h-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhCCcEEeccCCcchHH--h-cc-C-C
Confidence            6 78999999999976 7799999999999999999888    477888888899999998766543211  1 22 2 4


Q ss_pred             CcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064          262 PALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA  340 (378)
Q Consensus       262 ~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (378)
                      +|++|||++. .....++++++++|+++.++.........+...++.++.++.++....          ...++++++++
T Consensus       226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll  295 (330)
T cd08245         226 ADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG----------RADLQEALDFA  295 (330)
T ss_pred             CCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC----------HHHHHHHHHHH
Confidence            9999999875 566889999999999999985433333333445667888888775431          25677888999


Q ss_pred             HcCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          341 REGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       341 ~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      .++.+++.++.|+++++.++++.+.+++..+ |+|+
T Consensus       296 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~  330 (330)
T cd08245         296 AEGKVKPMIETFPLDQANEAYERMEKGDVRF-RFVL  330 (330)
T ss_pred             HcCCCcceEEEEcHHHHHHHHHHHHcCCCCc-ceeC
Confidence            9999987778899999999999999999888 8875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-35  Score=271.83  Aligned_cols=296  Identities=21%  Similarity=0.227  Sum_probs=241.8

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhh-cccCCCC-CCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCC
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS  140 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~  140 (378)
                      +++.+++.|.+.++||+|++.++++|+.|+..+ .|..+.. +..|.++|+|++|+|+.+|+++..+++||+|++...  
T Consensus         7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--   84 (312)
T cd08269           7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSG--   84 (312)
T ss_pred             eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecC--
Confidence            888999999999999999999999999999887 6654322 124788999999999999999999999999998764  


Q ss_pred             cccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEE
Q 017064          141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINI  219 (378)
Q Consensus       141 G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~  219 (378)
                      |+|++|+.++.+.++++|+++  ..++....++.++++++. ..++++|++|+|+|+ |++|++++|+|+++|++ ++++
T Consensus        85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~  160 (312)
T cd08269          85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI  160 (312)
T ss_pred             CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence            899999999999999999998  233222256788999887 688999999999975 99999999999999999 8777


Q ss_pred             ecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCC
Q 017064          220 IRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKP  297 (378)
Q Consensus       220 ~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~  297 (378)
                      .    ..+++.++++.+|++++++.+.. ....+.+++++.+ +|+++||.|+. ....++++++++|+++.+|......
T Consensus       161 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~  235 (312)
T cd08269         161 D----RRPARLALARELGATEVVTDDSEAIVERVRELTGGAG-ADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGP  235 (312)
T ss_pred             C----CCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCC
Confidence            6    46778888899999999886654 4466777777666 99999999864 5688999999999999998554333


Q ss_pred             ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCC-CCCc
Q 017064          298 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHG-SQPK  373 (378)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~-~g~k  373 (378)
                      ..+++..+..+++++.++...      ++....+.+++++++++++.+++   ..+.|++++++++++.+.+++. .+ |
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~  308 (312)
T cd08269         236 RPVPFQTWNWKGIDLINAVER------DPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFI-K  308 (312)
T ss_pred             cccCHHHHhhcCCEEEEeccc------CccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCce-E
Confidence            444555667788887776432      12234577889999999999886   2467999999999999999875 45 8


Q ss_pred             eEe
Q 017064          374 QVI  376 (378)
Q Consensus       374 vvv  376 (378)
                      +++
T Consensus       309 ~~~  311 (312)
T cd08269         309 GVI  311 (312)
T ss_pred             EEe
Confidence            886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.8e-35  Score=277.21  Aligned_cols=318  Identities=26%  Similarity=0.323  Sum_probs=238.2

Q ss_pred             ceEEEcccCCCccceEEeeeCCCC-CCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC-C
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT-R  126 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~  126 (378)
                      |++++.+++++.. ++..+.|.|. +++++|+||+.++++|++|+....+........|.++|+|++|+|+++|++++ .
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           2 KALTFKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             ceEEEecCCCcce-eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            6788888887743 4444455553 49999999999999999999877542211112367899999999999999998 8


Q ss_pred             CCCCCEEeeCCC----CCcccccceeccCC----ceEEcCCCCCHhhhhhccccHHHHHHHHHHHh-ccCCCCEEEEeCC
Q 017064          127 LAPGDWVIPSPP----SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGA  197 (378)
Q Consensus       127 ~~~Gd~V~~~~~----~~G~~~~~~~~~~~----~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlV~g~  197 (378)
                      |++||+|++...    ..|+|++|++++.+    .++++|+++++.+++.+++++.|||+++...+ .+++|++|+|+|+
T Consensus        81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga  160 (352)
T cd08247          81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG  160 (352)
T ss_pred             CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence            999999998752    14899999999987    79999999999999999999999999998877 7999999999999


Q ss_pred             CchHHHHHHHHHHHc-CC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc----HHHHHHHhc-CCCCCcEEEeCCC
Q 017064          198 TSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLA-NLPEPALGFNCVG  270 (378)
Q Consensus       198 ~g~~G~~av~la~~~-g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~----~~~i~~~~~-~~g~~Dvvid~~g  270 (378)
                      ++++|++++++|++. |. +++++.     ++++.+.++++|++++++.++..    ..++.+.+. +.+ +|++|||+|
T Consensus       161 ~~~vg~~~~~~a~~~~~~~~v~~~~-----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g  234 (352)
T cd08247         161 STSVGRFAIQLAKNHYNIGTVVGTC-----SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK-FDLILDCVG  234 (352)
T ss_pred             CchHHHHHHHHHHhcCCcceEEEEe-----ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCC-ceEEEECCC
Confidence            999999999999987 45 455554     34445577899999999876543    445555444 444 999999999


Q ss_pred             C-ccHHHHHHhcc---cCCEEEEEecCCCCCccc---c-------chhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          271 G-NSASKVLKFLS---QGGTMVTYGGMSKKPITV---S-------TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       271 ~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                      + .....++++++   ++|+++.++.....+...   .       ....+.+++++........ . ..+.  .+.++.+
T Consensus       235 ~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~  310 (352)
T cd08247         235 GYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF-L-LDPN--ADWIEKC  310 (352)
T ss_pred             CHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEE-E-ecCC--HHHHHHH
Confidence            8 56688999999   999999875332211110   0       0011222322222211110 0 0111  2567888


Q ss_pred             HHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++.++.+++. .+.|+++++++|++.+++++..| |+|+++
T Consensus       311 ~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvi~~  352 (352)
T cd08247         311 AELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKG-KVVIKV  352 (352)
T ss_pred             HHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCC-cEEEeC
Confidence            899999998865 56899999999999999998888 999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.4e-34  Score=268.45  Aligned_cols=320  Identities=27%  Similarity=0.361  Sum_probs=263.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      |+++++..++.+.. +.+.+.+ |.+. +++++|++.++++|+.|+....|.+......|..+|||++|.|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~   78 (323)
T cd08241           1 MKAVVCKELGGPED-LVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTG   78 (323)
T ss_pred             CeEEEEecCCCcce-eEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            57888876655443 7777777 7666 5999999999999999999888766443345678999999999999999999


Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av  206 (378)
                      +++||+|++... .|++++|+.++.+.++++|+++++.+++.+...+.+||+++.....+.++++|+|+|++|++|++++
T Consensus        79 ~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~  157 (323)
T cd08241          79 FKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV  157 (323)
T ss_pred             CCCCCEEEEecC-CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence            999999999862 3899999999999999999999999999999899999999987789999999999999999999999


Q ss_pred             HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                      ++|++.|+++++++    .+.++.+.++++|++.+++....+ .+.+...+++.+ +|.+++|+|+.....++++++++|
T Consensus       158 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~g~~~~~~~~~~~~~~g  232 (323)
T cd08241         158 QLAKALGARVIAAA----SSEEKLALARALGADHVIDYRDPDLRERVKALTGGRG-VDVVYDPVGGDVFEASLRSLAWGG  232 (323)
T ss_pred             HHHHHhCCEEEEEe----CCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCC-cEEEEECccHHHHHHHHHhhccCC
Confidence            99999999999888    467788888889998888776643 356777777655 999999999977888999999999


Q ss_pred             EEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHH
Q 017064          286 TMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKA  364 (378)
Q Consensus       286 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~  364 (378)
                      +++.+|........+.....+.+++++.+.....+.. ..+....+.++++++++.++.+++. +..|++++++++++.+
T Consensus       233 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (323)
T cd08241         233 RLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYAR-REPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRAL  311 (323)
T ss_pred             EEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccc-hhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHH
Confidence            9999985432211233434567899999887654422 2344556788889999999988765 5679999999999999


Q ss_pred             HccCCCCCceEee
Q 017064          365 LGLHGSQPKQVIK  377 (378)
Q Consensus       365 ~~~~~~g~kvvv~  377 (378)
                      .++...+ |++++
T Consensus       312 ~~~~~~~-~vvv~  323 (323)
T cd08241         312 ADRKATG-KVVLT  323 (323)
T ss_pred             HhCCCCC-cEEeC
Confidence            9888887 88864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5.3e-35  Score=274.06  Aligned_cols=307  Identities=27%  Similarity=0.330  Sum_probs=244.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC--CCCCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++.+..+++.   +.+.+.+.|.++++|++|||.++++|+.|...+.+..  ......|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~   77 (341)
T cd05281           1 MKAIVKTKAGPG---AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT   77 (341)
T ss_pred             CcceEEecCCCc---eEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence            688888877652   8889999999999999999999999999998765431  11123567899999999999999999


Q ss_pred             CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      .+++||+|++.+.                          ..|+|++|++++.++++++|++++++.+ +++..+.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~  156 (341)
T cd05281          78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHT  156 (341)
T ss_pred             CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHH
Confidence            9999999988521                          2488999999999999999999998554 566678888887


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      +.  ....+|++|||+|+ |++|++++|+|+++|+ +++++.    .++++.+.++++|++++++.+..+...+.+.+++
T Consensus       157 ~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  229 (341)
T cd05281         157 VL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASD----PNPYRLELAKKMGADVVINPREEDVVEVKSVTDG  229 (341)
T ss_pred             HH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCcceeeCcccccHHHHHHHcCC
Confidence            75  45678999999876 9999999999999999 577664    4778888889999999988765433377777776


Q ss_pred             CCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          259 LPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                      .+ +|++|||+|+. ....++++++++|+++.+|.... ...++. ..+..+++++.+....         ...+.+.++
T Consensus       230 ~~-vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  298 (341)
T cd05281         230 TG-VDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR---------KMFETWYQV  298 (341)
T ss_pred             CC-CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecC---------CcchhHHHH
Confidence            55 99999999874 56889999999999999985433 222232 2356678887776421         122456778


Q ss_pred             HHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++.+++.   ...+++++++++|+.+.+++ .| |+|++.
T Consensus       299 ~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~g-k~vv~~  341 (341)
T cd05281         299 SALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CG-KVVLYP  341 (341)
T ss_pred             HHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-Cc-eEEecC
Confidence            899999998642   45799999999999999998 88 999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-34  Score=265.49  Aligned_cols=277  Identities=24%  Similarity=0.350  Sum_probs=228.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||+++..+.++  ..+.+++++.|++.+++|+|||.++++|++|.....|.+.. ...|.++|+|++|+|+.+|++++.+
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   77 (306)
T cd08258           1 MKALVKTGPGP--GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGW   77 (306)
T ss_pred             CeeEEEecCCC--CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcC
Confidence            57777766442  23889999999999999999999999999999988876522 2357889999999999999999999


Q ss_pred             CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++...                           ..|+|++|++++.+.++++|+++++.+++ ++...++||+++
T Consensus        78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l  156 (306)
T cd08258          78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAV  156 (306)
T ss_pred             CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHH
Confidence            99999998642                           14899999999999999999999999887 677788999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~  259 (378)
                      ...+.+.++++|||.| +|++|++++|+|+++|++|+++...  +.+++.+.++++|++++ +++..+ ...+.+..++.
T Consensus       157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~  232 (306)
T cd08258         157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTE--KDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD  232 (306)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence            8888999999999977 5999999999999999998776433  35667788899999888 776544 35577766665


Q ss_pred             CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      + +|++|||+|+ .....++++++++|+++.+|........++...++.+++++.|+.+++.          ++++++++
T Consensus       233 ~-vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~  301 (306)
T cd08258         233 G-ADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP----------ASWETALR  301 (306)
T ss_pred             C-CCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch----------HhHHHHHH
Confidence            5 9999999975 5668899999999999999976533455677778889999999987532          45778888


Q ss_pred             HHHcC
Q 017064          339 LAREG  343 (378)
Q Consensus       339 ~l~~g  343 (378)
                      ++++|
T Consensus       302 ~~~~~  306 (306)
T cd08258         302 LLASG  306 (306)
T ss_pred             HHhcC
Confidence            88765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3e-34  Score=268.85  Aligned_cols=295  Identities=24%  Similarity=0.283  Sum_probs=235.5

Q ss_pred             eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC--CCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP---  137 (378)
Q Consensus        63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---  137 (378)
                      +++.+.|.|.++++||+|||.++++|+.|+..+.+...  ...++|.++|+|++|+|+.+|++++.+++||+|++..   
T Consensus        11 ~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   90 (340)
T TIGR00692        11 AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIV   90 (340)
T ss_pred             cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCC
Confidence            78889999999999999999999999999987655311  1113467899999999999999999999999998731   


Q ss_pred             -----------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEE
Q 017064          138 -----------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ  194 (378)
Q Consensus       138 -----------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV  194 (378)
                                             ...|+|++|++++++.++++|++++++++ +++..+.+|++++  ...+.+|++|+|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI  167 (340)
T TIGR00692        91 CGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLV  167 (340)
T ss_pred             CCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEE
Confidence                                   12489999999999999999999998655 5677888998886  355789999999


Q ss_pred             eCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-
Q 017064          195 NGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-  271 (378)
Q Consensus       195 ~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-  271 (378)
                      .|+ |++|++++|+|+++|++ |+++.    .++++.+.++++|++.+++....+ .+.+.+.+++.+ +|+++||+|+ 
T Consensus       168 ~~~-g~vg~~a~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~-~d~vld~~g~~  241 (340)
T TIGR00692       168 TGA-GPIGLMAIAVAKASGAYPVIVSD----PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG-VDVFLEMSGAP  241 (340)
T ss_pred             ECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCC-CCEEEECCCCH
Confidence            775 99999999999999997 66663    478888888999999998876543 456777766655 9999999886 


Q ss_pred             ccHHHHHHhcccCCEEEEEecCCCCCccccch-hhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc--c
Q 017064          272 NSASKVLKFLSQGGTMVTYGGMSKKPITVSTS-AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D  348 (378)
Q Consensus       272 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~  348 (378)
                      ..+...+++++++|+++.+|.... ...++.. .++.+++++.+....         ...+.+.+++++++++.+++  .
T Consensus       242 ~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~  311 (340)
T TIGR00692       242 KALEQGLQAVTPGGRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITGR---------HMFETWYTVSRLIQSGKLDLDPI  311 (340)
T ss_pred             HHHHHHHHhhcCCCEEEEEccCCC-CcccchhhhhhhcceEEEEEecC---------CchhhHHHHHHHHHcCCCChHHh
Confidence            456889999999999999985432 2223333 456677777665411         12245678899999999873  2


Q ss_pred             -ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          349 -MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       349 -~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       ++.++++++.++++.+.+++ .| |+|++|
T Consensus       312 ~~~~~~l~~~~~a~~~~~~~~-~g-kvvv~~  340 (340)
T TIGR00692       312 ITHKFKFDKFEKGFELMRSGQ-TG-KVILSL  340 (340)
T ss_pred             eeeeeeHHHHHHHHHHHhcCC-Cc-eEEEeC
Confidence             56799999999999999876 47 999986

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-33  Score=263.97  Aligned_cols=319  Identities=26%  Similarity=0.333  Sum_probs=255.6

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      |++.+...+.+.. +.+.+.+.|.+.+++|+||+.++++|++|.....|..+..+..|..+|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   79 (337)
T cd08275           1 RAVVLTGFGGLDK-LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFK   79 (337)
T ss_pred             CeEEEcCCCCccc-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCC
Confidence            3455555554433 777788878899999999999999999999988876544334577899999999999999999999


Q ss_pred             CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (378)
Q Consensus       129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l  208 (378)
                      +||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+|++|+|+|++|++|++++++
T Consensus        80 ~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~  158 (337)
T cd08275          80 VGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL  158 (337)
T ss_pred             CCCEEEEecC-CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence            9999999754 389999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM  287 (378)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~  287 (378)
                      |++.  .++.+++.  ..+++.+.++.+|++.+++..... ...++..++ . ++|+++||+|+.....++++++++|++
T Consensus       159 a~~~--~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~d~v~~~~g~~~~~~~~~~l~~~g~~  232 (337)
T cd08275         159 CKTV--PNVTVVGT--ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E-GVDIVLDALGGEDTRKSYDLLKPMGRL  232 (337)
T ss_pred             HHHc--cCcEEEEe--CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C-CceEEEECCcHHHHHHHHHhhccCcEE
Confidence            9998  33333322  245577788889999988877543 355666664 3 499999999998888999999999999


Q ss_pred             EEEecCCCCC---c-------------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ce
Q 017064          288 VTYGGMSKKP---I-------------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-ME  350 (378)
Q Consensus       288 v~~g~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~  350 (378)
                      +.+|.....+   .             .+.....+.+++++.++.....+. ..+ .....+.++++++.++.+++. ..
T Consensus       233 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~  310 (337)
T cd08275         233 VVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKPKIDS  310 (337)
T ss_pred             EEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCCceee
Confidence            9998543211   1             111234577899999887643222 122 334568889999999998865 46


Q ss_pred             eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          351 LVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .|++++++++++.+.+++..+ |+++++
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~-kvv~~~  337 (337)
T cd08275         311 VFPFEEVGEAMRRLQSRKNIG-KVVLTP  337 (337)
T ss_pred             EEcHHHHHHHHHHHHcCCCcc-eEEEeC
Confidence            799999999999999988888 999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3.5e-34  Score=264.21  Aligned_cols=304  Identities=26%  Similarity=0.358  Sum_probs=249.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC--CCCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      |+++++..++.... +.+.+.+.|.+++++|+|+|.++++|+.|+..+.|...  .....|..+|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGGPEV-LELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCCccc-eeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            67888887776543 66777777889999999999999999999998877542  1124578999999999999999999


Q ss_pred             CCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      .+++||+|+++..  ..|+|++|+.++...++++|+++++..++.+++.+.++|+++.....+.+|++|+|+|++|.+|+
T Consensus        80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~  159 (309)
T cd05289          80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS  159 (309)
T ss_pred             CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence            9999999998861  13899999999999999999999999999999999999999988777999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ  283 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~  283 (378)
                      ++++++++.|++++++++    ++ +.+.++++|++.+++....+..+   ...+.+ +|+++||+|+.....+++++++
T Consensus       160 ~~~~~a~~~g~~v~~~~~----~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~d~v~~~~~~~~~~~~~~~l~~  230 (309)
T cd05289         160 FAVQLAKARGARVIATAS----AA-NADFLRSLGADEVIDYTKGDFER---AAAPGG-VDAVLDTVGGETLARSLALVKP  230 (309)
T ss_pred             HHHHHHHHcCCEEEEEec----ch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCC-ceEEEECCchHHHHHHHHHHhc
Confidence            999999999999998873    44 67778889998888776544333   334434 9999999999988999999999


Q ss_pred             CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064          284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS  362 (378)
Q Consensus       284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~  362 (378)
                      +|+++.+|..... .  .  ..+.+++++....+.       +.  .+.+++++++++++.+++. ++.|++++++++++
T Consensus       231 ~g~~v~~g~~~~~-~--~--~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  296 (309)
T cd05289         231 GGRLVSIAGPPPA-E--Q--AAKRRGVRAGFVFVE-------PD--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHE  296 (309)
T ss_pred             CcEEEEEcCCCcc-h--h--hhhhccceEEEEEec-------cc--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHH
Confidence            9999999854321 1  1  334566666665431       11  4678889999999998764 56899999999999


Q ss_pred             HHHccCCCCCceEe
Q 017064          363 KALGLHGSQPKQVI  376 (378)
Q Consensus       363 ~~~~~~~~g~kvvv  376 (378)
                      .+.+++..+ |+|+
T Consensus       297 ~~~~~~~~~-kvv~  309 (309)
T cd05289         297 RLESGHARG-KVVL  309 (309)
T ss_pred             HHHhCCCCC-cEeC
Confidence            999888877 8774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=2e-33  Score=256.58  Aligned_cols=288  Identities=27%  Similarity=0.316  Sum_probs=241.3

Q ss_pred             CcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceE
Q 017064           76 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH  155 (378)
Q Consensus        76 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~  155 (378)
                      +||+||+.++++|++|+....|..+   .+|.++|||++|+|+++|+++..+++||+|++...  |+|++|+.++.+.++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~--g~~~~~~~~~~~~~~   75 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP--GAFATHVRVDARLVV   75 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec--CcccceEEechhheE
Confidence            5899999999999999998887652   35789999999999999999999999999998754  899999999999999


Q ss_pred             EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh
Q 017064          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG  235 (378)
Q Consensus       156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~  235 (378)
                      ++|+++++.+++.++++..++|+++.+...+++|++|+|+|++|++|++++++|+.+|+++++++    .++++.+.+++
T Consensus        76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~  151 (293)
T cd05195          76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATV----GSEEKREFLRE  151 (293)
T ss_pred             eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHH
Confidence            99999999999999999999999998888999999999999889999999999999999999888    46778888888


Q ss_pred             CC--CcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCce
Q 017064          236 LG--ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLS  311 (378)
Q Consensus       236 ~g--a~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~  311 (378)
                      +|  ++.+++.... ..+.+++.+.+.+ +|+++|++|+..+..++++++++|+++.+|...... ..+.. ..+.++++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~  229 (293)
T cd05195         152 LGGPVDHIFSSRDLSFADGILRATGGRG-VDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGM-RPFLRNVS  229 (293)
T ss_pred             hCCCcceEeecCchhHHHHHHHHhCCCC-ceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccch-hhhccCCe
Confidence            88  7888877654 3456777777666 999999999998899999999999999998543321 11222 23456778


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      +.......+.. ..+....+.+.+++++++++.+++. ...|++++++++++.+.+++..+ |+|+
T Consensus       230 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~ivv  293 (293)
T cd05195         230 FSSVDLDQLAR-ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIG-KVVL  293 (293)
T ss_pred             EEEEeHHHHhh-hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCc-eecC
Confidence            77776654422 2344456788899999999998865 45799999999999999988887 8774

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=256.54  Aligned_cols=232  Identities=21%  Similarity=0.236  Sum_probs=190.9

Q ss_pred             cCCCceeEEEEEecCCCC------CCCCCCEEeeCCC---------------------------------CCccccccee
Q 017064          108 VGGYEGVGEVYSVGSAVT------RLAPGDWVIPSPP---------------------------------SSGTWQSYVV  148 (378)
Q Consensus       108 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~---------------------------------~~G~~~~~~~  148 (378)
                      ++|||++|+|+++|++|+      +|++||||+..+.                                 .+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            579999999999999999      8999999975321                                 1389999999


Q ss_pred             ccCC-ceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCc
Q 017064          149 KDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGS  226 (378)
Q Consensus       149 ~~~~-~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~  226 (378)
                      ++++ +++++|+++++++++.+++.+.|+|+++.. ....+|++|||+|+ |++|++++|+||++|++ |+++.    .+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~----~~  154 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD----PS  154 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CC
Confidence            9997 799999999999999999989999999976 55679999999997 99999999999999998 65554    47


Q ss_pred             HHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCC-CCCccccchh
Q 017064          227 DEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS-KKPITVSTSA  304 (378)
Q Consensus       227 ~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~  304 (378)
                      ++|.++++++|++++++..+. .+.+.+++.+.+ +|++||++|.+ .++.++++++++|+++.+|... ..+.++++..
T Consensus       155 ~~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~  232 (280)
T TIGR03366       155 PDRRELALSFGATALAEPEVL-AERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQ  232 (280)
T ss_pred             HHHHHHHHHcCCcEecCchhh-HHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHH
Confidence            889999999999999987543 345666676655 99999999975 4689999999999999999653 2345677788


Q ss_pred             hhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC--Cccc---cceeeccccH
Q 017064          305 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG--KLKY---DMELVPFNNF  357 (378)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~~~~---~~~~~~l~~~  357 (378)
                      ++.+++++.|+....          .+.++++++++.++  ++++   .+++|||+|+
T Consensus       233 ~~~~~~~i~g~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       233 VVRRWLTIRGVHNYE----------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHhCCcEEEecCCCC----------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            889999999975421          24578888999874  4443   2567999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-32  Score=255.43  Aligned_cols=295  Identities=29%  Similarity=0.342  Sum_probs=231.8

Q ss_pred             EEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCC--C
Q 017064           64 KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--S  139 (378)
Q Consensus        64 ~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~  139 (378)
                      ++.+.+.|.+.++||+|++.++++|++|.....|..+.  ....|..+|||++|+|+++|+++.++++||+|++...  .
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~   94 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKG   94 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCC
Confidence            77888889999999999999999999999988775521  1124678999999999999999999999999998752  2


Q ss_pred             CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEE
Q 017064          140 SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI  219 (378)
Q Consensus       140 ~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~  219 (378)
                      .|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.+|++|+|+|++|++|++++++|+.+|++++++
T Consensus        95 ~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~  174 (319)
T cd08267          95 GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGV  174 (319)
T ss_pred             CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEE
Confidence            48999999999999999999999999999999999999999887779999999999999999999999999999999888


Q ss_pred             ecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc--HHHHHHhcccCCEEEEEecCCCCC
Q 017064          220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS--ASKVLKFLSQGGTMVTYGGMSKKP  297 (378)
Q Consensus       220 ~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~  297 (378)
                      +    .+ ++.+.++++|++++++.......  ...+.+.+ +|++++|+|+..  ....+..++++|+++.+|......
T Consensus       175 ~----~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~-~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~  246 (319)
T cd08267         175 C----ST-RNAELVRSLGADEVIDYTTEDFV--ALTAGGEK-YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL  246 (319)
T ss_pred             e----CH-HHHHHHHHcCCCEeecCCCCCcc--hhccCCCC-CcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc
Confidence            7    23 77788899999988876654322  34445544 999999999533  234444599999999998543322


Q ss_pred             cccc---chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCc
Q 017064          298 ITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPK  373 (378)
Q Consensus       298 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~k  373 (378)
                      ....   ..........+.....    .   +.  .+.+.+++++++++.+++. ++.|++++++++++.+.+++..+ |
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~----~---~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~-~  316 (319)
T cd08267         247 LLVLLLLPLTLGGGGRRLKFFLA----K---PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARG-K  316 (319)
T ss_pred             cccccccchhhccccceEEEEEe----c---CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCC-c
Confidence            1111   0111111222222211    1   11  4678889999999998864 56899999999999999888877 8


Q ss_pred             eEe
Q 017064          374 QVI  376 (378)
Q Consensus       374 vvv  376 (378)
                      +++
T Consensus       317 vvv  319 (319)
T cd08267         317 VVI  319 (319)
T ss_pred             EeC
Confidence            774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=1.3e-32  Score=250.90  Aligned_cols=282  Identities=28%  Similarity=0.361  Sum_probs=235.4

Q ss_pred             EEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCC
Q 017064           80 VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK  159 (378)
Q Consensus        80 V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~  159 (378)
                      |||.++++|++|+....|.++    .|.++|||++|+|+++|++++.+++||+|++...  |+|++|+.++.+.++++|+
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--g~~~~~~~~~~~~~~~~p~   75 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP--GSFATYVRTDARLVVPIPD   75 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--CceeeEEEccHHHeEECCC
Confidence            899999999999999887653    2578999999999999999999999999998754  8999999999999999999


Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-  238 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-  238 (378)
                      ++++.+++.+++.+.++|+++.....+.+|++|+|+|++|.+|++++++|++.|++|++++    .++++.+.++++|+ 
T Consensus        76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~  151 (288)
T smart00829       76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATA----GSPEKRDFLRELGIP  151 (288)
T ss_pred             CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCC
Confidence            9999999999999999999997778999999999999889999999999999999999888    47788888899998 


Q ss_pred             -cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceEEEE
Q 017064          239 -DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       239 -~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~  315 (378)
                       +.+++..... .+.+.+.+++++ +|+++|++|+.....++++++++|+++.+|..... ...++... +.+++++.+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~  229 (288)
T smart00829      152 DDHIFSSRDLSFADEILRATGGRG-VDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAV  229 (288)
T ss_pred             hhheeeCCCccHHHHHHHHhCCCC-cEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEE
Confidence             7888766543 456777777665 99999999987778899999999999999854321 12233333 4677888877


Q ss_pred             echhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      ....+.  ..+....+.+.+++++++++.+++. ++.|++++++++++.+.+++..+ |+++
T Consensus       230 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ivv  288 (288)
T smart00829      230 DLDALE--EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIG-KVVL  288 (288)
T ss_pred             EHHHhh--cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcc-eEeC
Confidence            665432  1333455677888999999988764 56799999999999999988777 8764

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=3.2e-31  Score=228.47  Aligned_cols=296  Identities=23%  Similarity=0.328  Sum_probs=238.7

Q ss_pred             EeeeCCC-CCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCC----CceeEEEEEecCCCCCCCCCCEEeeCCCC
Q 017064           65 MIELPPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGG----YEGVGEVYSVGSAVTRLAPGDWVIPSPPS  139 (378)
Q Consensus        65 ~~~~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  139 (378)
                      ..+.+++ ++++++|+||..|.+..|.-...+....+...-.|+.+|    ..++|+|++.  +..++++||.|.+..  
T Consensus        26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~--  101 (343)
T KOG1196|consen   26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV--  101 (343)
T ss_pred             eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--
Confidence            3344543 679999999999999998887766644443222344444    2678999994  567899999999874  


Q ss_pred             CcccccceeccCCc--eEEcCC--CCCH-hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 017064          140 SGTWQSYVVKDQSV--WHKVSK--DSPM-EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI  214 (378)
Q Consensus       140 ~G~~~~~~~~~~~~--~~~iP~--~~~~-~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~  214 (378)
                        +|.+|.+++++.  .+++|.  ++++ ....++.++.+|||.++.+.+..+.|++|+|.||+|++|+++.|+||.+|+
T Consensus       102 --gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc  179 (343)
T KOG1196|consen  102 --GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC  179 (343)
T ss_pred             --cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC
Confidence              699999998754  445444  3332 233456778999999999999999999999999999999999999999999


Q ss_pred             cEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc-cHH-HHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEe
Q 017064          215 HSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       215 ~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~-~~~-~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +|++++    ++.||.++++ ++|.|..+|+.++ +.+ .+++..+.  ++|+.||++|+...+..+..|+..||++.||
T Consensus       180 ~VVGsa----GS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~--GIDiYfeNVGG~~lDavl~nM~~~gri~~CG  253 (343)
T KOG1196|consen  180 YVVGSA----GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPE--GIDIYFENVGGKMLDAVLLNMNLHGRIAVCG  253 (343)
T ss_pred             EEEEec----CChhhhhhhHhccCCccceeccCccCHHHHHHHhCCC--cceEEEeccCcHHHHHHHHhhhhccceEeee
Confidence            999999    7999999997 5899999999987 654 45555554  4999999999999999999999999999999


Q ss_pred             cCCCCCcccc-----chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceee-ccccHHHHHHHHH
Q 017064          292 GMSKKPITVS-----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELV-PFNNFQTALSKAL  365 (378)
Q Consensus       292 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~l~~~~~a~~~~~  365 (378)
                      ..+.++.+.+     ...++.|++++.|+....+     .+.+.+.++.+..++++|+|+...+++ .|++.++|+.-|.
T Consensus       254 ~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~-----~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf  328 (343)
T KOG1196|consen  254 MISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY-----LDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLF  328 (343)
T ss_pred             eehhccccCCccccchhhheeeeEEeeeEEeech-----hhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHh
Confidence            8875543322     2456779999999765543     456788999999999999999886654 6999999999999


Q ss_pred             ccCCCCCceEeeC
Q 017064          366 GLHGSQPKQVIKF  378 (378)
Q Consensus       366 ~~~~~g~kvvv~~  378 (378)
                      ++++.| |.++.+
T Consensus       329 ~GkNvG-Kqiv~v  340 (343)
T KOG1196|consen  329 HGKNVG-KQLVKV  340 (343)
T ss_pred             ccCccc-ceEEEe
Confidence            999999 999864

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-31  Score=239.68  Aligned_cols=236  Identities=31%  Similarity=0.412  Sum_probs=200.4

Q ss_pred             cEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCC------------------
Q 017064           77 DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------  138 (378)
Q Consensus        77 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------------------  138 (378)
                      ||+|+|.++++|+.|+..+.|..+.....|.++|||++|+|+++|++++.|++||+|++...                  
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            68999999999999999998876523346789999999999999999999999999998762                  


Q ss_pred             ----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 017064          139 ----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI  214 (378)
Q Consensus       139 ----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~  214 (378)
                          ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++|||+|+++ +|+++++++++.|.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence                1589999999999999999999999999999999999999999877779999999999966 99999999999999


Q ss_pred             cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEec
Q 017064          215 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       215 ~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      +|++++    .++++.+.++++|++.+++..... .+.+. ...+.+ +|++|++++. .....++++++++|+++.++.
T Consensus       160 ~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~  233 (271)
T cd05188         160 RVIVTD----RSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGG-ADVVIDAVGGPETLAQALRLLRPGGRIVVVGG  233 (271)
T ss_pred             eEEEEc----CCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCC-CCEEEECCCCHHHHHHHHHhcccCCEEEEEcc
Confidence            999888    467888888999999988876654 33444 444444 9999999998 777899999999999999986


Q ss_pred             CCCCCccccchhhhhcCceEEEEechh
Q 017064          293 MSKKPITVSTSAFIFKDLSLKGFWLQK  319 (378)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (378)
                      .............+.+++++.++....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         234 TSGGPPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             CCCCCCcccHHHHHhcceEEEEeecCC
Confidence            554332223456678999999987653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=8.8e-31  Score=256.98  Aligned_cols=298  Identities=19%  Similarity=0.179  Sum_probs=249.4

Q ss_pred             eEEeeeCCC---CCCCCcEEEEEEeeccChhhhhhhcccCCCCC------CCCccCCCceeEEEEEecCCCCCCCCCCEE
Q 017064           63 IKMIELPPV---EVKENDVCVKMLAAPINPSDINRIEGVYPVRP------KVPAVGGYEGVGEVYSVGSAVTRLAPGDWV  133 (378)
Q Consensus        63 ~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  133 (378)
                      +++.+-|..   +..++.=+.-|.|+.||..|++...|+.+-..      .-...+|-|++|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            566666543   45667778899999999999999998865331      1236788899887          5679999


Q ss_pred             eeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC
Q 017064          134 IPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG  213 (378)
Q Consensus       134 ~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g  213 (378)
                      +++.+. -++++.+.++.++++.+|.+..+++|++.|+.+.||||+|..++..++|+++|||+++|++|++|+.+|.+.|
T Consensus      1499 M~mvpA-ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G 1577 (2376)
T KOG1202|consen 1499 MGMVPA-KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHG 1577 (2376)
T ss_pred             EEeeeh-hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcC
Confidence            998763 6789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH-HHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064          214 IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN-VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV  288 (378)
Q Consensus       214 ~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~-i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v  288 (378)
                      ++|+.++    ++.||+++++    ++-..++-|+++.+.+. +...|.|+| +|+|+++...+.++.+++||+-+|||.
T Consensus      1578 ~~VFTTV----GSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeEkLQASiRCLa~~GRFL 1652 (2376)
T KOG1202|consen 1578 CTVFTTV----GSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEEKLQASIRCLALHGRFL 1652 (2376)
T ss_pred             CEEEEec----CcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHHHHHHHHHHHHhcCeee
Confidence            9999999    7899999886    36677788888887765 777888888 999999999999999999999999999


Q ss_pred             EEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHcc
Q 017064          289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGL  367 (378)
Q Consensus       289 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~  367 (378)
                      .+|...-...+-.-+..+.||.+++|....++.. ...+++++.+..+.+=++.|..+|. +++|+-.++++||+.|.++
T Consensus      1653 EIGKfDLSqNspLGMavfLkNvsfHGiLLDsvme-ge~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasG 1731 (2376)
T KOG1202|consen 1653 EIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVME-GEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASG 1731 (2376)
T ss_pred             eecceecccCCcchhhhhhcccceeeeehhhhhc-CcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhcc
Confidence            9996544333333367788999999999877644 2344455555555566666777775 6799999999999999999


Q ss_pred             CCCCCceEeeC
Q 017064          368 HGSQPKQVIKF  378 (378)
Q Consensus       368 ~~~g~kvvv~~  378 (378)
                      ++.| |||+++
T Consensus      1732 KHIG-KVvikv 1741 (2376)
T KOG1202|consen 1732 KHIG-KVVIKV 1741 (2376)
T ss_pred             Cccc-eEEEEE
Confidence            9999 999974

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=8.7e-29  Score=225.22  Aligned_cols=258  Identities=24%  Similarity=0.278  Sum_probs=201.0

Q ss_pred             ccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064           97 GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus        97 g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      |.+|.  ++|.++|||++|+|+++|++++++++||+|++.    +.|++|++++.+.++++|+++++.+++.+ .++++|
T Consensus        14 ~~~~~--~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta   86 (277)
T cd08255          14 GTEKL--PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATA   86 (277)
T ss_pred             cCccC--cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHH
Confidence            44444  478999999999999999999999999999986    46999999999999999999999999988 789999


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCC-CcEEEccCcccHHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKG  254 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~i~~  254 (378)
                      |+++. .+++++|++++|+|+ |.+|++++++|+++|++ ++++.    .++++.+.++++| ++.+++...       .
T Consensus        87 ~~~~~-~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~-------~  153 (277)
T cd08255          87 LNGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVD----PDAARRELAEALGPADPVAADTA-------D  153 (277)
T ss_pred             HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEC----CCHHHHHHHHHcCCCccccccch-------h
Confidence            99986 589999999999975 99999999999999999 87776    4778888889999 565554332       1


Q ss_pred             HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccH--HHHHH
Q 017064          255 LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKA--TECRN  331 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  331 (378)
                      .+.+.+ +|++||+++. .....++++++++|+++.+|..... .......+..+.+++.+.....+......  ....+
T Consensus       154 ~~~~~~-~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T cd08255         154 EIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEAR  231 (277)
T ss_pred             hhcCCC-CCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccc
Confidence            223434 9999999885 5568899999999999999865433 11122334446668777765433111110  12235


Q ss_pred             HHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064          332 MIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      .+++++++++++.+++. .+.|+++++++|++.+.+++..-.|+++
T Consensus       232 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         232 NLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            78889999999998865 5679999999999999877322237764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.75  E-value=2e-18  Score=133.91  Aligned_cols=83  Identities=41%  Similarity=0.516  Sum_probs=71.2

Q ss_pred             CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCC---------------
Q 017064           75 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS---------------  139 (378)
Q Consensus        75 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---------------  139 (378)
                      |+||+|||.++|||++|++.+.|......++|.++|||++|+|+++|+++++|++||+|++.+..               
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            68999999999999999999999644444789999999999999999999999999999984421               


Q ss_pred             -----------CcccccceeccCCceEEc
Q 017064          140 -----------SGTWQSYVVKDQSVWHKV  157 (378)
Q Consensus       140 -----------~G~~~~~~~~~~~~~~~i  157 (378)
                                 +|+|+||+++++++++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                       799999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.74  E-value=2.4e-17  Score=132.26  Aligned_cols=115  Identities=30%  Similarity=0.484  Sum_probs=103.1

Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCC-CccHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVG-GNSASKV  277 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g-~~~~~~~  277 (378)
                      ++|++++|+||+.|++|++++    .+++|++.++++|+++++++++. ..+.+++++++.+ +|+||||+| ...++.+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATD----RSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRG-VDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSS-EEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHhhccccccccccccccccccccccccc-ceEEEEecCcHHHHHHH
Confidence            689999999999999999998    58999999999999999999887 4578999998866 999999999 5677999


Q ss_pred             HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechh
Q 017064          278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK  319 (378)
Q Consensus       278 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (378)
                      +++++++|+++.+|.....+.+++...++.+++++.|+..++
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~  117 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS  117 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence            999999999999997765677888899999999999998763

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.46  E-value=5.9e-14  Score=112.03  Aligned_cols=123  Identities=27%  Similarity=0.334  Sum_probs=79.5

Q ss_pred             CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC--CccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceE
Q 017064          236 LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG--GNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL  312 (378)
Q Consensus       236 ~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  312 (378)
                      |||++++|++..+.      .... ++|+|||++|  .+.+ ..++++| ++|+++.++.      .........+...+
T Consensus         1 LGAd~vidy~~~~~------~~~~-~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~   66 (127)
T PF13602_consen    1 LGADEVIDYRDTDF------AGPG-GVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI   66 (127)
T ss_dssp             CT-SEEEETTCSHH------HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred             CCcCEEecCCCccc------cCCC-CceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence            69999999986554      3332 4999999999  4433 5666778 9999999873      11112222233333


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHHccCCCCCceEe
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALGLHGSQPKQVI  376 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~~~~~~~~~~g~kvvv  376 (378)
                      ....+...   ...+...+.++++.+++.+|++++.+. +|||+++++|++.+++++..| |+||
T Consensus        67 ~~~~~~~~---~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~G-KvVl  127 (127)
T PF13602_consen   67 RYSFLFSV---DPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARG-KVVL  127 (127)
T ss_dssp             EEECCC-H-----HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SS-EEEE
T ss_pred             EEEEEEec---CCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCC-eEeC
Confidence            33332211   000235567999999999999999975 799999999999999999999 9997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.38  E-value=1.7e-11  Score=115.46  Aligned_cols=174  Identities=13%  Similarity=0.091  Sum_probs=129.6

Q ss_pred             HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064          175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (378)
Q Consensus       175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~  253 (378)
                      ++|.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|+++.    .++.|...++.+|++.+. .     ++  
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d----~d~~R~~~A~~~G~~~~~-~-----~e--  253 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE----VDPICALQAAMEGYEVMT-M-----EE--  253 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE----CChhhHHHHHhcCCEEcc-H-----HH--
Confidence            34566655444 468999999999 9999999999999999988765    367788888999985442 1     11  


Q ss_pred             HHhcCCCCCcEEEeCCCCcc-HHHH-HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          254 GLLANLPEPALGFNCVGGNS-ASKV-LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                       ...   ++|+||+|+|... +... +++++++|.++.+|..   +.+++...+..+++++.++..+..         ..
T Consensus       254 -~v~---~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~---------~~  317 (413)
T cd00401         254 -AVK---EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVD---------RY  317 (413)
T ss_pred             -HHc---CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcc---------eE
Confidence             122   3899999999865 4554 9999999999999832   456788888889999988764310         01


Q ss_pred             HHH--HHHHHHHcCCc-ccc---cee-----eccc-cHHHHHHHHHccCCCCCceEee
Q 017064          332 MID--YLLCLAREGKL-KYD---MEL-----VPFN-NFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       332 ~~~--~~~~~l~~g~~-~~~---~~~-----~~l~-~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++  +.+.++.+|++ +..   .+.     |+|+ |+.++++.+.++.....|+++.
T Consensus       318 ~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         318 ELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             EcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence            233  57899999998 432   345     8899 9999999999876543377764

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.35  E-value=3.2e-11  Score=116.36  Aligned_cols=250  Identities=14%  Similarity=0.116  Sum_probs=147.2

Q ss_pred             CCcEEEEEEeec-cChhhhhhhc-ccCCCCCCCCccCCCceeEEEEEecCC----CCCCCCCCEEeeCCCCCcccccc--
Q 017064           75 ENDVCVKMLAAP-INPSDINRIE-GVYPVRPKVPAVGGYEGVGEVYSVGSA----VTRLAPGDWVIPSPPSSGTWQSY--  146 (378)
Q Consensus        75 ~~eVlV~v~~~~-i~~~D~~~~~-g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~~G~~~~~--  146 (378)
                      .-+|+|+--|.. .+.+|-.+.. |..-.. . .-+..   +-+|+.+-.-    +..++.|..++++.+. ....+.  
T Consensus        30 G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~-~-~~v~~---~diilkV~~P~~~e~~~l~~g~~li~~l~p-~~~~~l~~  103 (509)
T PRK09424         30 GFEVVVESGAGQLASFDDAAYREAGAEIVD-G-AAVWQ---SDIILKVNAPSDDEIALLREGATLVSFIWP-AQNPELLE  103 (509)
T ss_pred             CCEEEEeCCCCcCCCCCHHHHHHCCCEEec-C-ccccc---CCEEEEeCCCCHHHHHhcCCCCEEEEEeCc-ccCHHHHH
Confidence            456777766543 3667766554 321110 0 11222   4556655433    3569999998887542 111111  


Q ss_pred             -------eeccCCceEEcCCCCCHhhhhhccccHHHHHHHH----HHHh----------ccCCCCEEEEeCCCchHHHHH
Q 017064          147 -------VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML----EDFT----------TLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       147 -------~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l----~~~~----------~~~~g~~VlV~g~~g~~G~~a  205 (378)
                             ..+.-+.+.++.+.-++..  ....+-...|.++    ....          +..++++|+|.|+ |.+|++|
T Consensus       104 ~l~~~~it~ia~e~vpr~sraq~~d~--lssma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~A  180 (509)
T PRK09424        104 KLAARGVTVLAMDAVPRISRAQSLDA--LSSMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAA  180 (509)
T ss_pred             HHHHcCCEEEEeecccccccCCCccc--ccchhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHH
Confidence                   1222233433333221111  1111122223332    2221          2467999999999 9999999


Q ss_pred             HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc--------------HHHHHHH-hcCCCCCcEEEeCC
Q 017064          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE--------------VKNVKGL-LANLPEPALGFNCV  269 (378)
Q Consensus       206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~--------------~~~i~~~-~~~~g~~Dvvid~~  269 (378)
                      ++.|+.+|++|+++.    .++++++.++++|++.+ ++..+..              .+...+. ....+++|+||+|+
T Consensus       181 i~~Ak~lGA~V~a~D----~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIeta  256 (509)
T PRK09424        181 IGAAGSLGAIVRAFD----TRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTA  256 (509)
T ss_pred             HHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECC
Confidence            999999999877666    48899999999999965 5543311              1122222 22223499999999


Q ss_pred             CCc------c-HHHHHHhcccCCEEEEEecCCCCC--ccccchhhhh-cCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064          270 GGN------S-ASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIF-KDLSLKGFWLQKWLSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       270 g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (378)
                      |.+      . .++.++.+++||+++.++...+.+  .+.+...++. +++++.|++..       +   .+...++.++
T Consensus       257 g~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~-------P---~~~p~~As~l  326 (509)
T PRK09424        257 LIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL-------P---SRLPTQSSQL  326 (509)
T ss_pred             CCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC-------c---hhHHHHHHHH
Confidence            963      2 389999999999999999654443  3444455665 89999997531       1   1223346666


Q ss_pred             HHcCCccc
Q 017064          340 AREGKLKY  347 (378)
Q Consensus       340 l~~g~~~~  347 (378)
                      +.++.++.
T Consensus       327 la~~~i~l  334 (509)
T PRK09424        327 YGTNLVNL  334 (509)
T ss_pred             HHhCCccH
Confidence            77666654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.53  E-value=3.9e-06  Score=81.24  Aligned_cols=126  Identities=14%  Similarity=0.150  Sum_probs=88.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCc--------------ccHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQ--------------LEVKN  251 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~--------------~~~~~  251 (378)
                      .++++|+|.|+ |.+|+++++.|+.+|++|++..    .+.++++.++++|++.+. +..+              +..+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d----~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence            35689999999 9999999999999999987776    477889999999998743 3211              11122


Q ss_pred             HHHHhc-CCCCCcEEEeCC---CC--c--cHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhh--cCceEEEEec
Q 017064          252 VKGLLA-NLPEPALGFNCV---GG--N--SASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIF--KDLSLKGFWL  317 (378)
Q Consensus       252 i~~~~~-~~g~~Dvvid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~--~~~~~~~~~~  317 (378)
                      ..+++. ...++|++|+|+   |.  +  ..+..++.+++|+.+|.++...+.+.+... ...+.  .++.+.+...
T Consensus       237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n  313 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD  313 (511)
T ss_pred             HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence            223232 122499999999   64  3  237789999999999999866665544331 22222  3488777653

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.49  E-value=8e-07  Score=80.55  Aligned_cols=167  Identities=13%  Similarity=0.057  Sum_probs=94.7

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhc
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      +.+++|++||..|+ |. |..+.++++..|.  +|+++.    .+++..+.+++    .|.+.+- ...   ..+..+.-
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD----~s~~~l~~A~~~~~~~g~~~v~-~~~---~d~~~l~~  142 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVD----MTPEMLAKARANARKAGYTNVE-FRL---GEIEALPV  142 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEEC----CCHHHHHHHHHHHHHcCCCCEE-EEE---cchhhCCC
Confidence            67889999999998 66 8888888888776  466665    36777776654    4433221 111   12222221


Q ss_pred             CCCCCcEEEeCCC-----C--ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064          258 NLPEPALGFNCVG-----G--NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       258 ~~g~~Dvvid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      ..+.+|+|+.+..     .  ..+..+.+.|++||+++..+.....+  ++  ..+.+...+.+......          
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~----------  208 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA----------  208 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC----------
Confidence            1124999996542     1  34588999999999999877443221  11  11122222221111100          


Q ss_pred             HHHHHHHHHHHcCCccc-c---ceeeccccHHHHHHHH--HccCCCCCceE
Q 017064          331 NMIDYLLCLAREGKLKY-D---MELVPFNNFQTALSKA--LGLHGSQPKQV  375 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~-~---~~~~~l~~~~~a~~~~--~~~~~~g~kvv  375 (378)
                      ...+++.+++++..+.. .   ...++++++.++++.+  ..++..+ +.+
T Consensus       209 ~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~  258 (272)
T PRK11873        209 LQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLD-GYI  258 (272)
T ss_pred             CCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccC-ceE
Confidence            01233445555533332 2   2358899999999998  5555444 444

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.24  E-value=1.8e-05  Score=75.23  Aligned_cols=104  Identities=15%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHhccC-CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064          174 LTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       174 ~ta~~~l~~~~~~~-~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      ..+|.++.+..++. .|++|+|.|. |.+|...++.++.+|++|+++.+    ++.+...+...|++. .+        +
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~----dp~ra~~A~~~G~~v-~~--------l  261 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEV----DPICALQAAMDGFRV-MT--------M  261 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC----CchhhHHHHhcCCEe-cC--------H
Confidence            34667776643554 8999999999 99999999999999999887763    445544455557642 21        1


Q ss_pred             HHHhcCCCCCcEEEeCCCCcc-HH-HHHHhcccCCEEEEEecCC
Q 017064          253 KGLLANLPEPALGFNCVGGNS-AS-KVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  294 (378)
                      .+...   ++|+||+++|... +. ..+..+++|+.++..|...
T Consensus       262 ~eal~---~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        262 EEAAE---LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             HHHHh---CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            22222   3999999999854 43 6789999999999998543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.23  E-value=0.00013  Score=66.81  Aligned_cols=110  Identities=9%  Similarity=0.106  Sum_probs=79.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+++|+|.|. |.+|+.+++.++.+|++|+++.+    +.++.+.++++|+..+.      .+.+.+...   ++|+||+
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r----~~~~~~~~~~~G~~~~~------~~~l~~~l~---~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGAR----KSAHLARITEMGLSPFH------LSELAEEVG---KIDIIFN  216 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCeeec------HHHHHHHhC---CCCEEEE
Confidence            5899999999 99999999999999999888874    56667777888876431      123334443   3999999


Q ss_pred             CCCCccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEE
Q 017064          268 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG  314 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  314 (378)
                      |++...+ ...++.+++++.++.++...+. ..+  ...-.++++..+
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~  261 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALL  261 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEE
Confidence            9876544 5677899999999999865543 222  233345566554

>PLN02494 adenosylhomocysteinase

Probab=98.23  E-value=2.4e-05  Score=74.60  Aligned_cols=100  Identities=14%  Similarity=0.110  Sum_probs=75.2

Q ss_pred             HHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+..++ -.|++|+|.|. |.+|+..++.++.+|++|+++.+    ++.+...+...|+..+ +     .++   
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~----dp~r~~eA~~~G~~vv-~-----leE---  305 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEI----DPICALQALMEGYQVL-T-----LED---  305 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhhHHHHhcCCeec-c-----HHH---
Confidence            46666655454 67999999999 99999999999999999888762    4555555666676532 1     122   


Q ss_pred             HhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~  292 (378)
                      ...   ..|++|+++|... + ...++.|++++.++.+|.
T Consensus       306 al~---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        306 VVS---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             HHh---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence            222   3899999999864 3 789999999999999984

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.09  E-value=4.7e-05  Score=71.98  Aligned_cols=102  Identities=17%  Similarity=0.156  Sum_probs=74.3

Q ss_pred             HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064          175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (378)
Q Consensus       175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~  253 (378)
                      .++.++.+..+ ...|++|+|.|. |.+|+..++.++.+|++|+++..    ++.+...+...|+. +.+.     ++  
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~----dp~r~~~A~~~G~~-v~~l-----ee--  246 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEV----DPIRALEAAMDGFR-VMTM-----EE--  246 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeC----ChhhHHHHHhcCCE-eCCH-----HH--
Confidence            35556655434 468999999999 99999999999999999888753    44555555666763 2211     11  


Q ss_pred             HHhcCCCCCcEEEeCCCCccH-H-HHHHhcccCCEEEEEecC
Q 017064          254 GLLANLPEPALGFNCVGGNSA-S-KVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~~~-~-~~~~~l~~~G~~v~~g~~  293 (378)
                       ...   +.|++|+++|.... . ..+..+++++.++.+|..
T Consensus       247 -al~---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       247 -AAK---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             -HHh---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence             222   38999999998654 3 588999999999999843

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.96  E-value=0.00043  Score=65.39  Aligned_cols=148  Identities=13%  Similarity=0.123  Sum_probs=90.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++.+    +.++.+.+. .+|........  ..+.+.+...   ++|++|+
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~----~~~~~~~l~~~~g~~v~~~~~--~~~~l~~~l~---~aDvVI~  236 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDI----NIDRLRQLDAEFGGRIHTRYS--NAYEIEDAVK---RADLLIG  236 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHhcCceeEeccC--CHHHHHHHHc---cCCEEEE
Confidence            456999999 99999999999999998777663    556665554 45553222221  1233444444   3999999


Q ss_pred             CCC---C--cc--HHHHHHhcccCCEEEEEecCCCCCcccc------chhhhhcCceEEEE-echhhhccccHHHH-HHH
Q 017064          268 CVG---G--NS--ASKVLKFLSQGGTMVTYGGMSKKPITVS------TSAFIFKDLSLKGF-WLQKWLSSEKATEC-RNM  332 (378)
Q Consensus       268 ~~g---~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~  332 (378)
                      |++   .  +.  ....++.+++++.++.++...+......      ...+...++.+.+. ++.+.+.......+ +..
T Consensus       237 a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l  316 (370)
T TIGR00518       237 AVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNAT  316 (370)
T ss_pred             ccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHH
Confidence            983   2  22  3778888999999999986555443321      11233356777766 33333222222222 445


Q ss_pred             HHHHHHHHHcCCcc
Q 017064          333 IDYLLCLAREGKLK  346 (378)
Q Consensus       333 ~~~~~~~l~~g~~~  346 (378)
                      +..+..+..+|.++
T Consensus       317 ~~~l~~~~~~g~~~  330 (370)
T TIGR00518       317 MPYVLELANHGWRA  330 (370)
T ss_pred             HHHHHHHHhccccc
Confidence            55566777667554

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.93  E-value=5.9e-05  Score=77.32  Aligned_cols=139  Identities=14%  Similarity=0.106  Sum_probs=86.1

Q ss_pred             cccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       141 G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      -++++|..+++..++.+ +.++.+++......          .....+|+++||+|++|++|...++.+...|++|+++.
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            45678888888878777 66777776522110          12234689999999999999999999999999999888


Q ss_pred             cCCCCcHHHHHHH-HhCCC---cEEE--ccCcc-cHHH-HHHHhcCCCCCcEEEeCCCCcc-------------------
Q 017064          221 RDRAGSDEAKEKL-KGLGA---DEVF--TESQL-EVKN-VKGLLANLPEPALGFNCVGGNS-------------------  273 (378)
Q Consensus       221 ~~~~~~~~~~~~~-~~~ga---~~vi--~~~~~-~~~~-i~~~~~~~g~~Dvvid~~g~~~-------------------  273 (378)
                      +    +.++.+.+ ..++.   ...+  |..+. .+.. +.+.....|++|++|+++|...                   
T Consensus       454 r----~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N  529 (681)
T PRK08324        454 L----DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN  529 (681)
T ss_pred             C----CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence            5    34443332 33433   1122  22221 1222 2222222335999999998310                   


Q ss_pred             -------HHHHHHhccc---CCEEEEEecCC
Q 017064          274 -------ASKVLKFLSQ---GGTMVTYGGMS  294 (378)
Q Consensus       274 -------~~~~~~~l~~---~G~~v~~g~~~  294 (378)
                             ++.++..+++   +|++++++...
T Consensus       530 ~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence                   1334555555   68999998543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.93  E-value=0.00012  Score=64.60  Aligned_cols=103  Identities=18%  Similarity=0.227  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---hCCCcEEEccCcccHHHH----HHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---GLGADEVFTESQLEVKNV----KGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~~ga~~vi~~~~~~~~~i----~~~~~~~  259 (378)
                      .+++|+|+|++|++|..+++.+...|++|+++++    ++++.+.+ +   ..+..+.+..+-.+.+.+    .+.....
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR----NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999986    34444333 2   223323333322222221    1111112


Q ss_pred             CCCcEEEeCCCCcc------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNS------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +++|.++.++|...                        ++..+.+++++|+++.++...
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            34899999998421                        234456667789999988543

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.92  E-value=0.00021  Score=63.88  Aligned_cols=139  Identities=17%  Similarity=0.228  Sum_probs=87.0

Q ss_pred             CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      .+++||+++..+.    |.+|.. +...++++++++++-.+..-.  ...++..+..  .+.++++||-.|+ |. |..+
T Consensus        66 p~~~g~~~~i~p~----~~~~~~-~~~~~i~i~p~~afgtg~h~t--t~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~  134 (250)
T PRK00517         66 PIRIGDRLWIVPS----WEDPPD-PDEINIELDPGMAFGTGTHPT--TRLCLEALEK--LVLPGKTVLDVGC-GS-GILA  134 (250)
T ss_pred             CEEEcCCEEEECC----CcCCCC-CCeEEEEECCCCccCCCCCHH--HHHHHHHHHh--hcCCCCEEEEeCC-cH-HHHH
Confidence            3568988877653    666654 778899999999877654211  1112333332  2568899999998 54 8887


Q ss_pred             HHHHHHcCCc-EEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc----HHH
Q 017064          206 IQIARHRGIH-SINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----ASK  276 (378)
Q Consensus       206 v~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----~~~  276 (378)
                      +.+++ .|+. ++++.    .++...+.+++    .+....+....          +. ..||+|+.+.....    +..
T Consensus       135 i~~~~-~g~~~v~giD----is~~~l~~A~~n~~~~~~~~~~~~~~----------~~-~~fD~Vvani~~~~~~~l~~~  198 (250)
T PRK00517        135 IAAAK-LGAKKVLAVD----IDPQAVEAARENAELNGVELNVYLPQ----------GD-LKADVIVANILANPLLELAPD  198 (250)
T ss_pred             HHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCceEEEcc----------CC-CCcCEEEEcCcHHHHHHHHHH
Confidence            76555 5765 66665    35666555543    33311111000          11 13999997766543    367


Q ss_pred             HHHhcccCCEEEEEe
Q 017064          277 VLKFLSQGGTMVTYG  291 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g  291 (378)
                      +.+.|++||.+++.+
T Consensus       199 ~~~~LkpgG~lilsg  213 (250)
T PRK00517        199 LARLLKPGGRLILSG  213 (250)
T ss_pred             HHHhcCCCcEEEEEE
Confidence            889999999999876

>PRK12742 oxidoreductase; Provisional

Probab=97.92  E-value=0.00021  Score=63.09  Aligned_cols=103  Identities=16%  Similarity=0.214  Sum_probs=66.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .++++||+|++|++|...++.+...|++|+.+.+.   ++++.+ ...+++...+ ..+-.+.+.+.+.....+++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERLAQETGATAV-QTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHhCCCcEEE
Confidence            46899999999999999999999999998877642   333333 3345565433 233223333444333334599999


Q ss_pred             eCCCCccH--------------------------HHHHHhcccCCEEEEEecCC
Q 017064          267 NCVGGNSA--------------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       267 d~~g~~~~--------------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +++|....                          ......++.+|+++.++...
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            99985210                          12334456789999988543

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.91  E-value=0.0028  Score=57.52  Aligned_cols=240  Identities=15%  Similarity=0.108  Sum_probs=127.7

Q ss_pred             ccCCCceeEEEEEecCCCCCCCCCCEEeeCCCC--------------------------CcccccceeccCCceEEcCCC
Q 017064          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQSVWHKVSKD  160 (378)
Q Consensus       107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--------------------------~G~~~~~~~~~~~~~~~iP~~  160 (378)
                      .+|---+ ++|++  |.+.++.+|.||.+..+.                          .-.|..|.++..+..+    .
T Consensus        32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y----~  104 (314)
T PF11017_consen   32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY----D  104 (314)
T ss_pred             ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc----C
Confidence            3444444 56666  788889999999987653                          1123333333322211    0


Q ss_pred             CCHhhhhhcccc-HHHHHHHHHHHhc---cCCCCEEEEeCCCchHHHHHHHHHH--HcCCcEEEEecCCCCcHHHHHHHH
Q 017064          161 SPMEYAATIIVN-PLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKLK  234 (378)
Q Consensus       161 ~~~~~aa~~~~~-~~ta~~~l~~~~~---~~~g~~VlV~g~~g~~G~~av~la~--~~g~~vi~~~~~~~~~~~~~~~~~  234 (378)
                      -+.+..-++..+ +.|.|. |.+...   .-..+.|+|..|++=.++..+.+++  ..+.+++.++     +.....+.+
T Consensus       105 ~~~e~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-----S~~N~~Fve  178 (314)
T PF11017_consen  105 PEREDWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-----SARNVAFVE  178 (314)
T ss_pred             cchhHHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-----cCcchhhhh
Confidence            012222222222 334442 322121   2334789999999999999999888  3456888887     666677888


Q ss_pred             hCC-CcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCC-EEEEEecCCCCCccccchhhhhcCce
Q 017064          235 GLG-ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGG-TMVTYGGMSKKPITVSTSAFIFKDLS  311 (378)
Q Consensus       235 ~~g-a~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~  311 (378)
                      .+| .|.++.|++     |..+...  ..-+++|.+|+..+ .....++...= ..+.+|......... ...+.  +.+
T Consensus       179 ~lg~Yd~V~~Yd~-----i~~l~~~--~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~-~~~l~--g~~  248 (314)
T PF11017_consen  179 SLGCYDEVLTYDD-----IDSLDAP--QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEA-PADLP--GPR  248 (314)
T ss_pred             ccCCceEEeehhh-----hhhccCC--CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCc-cccCC--CCC
Confidence            998 467776654     4444333  36799999999765 44555555533 456666544332211 11111  111


Q ss_pred             EEEEechhhhcc----ccHHHHHHHHHHHHHHHHcCCcccc-c-eeeccccHHHHHHHHHccCC
Q 017064          312 LKGFWLQKWLSS----EKATECRNMIDYLLCLAREGKLKYD-M-ELVPFNNFQTALSKALGLHG  369 (378)
Q Consensus       312 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~g~~~~~-~-~~~~l~~~~~a~~~~~~~~~  369 (378)
                      ...++.......    ..++.+.+.+.+.+.-......... + +.-..+.+.++++.+.+++.
T Consensus       249 ~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  249 PEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             cEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            111222111111    1122222223222222222223332 3 35789999999999987764

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.87  E-value=6.1e-05  Score=75.54  Aligned_cols=124  Identities=13%  Similarity=0.085  Sum_probs=76.2

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-----------------CcHHHHHHHHhCCCcEEEccCc-
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----------------GSDEAKEKLKGLGADEVFTESQ-  246 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~ga~~vi~~~~-  246 (378)
                      ...+|++|+|.|+ |+.|+.+++.++..|++|+++.....                 ....+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3678999999999 99999999999999999877652110                 1245667788999988776543 


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEE
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      .+.. ..... .  ++|+||+++|.... ...+.....+|.+..++.... ..... .....+++.+.|.
T Consensus       212 ~~~~-~~~~~-~--~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~-~~~~~-~~~~gk~v~ViGg  275 (564)
T PRK12771        212 EDIT-LEQLE-G--EFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRA-VGEGE-PPFLGKRVVVIGG  275 (564)
T ss_pred             CcCC-HHHHH-h--hCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHH-hhccC-CcCCCCCEEEECC
Confidence            2211 11111 1  39999999997542 333444455565544432111 00111 2234566777663

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.77  E-value=0.00053  Score=65.75  Aligned_cols=101  Identities=13%  Similarity=0.118  Sum_probs=71.2

Q ss_pred             HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+..+ .-.|++|+|.|. |.+|...++.++.+|++|+++.+    ++.+...+...|+..+      .   +.+
T Consensus       240 ~~d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~----dp~~a~~A~~~G~~~~------~---lee  305 (476)
T PTZ00075        240 LIDGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEI----DPICALQAAMEGYQVV------T---LED  305 (476)
T ss_pred             HHHHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhHHHHHhcCceec------c---HHH
Confidence            3344444332 457899999999 99999999999999999887753    3334333344565432      1   222


Q ss_pred             HhcCCCCCcEEEeCCCCccH--HHHHHhcccCCEEEEEecC
Q 017064          255 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~~  293 (378)
                      +..   ..|+|+.++|...+  ...+..|++++.++.+|-.
T Consensus       306 ll~---~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        306 VVE---TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             HHh---cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            222   39999999997544  5889999999999999844

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.76  E-value=1.6e-05  Score=76.58  Aligned_cols=144  Identities=19%  Similarity=0.196  Sum_probs=89.5

Q ss_pred             ccCCCceeEEEEEecCCCCCCCCCCEEe-eCCCC---------------CcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPS---------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (378)
Q Consensus       107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~---------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~  170 (378)
                      ..-|||+++.+.+|++++++.-.|+.-+ +....               .+.|++.+        ++|+.+..+.+.. .
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~--------~~~k~v~~~t~i~-~  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAF--------SVAKRVRTETGIG-A  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH--------HHHhhHhhhcCCC-C
Confidence            4579999999999999998866776432 11100               23333333        3344443332222 2


Q ss_pred             ccHHHHHHHHHHHhc---cCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHH-HHHHHhCCCcEEEccC
Q 017064          171 VNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEA-KEKLKGLGADEVFTES  245 (378)
Q Consensus       171 ~~~~ta~~~l~~~~~---~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~~  245 (378)
                      .+.+.++.++.....   -.++++|+|.|+ |.+|.++++.++..|+ +++++.+    +.++ .++++.+|.+ +++. 
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r----~~~ra~~la~~~g~~-~~~~-  233 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR----TLERAEELAEEFGGE-AIPL-  233 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC----CHHHHHHHHHHcCCc-EeeH-
Confidence            234556666654222   257899999999 9999999999999998 5555553    4555 3466778764 3322 


Q ss_pred             cccHHHHHHHhcCCCCCcEEEeCCCCcc
Q 017064          246 QLEVKNVKGLLANLPEPALGFNCVGGNS  273 (378)
Q Consensus       246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~~  273 (378)
                          +.......   ++|+||+|+|.+.
T Consensus       234 ----~~~~~~l~---~aDvVI~aT~s~~  254 (423)
T PRK00045        234 ----DELPEALA---EADIVISSTGAPH  254 (423)
T ss_pred             ----HHHHHHhc---cCCEEEECCCCCC
Confidence                22223233   3999999999754

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.66  E-value=0.00027  Score=67.96  Aligned_cols=143  Identities=17%  Similarity=0.230  Sum_probs=90.4

Q ss_pred             ccCCCceeEEEEEecCCCCCCCCCCEEee-CCC---------------CCcccccceeccCCceEE---c-CCCCCHhhh
Q 017064          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIP-SPP---------------SSGTWQSYVVKDQSVWHK---V-SKDSPMEYA  166 (378)
Q Consensus       107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~---------------~~G~~~~~~~~~~~~~~~---i-P~~~~~~~a  166 (378)
                      ..-|.|++|.+.+|++++++.-.|+.-++ -..               ..+.|++++.++. .+..   + +..+|...+
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~  166 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA  166 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence            45789999999999999988667764321 100               0467888888776 3222   3 333333222


Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHH-HHHHHhCCCcEEEcc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEA-KEKLKGLGADEVFTE  244 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~  244 (378)
                      |         ..-..+.....++++|+|.|+ |.+|..+++.++..|+ +++++.+    +.++ .++++.+|... ++.
T Consensus       167 A---------v~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r----s~~ra~~la~~~g~~~-i~~  231 (417)
T TIGR01035       167 A---------VELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR----TYERAEDLAKELGGEA-VKF  231 (417)
T ss_pred             H---------HHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHcCCeE-eeH
Confidence            2         111122233467899999999 9999999999999995 5666653    4444 44667777643 222


Q ss_pred             CcccHHHHHHHhcCCCCCcEEEeCCCCcc
Q 017064          245 SQLEVKNVKGLLANLPEPALGFNCVGGNS  273 (378)
Q Consensus       245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~  273 (378)
                           +.+.+...   ++|+||+|++.+.
T Consensus       232 -----~~l~~~l~---~aDvVi~aT~s~~  252 (417)
T TIGR01035       232 -----EDLEEYLA---EADIVISSTGAPH  252 (417)
T ss_pred             -----HHHHHHHh---hCCEEEECCCCCC
Confidence                 22333333   3999999998744

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.63  E-value=0.0042  Score=56.52  Aligned_cols=93  Identities=15%  Similarity=0.189  Sum_probs=68.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++++|.|. |.+|...+..++.+|++|++..|    +.++.+.+.+.|...+ .     ..++.+...   +.|+||+
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R----~~~~~~~~~~~g~~~~-~-----~~~l~~~l~---~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR----SSADLARITEMGLIPF-P-----LNKLEEKVA---EIDIVIN  215 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCeee-c-----HHHHHHHhc---cCCEEEE
Confidence            4789999999 99999999999999999888874    4556556666665422 1     123344443   3999999


Q ss_pred             CCCCccH-HHHHHhcccCCEEEEEecCC
Q 017064          268 CVGGNSA-SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++....+ ...++.++++..++.++..+
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCC
Confidence            9976544 45778899998899888543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.63  E-value=0.00089  Score=59.98  Aligned_cols=107  Identities=21%  Similarity=0.269  Sum_probs=67.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EE--ccCcccHHHHH----HHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF--TESQLEVKNVK----GLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi--~~~~~~~~~i~----~~~~~~  259 (378)
                      .|+.|+|+||++|+|...+.-.-..|++++.+++... ..++. +.+++.+... ++  ..+-.+.+++.    ......
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~r-rl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRAR-RLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhh-hHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5789999999999998888777778999888886532 23333 5556555444 22  11111222222    222344


Q ss_pred             CCCcEEEeCCCCccH--------------------------HHHHHhcccC--CEEEEEecCCC
Q 017064          260 PEPALGFNCVGGNSA--------------------------SKVLKFLSQG--GTMVTYGGMSK  295 (378)
Q Consensus       260 g~~Dvvid~~g~~~~--------------------------~~~~~~l~~~--G~~v~~g~~~~  295 (378)
                      |++|+.|+++|-...                          +.++..|++.  |++|.++...+
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence            569999999984211                          3355566554  99999986655

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.61  E-value=0.00051  Score=59.51  Aligned_cols=80  Identities=20%  Similarity=0.260  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC--cE--EEccCcc-cH-HHHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--DE--VFTESQL-EV-KNVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga--~~--vi~~~~~-~~-~~i~~~~~~~g  260 (378)
                      .++.++|+||++++|.+.++.....|++|+.+.|    ..++++.+ .+++.  -.  .+|-.+. .. ..+..+....+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR----R~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec----cHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            3578999999999999999999999999999996    56666544 56773  22  2333332 22 23455566666


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|+.++++|-
T Consensus        81 ~iDiLvNNAGl   91 (246)
T COG4221          81 RIDILVNNAGL   91 (246)
T ss_pred             cccEEEecCCC
Confidence            79999999995

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.61  E-value=0.00053  Score=63.28  Aligned_cols=109  Identities=19%  Similarity=0.178  Sum_probs=74.8

Q ss_pred             CceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc---CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 017064          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE  228 (378)
Q Consensus       152 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~  228 (378)
                      ...+++|+.+..+.++... +.+.++.++......   -++.+|+|.|+ |.+|..+++.++..|++.+.+++   .+.+
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~---r~~~  213 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIAN---RTYE  213 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEe---CCHH
Confidence            5677788998888777665 456677676542222   36899999999 99999999999988875555443   2445


Q ss_pred             H-HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          229 A-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       229 ~-~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      + .++++++|+. +++.     +.+.+...   ..|+||.|++.+..
T Consensus       214 ra~~la~~~g~~-~~~~-----~~~~~~l~---~aDvVi~at~~~~~  251 (311)
T cd05213         214 RAEELAKELGGN-AVPL-----DELLELLN---EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHHHcCCe-EEeH-----HHHHHHHh---cCCEEEECCCCCch
Confidence            4 4677788874 3322     12223233   38999999998765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00087  Score=62.62  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~  258 (378)
                      .+++++|+|+++++|...++.+...|++|+++.+.    +++.    +.+++.|.+.. +..+-.+.+.+.    .....
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARG----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999998899999998863    3333    23344565433 222222222222    22222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|.+|++|+++|.
T Consensus        83 ~g~iD~lInnAg~   95 (334)
T PRK07109         83 LGPIDTWVNNAMV   95 (334)
T ss_pred             CCCCCEEEECCCc
Confidence            3459999999985

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.0015  Score=59.32  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~----i~~~~~~~g~  261 (378)
                      .+++|+|+|++|++|...++.+...|++|+++.+    ++++.+.+...+...+ .|..+. ..+.    +.+..++  .
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r----~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g--~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR----KEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGG--R   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC--C
Confidence            4678999999999999999988889999999985    4556666655565443 233222 2222    2222222  5


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        77 id~li~~Ag~   86 (277)
T PRK05993         77 LDALFNNGAY   86 (277)
T ss_pred             ccEEEECCCc
Confidence            9999999873

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.53  E-value=0.0012  Score=64.99  Aligned_cols=109  Identities=14%  Similarity=0.180  Sum_probs=69.5

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---h-----CCC-----cEEEcc
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---G-----LGA-----DEVFTE  244 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~-----~ga-----~~vi~~  244 (378)
                      +.-...+.+.|++|||+||+|++|...++.+...|++|++++|.    .++.+.+ .   +     .|.     ..++..
T Consensus        70 ~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~g  145 (576)
T PLN03209         70 AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVEC  145 (576)
T ss_pred             ccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHhhhhccccccccccCceEEEEe
Confidence            33344567789999999999999999999998899999999863    4443322 1   1     121     122322


Q ss_pred             CcccHHHHHHHhcCCCCCcEEEeCCCCcc----------------HHHHHHhccc--CCEEEEEecCC
Q 017064          245 SQLEVKNVKGLLANLPEPALGFNCVGGNS----------------ASKVLKFLSQ--GGTMVTYGGMS  294 (378)
Q Consensus       245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  294 (378)
                      +-.+.+.+.+..+   ++|+||+++|...                ....++.+..  .|+||+++...
T Consensus       146 DLtD~esI~~aLg---giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        146 DLEKPDQIGPALG---NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             cCCCHHHHHHHhc---CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            3233455665554   3999999998531                1223333332  37999998653

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00036  Score=65.05  Aligned_cols=80  Identities=29%  Similarity=0.343  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHHHH----hcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.    +++.    +.+++.|.+.. +..+-.+.+.+.++    ...
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARD----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999988853    4443    23345665543 22222222222222    112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        82 ~g~iD~lVnnAG~   94 (330)
T PRK06139         82 GGRIDVWVNNVGV   94 (330)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999984

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.51  E-value=0.00082  Score=56.74  Aligned_cols=93  Identities=19%  Similarity=0.334  Sum_probs=65.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      |+|+||+|.+|...++.+...|.+|++++|.    +++.+.  ..+.+ ++..+-.+.+.+.+...+   +|+||.+.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~----~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~---~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS----PSKAED--SPGVE-IIQGDLFDPDSVKAALKG---ADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESS----GGGHHH--CTTEE-EEESCTTCHHHHHHHHTT---SSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecC----chhccc--ccccc-cceeeehhhhhhhhhhhh---cchhhhhhhh
Confidence            7999999999999999999999999999975    333333  34444 344444455667776664   9999999984


Q ss_pred             c-----cHHHHHHhcccCC--EEEEEecCC
Q 017064          272 N-----SASKVLKFLSQGG--TMVTYGGMS  294 (378)
Q Consensus       272 ~-----~~~~~~~~l~~~G--~~v~~g~~~  294 (378)
                      .     .....++.++..|  ++++++...
T Consensus        71 ~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   71 PPKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             TTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             hcccccccccccccccccccccceeeeccc
Confidence            2     2345556555444  888887544

...

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.002  Score=58.31  Aligned_cols=78  Identities=18%  Similarity=0.186  Sum_probs=52.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dvvi  266 (378)
                      +++||+||+|++|...++.+...|++|+++.+    +.++.+.+...+...+ .|..+. ..++ +.......+++|++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATAR----KAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999889999999885    4555555555555433 233332 2222 222222334599999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        78 ~~ag~   82 (274)
T PRK05693         78 NNAGY   82 (274)
T ss_pred             ECCCC
Confidence            99984

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.48  E-value=0.0017  Score=58.23  Aligned_cols=83  Identities=10%  Similarity=-0.012  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHH----HHHHhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN----VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~----i~~~~~~~g  260 (378)
                      .|+++||+|++  +++|.+.++.+...|++|+++.+... ..++.+ ..++++....+..+-.+.+.    +.+.....|
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            47899999997  48999999988889999988875321 122222 23344543344333222222    222222334


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|++|+++|.
T Consensus        88 ~ld~lv~nAg~   98 (258)
T PRK07533         88 RLDFLLHSIAF   98 (258)
T ss_pred             CCCEEEEcCcc
Confidence            69999999974

>PRK06182 short chain dehydrogenase; Validated

Probab=97.45  E-value=0.0024  Score=57.78  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv  264 (378)
                      .+++++|+|++|++|...++.+...|++|+++.+    +.++.+.+...+...+ .|..+. ..+. +.+.....+++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAAR----RVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3679999999999999999998889999999885    4555544444444332 232222 2222 2222223345999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus        78 li~~ag~   84 (273)
T PRK06182         78 LVNNAGY   84 (273)
T ss_pred             EEECCCc
Confidence            9999984

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.44  E-value=0.00066  Score=57.70  Aligned_cols=105  Identities=22%  Similarity=0.266  Sum_probs=73.3

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHhcC
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLAN  258 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~~~  258 (378)
                      +.+...+++|++||=.|+  +.|+.++-+|+..| +|+.+-+...-.+..+..++.+|.+.+. ...+.+    +-+. .
T Consensus        64 m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~----~G~~-~  135 (209)
T COG2518          64 MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS----KGWP-E  135 (209)
T ss_pred             HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc----cCCC-C
Confidence            335588999999999995  78999999999888 8888875432222244556778885442 222211    1111 1


Q ss_pred             CCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEec
Q 017064          259 LPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~  292 (378)
                      .+.||.++-+++.+.. +..++.|++||+++..-+
T Consensus       136 ~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         136 EAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            1249999988888777 677899999999988764

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0014  Score=58.21  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHHHH----hcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~~~----~~~  258 (378)
                      ++.+++|+|++|++|...+..+...|++++++.+.    +++.+    .++..+... ++..+-.+.+.+.+.    ...
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL----AAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999988899999888753    33322    223334332 222222222222222    222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|.++|.
T Consensus        82 ~~~id~vi~~ag~   94 (250)
T PRK12939         82 LGGLDGLVNNAGI   94 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999985

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.0012  Score=58.58  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+.+++|+|++|++|...++.+...|++|+++.+    +.++.+.+ ...+... +..+-.+.+.+.+.....+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAAR----NAAALDRLAGETGCEP-LRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeE-EEecCCCHHHHHHHHHHhCCCCEEE
Confidence            4689999999999999999999999999988875    34444333 3445433 2222222233444333334599999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            99985

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.40  E-value=0.0019  Score=58.52  Aligned_cols=106  Identities=17%  Similarity=0.191  Sum_probs=65.3

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .|+++||+|++  +++|++.++.+...|++|+++.+.. ...++.+. ..+++....+..+-.+   ++. +.+.....|
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999996  6999999998888999999877531 11223332 2445544333222222   222 222223334


Q ss_pred             CCcEEEeCCCCc-------c--------H---------------HHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGN-------S--------A---------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~-------~--------~---------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|++|+++|..       .        +               +..+..+..+|+++.++...
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            699999999841       0        0               23455677789999987543

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.006  Score=54.57  Aligned_cols=84  Identities=20%  Similarity=0.244  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .+++++|.|++|++|...++.+...|++ |+++.+......+..+.++..+.... +  |..+. .+.+ +.......++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999999999999999 77776531111111223334454322 2  22221 1222 1222122235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.36  E-value=0.0016  Score=58.07  Aligned_cols=82  Identities=22%  Similarity=0.282  Sum_probs=58.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEccCc-ccH----HHHHHHhcCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQ-LEV----KNVKGLLANL  259 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~--vi~~~~-~~~----~~i~~~~~~~  259 (378)
                      -.|+.|||+|+++++|.+.++-...+|++++.+.....+.++..+..+..|-.+  ..|-.+ +++    +++++..   
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~---  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV---  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc---
Confidence            348999999999999998887777789987777766667777778888776322  333333 222    3444444   


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |.+|++++++|-
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence            359999999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.36  E-value=0.0026  Score=56.96  Aligned_cols=84  Identities=14%  Similarity=0.177  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+......+..+.+++.|.... +..+-.+.+.+.    ......+.+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999888643212222333444554432 222222222221    111122359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.|+|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999985

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0019  Score=58.05  Aligned_cols=80  Identities=21%  Similarity=0.313  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCCc-EEEccCccc---HHHHHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGAD-EVFTESQLE---VKNVKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga~-~vi~~~~~~---~~~i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    .++.+.+    ++ .+.+ ..+..+-.+   .+.+.+....
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRN----EENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN   82 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence            47899999999999999999999999999988753    3332222    22 1322 222222222   2222211112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        83 ~g~iD~lv~nag~   95 (263)
T PRK08339         83 IGEPDIFFFSTGG   95 (263)
T ss_pred             hCCCcEEEECCCC
Confidence            3469999999984

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0039  Score=55.94  Aligned_cols=80  Identities=13%  Similarity=0.183  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~  261 (378)
                      .+++++|+|+++++|...++.+...|++|+++.+.    .++. +..++++... .+..+-.+.+.    +.......+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDID----ADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999988899999988853    3333 3334455322 22222222222    2222222335


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        81 id~lv~~ag~   90 (261)
T PRK08265         81 VDILVNLACT   90 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0016  Score=59.69  Aligned_cols=79  Identities=18%  Similarity=0.307  Sum_probs=50.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHH----HHHhcCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNV----KGLLANL  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~  259 (378)
                      +.+++|+|++|++|...++.+...|++|+++.+.    .++.+    .+.+.+.+. .+..+-.+.+.+    .......
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~----~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARR----EDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999888889999999863    33332    223334332 222222222222    2222223


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |.+|++|+|+|.
T Consensus       116 g~id~li~~AG~  127 (293)
T PRK05866        116 GGVDILINNAGR  127 (293)
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0062  Score=54.06  Aligned_cols=105  Identities=14%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .++++||+|++|++|...+..+...|.+|+++.|......++ .+.++..+.. ..+..+-.+.+.+    .+.....++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            467999999999999999998888899999887642111111 1122333432 2222222222222    222222235


Q ss_pred             CcEEEeCCCCcc--------------------HHHHHHhcccCCEEEEEec
Q 017064          262 PALGFNCVGGNS--------------------ASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------~~~~~~~l~~~G~~v~~g~  292 (378)
                      +|++|.++|...                    ++.+...+..+|++++++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            999999887421                    1334555566789998875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.25  E-value=0.0014  Score=58.24  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccC--c-ccHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~--~-~~~~~-i~~~~~~~g~~  262 (378)
                      +++++||+|++|++|+..++.+...|++|+++.+.....++..+.++..+... .+..+  + ...++ +.......+.+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999899999888753211111222233445442 22222  2 12222 22222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |.+|+++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK06128 oxidoreductase; Provisional

Probab=97.24  E-value=0.004  Score=57.20  Aligned_cols=107  Identities=15%  Similarity=0.201  Sum_probs=64.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--cHHHHHHHHhCCCcEE-EccCcccHHH----HHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEV-FTESQLEVKN----VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--~~~~~~~~~~~ga~~v-i~~~~~~~~~----i~~~~~~~g  260 (378)
                      .++++||+|+++++|...+..+...|++|+++.+....  .++..+.++..|.... +..+-.+.+.    +.+.....+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999888899999877643210  1112233444554332 2222222222    222222233


Q ss_pred             CCcEEEeCCCCcc---------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGNS---------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|++|+++|...                           .+.++..++++|+++.++...
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~  194 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ  194 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence            5999999998410                           023345566789999987543

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0032  Score=55.45  Aligned_cols=80  Identities=15%  Similarity=0.142  Sum_probs=49.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC---CcEEEccCcccHHH----HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG---ADEVFTESQLEVKN----VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g---a~~vi~~~~~~~~~----i~~~~~~~  259 (378)
                      .+.+++|+|++|++|...++.+...|++|+++.+.    +++.. ..+++.   .-+.+..+-.+.+.    +.......
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARD----QKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC----HHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999998888889999998853    33332 223332   12222222222222    22222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|++.|.
T Consensus        81 ~~~d~vi~~ag~   92 (237)
T PRK07326         81 GGLDVLIANAGV   92 (237)
T ss_pred             CCCCEEEECCCC
Confidence            359999999874

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.20  E-value=0.0021  Score=57.19  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-h----CCCcE-EEccC--c-ccHHHHHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G----LGADE-VFTES--Q-LEVKNVKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~----~ga~~-vi~~~--~-~~~~~i~~~~~  257 (378)
                      ..+.++||+||++++|...+..+...|.+++.+.|    +++|++.+. +    .|... ++..|  + ...+.+.....
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR----~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVAR----REDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence            45789999999999999999999999999999996    566665442 2    33222 33322  2 23344444333


Q ss_pred             CC-CCCcEEEeCCCC
Q 017064          258 NL-PEPALGFNCVGG  271 (378)
Q Consensus       258 ~~-g~~Dvvid~~g~  271 (378)
                      .. +.+|+.|+++|-
T Consensus        80 ~~~~~IdvLVNNAG~   94 (265)
T COG0300          80 ERGGPIDVLVNNAGF   94 (265)
T ss_pred             hcCCcccEEEECCCc
Confidence            32 349999999994

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.19  E-value=0.0024  Score=53.69  Aligned_cols=77  Identities=21%  Similarity=0.191  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-C--cEEEccCccc-----HHHHHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-A--DEVFTESQLE-----VKNVKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a--~~vi~~~~~~-----~~~i~~~~~~~  259 (378)
                      .|-+|||+|+++++|+..++-....|-+||++.|    ++++++.++..- .  ..+.|-.+.+     ++.+++..+  
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR----~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P--   77 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGR----NEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP--   77 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC----cHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC--
Confidence            4789999999999999999999999999999985    788888776422 2  2223333322     233444444  


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                       ..+++|+|+|-
T Consensus        78 -~lNvliNNAGI   88 (245)
T COG3967          78 -NLNVLINNAGI   88 (245)
T ss_pred             -chheeeecccc
Confidence             48999999983

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.19  E-value=0.0056  Score=52.59  Aligned_cols=99  Identities=16%  Similarity=0.173  Sum_probs=63.0

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCC-CcEEEccCcccHHHHHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLG-ADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g-a~~vi~~~~~~~~~i~~~  255 (378)
                      ...+.++++||-.|+ |. |..++++|+..+  .+++++.    .+++..+.+    +.+| .+.+.... .+..+....
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD----~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~  107 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVD----KDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFT  107 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhh
Confidence            367889999999998 55 999999998764  4677776    355555544    3466 33222111 111221111


Q ss_pred             hcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064          256 LANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~  290 (378)
                      ..+  .+|.||...+..    .+..+.+.|+++|+++..
T Consensus       108 ~~~--~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        108 INE--KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             cCC--CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence            122  499999866543    346778899999999853

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.19  E-value=0.0017  Score=58.71  Aligned_cols=83  Identities=14%  Similarity=0.119  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .++++||+|+++  ++|.+.++.+...|++|+++.+... ..++.+ ..+++|....+..+-.+   ++. +.+.....|
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            578999999986  9999999999889999988765311 122222 22345644333223222   222 222223334


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|++|+++|.
T Consensus        85 ~iD~lVnnAG~   95 (271)
T PRK06505         85 KLDFVVHAIGF   95 (271)
T ss_pred             CCCEEEECCcc
Confidence            69999999984

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.18  E-value=0.0043  Score=55.06  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC--Cc-EEEccCcccHHHHH----HHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--a~-~vi~~~~~~~~~i~----~~~~~~  259 (378)
                      .+.++||+|++|++|...++.+...|++|+++.|.    .++.+.+ ..+.  .. ..+..+-.+.+.+.    ......
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN----EEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45799999999999999998888889999999864    3333222 2222  21 12222222222222    221222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +.+|++|.++|.
T Consensus        80 ~~~d~vi~~ag~   91 (251)
T PRK07231         80 GSVDILVNNAGT   91 (251)
T ss_pred             CCCCEEEECCCC
Confidence            359999999985

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0058  Score=55.20  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=47.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE----EccCcc-cHHH-HHHHhcCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV----FTESQL-EVKN-VKGLLANLP  260 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v----i~~~~~-~~~~-i~~~~~~~g  260 (378)
                      +++|+|++|++|...++.+...|++|+++.+.    +++.    +.++..+...+    .|..+. .... +.+.....+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRD----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            68999999999999999888899998887753    3332    22233444321    233322 1222 222222233


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        78 ~id~lv~~ag~   88 (272)
T PRK07832         78 SMDVVMNIAGI   88 (272)
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.15  E-value=0.021  Score=46.78  Aligned_cols=100  Identities=14%  Similarity=0.150  Sum_probs=64.5

Q ss_pred             HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+..+ .-.|++++|.|= |-+|...++.++.+|++|+++.    .++-+.-.+..-|.+..         .+.+
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e----~DPi~alqA~~dGf~v~---------~~~~   74 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTE----IDPIRALQAAMDGFEVM---------TLEE   74 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-----SSHHHHHHHHHTT-EEE----------HHH
T ss_pred             HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEE----CChHHHHHhhhcCcEec---------CHHH
Confidence            4555554444 567999999998 9999999999999999999887    35655555555565432         2333


Q ss_pred             HhcCCCCCcEEEeCCCCccH--HHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~  292 (378)
                      ...   ..|++|.++|...+  .+-++.|+++--+..+|.
T Consensus        75 a~~---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   75 ALR---DADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             HTT---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             HHh---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence            333   38999999998553  678889998888777773

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0025  Score=57.08  Aligned_cols=80  Identities=23%  Similarity=0.286  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHh-CCCc-EEEccCcccHHHHHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD-EVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~ga~-~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .+++++|.|+++++|...++.+...|++|+++.+.    .++.+.    +.. .+.. ..+..+-.+.+.+.+.....+.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence            46899999999999999999888899999988853    333322    222 2322 2232232333444444333346


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.003  Score=56.65  Aligned_cols=83  Identities=13%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHH----HHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~~D  263 (378)
                      +.++||.|++|++|...++.+...|++|+++.+.....++..+.++..+.... +..+-.+.+.+    .......+++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35799999999999999999889999999988642111111222334444322 22222222222    22222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.|+|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999974

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.14  E-value=0.0029  Score=60.02  Aligned_cols=107  Identities=16%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      ....+..+.+..++++|++||-.|+  +.|..+..+++..|++|+++.    .+++..+.+++.....-+.....+   .
T Consensus       152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giD----lS~~~l~~A~~~~~~l~v~~~~~D---~  222 (383)
T PRK11705        152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVT----ISAEQQKLAQERCAGLPVEIRLQD---Y  222 (383)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhccCeEEEEECc---h
Confidence            4455666666788999999999997  678888999998899998887    577887777653322111111112   1


Q ss_pred             HHHhcCCCCCcEEEeC-----CCC----ccHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNC-----VGG----NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+ .+  .+|.|+..     +|.    ..++.+.+.|+|||.++...
T Consensus       223 ~~l-~~--~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        223 RDL-NG--QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hhc-CC--CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            222 22  49998743     333    23477889999999998764

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0025  Score=56.91  Aligned_cols=77  Identities=16%  Similarity=0.061  Sum_probs=50.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE-EEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~-vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      +.++||+|++|++|...++.+...|++|+++++.    .++.+.+    +..+... ++..+-.+.+.+.+...+  ++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW--DVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC--CCC
Confidence            4689999999999999999999999999998863    3332222    2333322 222222233445554443  499


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99999983

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.12  E-value=0.0052  Score=55.00  Aligned_cols=117  Identities=19%  Similarity=0.221  Sum_probs=77.9

Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----  234 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----  234 (378)
                      +.+++++|      -..++..+.+..+++||++||=.|+  |-|.+++.+|+..|++|++++    -++++.+.++    
T Consensus        49 ~~~tL~eA------Q~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvT----lS~~Q~~~~~~r~~  116 (283)
T COG2230          49 PDMTLEEA------QRAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVT----LSEEQLAYAEKRIA  116 (283)
T ss_pred             CCCChHHH------HHHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEee----CCHHHHHHHHHHHH
Confidence            33455555      3456667777899999999999997  778999999999999999999    5666665553    


Q ss_pred             hCCCcEEEccCcccHHHHHHHhcCCCCCcEEE-----eCCCCc----cHHHHHHhcccCCEEEEEecC
Q 017064          235 GLGADEVFTESQLEVKNVKGLLANLPEPALGF-----NCVGGN----SASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       235 ~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi-----d~~g~~----~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +.|...-+   +...+..+...+   .||-|+     +.+|..    .+..+.++|+++|++.+..-.
T Consensus       117 ~~gl~~~v---~v~l~d~rd~~e---~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         117 ARGLEDNV---EVRLQDYRDFEE---PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             HcCCCccc---EEEecccccccc---ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            46654111   000111112211   266665     345542    247888999999999887743

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0027  Score=58.22  Aligned_cols=80  Identities=14%  Similarity=0.148  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cEE---EccCcc-cHHH-HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DEV---FTESQL-EVKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga--~~v---i~~~~~-~~~~-i~~~~~~~  259 (378)
                      .|+++||+|++|++|...++.+...|++|+++.+    ++++.+ ..++++.  +..   .|..+. .++. +.+.....
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDL----EEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999988885    344433 3344542  211   222221 1222 22222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        84 g~id~vI~nAG~   95 (296)
T PRK05872         84 GGIDVVVANAGI   95 (296)
T ss_pred             CCCCEEEECCCc
Confidence            459999999985

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0028  Score=55.77  Aligned_cols=84  Identities=13%  Similarity=0.063  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv  264 (378)
                      +++++||+|++|++|...++.+...|++|+++.+......+..+.+...+...+ .|..+. ..+. +.......+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            478999999999999999998888899999988643212222222333343322 122221 1222 1222222235999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      ||+++|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9999874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.09  E-value=0.002  Score=57.68  Aligned_cols=77  Identities=14%  Similarity=0.130  Sum_probs=48.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEEccCcccHHHH----HHHhcCCCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTESQLEVKNV----KGLLANLPEP  262 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~vi~~~~~~~~~i----~~~~~~~g~~  262 (378)
                      ++||+|+++++|...++.+...|++|+++.+.    +++.+    .+++.+..+.+..+-.+.+.+    .......+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRN----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999888899999988753    33322    223334333333332222222    2222233459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        78 d~li~naG~   86 (259)
T PRK08340         78 DALVWNAGN   86 (259)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0038  Score=55.94  Aligned_cols=85  Identities=13%  Similarity=0.062  Sum_probs=52.2

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc--EEEccCcccHHHHHH----Hh
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKG----LL  256 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~i~~----~~  256 (378)
                      ...-++.++||+|++|++|...+..+...|++|+++.+.    ++..+.+ ......  .++..+-.+.+.+..    ..
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAKVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHH
Confidence            334577999999999999999999999999999888853    3333222 222211  222222222222221    11


Q ss_pred             cCCCCCcEEEeCCCCc
Q 017064          257 ANLPEPALGFNCVGGN  272 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~  272 (378)
                      ...+++|+||.++|..
T Consensus        82 ~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         82 ERFGGLDVLVNNAGIA   97 (264)
T ss_pred             HHhCCCCEEEECCCCC
Confidence            1122499999999854

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0027  Score=57.05  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCc-EEEccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~-~vi~~~~~~~~~i----~~~~~~  258 (378)
                      ++.++||+|++|++|...++.+...|++|+++.+.    +++.+.    ++..+.. .++..+-.+.+.+    ......
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999888899999988853    333222    2223322 2222222222222    222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        85 ~~~id~vi~~Ag~   97 (263)
T PRK07814         85 FGRLDIVVNNVGG   97 (263)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.06  E-value=0.013  Score=52.45  Aligned_cols=106  Identities=14%  Similarity=0.207  Sum_probs=63.4

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC-CCc-EEE--ccCcc-cHHH-HHHHhcC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-GAD-EVF--TESQL-EVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~-ga~-~vi--~~~~~-~~~~-i~~~~~~  258 (378)
                      .|++++|+|++  +++|.+.++.+...|++|+.+.+.. ..+++.+.+ .++ +.. ..+  |-.+. .++. +.+....
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            46899999997  7999999988888999998876532 123333333 333 222 222  22221 2222 2223333


Q ss_pred             CCCCcEEEeCCCCc-------cH-----------------------HHHHHhcccCCEEEEEecCC
Q 017064          259 LPEPALGFNCVGGN-------SA-----------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-------~~-----------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .|++|++|+|+|..       .+                       +..+..++++|+++.++...
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~  150 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG  150 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence            34699999998731       00                       12345566789999988543

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0089  Score=53.50  Aligned_cols=78  Identities=18%  Similarity=0.098  Sum_probs=48.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC-Cc-EEE--ccCcc-cHHH-HHHHhcC-CCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-AD-EVF--TESQL-EVKN-VKGLLAN-LPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-a~-~vi--~~~~~-~~~~-i~~~~~~-~g~  261 (378)
                      +++||+|++|++|...++.+...|++|+++.+    +.++.+.+ ..++ .. .++  |..+. .+.+ +...... .++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI----NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999988888999999885    34444333 3332 11 222  22222 1222 2222111 235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.|+|.
T Consensus        78 id~vi~~ag~   87 (260)
T PRK08267         78 LDVLFNNAGI   87 (260)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06196 oxidoreductase; Provisional

Probab=97.05  E-value=0.0032  Score=58.31  Aligned_cols=80  Identities=21%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHH----HhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKG----LLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~----~~~~~g~~  262 (378)
                      .+.+|+|+|++|++|...+..+...|++|+++.|.    .++.+ ...++..-.++..+-.+.+.+.+    .....+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~----~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR----PDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999888899999998863    33332 22233212233222222222222    22222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus       101 D~li~nAg~  109 (315)
T PRK06196        101 DILINNAGV  109 (315)
T ss_pred             CEEEECCCC
Confidence            999999983

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.004  Score=55.43  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+++++|+|++|++|...++.+...|++|+++.+..   .++.+.... +....+..+-.+.+.+.+..+   ++|++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~---~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK---INNSESNDE-SPNEWIKWECGKEESLDKQLA---SLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc---hhhhhhhcc-CCCeEEEeeCCCHHHHHHhcC---CCCEEEE
Confidence            368999999999999999998888999999888642   122221111 112233223233344554443   4999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9985

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.011  Score=53.67  Aligned_cols=83  Identities=17%  Similarity=0.136  Sum_probs=49.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEccCccc---HHHHHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLE---VKNVKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~vi~~~~~~---~~~i~~~~~~~g~~  262 (378)
                      +.++||+|++|++|...+..+...|++|+++.+..+..++..+.....+.   -.++..+-.+   .+.+.+.....+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            57899999999999999998888899999988642111111122222332   1222222222   22233333333459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.|+|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999884

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0035  Score=56.04  Aligned_cols=80  Identities=18%  Similarity=0.113  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      .|++|+|+|++|++|...++.+...|++|+++.+    ++.+.+ ...+++...+ .|..+. ...+ +.......+++|
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI----DPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999889999998875    333333 2334544322 232222 1222 222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (255)
T PRK06057         82 IAFNNAGI   89 (255)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK06194 hypothetical protein; Provisional

Probab=97.04  E-value=0.004  Score=56.67  Aligned_cols=84  Identities=24%  Similarity=0.270  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHH----hcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGL----LANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~----~~~~g~~  262 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+.....++..+.+...+... ++..+-.+.+.+.+.    ....+.+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999888889999888753211111112222224332 232232222222222    2222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0028  Score=57.47  Aligned_cols=84  Identities=20%  Similarity=0.150  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..+..++..+.++..|.+. .+..+-.+.+.+.    ......|.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999988899999887753211111112223344432 2222222222222    222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999984

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.04  E-value=0.0029  Score=53.33  Aligned_cols=88  Identities=16%  Similarity=0.214  Sum_probs=60.3

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -.|.+|.|+|. |.+|+..+++++.+|++|++..+.    ..........+...         ..+.++...   .|+|+
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~----~~~~~~~~~~~~~~---------~~l~ell~~---aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS----PKPEEGADEFGVEY---------VSLDELLAQ---ADIVS   96 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS----CHHHHHHHHTTEEE---------SSHHHHHHH----SEEE
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc----CChhhhccccccee---------eehhhhcch---hhhhh
Confidence            34899999999 999999999999999999999853    33322234444321         123333333   89999


Q ss_pred             eCCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      .+... +.    + ...+..|+++..+|.++
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hhhccccccceeeeeeeeeccccceEEEecc
Confidence            88873 21    2 67899999999988876

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.0081  Score=58.60  Aligned_cols=82  Identities=15%  Similarity=0.191  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEE-EccCcc-cHHHHHH-HhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEV-FTESQL-EVKNVKG-LLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~~v-i~~~~~-~~~~i~~-~~~~~g~~D  263 (378)
                      +++++||+|++|++|...++.+...|++|+++.+..  ..++ .+...+++...+ +|..+. ..+.+.. .....+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA--AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999887531  2233 333445665432 233322 2222222 222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus       287 ~vi~~AG~  294 (450)
T PRK08261        287 IVVHNAGI  294 (450)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.02  E-value=0.011  Score=52.72  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=62.3

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCccc---HHH-HHHHhcCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLE---VKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~---~~~-i~~~~~~~  259 (378)
                      .|++++|+|++  +++|.+.++.+...|++|+++.+.    ++..+.++++...  +.+..+-.+   .++ +.+.....
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN----DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc----hHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            57899999998  699999999888899999988753    2222233333211  222222222   222 22222223


Q ss_pred             CCCcEEEeCCCCcc------------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      |.+|++|+++|...                              .+..+..++.+|+++.++...
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~  146 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG  146 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence            45999999998310                              022345666789998887543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.02  E-value=0.0032  Score=50.45  Aligned_cols=91  Identities=16%  Similarity=0.191  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHH-HHHhCCCc--EEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGAD--EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+.+++|.|+ |++|.+++..+...|++ ++++.|    +.+|.+ +++.++..  .++..+     ++.....   .+|
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR----t~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~---~~D   77 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR----TPERAEALAEEFGGVNIEAIPLE-----DLEEALQ---EAD   77 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES----SHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHH---TES
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC----CHHHHHHHHHHcCccccceeeHH-----HHHHHHh---hCC
Confidence            4789999999 99999999999999997 666654    455544 44455322  223322     2323333   399


Q ss_pred             EEEeCCCCccH---HHHHHhccc-CCEEEEEe
Q 017064          264 LGFNCVGGNSA---SKVLKFLSQ-GGTMVTYG  291 (378)
Q Consensus       264 vvid~~g~~~~---~~~~~~l~~-~G~~v~~g  291 (378)
                      +||+|++....   ...+....+ -+.++.++
T Consensus        78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla  109 (135)
T PF01488_consen   78 IVINATPSGMPIITEEMLKKASKKLRLVIDLA  109 (135)
T ss_dssp             EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-
T ss_pred             eEEEecCCCCcccCHHHHHHHHhhhhceeccc
Confidence            99999987543   333333322 24666665

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0043  Score=56.05  Aligned_cols=79  Identities=13%  Similarity=0.041  Sum_probs=50.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEE--ccCcc-cHHH-HHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      +.++||+||+|++|...++.+...|++|+++.+    ++++.+. ...++....+  |..+. ..+. +.......+++|
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDL----DEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID   80 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999888888999988875    4444433 3344422222  22221 1221 222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        81 ~li~~ag~   88 (273)
T PRK07825         81 VLVNNAGV   88 (273)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0035  Score=55.94  Aligned_cols=80  Identities=15%  Similarity=0.134  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    .++.+    .++..+... .+..+-.+.+.    +.+....
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARH----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999988753    33332    223334322 22222112122    2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        84 ~g~id~lv~~ag~   96 (253)
T PRK05867         84 LGGIDIAVCNAGI   96 (253)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999884

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0035  Score=55.92  Aligned_cols=83  Identities=14%  Similarity=0.177  Sum_probs=49.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~D  263 (378)
                      |+++||+|+++++|...++.+...|++|+++.+.....++..+.++..+.. ..+..+-.+   .+. +.+.....+.+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            478999999999999999999999999988875321111111222223322 233333222   222 222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999974

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0054  Score=54.78  Aligned_cols=81  Identities=17%  Similarity=0.166  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCC-cEEEccCcccHHHH----HHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA-DEVFTESQLEVKNV----KGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga-~~vi~~~~~~~~~i----~~~~~  257 (378)
                      ..+++++|+|++|++|...+..+...|++|+++.+    ++++.+.+    +..+. ..++..+-.+.+.+    .....
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR----RVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999889999998885    34443322    22222 22332222222222    22222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+.+|++|+++|.
T Consensus        83 ~~~~~d~li~~ag~   96 (258)
T PRK06949         83 EAGTIDILVNNSGV   96 (258)
T ss_pred             hcCCCCEEEECCCC
Confidence            22359999999984

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.011  Score=53.90  Aligned_cols=108  Identities=16%  Similarity=0.220  Sum_probs=63.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLP  260 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g  260 (378)
                      -.+.++||+|++|++|...+..+...|++|+.+.+..... ++..+.++..|... .+..+-.+.+.    +.+.....+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999988888899998887642111 12223333344332 22222222211    222222223


Q ss_pred             CCcEEEeCCCCcc----H-----------------------HHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGNS----A-----------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~~----~-----------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|++|.++|...    +                       +.+...+++.|++|.++...
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            5999999988410    0                       12344556778999988543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.97  E-value=0.0048  Score=55.08  Aligned_cols=82  Identities=15%  Similarity=0.205  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..  .++..+.++..+.+.. +..+-.+   +.. +.+.....|++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999989999998876431  2222334445554322 2222222   222 22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0039  Score=55.54  Aligned_cols=84  Identities=21%  Similarity=0.288  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .+++++|+|++|++|...++.+...|++|+++.+.....++..+.++..+... .+..+-.+   ... +.......|++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999998864211111223333444332 22222221   111 11222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.005  Score=54.95  Aligned_cols=80  Identities=15%  Similarity=0.259  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~  258 (378)
                      .+++++|+|+++++|...+..+...|++|+.+.+.    +++.+    .++..+.+. .+..+-.+.+.    +.+....
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR----QAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999888899999998864    33332    233344332 22222222222    2222223


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+.+|++|+++|.
T Consensus        81 ~~~id~li~~ag~   93 (254)
T PRK07478         81 FGGLDIAFNNAGT   93 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            3459999999984

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0049  Score=55.13  Aligned_cols=85  Identities=19%  Similarity=0.193  Sum_probs=51.6

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCC-cHHHHHHHHhCCC-c-EEEccCccc---HHH-HHHHhc
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAG-SDEAKEKLKGLGA-D-EVFTESQLE---VKN-VKGLLA  257 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~~ga-~-~vi~~~~~~---~~~-i~~~~~  257 (378)
                      +..+.+|||+||+|++|...++-+... |++|+++.|..+. .++..+.++..+. + +++..+-.+   .++ +.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            566789999999999999999876666 5899999875321 1222233444443 1 233222222   222 333332


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                       .+++|++|.++|.
T Consensus        85 -~g~id~li~~ag~   97 (253)
T PRK07904         85 -GGDVDVAIVAFGL   97 (253)
T ss_pred             -cCCCCEEEEeeec
Confidence             2359999988875

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.95  E-value=0.013  Score=49.99  Aligned_cols=78  Identities=18%  Similarity=0.173  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC----CCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .+.+++|+|++|++|...+..+...|++|+++.|    +.++.+.+ ..+    +.... ..+..+.+++.+...+   .
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R----~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~---~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR----DLERAQKAADSLRARFGEGVG-AVETSDDAARAAAIKG---A   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhhcCCcEE-EeeCCCHHHHHHHHhc---C
Confidence            5689999999999999988888888999888875    34444333 222    33221 1111223344444443   9


Q ss_pred             cEEEeCCCCcc
Q 017064          263 ALGFNCVGGNS  273 (378)
Q Consensus       263 Dvvid~~g~~~  273 (378)
                      |+||.++....
T Consensus        99 diVi~at~~g~  109 (194)
T cd01078          99 DVVFAAGAAGV  109 (194)
T ss_pred             CEEEECCCCCc
Confidence            99999888655

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0043  Score=55.66  Aligned_cols=86  Identities=17%  Similarity=0.181  Sum_probs=50.9

Q ss_pred             cCCCCEEEEeCCCc-hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEE--E--ccCcc-cHHHHH-HHhc
Q 017064          186 LNSGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEV--F--TESQL-EVKNVK-GLLA  257 (378)
Q Consensus       186 ~~~g~~VlV~g~~g-~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~v--i--~~~~~-~~~~i~-~~~~  257 (378)
                      +..++++||+|++| ++|...++.+...|++|+++.+.....++..+.+++ +|...+  +  |..+. ..+.+. ....
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            44578999999986 899999999999999988877432111111222222 454332  2  22221 122222 2222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999984

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.94  E-value=0.011  Score=56.46  Aligned_cols=110  Identities=15%  Similarity=0.243  Sum_probs=64.5

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH---HHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      .+-..+.+|||+|++|.+|...+..+...|.+|++++|......   ...+......-..++..+-.+.+.+.+...+.+
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            34456789999999999999999998888999999987532111   011111222222233233233344544443321


Q ss_pred             -CCcEEEeCCCCcc------H-------HHHHHhcccC--CEEEEEecC
Q 017064          261 -EPALGFNCVGGNS------A-------SKVLKFLSQG--GTMVTYGGM  293 (378)
Q Consensus       261 -~~Dvvid~~g~~~------~-------~~~~~~l~~~--G~~v~~g~~  293 (378)
                       ++|+||+|++...      .       ...++.+...  +++|+++..
T Consensus       135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence             3999999987421      1       2334444333  478888754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.93  E-value=0.0083  Score=52.83  Aligned_cols=74  Identities=22%  Similarity=0.323  Sum_probs=58.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      |+|.|++|.+|...++.+...+.+|.+.+|..  +.++.+.++..|+..+ ..+-.+.+.+.+...|   +|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g---~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAEVV-EADYDDPESLVAALKG---VDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTT---CSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccceEe-ecccCCHHHHHHHHcC---CceEEeecCc
Confidence            79999999999999999998999999999863  4556677788999654 4444455677777765   9999999984

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0042  Score=57.44  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|++++|+|+++++|...+..+...|++|++++|.
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~   47 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN   47 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999998888899999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0041  Score=55.91  Aligned_cols=35  Identities=23%  Similarity=0.289  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|++++|+|+++++|...++.+...|++|+++.+.
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999988864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.91  E-value=0.0062  Score=54.06  Aligned_cols=82  Identities=17%  Similarity=0.240  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~~  262 (378)
                      .|+++||+|++|++|...++.+...|++|+.+.+..  ..+..+.+++++.. ..+..+-.+.+.+    .+.....+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999988888999999888531  22223444455533 2222222222222    2222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999984

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0051  Score=55.31  Aligned_cols=80  Identities=16%  Similarity=0.162  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~  258 (378)
                      +++++||+|++|++|...++.+...|++|+++.+.    .++.    +.+...+.. ..+..+-.+.+.    +......
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999888899999998853    2222    122233332 222222222222    2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|.++|.
T Consensus        84 ~~~iD~vi~~ag~   96 (264)
T PRK07576         84 FGPIDVLVSGAAG   96 (264)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999998873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.90  E-value=0.0062  Score=54.64  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCc-EEEccCccc---HHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLE---VKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    ++++.+.+. +++.. ..+..+-.+   .+. +.......+.
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLER----SAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999998889999998875    344444333 34432 222222211   211 2222223345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        81 id~li~~ag~   90 (263)
T PRK06200         81 LDCFVGNAGI   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999999983

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.017  Score=50.96  Aligned_cols=106  Identities=16%  Similarity=0.192  Sum_probs=62.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      ++.+++|+|++|++|...++.+...|++++.+.+..... .+..+.+...+.. ..+..+-.+.+.+    .+.....++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999988877532100 1111223334432 2222222222222    222222235


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +|++|.++|...                          ++.++..++.+|+++.++..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            999999998421                          01234455567899998743

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0048  Score=55.12  Aligned_cols=81  Identities=16%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-EEEccCcccHHH----HHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKN----VKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~----i~~~~~  257 (378)
                      -.+.+++|+|+++++|...+..+...|++|+++.+.    +++.+.+    ...+.. +.+..+-.+.+.    +.....
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999888999999988853    3332222    222332 122222222222    222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+.+|++|.++|.
T Consensus        79 ~~g~~d~vi~~ag~   92 (258)
T PRK07890         79 RFGRVDALVNNAFR   92 (258)
T ss_pred             HcCCccEEEECCcc
Confidence            22359999999974

>PRK06720 hypothetical protein; Provisional

Probab=96.89  E-value=0.0092  Score=49.79  Aligned_cols=84  Identities=14%  Similarity=0.186  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .+..++|.|+++++|...+..+...|++|+++.+.....++..+.+...|... .+..+-.+.+++.    +.....|++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999998888889999888753211111112233334332 2323322222222    222333469


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        95 DilVnnAG~  103 (169)
T PRK06720         95 DMLFQNAGL  103 (169)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0053  Score=54.54  Aligned_cols=84  Identities=11%  Similarity=0.109  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .+.+++|+|++|++|...++.+...|++|+++.+.....++-.+.+++.+.. ..+..+-.+.+.+.    +.....+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999888888999999886421111111222222322 22322222222222    122122359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.88  E-value=0.0016  Score=58.72  Aligned_cols=102  Identities=24%  Similarity=0.286  Sum_probs=61.7

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEV  249 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~  249 (378)
                      -+..+.+.+++++|++||-.|+  |-|..+..+|+..|++|++++    .++++.+.+    ++.|...  .+...  + 
T Consensus        50 k~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~git----lS~~Q~~~a~~~~~~~gl~~~v~v~~~--D-  120 (273)
T PF02353_consen   50 KLDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGIT----LSEEQAEYARERIREAGLEDRVEVRLQ--D-  120 (273)
T ss_dssp             HHHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEE----S-HHHHHHHHHHHHCSTSSSTEEEEES----
T ss_pred             HHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEe--e-
Confidence            3445566789999999999997  488999999999999999999    567766655    3566321  11111  1 


Q ss_pred             HHHHHHhcCCCCCcEEEe-----CCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          250 KNVKGLLANLPEPALGFN-----CVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid-----~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                        .+.+..   .+|.|+.     .+|...    ++.+.+.|+|||+++.-.
T Consensus       121 --~~~~~~---~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  121 --YRDLPG---KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             --GGG------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             --ccccCC---CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence              112222   3998864     444322    477889999999987544

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.88  E-value=0.0056  Score=54.66  Aligned_cols=84  Identities=21%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.....++..+.+++.|... .+..+-.+.+.+.    ......+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999888889999888753211111122233334322 2222222222222    222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.87  E-value=0.012  Score=52.17  Aligned_cols=82  Identities=20%  Similarity=0.125  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH---HHHHHhCCCcEEE-ccCcccHHH----HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA---KEKLKGLGADEVF-TESQLEVKN----VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~---~~~~~~~ga~~vi-~~~~~~~~~----i~~~~~~~  259 (378)
                      +++++||+|++|++|...++.+...|++|++..+..  ...+   .+.++..+..... ..+-.+.+.    +.+.....
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN--SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC--hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999988865421  2222   2223344544332 222222222    22222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|+++|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            359999999985

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.87  E-value=0.0072  Score=54.06  Aligned_cols=83  Identities=17%  Similarity=0.180  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.. ..++..+...+.+... .+..+-.+.+.    +.+.....|.+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999988999999888641 1122223333444332 23222222222    22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK06484 short chain dehydrogenase; Validated

Probab=96.86  E-value=0.013  Score=58.25  Aligned_cols=103  Identities=21%  Similarity=0.304  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+ .+++.... +  |..+. ..+. +.+.....|.
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR----DAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988889999999885    34444433 33554322 2  22221 1222 2222223345


Q ss_pred             CcEEEeCCCCc----c-----------------------HHHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|..    .                       .+.++..++.+|+++.++...
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~  403 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA  403 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            99999999842    0                       022345556679999998543

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0045  Score=55.00  Aligned_cols=80  Identities=20%  Similarity=0.152  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHh--CCCc-EEEccCcccHHHHH----HHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKG--LGAD-EVFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~--~ga~-~vi~~~~~~~~~i~----~~~~~~  259 (378)
                      .+.+++|+|++|++|...++.+...|++|+.+.+.    .++.. ...+  .+.. ..+..+-.+.+.+.    +.....
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD----AEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999998887889999998864    22222 2222  2322 22322222222222    222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|.++|.
T Consensus        80 ~~id~vi~~ag~   91 (252)
T PRK06138         80 GRLDVLVNNAGF   91 (252)
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.004  Score=57.35  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|++|+|+|++|++|...++.+...|++|+++.|.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~   49 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN   49 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999999999999998888889999988863

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.85  E-value=0.0097  Score=54.30  Aligned_cols=144  Identities=13%  Similarity=0.182  Sum_probs=78.6

Q ss_pred             CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH--HHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA--LRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta--~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      .+.+|++....+.    +.++-..+......+..++.+-.+    ....|.  ...+..  ...++++||-.|+ |. |.
T Consensus       105 p~~~g~~~~i~p~----w~~~~~~~~~~~i~ldpg~aFgtG----~h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~  172 (288)
T TIGR00406       105 PVQFGKRFWICPS----WRDVPSDEDALIIMLDPGLAFGTG----THPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GI  172 (288)
T ss_pred             CEEEcCeEEEECC----CcCCCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hH
Confidence            3566887666543    333322234456666666544332    122232  223332  2457899999998 54 88


Q ss_pred             HHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc----H
Q 017064          204 CIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----A  274 (378)
Q Consensus       204 ~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----~  274 (378)
                      .++.+++ .|+ +|+++.    .++...+.+++    .+....+.....+   ......+  +||+|+.+.....    +
T Consensus       173 lai~aa~-~g~~~V~avD----id~~al~~a~~n~~~n~~~~~~~~~~~~---~~~~~~~--~fDlVvan~~~~~l~~ll  242 (288)
T TIGR00406       173 LSIAALK-LGAAKVVGID----IDPLAVESARKNAELNQVSDRLQVKLIY---LEQPIEG--KADVIVANILAEVIKELY  242 (288)
T ss_pred             HHHHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCcceEEEecc---cccccCC--CceEEEEecCHHHHHHHH
Confidence            8877766 466 666665    35555555443    2322111000000   1111122  5999997665432    3


Q ss_pred             HHHHHhcccCCEEEEEe
Q 017064          275 SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g  291 (378)
                      ....+.|++||.++..|
T Consensus       243 ~~~~~~LkpgG~li~sg  259 (288)
T TIGR00406       243 PQFSRLVKPGGWLILSG  259 (288)
T ss_pred             HHHHHHcCCCcEEEEEe
Confidence            56789999999998876

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0046  Score=55.52  Aligned_cols=80  Identities=16%  Similarity=0.152  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC--CC-cEEEccCcccHH---HHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GA-DEVFTESQLEVK---NVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--ga-~~vi~~~~~~~~---~i~~~~~~~g  260 (378)
                      ++.++||+|++|++|...+..+...|++|+++.+.    +++.+.+ .++  +. ...+..+-.+.+   .+.+.....+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN----AEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            46789999999999999999888899999998853    3333322 222  21 122222222222   2222111123


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|++|.++|.
T Consensus        80 ~id~lv~~ag~   90 (263)
T PRK09072         80 GINVLINNAGV   90 (263)
T ss_pred             CCCEEEECCCC
Confidence            59999999985

>PRK08264 short chain dehydrogenase; Validated

Probab=96.85  E-value=0.0081  Score=52.92  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+.+++|+|++|++|...++.+...|+ +|+++.+.    .++.+.   .+.. .++..+-.+.+.+.+.....+.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC----hhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            467999999999999999999998999 88888753    333221   2222 22222222333444444333458999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |.++|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999986

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0059  Score=53.66  Aligned_cols=83  Identities=16%  Similarity=0.180  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCC-C
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLP-E  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g-~  261 (378)
                      .|++++|.|+++++|...+..+...|++|+++.+.....++..+.+++.|.+. .+..+..+.+.+    .+.....| .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888899999888754211111122333445432 222222222222    22222223 5


Q ss_pred             CcEEEeCCC
Q 017064          262 PALGFNCVG  270 (378)
Q Consensus       262 ~Dvvid~~g  270 (378)
                      +|++|+++|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999997

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.84  E-value=0.0073  Score=53.21  Aligned_cols=79  Identities=15%  Similarity=0.109  Sum_probs=50.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHH-HHHHhcCCCCCcE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKN-VKGLLANLPEPAL  264 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g~~Dv  264 (378)
                      ++++||+|+++++|...++.+...|++|+++.+..   ++..+.++..|+. .+..+-.+   .+. +.+.....+++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            46899999999999999998888999999988642   2223344455543 23222222   222 2222222335999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus        78 lv~~ag~   84 (236)
T PRK06483         78 IIHNASD   84 (236)
T ss_pred             EEECCcc
Confidence            9999984

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.83  E-value=0.0051  Score=55.24  Aligned_cols=83  Identities=12%  Similarity=0.132  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ccCcc-cHHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g  260 (378)
                      .|++++|+|+++  ++|.+.++.+...|++|+.+.+.. ..++..+.+ .+.|....+  |-.+. .++. +.+.....|
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            568999999986  899999888888899998876431 112223323 334544333  22221 2222 222223334


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        86 ~iDilVnnag~   96 (260)
T PRK06603         86 SFDFLLHGMAF   96 (260)
T ss_pred             CccEEEEcccc
Confidence            69999999873

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.82  E-value=0.0081  Score=53.91  Aligned_cols=80  Identities=18%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEE--ccCcc-cHH-HHHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EVK-NVKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi--~~~~~-~~~-~i~~~~~~~g~  261 (378)
                      ++++++|+|++|++|...++.+...|++|+++.+    +.++.+.+.+ .+.. ..+  |..+. ... .+.+.....++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK----SAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999998889999998875    3444444433 3322 122  22221 111 12232222345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        80 id~li~~Ag~   89 (262)
T TIGR03325        80 IDCLIPNAGI   89 (262)
T ss_pred             CCEEEECCCC
Confidence            9999999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.82  E-value=0.006  Score=55.23  Aligned_cols=83  Identities=14%  Similarity=0.265  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .+++++|+|++|++|...++.+...|++|+++.+..+..++..+.+++.|.. ..+..+-.+.+.    +.+.....+.+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999889999998885321111112222333432 222222222222    22222223459


Q ss_pred             cEEEeCCC
Q 017064          263 ALGFNCVG  270 (378)
Q Consensus       263 Dvvid~~g  270 (378)
                      |++|.++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.0067  Score=54.50  Aligned_cols=83  Identities=16%  Similarity=0.137  Sum_probs=50.1

Q ss_pred             CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .++++||+|+  ++++|.+.++.+...|++|+++.+.+ ...++.+.+ ++.|....+..+-.+   ++. +.+.....|
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4689999996  57999999988888999998875421 122333323 334433333222222   222 222223334


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            69999999974

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.0079  Score=54.42  Aligned_cols=85  Identities=15%  Similarity=0.092  Sum_probs=52.5

Q ss_pred             cCCCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc---HHH-HHHHhcC
Q 017064          186 LNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE---VKN-VKGLLAN  258 (378)
Q Consensus       186 ~~~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~---~~~-i~~~~~~  258 (378)
                      +-.++++||+|++  +++|...++.+...|++|+.+.+.+ ...++.+.+ +++|....+..+-.+   .+. +.+....
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            4457899999996  7999999988888999998776421 122333333 345643333323222   222 2222233


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        86 ~g~iD~lv~nAG~   98 (272)
T PRK08159         86 WGKLDFVVHAIGF   98 (272)
T ss_pred             cCCCcEEEECCcc
Confidence            3469999999973

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.81  E-value=0.019  Score=51.45  Aligned_cols=107  Identities=11%  Similarity=0.088  Sum_probs=62.9

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCC--CcHHHHHHHHhCCC-cEEEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRA--GSDEAKEKLKGLGA-DEVFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~--~~~~~~~~~~~~ga-~~vi~~~~~~~~~----i~~~~~~  258 (378)
                      .|++++|+|++  +++|...++.+...|++|+++.+..+  ..++..+.+.+.+. ...+..+-.+.+.    +.+....
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46899999985  79999999888889999987754321  12223333333222 2222222222222    2222222


Q ss_pred             CCCCcEEEeCCCCc-------cH-----------------------HHHHHhcccCCEEEEEecCC
Q 017064          259 LPEPALGFNCVGGN-------SA-----------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-------~~-----------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .|++|++|+++|..       .+                       +..+..++.+|+++.++...
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            34599999999831       11                       22455666789999887543

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.006  Score=54.62  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+++++|+|+++++|...++.+...|++|+++.+.
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~   40 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLD   40 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999888999999988853

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0065  Score=53.15  Aligned_cols=77  Identities=16%  Similarity=0.138  Sum_probs=48.6

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++++|+|++|++|...++.+...|++|+++.+..    ++.+.+++++....+..+-.+   ...+.+...+. ++|++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP----QQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ-RFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC----cchHHHHhccccceEEcCCCCHHHHHHHHHHhhcC-CCCEEE
Confidence            4799999999999999988888899999988642    222233333322222222122   23333333322 499999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .++|.
T Consensus        77 ~~ag~   81 (225)
T PRK08177         77 VNAGI   81 (225)
T ss_pred             EcCcc
Confidence            99874

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.78  E-value=0.02  Score=53.05  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=62.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|+|+||+|-+|...+..+...|.+|++++|.    .++...+...|.+.+. .+-.+.+.+.+...+   +|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~----~~~~~~l~~~~v~~v~-~Dl~d~~~l~~al~g---~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN----LRKASFLKEWGAELVY-GDLSLPETLPPSFKG---VTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC----hHHhhhHhhcCCEEEE-CCCCCHHHHHHHHCC---CCEEEECCC
Confidence            69999999999999999888889999999963    3343444445654432 222233455555554   999999876


Q ss_pred             Ccc-----H--------HHHHHhcccCC--EEEEEecC
Q 017064          271 GNS-----A--------SKVLKFLSQGG--TMVTYGGM  293 (378)
Q Consensus       271 ~~~-----~--------~~~~~~l~~~G--~~v~~g~~  293 (378)
                      ...     +        ...++.++..|  ++|+++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            321     1        23444444444  88888753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.77  E-value=0.0095  Score=53.18  Aligned_cols=81  Identities=15%  Similarity=0.189  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv  264 (378)
                      .+++++|+|+++++|...++.+...|++|+++.+.   .++..+.++..+...+ .|-.+. .++. +.......+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS---AENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999888899999887643   3344444444443222 122221 1222 2222222335999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|.|+|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999975

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.77  E-value=0.018  Score=51.91  Aligned_cols=96  Identities=19%  Similarity=0.305  Sum_probs=70.3

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++...+..+....---.|++|+|.|.+..+|.-++.++...|++|+++-+.   +                    
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~---t--------------------  192 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR---S--------------------  192 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---c--------------------
Confidence            35677777777777664323568999999997779999999999999999877621   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~  293 (378)
                         ..+.+.+.   ..|+||.++|.+.+ ..  ++++++-.++.+|..
T Consensus       193 ---~~l~~~~~---~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        193 ---KDMASYLK---DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             ---hhHHHHHh---hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence               01222333   39999999998754 32  568999899999854

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.77  E-value=0.012  Score=54.27  Aligned_cols=99  Identities=17%  Similarity=0.230  Sum_probs=64.5

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHH----HHhCCCcEEEccCcccHHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~----~~~~ga~~vi~~~~~~~~~i~~~  255 (378)
                      +...++++++||..|+ | .|..++.+++..+.  +|+++.    .+++..+.    ++..|.+.+..... +..   +.
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVD----is~~~l~~Ar~~l~~~g~~nV~~i~g-D~~---~~  143 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVRRLGIENVIFVCG-DGY---YG  143 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEeC-Chh---hc
Confidence            3467889999999998 4 69999999998764  566665    35554433    34567664432221 111   11


Q ss_pred             hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEE
Q 017064          256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~  290 (378)
                      ....+.+|+|+.+.+.... ...++.|+++|+++..
T Consensus       144 ~~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        144 VPEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ccccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            1111249999998876444 5678999999998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.008  Score=53.70  Aligned_cols=83  Identities=17%  Similarity=0.158  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~  262 (378)
                      .|.++||+|++|++|...++.+...|++|+++.+... ..+..+.++..+... .+..+-.+.+.+    .......+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP-DDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChh-hHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999888888999998886432 111122233344332 222222222222    2222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999984

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0093  Score=52.89  Aligned_cols=80  Identities=16%  Similarity=0.127  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEE-EccCccc---HHHH-HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV-FTESQLE---VKNV-KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~v-i~~~~~~---~~~i-~~~~~~~g~  261 (378)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++. +..+++|.... +..+-.+   ...+ .......++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR----DPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999988875    33333 23345554422 2222112   2221 122222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        81 id~vi~~ag~   90 (249)
T PRK06500         81 LDAVFINAGV   90 (249)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK08017 oxidoreductase; Provisional

Probab=96.76  E-value=0.0084  Score=53.43  Aligned_cols=76  Identities=21%  Similarity=0.246  Sum_probs=52.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcc-cH----HHHHHHhcCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQL-EV----KNVKGLLANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~-~~----~~i~~~~~~~g~~D  263 (378)
                      ++++|+|++|++|...++.+...|++|+++.+    +.++.+.+++.++..+. |..+. ..    +.+....++  .+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~--~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR----KPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDN--RLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC--CCe
Confidence            57999999999999999999999999988874    55666666666765432 32222 11    222222222  489


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      .++.++|.
T Consensus        77 ~ii~~ag~   84 (256)
T PRK08017         77 GLFNNAGF   84 (256)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.75  E-value=0.008  Score=53.78  Aligned_cols=80  Identities=19%  Similarity=0.249  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-EEEccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~i----~~~~~~  258 (378)
                      ++.++||+|++|++|...++.+...|++|+.+.+.    .++.+.+    +..+.. ..+..+-.+.+.+    .++...
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK----AEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999888899999888853    3333222    233332 2232222222222    222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+.+|.+|.++|.
T Consensus        87 ~~~id~vi~~ag~   99 (259)
T PRK08213         87 FGHVDILVNNAGA   99 (259)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999884

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.029  Score=49.86  Aligned_cols=33  Identities=18%  Similarity=0.219  Sum_probs=29.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      .++++||+|+++++|...++.+...|++|+++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~   35 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY   35 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence            468999999999999999999999999988765

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0091  Score=52.75  Aligned_cols=81  Identities=21%  Similarity=0.253  Sum_probs=50.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHH----HHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKN----VKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~----i~~~~~  257 (378)
                      ..+++++|+|++|++|...+..+...|++|+++.+.    +++.+.    +++.+... .+..+-.+.+.    +.....
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARS----QDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999998899999998863    333222    22333222 22222222222    222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+++|++|.++|.
T Consensus        80 ~~~~id~lv~~ag~   93 (241)
T PRK07454         80 QFGCPDVLINNAGM   93 (241)
T ss_pred             HcCCCCEEEECCCc
Confidence            23459999999984

>PRK07985 oxidoreductase; Provisional

Probab=96.75  E-value=0.021  Score=52.28  Aligned_cols=107  Identities=12%  Similarity=0.139  Sum_probs=62.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-CcHHH-HHHHHhCCCcE-EE--ccCcc-cHHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEA-KEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-~~~~~-~~~~~~~ga~~-vi--~~~~~-~~~~-i~~~~~~~g  260 (378)
                      .++++||+|+++++|...++.+...|++|+++.+... ...++ .+.+++.|... .+  |-.+. .... +.+.....|
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5679999999999999999999889999987654311 01111 12223344332 22  22221 1211 222333334


Q ss_pred             CCcEEEeCCCCcc----H-----------------------HHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGNS----A-----------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~~----~-----------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|+++.++|...    +                       +.++..++.+|++|.++...
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~  188 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ  188 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence            5999999987410    0                       22344556789999987543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.74  E-value=0.013  Score=55.14  Aligned_cols=82  Identities=17%  Similarity=0.203  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|.+|||+|++|.+|...++.+...|.+|+++.+...........+ ..+.. ..+..+-.+.+.+.+.....+ +|+||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~vi   80 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL-NLAKKIEDHFGDIRDAAKLRKAIAEFK-PEIVF   80 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH-hhcCCceEEEccCCCHHHHHHHHhhcC-CCEEE
Confidence            4689999999999999999999989999998876532222111111 11111 122222233445555554433 89999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      ++++.
T Consensus        81 h~A~~   85 (349)
T TIGR02622        81 HLAAQ   85 (349)
T ss_pred             ECCcc
Confidence            99984

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08589 short chain dehydrogenase; Validated

Probab=96.74  E-value=0.0093  Score=53.89  Aligned_cols=83  Identities=19%  Similarity=0.247  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+++.+. +..++..+.+++.+.. ..+  |-.+. .+.. +.......|++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999998888889999998853 1111112233333432 222  22221 1221 22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.73  E-value=0.0072  Score=53.59  Aligned_cols=84  Identities=13%  Similarity=0.099  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHH----HhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKG----LLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~----~~~~~g~~  262 (378)
                      .+.++||+|++|++|...+..+...|++|+++.|......+..+.+.+.+.. .++..+-.+.+.+.+    .....+.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999888888999999986421112222233333432 222222222222222    22222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999875

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.73  E-value=0.014  Score=54.91  Aligned_cols=94  Identities=19%  Similarity=0.148  Sum_probs=67.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCC--CcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG--ADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g--a~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|||.|+ |++|+.+++.+.+.| .+|+++.|    +.++.+.+....  --..+..+..+.+.+.++..+   +|+||
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR----s~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~---~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR----SKEKCARIAELIGGKVEALQVDAADVDALVALIKD---FDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeC----CHHHHHHHHhhccccceeEEecccChHHHHHHHhc---CCEEE
Confidence            47999999 999999999988888 78888885    566666665432  222222333445567777775   79999


Q ss_pred             eCCCCccHHHHH-HhcccCCEEEEEe
Q 017064          267 NCVGGNSASKVL-KFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~~~~~~-~~l~~~G~~v~~g  291 (378)
                      +|........++ .|++.|=.++...
T Consensus        74 n~~p~~~~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          74 NAAPPFVDLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             EeCCchhhHHHHHHHHHhCCCEEEcc
Confidence            999987665555 6777777777765

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.011  Score=53.56  Aligned_cols=80  Identities=18%  Similarity=0.179  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEE--ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+.+.+ .+.. ..+  |..+. .... +.......+.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR----SEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC----CHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999988888999999885    4444444433 2221 122  22221 1111 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        79 ~d~vv~~ag~   88 (277)
T PRK06180         79 IDVLVNNAGY   88 (277)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PLN02253 xanthoxin dehydrogenase

Probab=96.71  E-value=0.0079  Score=54.51  Aligned_cols=80  Identities=15%  Similarity=0.194  Sum_probs=48.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCC--c-EEEccCcccHHHH----HHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGA--D-EVFTESQLEVKNV----KGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga--~-~vi~~~~~~~~~i----~~~~~~~  259 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    +++. +...+++.  . ..+..+-.+.+.+    .......
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ----DDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            36899999999999999998888889999988753    2222 22233321  1 2222222222222    2222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        93 g~id~li~~Ag~  104 (280)
T PLN02253         93 GTLDIMVNNAGL  104 (280)
T ss_pred             CCCCEEEECCCc
Confidence            359999999974

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.01  Score=52.96  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+.+.+.    .+..+...++....  .+..+-.+.+.+.+    .....++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999998888899999988853    33333333322111  22222222222222    2222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        90 ~d~vi~~ag~   99 (255)
T PRK06841         90 IDILVNSAGV   99 (255)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.71  E-value=0.011  Score=52.85  Aligned_cols=82  Identities=18%  Similarity=0.178  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+.+.+.  ..++..+.+++.+... .+..+-.+   ... +.+.....+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV--EPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc--chHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999998899999876532  1233334444455332 22222222   222 22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0079  Score=53.53  Aligned_cols=84  Identities=17%  Similarity=0.244  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .+.++||+|+++++|...++.+...|++|+.+.+.....++..+.+.+.+.. +.+..+-.+   .+. +.+.....+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999889999998885321111111222233432 222222222   221 22222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999999983

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.011  Score=54.57  Aligned_cols=35  Identities=23%  Similarity=0.147  Sum_probs=31.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|++++|+|+++++|...++.+...|++|+++.+.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999998899999998864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.69  E-value=0.0077  Score=54.09  Aligned_cols=83  Identities=13%  Similarity=0.104  Sum_probs=49.8

Q ss_pred             CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .++++||+|+  ++++|.+.++.+...|++|+.+.+.. ...++.+ ...+++....+..+-.+   .+. +.......|
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            4689999996  57999999988888999998764321 1233333 23345543333222222   222 222222234


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        84 ~iD~lvnnAG~   94 (260)
T PRK06997         84 GLDGLVHSIGF   94 (260)
T ss_pred             CCcEEEEcccc
Confidence            69999999974

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.69  E-value=0.01  Score=53.51  Aligned_cols=85  Identities=21%  Similarity=0.295  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc---E---EEccCc-ccHHH-HHHHhcC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---E---VFTESQ-LEVKN-VKGLLAN  258 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~---~---vi~~~~-~~~~~-i~~~~~~  258 (378)
                      -.|+.+||+|++.++|.+.+..+...|++|+++.|..+..++....+...+..   .   ..|... ++.+. +......
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999986421111222222333332   1   122221 22222 2222222


Q ss_pred             -CCCCcEEEeCCCC
Q 017064          259 -LPEPALGFNCVGG  271 (378)
Q Consensus       259 -~g~~Dvvid~~g~  271 (378)
                       .|++|+.++++|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence             3469999999985

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.68  E-value=0.0088  Score=53.34  Aligned_cols=84  Identities=15%  Similarity=0.115  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+.+.+......+..+.++..+... .+..+-.+   .+. +.......+.+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999888899999988753211111112223333322 22222222   222 22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.68  E-value=0.0099  Score=52.99  Aligned_cols=84  Identities=15%  Similarity=0.132  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .+.++||+|++|++|...++.+...|.+|+++.+.....++....++..+... .+..+-.+.+.+.    ......+.+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999888889999999864211111112223334332 2322222222222    222222349


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.0073  Score=54.02  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=49.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC--c-EEEccCcccHHHH----HHHhcCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVFTESQLEVKNV----KGLLANLP  260 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga--~-~vi~~~~~~~~~i----~~~~~~~g  260 (378)
                      +.++||+|++|++|...++.+...|++|+++.+    +.++.+.+ .++..  + ..+..+-.+.+.+    .+.....|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVAR----RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999888888999998875    34443322 22221  1 1222222222222    22333334


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|++|+++|.
T Consensus        78 ~id~lv~~ag~   88 (257)
T PRK07024         78 LPDVVIANAGI   88 (257)
T ss_pred             CCCEEEECCCc
Confidence            58999999884

>PRK08643 acetoin reductase; Validated

Probab=96.66  E-value=0.0099  Score=53.04  Aligned_cols=83  Identities=14%  Similarity=0.151  Sum_probs=49.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccH---HH-HHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEV---KN-VKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~---~~-i~~~~~~~g~~D  263 (378)
                      ++++||+|++|++|...++.+...|++|+++.+..+..++....+...+... .+..+-.+.   .+ +.+.....+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999998899999988854211111112223333322 222222221   22 222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999974

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.65  E-value=0.01  Score=52.98  Aligned_cols=80  Identities=18%  Similarity=0.214  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i----~~~~~~  258 (378)
                      .+++|||+|+++++|...+..+...|++++++.+.    .++.+    .++..+.+. ++..+-.+.+.+    ......
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999888899999988753    33322    223334332 222222222222    222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|.++|.
T Consensus        86 ~~~~d~li~~ag~   98 (255)
T PRK06113         86 LGKVDILVNNAGG   98 (255)
T ss_pred             cCCCCEEEECCCC
Confidence            3459999999984

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.64  E-value=0.012  Score=52.83  Aligned_cols=84  Identities=14%  Similarity=0.120  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .+.+++|+|+++++|...+..+...|++|+++.+..+..++..+.++..|... .+..+-.+.+.+.    +.....+.+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            56899999999999999888888889999888753211111222333445432 2222222222222    222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999984

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.64  E-value=0.0097  Score=55.23  Aligned_cols=79  Identities=19%  Similarity=0.249  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCCcE----EEccCc---ccHHHHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADE----VFTESQ---LEVKNVKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga~~----vi~~~~---~~~~~i~~~  255 (378)
                      .|++++|+||++++|...++.+...|++|+.+.|.    +++.+.+    ++ .+...    ..|-.+   ...+.+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~  127 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN----PDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET  127 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence            48999999999999999998888889999998863    4443322    22 22111    123322   122345554


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .++.. +|++|+++|.
T Consensus       128 ~~~~d-idilVnnAG~  142 (320)
T PLN02780        128 IEGLD-VGVLINNVGV  142 (320)
T ss_pred             hcCCC-ccEEEEecCc
Confidence            44432 6799999874

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.63  E-value=0.02  Score=47.61  Aligned_cols=96  Identities=19%  Similarity=0.223  Sum_probs=63.5

Q ss_pred             hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch-HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc
Q 017064          166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI-VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (378)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~-~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~  244 (378)
                      ....|+...++...+.....--.|.+|+|.|+ |. +|..++..++..|++|+++.+.   .                  
T Consensus        21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~---~------------------   78 (168)
T cd01080          21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSK---T------------------   78 (168)
T ss_pred             CCccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECC---c------------------
Confidence            34556555556655555444457899999999 65 6998999999999987766632   1                  


Q ss_pred             CcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          245 SQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                           +++.+...   .+|+||.+++.+.+ --.+.++++-.++.++.
T Consensus        79 -----~~l~~~l~---~aDiVIsat~~~~i-i~~~~~~~~~viIDla~  117 (168)
T cd01080          79 -----KNLKEHTK---QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGI  117 (168)
T ss_pred             -----hhHHHHHh---hCCEEEEcCCCCce-ecHHHccCCeEEEEccC
Confidence                 12222333   39999999998653 12235677767777764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.015  Score=52.93  Aligned_cols=36  Identities=14%  Similarity=0.115  Sum_probs=31.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      -.++++||+|+++++|...++.+...|++|+++.+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~   39 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG   39 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence            467899999999999999998888899999887643

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.62  E-value=0.0084  Score=53.23  Aligned_cols=81  Identities=17%  Similarity=0.219  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~  258 (378)
                      ++.++||+|++|++|...+..+...|++|+++...   +.++.    +.++..+.... +..+-.+.+.+.    +....
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR---SRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999998899998775321   22222    23334454322 222222222222    22222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+.+|++|.++|.
T Consensus        80 ~~~id~vi~~ag~   92 (250)
T PRK08063         80 FGRLDVFVNNAAS   92 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.018  Score=51.43  Aligned_cols=84  Identities=20%  Similarity=0.179  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..... ++..+.++..+... .+..+-.+   ..+ +.+.....+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999887642111 11122333444332 22222212   222 2222222345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK09242 tropinone reductase; Provisional

Probab=96.58  E-value=0.011  Score=52.70  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|++++|+|+++++|...+..+...|++|+++.+.
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~   42 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD   42 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            47899999999999999999999999999988863

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.57  E-value=0.016  Score=55.40  Aligned_cols=77  Identities=13%  Similarity=0.225  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC-cEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA-DEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .|++++|+||+|++|...+..+...|++|+++.+.    +++.+ .....+. ...+..+-.+.+.+.+..+   ++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~----~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN----SDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEE
Confidence            46899999999999999998888889999988753    33322 2221111 1222222233445555544   49999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            999874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.57  E-value=0.057  Score=46.42  Aligned_cols=92  Identities=12%  Similarity=0.111  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|||.|+ |.+|...+..+...|++|+++...  ..++-.+.+.. |.-. +.........+    .   ++|+||-
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~--~~~~l~~l~~~-~~i~-~~~~~~~~~~l----~---~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE--LTENLVKLVEE-GKIR-WKQKEFEPSDI----V---DAFLVIA   76 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC--CCHHHHHHHhC-CCEE-EEecCCChhhc----C---CceEEEE
Confidence            4689999999 999999888888889998877632  22332333333 2111 11111111111    1   3999999


Q ss_pred             CCCCccHHHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +++.+..+..+...+..+.++.+.
T Consensus        77 aT~d~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         77 ATNDPRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             cCCCHHHHHHHHHHHHhCCcEEEC
Confidence            999988866655444556666665

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.57  E-value=0.018  Score=51.86  Aligned_cols=82  Identities=21%  Similarity=0.212  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .|+++||+|+++  ++|.+.++.+...|++|+.+.+.. ..++..+.+. +.+....+..+-.+   ++. +.......|
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            478999999975  899998888888899988776431 1122233332 23322333222222   222 222223334


Q ss_pred             CCcEEEeCCC
Q 017064          261 EPALGFNCVG  270 (378)
Q Consensus       261 ~~Dvvid~~g  270 (378)
                      .+|++|+++|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6999999998

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.56  E-value=0.015  Score=51.20  Aligned_cols=84  Identities=14%  Similarity=0.215  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      ++.++||+|++|++|...++.+...|.+|+++.+.....+.....++..+....+   |..+. .... +.......+.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999988888999988886421111112233344543322   22221 1111 22222222358


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |.+|.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999975

>PRK05717 oxidoreductase; Validated

Probab=96.55  E-value=0.019  Score=51.17  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~  261 (378)
                      .|++++|+|++|++|...+..+...|++|+++.+    +.++. +..+.++... .+..+-.+.+.    +.+.....|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL----DRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999888888999988764    33332 2333444322 22222112111    2333333345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        85 id~li~~ag~   94 (255)
T PRK05717         85 LDALVCNAAI   94 (255)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.55  E-value=0.0096  Score=53.26  Aligned_cols=83  Identities=18%  Similarity=0.288  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.. ...+..+.+...+.+.. +  |..+. .... +.+.....+.+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999998888999998887531 11122223333444322 2  22221 1111 22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (260)
T PRK12823         86 DVLINNVGG   94 (260)
T ss_pred             eEEEECCcc
Confidence            999999973

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.54  E-value=0.035  Score=49.24  Aligned_cols=104  Identities=15%  Similarity=0.215  Sum_probs=62.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH---HHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGADE-VFTESQLEVKN----VKGLLANLP  260 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g  260 (378)
                      +.++||.|++|++|...++.+...|++++.+++..  .++..   ..+++.+... .+..+-.+...    +.......+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999988888999988777531  12222   2233444332 22222222222    222222223


Q ss_pred             CCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .+|++|.++|...                          .+.++..++..|+++.++...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence            4999999998310                          123455666789999998644

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.54  E-value=0.015  Score=51.30  Aligned_cols=84  Identities=15%  Similarity=0.224  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .+.+++|.|++|++|...+..+...|++|+++.+.....++..+.++..+... ++..+-.+.+.    +.......+.+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            35789999999999999998888899999998864211111112223333322 22222222222    22222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.52  E-value=0.014  Score=52.34  Aligned_cols=80  Identities=15%  Similarity=0.191  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HH---H-hCCCc-EEEccCcccHHHH----HHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KL---K-GLGAD-EVFTESQLEVKNV----KGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~---~-~~ga~-~vi~~~~~~~~~i----~~~~~  257 (378)
                      .++++||+|+++++|...+..+...|++|+.+.+.   ++++.+ ..   + ..|.. ..+..+-.+.+.+    .+...
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS---NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999888899999887643   233322 11   1 23432 2232222222222    22222


Q ss_pred             CCCCCcEEEeCCC
Q 017064          258 NLPEPALGFNCVG  270 (378)
Q Consensus       258 ~~g~~Dvvid~~g  270 (378)
                      ..+++|++|+++|
T Consensus        84 ~~g~id~lv~nAg   96 (260)
T PRK08416         84 DFDRVDFFISNAI   96 (260)
T ss_pred             hcCCccEEEECcc
Confidence            2345999999986

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.01  Score=52.31  Aligned_cols=35  Identities=23%  Similarity=0.332  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++++|+|++|++|...++.+...|++|+++.|.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~   39 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH   39 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            45799999999999999999888899999998864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.51  E-value=0.014  Score=52.21  Aligned_cols=34  Identities=12%  Similarity=0.068  Sum_probs=30.1

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++||+|++|++|...+..+...|++++.+.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~   35 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN   35 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999999999998888889999888753

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.51  E-value=0.037  Score=50.04  Aligned_cols=147  Identities=16%  Similarity=0.231  Sum_probs=84.4

Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHH--HHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~g~~VlV~g~~g~~G~~  204 (378)
                      .+.|++....++    |.+|..-.....+++.+++.|    .....+.|  +..+|.+.  +++|.+||=+|+  +.|.+
T Consensus       109 ~rig~~f~I~Ps----w~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~lcL~~Le~~--~~~g~~vlDvGc--GSGIL  176 (300)
T COG2264         109 VRIGERFVIVPS----WREYPEPSDELNIELDPGLAF----GTGTHPTTSLCLEALEKL--LKKGKTVLDVGC--GSGIL  176 (300)
T ss_pred             EEeeeeEEECCC----CccCCCCCCceEEEEcccccc----CCCCChhHHHHHHHHHHh--hcCCCEEEEecC--ChhHH
Confidence            566888777654    555533324667888888744    23444444  34444432  469999999997  56777


Q ss_pred             HHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH----HH
Q 017064          205 IIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----SK  276 (378)
Q Consensus       205 av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~----~~  276 (378)
                      ++..+| +|++.+..+|.   .+...+.    ++..+............  .....+  +.+|+|+.+.=...+    .+
T Consensus       177 aIAa~k-LGA~~v~g~Di---Dp~AV~aa~eNa~~N~v~~~~~~~~~~~--~~~~~~--~~~DvIVANILA~vl~~La~~  248 (300)
T COG2264         177 AIAAAK-LGAKKVVGVDI---DPQAVEAARENARLNGVELLVQAKGFLL--LEVPEN--GPFDVIVANILAEVLVELAPD  248 (300)
T ss_pred             HHHHHH-cCCceEEEecC---CHHHHHHHHHHHHHcCCchhhhcccccc--hhhccc--CcccEEEehhhHHHHHHHHHH
Confidence            765444 57764444443   3433333    33445442110000010  111111  259999977744332    67


Q ss_pred             HHHhcccCCEEEEEecC
Q 017064          277 VLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g~~  293 (378)
                      ..+.++|+|++++.|-.
T Consensus       249 ~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         249 IKRLLKPGGRLILSGIL  265 (300)
T ss_pred             HHHHcCCCceEEEEeeh
Confidence            78999999999998833

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.015  Score=51.86  Aligned_cols=35  Identities=20%  Similarity=0.243  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~   39 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR   39 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            47899999999999999999988899999988853

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.50  E-value=0.05  Score=48.31  Aligned_cols=77  Identities=23%  Similarity=0.252  Sum_probs=48.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcE-EEccCcccHHHH----HHHhcCCCCCcE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQLEVKNV----KGLLANLPEPAL  264 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~Dv  264 (378)
                      +++|.|++|++|...+..+...|++|+++.+    ++++.+.+. .++... .+..+-.+.+.+    .+.....+++|+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGR----RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999889999998885    444444332 344332 222222222222    222222235999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|.++|.
T Consensus        78 vi~~ag~   84 (248)
T PRK10538         78 LVNNAGL   84 (248)
T ss_pred             EEECCCc
Confidence            9999874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.50  E-value=0.018  Score=53.51  Aligned_cols=34  Identities=29%  Similarity=0.389  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .+++++|+|++|++|...++.+...|++|+++.|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r   38 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR   38 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC
Confidence            4679999999999999999888888999999885

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.49  E-value=0.014  Score=48.67  Aligned_cols=100  Identities=19%  Similarity=0.167  Sum_probs=66.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc------------------CcccHHH
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE------------------SQLEVKN  251 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~------------------~~~~~~~  251 (378)
                      -+|+|+|+ |.+|+.|+++++.+|++|++..    ...++.+.....++..+...                  .......
T Consensus        21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (168)
T PF01262_consen   21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPD----ERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN   95 (168)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHTT-EEEEEE----SSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHhHCCCEEEecc----CCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence            68999998 9999999999999999999887    46777777777777554331                  0111123


Q ss_pred             HHHHhcCCCCCcEEEeCCC---C--ccH--HHHHHhcccCCEEEEEecCCCCC
Q 017064          252 VKGLLANLPEPALGFNCVG---G--NSA--SKVLKFLSQGGTMVTYGGMSKKP  297 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g---~--~~~--~~~~~~l~~~G~~v~~g~~~~~~  297 (378)
                      +.+....   +|++|.+.-   .  +.+  ...++.|+++.-++.+....+..
T Consensus        96 f~~~i~~---~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG~  145 (168)
T PF01262_consen   96 FAEFIAP---ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGGS  145 (168)
T ss_dssp             HHHHHHH----SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-S
T ss_pred             HHHHHhh---CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCCC
Confidence            4444443   899985332   1  222  77888999999898887444433

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.47  E-value=0.0061  Score=46.78  Aligned_cols=92  Identities=21%  Similarity=0.228  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HcCCcEEEEecCCCCcHHHHHHHHh----CCC-cEE-EccCcccHHHHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKG----LGA-DEV-FTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~~~~~~~~~~~~~~----~ga-~~v-i~~~~~~~~~i~~~~~~~g  260 (378)
                      ||++||-.|+  +.|..++.+++ ..+++++++.    .+++..+.+++    .+. +.+ +...  +   +.......+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~i~~~~~--d---~~~~~~~~~   69 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVD----ISPEMLEIARERAAEEGLSDRITFVQG--D---AEFDPDFLE   69 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHHHHHTTTTTTEEEEES--C---CHGGTTTSS
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHhcCCCCCeEEEEC--c---cccCcccCC
Confidence            6789999997  66888899998 5788988887    46666666543    121 111 1111  1   111111112


Q ss_pred             CCcEEEeCC-CC----cc------HHHHHHhcccCCEEEEE
Q 017064          261 EPALGFNCV-GG----NS------ASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       261 ~~Dvvid~~-g~----~~------~~~~~~~l~~~G~~v~~  290 (378)
                      ++|+|+... ..    +.      ++...+.|+|||+++.-
T Consensus        70 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   70 PFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             CEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            499999877 32    12      46788999999998753

...

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.47  E-value=0.042  Score=51.59  Aligned_cols=85  Identities=14%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCCchHHHH--HHHHHHHcCCcEEEEecCCCCcHH------------HHHHHHhCCCcE-EEccCccc---
Q 017064          187 NSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADE-VFTESQLE---  248 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~--av~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~ga~~-vi~~~~~~---  248 (378)
                      ..|+++||+|+++++|++  .++.+ ..|++++++.......+.            -.+.+++.|... .++.+-.+   
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            456899999999999999  45555 789998888642111111            123445667543 34333322   


Q ss_pred             HHH-HHHHhcCCCCCcEEEeCCCCc
Q 017064          249 VKN-VKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       249 ~~~-i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      .+. +..+....|++|+++++++.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            222 222333334699999999975

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=96.46  E-value=0.022  Score=52.10  Aligned_cols=80  Identities=20%  Similarity=0.363  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-Cc---EEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-AD---EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~---~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+..|+|+||+|-+|.+.+..+..+|++|.+++|+.. .+++.+.++++. +.   .++..+-.+.....+...|   .|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g---cd   80 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG---CD   80 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-hhhhHHHHHhcccCcccceEEeccccccchHHHHHhC---CC
Confidence            5689999999999999999999999999999999863 344555666654 21   2222222223345555554   99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      .||.++..
T Consensus        81 gVfH~Asp   88 (327)
T KOG1502|consen   81 GVFHTASP   88 (327)
T ss_pred             EEEEeCcc
Confidence            99998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.46  E-value=0.0057  Score=59.64  Aligned_cols=94  Identities=15%  Similarity=0.169  Sum_probs=58.3

Q ss_pred             HHhccCCCCEEE----EeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCc-ccHHHHHHH
Q 017064          182 DFTTLNSGDSIV----QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQ-LEVKNVKGL  255 (378)
Q Consensus       182 ~~~~~~~g~~Vl----V~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~-~~~~~i~~~  255 (378)
                      .+.++++|+.+|    |+|++|++|.+++|++++.|++|+++.+    ...+....+..+.+ .+++... .+.+++...
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~  102 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANND----GGLTWAAGWGDRFGALVFDATGITDPADLKAL  102 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCc----cccccccCcCCcccEEEEECCCCCCHHHHHHH
Confidence            346778999988    9999899999999999999999998763    22222222223333 2333222 122222211


Q ss_pred             hcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC
Q 017064          256 LANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .               ..+..+++.|.++|+++.++...
T Consensus       103 ~---------------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        103 Y---------------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             H---------------HHHHHHHHhccCCCEEEEEcccc
Confidence            1               12345677788888888887543

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.018  Score=52.03  Aligned_cols=80  Identities=20%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHHHHh----cC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGLL----AN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~~~~----~~  258 (378)
                      +..+++|+|++|++|...++.+...|++|+++.+.    .++.+    .++..+... ++..+-.+.+.+.+..    ..
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARR----VEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            34689999999999999998888889999888753    22222    223344432 2222222222222221    11


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|.++|.
T Consensus        85 ~~~id~vi~~Ag~   97 (274)
T PRK07775         85 LGEIEVLVSGAGD   97 (274)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999985

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.46  E-value=0.022  Score=47.67  Aligned_cols=79  Identities=25%  Similarity=0.384  Sum_probs=54.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--cEE-EccC--c-ccHHH-HHHHhcCCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEV-FTES--Q-LEVKN-VKGLLANLPEP  262 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga--~~v-i~~~--~-~~~~~-i~~~~~~~g~~  262 (378)
                      +..+|.|++.++|.+..|.+...|++|++....   +.+..+.++.+|.  +|. +..+  + .+++. +.+.....|.+
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~---~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD---SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecc---hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            567999999999999999999999999988753   4455566677776  433 2211  1 23332 33333334459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      +++++|+|-
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999994

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.017  Score=51.77  Aligned_cols=83  Identities=17%  Similarity=0.170  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~  262 (378)
                      .+.+++|+|++|++|...++.+...|++|+++.+... ..+..+.+...+... .+..+-.+.+.+    .+.....+.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988889999988875421 111122223334332 222222222222    2222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999999984

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.45  E-value=0.0054  Score=52.93  Aligned_cols=104  Identities=21%  Similarity=0.240  Sum_probs=63.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEE--EccCcccHHHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGL  255 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~i~~~  255 (378)
                      +.+...+++|++||-.|+  +.|+.++-+++..|.  +|+.+-+.+.-.+...+.+..+|.+.+  +..+...     -+
T Consensus        64 ~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-----g~  136 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-----GW  136 (209)
T ss_dssp             HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-----TT
T ss_pred             HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-----cc
Confidence            334577999999999995  778999999998875  466655321111222344455666532  2222111     01


Q ss_pred             hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ... +.||.|+-+.+-+.. ...++.|++||++|..-
T Consensus       137 ~~~-apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi  172 (209)
T PF01135_consen  137 PEE-APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI  172 (209)
T ss_dssp             GGG--SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred             ccC-CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence            111 249999988887666 56779999999999854

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.45  E-value=0.027  Score=47.03  Aligned_cols=98  Identities=27%  Similarity=0.300  Sum_probs=65.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHHHhcC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      .++++|+.++=.|+  +.|..++++|+.. ..+|+++.+    ++++.+..    .++|.+.+..-...-.+.+.    +
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~----~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~----~   99 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIER----DEEALELIERNAARFGVDNLEVVEGDAPEALP----D   99 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEec----CHHHHHHHHHHHHHhCCCcEEEEeccchHhhc----C
Confidence            67899998777776  6688888999544 468999884    56665544    46887744322222112222    2


Q ss_pred             CCCCcEEEeCCCCc---cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGGN---SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...+|.+|---|..   .++.+|..|+++|++|.-.
T Consensus       100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            22399999666642   3488999999999998654

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.013  Score=52.88  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +++++||+|++|++|...++.+...|++|+++.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~   40 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN   40 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999988853

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.026  Score=49.12  Aligned_cols=77  Identities=14%  Similarity=0.101  Sum_probs=50.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .++||+|++|.+|...+..+... .+|+++.+.    .++.+.+. .....+++..+-.+.+.+.+.....+++|.+|.+
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRP----AERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCC----HHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            58999999999999998877766 899988853    33333332 2222233333333445555555443359999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            985

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.43  E-value=0.016  Score=51.73  Aligned_cols=84  Identities=20%  Similarity=0.202  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      ++.+++|.|+++++|...+..+...|++|+++.+..+...+..+.++..|.. ..+  |..+. .+.. +.......+++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999888888999999886321111111222334432 222  22221 1211 22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.42  E-value=0.025  Score=49.06  Aligned_cols=99  Identities=24%  Similarity=0.261  Sum_probs=62.2

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNV  252 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i  252 (378)
                      .+...+++|++||-.|+  +.|..+..+++..+  .+|+++..    +++-.+.+    +..|...  ++..+...    
T Consensus        69 ~~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~----~~~~~~~a~~~l~~~g~~~v~~~~gd~~~----  138 (212)
T PRK13942         69 CELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIER----IPELAEKAKKTLKKLGYDNVEVIVGDGTL----  138 (212)
T ss_pred             HHHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCeEEEECCccc----
Confidence            34467899999999996  67888888888775  47777763    45444444    3455432  22222110    


Q ss_pred             HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g  291 (378)
                       ..... +.+|+|+-.... ......++.|++||+++..-
T Consensus       139 -~~~~~-~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~  176 (212)
T PRK13942        139 -GYEEN-APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV  176 (212)
T ss_pred             -CCCcC-CCcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence             01112 249999765544 33467789999999988754

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.041  Score=49.83  Aligned_cols=103  Identities=18%  Similarity=0.166  Sum_probs=57.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHHHHHHhcCCCCCcE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKNVKGLLANLPEPAL  264 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~i~~~~~~~g~~Dv  264 (378)
                      +++++|.|+ |++|...+..+. .|++|+++.+.....++..+.++..|... .+..+-.+   .+.+.+.....+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899998 799999998875 79999998853211111122233334332 23222222   2222222222345999


Q ss_pred             EEeCCCCcc----H---------------HHHHHhcccCCEEEEEecC
Q 017064          265 GFNCVGGNS----A---------------SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       265 vid~~g~~~----~---------------~~~~~~l~~~G~~v~~g~~  293 (378)
                      +|+++|...    .               +..+..+..+|+++.++..
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            999998521    1               2234455567777777644

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.41  E-value=0.011  Score=52.51  Aligned_cols=37  Identities=22%  Similarity=0.174  Sum_probs=32.7

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..++.+++|.|++|++|...++.+...|++|+++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~   45 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT   45 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence            4578899999999999999998888889999988864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.40  E-value=0.021  Score=50.63  Aligned_cols=84  Identities=12%  Similarity=0.160  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      ++.++||+|++|++|...++.+...|++|+++.+..+...+..+.++..+.. .++..+-.+.+.    +.......+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998889999988875321111111222333322 223333222222    22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999983

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.025  Score=51.06  Aligned_cols=78  Identities=21%  Similarity=0.206  Sum_probs=49.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEEccCcccHHHHH----HHhcCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVFTESQLEVKNVK----GLLANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi~~~~~~~~~i~----~~~~~~g~~D  263 (378)
                      .++||+|++|++|...++.+...|.+|+++.+    +.++.+.++. .+.. .++..+-.+.+.+.    +.....+++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVR----RPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999888888999999885    4555444432 2322 12222222222222    2222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.++|.
T Consensus        79 ~vi~~ag~   86 (276)
T PRK06482         79 VVVSNAGY   86 (276)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK12743 oxidoreductase; Provisional

Probab=96.39  E-value=0.016  Score=51.72  Aligned_cols=83  Identities=12%  Similarity=0.166  Sum_probs=49.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      ++++||+|+++++|...++.+...|++|+++.+...... +..+.++..|... .+..+-.+.+.    +.+.....+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999989999988764321111 1122334455432 22222222211    22222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999984

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.38  E-value=0.085  Score=41.55  Aligned_cols=96  Identities=14%  Similarity=0.218  Sum_probs=63.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH------------------
Q 017064          192 IVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN------------------  251 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~------------------  251 (378)
                      |.|+|++|.+|..+.++.+...  .+|++.+-.. ..+.-.++++++...++.-.++...+.                  
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~-n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS-NIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS-THHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            6799999999999999999887  7888877542 233445677889988887666543222                  


Q ss_pred             --HHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEE
Q 017064          252 --VKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVT  289 (378)
Q Consensus       252 --i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~  289 (378)
                        +.++.... .+|+|+.+..+ .-+...+..++.|-++-+
T Consensus        80 ~~l~~~~~~~-~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   80 EGLEELAEEP-EVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHHTHT-T-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHhcCC-CCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence              22333222 38898887766 445777788887766544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.016  Score=52.36  Aligned_cols=36  Identities=22%  Similarity=0.316  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+..
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA   40 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence            467999999999999999998888899999988653

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.36  E-value=0.029  Score=52.06  Aligned_cols=81  Identities=17%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .+.+|||+|++|.+|...+..+...|.+|+++++......+........+.   -.++..+-.+.+.+.+...+   +|+
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~   80 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG---CET   80 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC---CCE
Confidence            468999999999999999998888999998887643211111111111121   12232222233445555543   999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      ||.++|.
T Consensus        81 vih~A~~   87 (325)
T PLN02989         81 VFHTASP   87 (325)
T ss_pred             EEEeCCC
Confidence            9999984

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.026  Score=51.06  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=49.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      +.+|||+|++|++|...++.+...|.+|+++.+    +.++.+.+. .++.. ..+..+-.+.+.    +.......+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR----DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999888888999998885    344443333 23322 222222222222    22222223359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.|+|.
T Consensus        79 d~vi~~ag~   87 (275)
T PRK08263         79 DIVVNNAGY   87 (275)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.35  E-value=0.056  Score=47.93  Aligned_cols=75  Identities=19%  Similarity=0.152  Sum_probs=47.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .     ....+.. ..+..+-.+.+.    +.+.....+.+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~----~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA----F-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc----h-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999888899999998853    2     1122221 222222122222    22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        78 d~vi~~ag~   86 (252)
T PRK08220         78 DVLVNAAGI   86 (252)
T ss_pred             CEEEECCCc
Confidence            999999985

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.33  E-value=0.023  Score=52.32  Aligned_cols=83  Identities=17%  Similarity=0.127  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcEEE-ccCccc---HHHHH-HHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADEVF-TESQLE---VKNVK-GLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~vi-~~~~~~---~~~i~-~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|++..+..... ++..+.++..|....+ ..+-.+   ...+. .... .|+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence            468999999999999999988888899988876431111 1112233344543322 222222   22222 2222 346


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK09186 flagellin modification protein A; Provisional

Probab=96.32  E-value=0.021  Score=50.91  Aligned_cols=35  Identities=23%  Similarity=0.366  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...+..+...|++|+++.+.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~   37 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADID   37 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence            46899999999999999999998899999988753

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.024  Score=51.06  Aligned_cols=81  Identities=16%  Similarity=0.118  Sum_probs=48.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHHH----HhcCCCCCcEE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKG----LLANLPEPALG  265 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~~----~~~~~g~~Dvv  265 (378)
                      ++||+|++|++|...++.+...|++|+++.+.....++..+.++..+.+.. +..+-.+.+.+.+    .....+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999988888899999888542111111222333343332 2222222222222    22222359999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |.++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999984

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.29  E-value=0.051  Score=44.68  Aligned_cols=89  Identities=10%  Similarity=0.095  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|+|.|+ |.+|.--++.+...|++|+++..      +..+.+.+++... +..+....+.+       .++|+||-
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp------~~~~~l~~l~~i~-~~~~~~~~~dl-------~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP------EICKEMKELPYIT-WKQKTFSNDDI-------KDAHLIYA   76 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC------ccCHHHHhccCcE-EEecccChhcC-------CCceEEEE
Confidence            5689999999 99999888888888999987741      1112223343222 11111111111       13899999


Q ss_pred             CCCCccHHHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +++.+..+..+...+..+.++...
T Consensus        77 aT~d~e~N~~i~~~a~~~~~vn~~  100 (157)
T PRK06719         77 ATNQHAVNMMVKQAAHDFQWVNVV  100 (157)
T ss_pred             CCCCHHHHHHHHHHHHHCCcEEEC
Confidence            999988876665554444455543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.29  E-value=0.026  Score=50.37  Aligned_cols=80  Identities=11%  Similarity=0.092  Sum_probs=49.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+.+ .+++.. ..+..+-.+.+.+    .+.....+.
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADI----KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999888999998875    34433332 333322 2222222222222    222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        81 id~li~~ag~   90 (257)
T PRK07067         81 IDILFNNAAL   90 (257)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.28  E-value=0.063  Score=47.83  Aligned_cols=99  Identities=10%  Similarity=0.103  Sum_probs=59.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-h-CCCcEE-EccCcccHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G-LGADEV-FTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~-~ga~~v-i~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .+.+|||+|++|.+|...++.+...|.+|++++|.    .++..... . .++..+ .|..+. ...+.+....  ++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~----~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~~~--~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD----VDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAIGD--DSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC----HHHHHHhcccCCceEEEEeeCCCC-HHHHHHHhhc--CCCE
Confidence            35789999999999999998888889999998863    33332221 1 122222 122221 2233333321  3999


Q ss_pred             EEeCCCCcc--------------HHHHHHhccc--CCEEEEEecC
Q 017064          265 GFNCVGGNS--------------ASKVLKFLSQ--GGTMVTYGGM  293 (378)
Q Consensus       265 vid~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~  293 (378)
                      ||.++|...              ....++.+..  .+++|+++..
T Consensus        89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            999887421              1234444443  3689888754

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.27  E-value=0.11  Score=44.75  Aligned_cols=92  Identities=13%  Similarity=0.070  Sum_probs=59.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|||.|+ |.+|...++.+...|++|+++...  ..++-.++ .+.|--..+. .+.....    ..   ++|+||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~--~~~~l~~l-~~~~~i~~~~-~~~~~~d----l~---~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE--LESELTLL-AEQGGITWLA-RCFDADI----LE---GAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHH-HHcCCEEEEe-CCCCHHH----hC---CcEEEEE
Confidence            4689999999 999999999999999999877642  22333333 3333222221 1111111    22   3999999


Q ss_pred             CCCCccH-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      +++.+.. .......+..|.+|.+.
T Consensus        76 at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        76 ATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            9998755 45556666778777665

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.028  Score=50.21  Aligned_cols=81  Identities=17%  Similarity=0.180  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~----~~~~~  258 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+.   +.++.+    .++..+... .+..+-.+.+.+.    +....
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR---SRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999998888899999887753   222222    222334332 2222222222222    22222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|.++|.
T Consensus        85 ~~~iD~vi~~ag~   97 (258)
T PRK09134         85 LGPITLLVNNASL   97 (258)
T ss_pred             cCCCCEEEECCcC
Confidence            2359999999984

>PRK09135 pteridine reductase; Provisional

Probab=96.26  E-value=0.028  Score=49.70  Aligned_cols=35  Identities=14%  Similarity=0.176  Sum_probs=31.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            45789999999999999998888889999998864

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.25  E-value=0.044  Score=42.64  Aligned_cols=98  Identities=22%  Similarity=0.248  Sum_probs=61.0

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHHHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNVKGL  255 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i~~~  255 (378)
                      ...+.++++|+-.|+ |. |..+..+++..+ .+++++.    .++...+.+    +.++...  ++..+..+  .... 
T Consensus        14 ~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~-   84 (124)
T TIGR02469        14 KLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIE----RNPEALRLIERNARRFGVSNIVIVEGDAPE--ALED-   84 (124)
T ss_pred             HcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEc----CCHHHHHHHHHHHHHhCCCceEEEeccccc--cChh-
Confidence            356677889999998 44 999999999875 5776665    355555444    3344432  22222111  0111 


Q ss_pred             hcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+  .+|+|+...+..    .++.+.+.|+++|+++...
T Consensus        85 ~~~--~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        85 SLP--EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             hcC--CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            112  499999765433    3477899999999998654

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.23  E-value=0.037  Score=48.78  Aligned_cols=80  Identities=23%  Similarity=0.190  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE-EEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~-vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      ++.++||+|++|++|...++.+...|++|+...+    ..++.+ ....++... ++..+-.+.+.+.+    .....++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT----RVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999888888998776653    333333 333444322 22222222222222    2222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12936         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.23  E-value=0.035  Score=51.44  Aligned_cols=81  Identities=20%  Similarity=0.288  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCC---cEEEccCcccHHHHHHHhcCCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA---DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga---~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      ..|++|||+|++|.+|...+..+...|.+|++++|... ..++...+.. .+.   -.++..+-.+.+.+.+...+   +
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~   78 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG---C   78 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC---C
Confidence            35789999999999999999888888999998887532 1122222211 111   12222222233345554443   9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.+++.
T Consensus        79 d~vih~A~~   87 (322)
T PLN02986         79 DAVFHTASP   87 (322)
T ss_pred             CEEEEeCCC
Confidence            999999973

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.23  E-value=0.024  Score=50.73  Aligned_cols=84  Identities=12%  Similarity=0.168  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH-HHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-AKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~-~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++++++.+......+ ..+.++..+... .+..+-.+.+.    +.......++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999887753211111 112233344332 22222222222    2223333345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.017  Score=51.93  Aligned_cols=77  Identities=14%  Similarity=0.188  Sum_probs=48.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH----HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN----VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~----i~~~~~~~g~~D  263 (378)
                      .+++++|+|++|++|...++.+...|++|+++.+.    .++.+..  .+.. ++..+-.+.+.    +.......|.+|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~----~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN----PARAAPI--PGVE-LLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC----hhhcccc--CCCe-eEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            35789999999999999998888889999998853    2222211  1222 22222222222    222222334599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        76 ~li~~ag~   83 (270)
T PRK06179         76 VLVNNAGV   83 (270)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK05599 hypothetical protein; Provisional

Probab=96.22  E-value=0.019  Score=51.04  Aligned_cols=80  Identities=21%  Similarity=0.181  Sum_probs=46.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCccc---HHH-HHHHhcCCCCCcE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLE---VKN-VKGLLANLPEPAL  264 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~---~~~-i~~~~~~~g~~Dv  264 (378)
                      +++|+|+++++|...+..+. .|++|+.+.|..+..++..+.+++.|.+  ..+..+-.+   .+. +.+.....|++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999998887665 4999999886422111222233444533  233222222   222 2222222345999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9999985

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.22  E-value=0.067  Score=49.16  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=29.0

Q ss_pred             CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEE
Q 017064          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSIN  218 (378)
Q Consensus       188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~  218 (378)
                      .|+++||+|+  +.++|.+.++.+...|++|++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            5899999999  799999999999999999988

>PRK06398 aldose dehydrogenase; Validated

Probab=96.20  E-value=0.021  Score=51.12  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|+++||+|+++++|...+..+...|++|+++.+.
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~   39 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK   39 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999988754

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.20  E-value=0.027  Score=55.50  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=52.7

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +.+|++|+|+|. |..|++++++++..|++|++..+    .+++.+.+++.|+..+...+.  .+.+    .   .+|+|
T Consensus         9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~----~~~~~~~l~~~g~~~~~~~~~--~~~l----~---~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDD----DPDALRPHAERGVATVSTSDA--VQQI----A---DYALV   74 (488)
T ss_pred             ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHhCCCEEEcCcch--HhHh----h---cCCEE
Confidence            567899999999 99999999999999999988552    344455567778754322121  1112    1   38999


Q ss_pred             EeCCCCcc
Q 017064          266 FNCVGGNS  273 (378)
Q Consensus       266 id~~g~~~  273 (378)
                      |.+.|-+.
T Consensus        75 V~SpGi~~   82 (488)
T PRK03369         75 VTSPGFRP   82 (488)
T ss_pred             EECCCCCC
Confidence            99999653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.19  E-value=0.03  Score=52.68  Aligned_cols=78  Identities=17%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhC--CC-cEEEccCcccHHHHHHHhcCCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGL--GA-DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~--ga-~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      ..+.+|||+|++|.+|...++.+...|.+|+++.+.    .++.. ....+  +. -.++..+-.+.+.+.+...+   +
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~   80 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD----PAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG---C   80 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC---C
Confidence            456799999999999999999998889999988753    22222 22222  11 12233332333445555543   9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.+++.
T Consensus        81 d~Vih~A~~   89 (353)
T PLN02896         81 DGVFHVAAS   89 (353)
T ss_pred             CEEEECCcc
Confidence            999999874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.18  E-value=0.048  Score=49.17  Aligned_cols=85  Identities=15%  Similarity=0.114  Sum_probs=55.4

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEc---cCcc---cHHH----H
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFT---ESQL---EVKN----V  252 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~---~~~~---~~~~----i  252 (378)
                      .+.++-.+|+|.|++.++|++.+..++..|++|.++.|    +.+|+..+. +++....+.   +...   +-++    +
T Consensus        28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar----~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~  103 (331)
T KOG1210|consen   28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITAR----SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI  103 (331)
T ss_pred             cccCccceEEEecCcchhhHHHHHHHHHccCceEEEec----cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence            33455579999999999999999999999999999996    556655443 344322221   1111   1122    2


Q ss_pred             HHHhcCCCCCcEEEeCCCCc
Q 017064          253 KGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~  272 (378)
                      .++..-.+.+|.+|.|+|..
T Consensus       104 ~~l~~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  104 EELRDLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hhhhhccCCcceEEEecCcc
Confidence            22222223599999999964

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.17  E-value=0.027  Score=48.58  Aligned_cols=98  Identities=15%  Similarity=0.090  Sum_probs=61.7

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCc---EEEccCcccHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGAD---EVFTESQLEVKNV  252 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~---~vi~~~~~~~~~i  252 (378)
                      +...++++++||=.|+  +.|..+..+++..+  .+|+++..    +++..+.+    +..|..   .++..+...  ..
T Consensus        66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~----~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~--~~  137 (205)
T PRK13944         66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEI----VKELAIYAAQNIERLGYWGVVEVYHGDGKR--GL  137 (205)
T ss_pred             HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCcEEEEECCccc--CC
Confidence            4467789999999986  66888888888764  57777763    44443333    345543   223222111  01


Q ss_pred             HHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                          ...+.+|+|+-+.....+ ...++.|++||+++..-
T Consensus       138 ----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        138 ----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence                111249999977665444 67789999999997653

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.025  Score=50.50  Aligned_cols=79  Identities=14%  Similarity=0.070  Sum_probs=48.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cEEEccCcccHHHHH----HHhcCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DEVFTESQLEVKNVK----GLLANLPE  261 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga--~~vi~~~~~~~~~i~----~~~~~~g~  261 (378)
                      ++++||+|++|++|...+..+...|++|+++.+.    .++.+ ....+..  -+.+..+-.+.+.+.    ......++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID----AAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999998888889999988853    33332 2233321  122222222222222    22222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        78 ~d~vi~~ag~   87 (257)
T PRK07074         78 VDVLVANAGA   87 (257)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.019  Score=50.22  Aligned_cols=75  Identities=13%  Similarity=0.084  Sum_probs=48.2

Q ss_pred             EEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhC--CC-cEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL--GA-DEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       193 lV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~--ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      ||+|++|++|...++.+...|++|+++.+.    .++.+. ...+  +. .+++..+-.+.+.+.+.....+++|++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRS----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            589999999999998888889999988853    333322 2222  22 223333333334454444444469999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        77 ag~   79 (230)
T PRK07041         77 AAD   79 (230)
T ss_pred             CCC
Confidence            984

>PRK06484 short chain dehydrogenase; Validated

Probab=96.16  E-value=0.025  Score=56.28  Aligned_cols=80  Identities=19%  Similarity=0.220  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEE---EccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV---FTESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~v---i~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+.+.+    +.++. +..+++|....   .|..+. ..+. +.+.....|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR----NVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999998875    34443 33445654332   222221 1222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        80 iD~li~nag~   89 (520)
T PRK06484         80 IDVLVNNAGV   89 (520)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.15  E-value=0.039  Score=48.80  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~  258 (378)
                      .+.+++|+|++|++|...+..+...|++|+++.+.   ++++.    +.++..+.+. .+..+-.+.+.    +.+....
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC---cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999998888889999876532   22222    2233344332 23222222222    2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+.+|++|.++|.
T Consensus        82 ~~~id~vi~~ag~   94 (247)
T PRK12935         82 FGKVDILVNNAGI   94 (247)
T ss_pred             cCCCCEEEECCCC
Confidence            3459999999985

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.036  Score=49.48  Aligned_cols=84  Identities=21%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~i~~----~~~~  258 (378)
                      .+.++||+|++|++|...++.+...|++|+++++......++.    +.++..+... .+..+-.+.+.+.+    ....
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999889999777764321222222    2223344332 22222222222222    2222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            2359999999985

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.13  E-value=0.049  Score=49.19  Aligned_cols=102  Identities=15%  Similarity=0.094  Sum_probs=61.1

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhC---CCcEEEccCcccHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL---GADEVFTESQLEVKN  251 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~---ga~~vi~~~~~~~~~  251 (378)
                      ...++.+......+++++|.|+ |++|.+.+..+...|++++++.|    +.++. ++++.+   |.......+     +
T Consensus       104 ~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R----~~~~~~~la~~~~~~~~~~~~~~~-----~  173 (270)
T TIGR00507       104 LVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANR----TVSKAEELAERFQRYGEIQAFSMD-----E  173 (270)
T ss_pred             HHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhhcCceEEechh-----h
Confidence            3344444233455789999999 89999999888888988877764    33443 333333   322222111     1


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccH---H---HHHHhcccCCEEEEEec
Q 017064          252 VKGLLANLPEPALGFNCVGGNSA---S---KVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~---~---~~~~~l~~~G~~v~~g~  292 (378)
                         ...  ...|+||+|++....   .   -....++++..++.+..
T Consensus       174 ---~~~--~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       174 ---LPL--HRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             ---hcc--cCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence               111  139999999986321   1   12456778878877753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.13  E-value=0.028  Score=46.38  Aligned_cols=81  Identities=16%  Similarity=0.288  Sum_probs=45.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCccc---HHH-HHHHhcCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g  260 (378)
                      +++||+|+++++|...++.+...|+++++++... ...++.    +.++..+.... +..+-.+   .+. +.......+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999999988877777555554321 012332    23344563322 2222112   222 222221222


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|++|.|+|.
T Consensus        80 ~ld~li~~ag~   90 (167)
T PF00106_consen   80 PLDILINNAGI   90 (167)
T ss_dssp             SESEEEEECSC
T ss_pred             ccccccccccc
Confidence            59999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=96.12  E-value=0.043  Score=51.58  Aligned_cols=93  Identities=10%  Similarity=0.058  Sum_probs=57.4

Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC-----cEEEccCccc
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA-----DEVFTESQLE  248 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga-----~~vi~~~~~~  248 (378)
                      |||.-|+....++. .+|||+||+|-+|...+..+...|.+|+++.+...........+ ...+.     -..+..+-.+
T Consensus         2 ~~~~~~~~~~~~~~-~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (348)
T PRK15181          2 TAYEELRTKLVLAP-KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK   80 (348)
T ss_pred             chhhhhhhcccccC-CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence            56777766455444 78999999999999999999988999998876432222222111 11111     1122222223


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCC
Q 017064          249 VKNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      .+.+..+..+   +|+||.+++.
T Consensus        81 ~~~l~~~~~~---~d~ViHlAa~  100 (348)
T PRK15181         81 FTDCQKACKN---VDYVLHQAAL  100 (348)
T ss_pred             HHHHHHHhhC---CCEEEECccc
Confidence            3445555443   9999999873

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.12  E-value=0.029  Score=49.46  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +..+|||+|++|.+|...+..+...|.+|+++++.
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~   39 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRS   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            34689999999999999999998899998887754

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.10  E-value=0.48  Score=45.05  Aligned_cols=93  Identities=19%  Similarity=0.268  Sum_probs=61.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -.+.+|||.|+ |-+|.+++..+...|.+.+.++..  ..+...++++++|+..+      ...++......   +|+||
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNR--T~erA~~La~~~~~~~~------~l~el~~~l~~---~DvVi  243 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANR--TLERAEELAKKLGAEAV------ALEELLEALAE---ADVVI  243 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcC--CHHHHHHHHHHhCCeee------cHHHHHHhhhh---CCEEE
Confidence            35689999999 999999999999899765555532  24444567788995443      12345554543   99999


Q ss_pred             eCCCCccH----HHHHHhcccCCE--EEEEe
Q 017064          267 NCVGGNSA----SKVLKFLSQGGT--MVTYG  291 (378)
Q Consensus       267 d~~g~~~~----~~~~~~l~~~G~--~v~~g  291 (378)
                      .++|.+..    ....+.++..-+  ++.++
T Consensus       244 ssTsa~~~ii~~~~ve~a~~~r~~~livDia  274 (414)
T COG0373         244 SSTSAPHPIITREMVERALKIRKRLLIVDIA  274 (414)
T ss_pred             EecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence            99998653    344455554433  44554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.10  E-value=0.1  Score=47.12  Aligned_cols=84  Identities=15%  Similarity=0.093  Sum_probs=54.3

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-cEEEccCc-ccH----HHHHHHhcCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQ-LEV----KNVKGLLANL  259 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~~vi~~~~-~~~----~~i~~~~~~~  259 (378)
                      --+++.|+|+|+.+++|...+.-+...|.+|++.|-.+.+.++.....++-.. +..+|-.+ +++    +-+++..+..
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            34567899999999999988888888999999999543333333333321111 11233322 222    3466666776


Q ss_pred             CCCcEEEeCCC
Q 017064          260 PEPALGFNCVG  270 (378)
Q Consensus       260 g~~Dvvid~~g  270 (378)
                      | .=-+||++|
T Consensus       106 g-LwglVNNAG  115 (322)
T KOG1610|consen  106 G-LWGLVNNAG  115 (322)
T ss_pred             c-ceeEEeccc
Confidence            6 888999998

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.09  E-value=0.045  Score=50.65  Aligned_cols=79  Identities=20%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHH-HHHhCC---Cc-EEE--ccCcc-cHHH-HHHHhcC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKE-KLKGLG---AD-EVF--TESQL-EVKN-VKGLLAN  258 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~-~~~~~g---a~-~vi--~~~~~-~~~~-i~~~~~~  258 (378)
                      +.+++|+|+++++|...++.+...| ++|+.+.+.    +++.+ ...+++   .. .++  |-.+. .++. +.+....
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   78 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRD----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES   78 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            5689999999999999998888889 899988853    33332 223332   11 122  22221 1222 2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        79 ~~~iD~lI~nAG~   91 (314)
T TIGR01289        79 GRPLDALVCNAAV   91 (314)
T ss_pred             CCCCCEEEECCCc
Confidence            2359999999884

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.08  E-value=0.035  Score=49.41  Aligned_cols=82  Identities=15%  Similarity=0.143  Sum_probs=48.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~D  263 (378)
                      +++||+|++|++|...+..+...|++|+++.+..... .+..+.++..+.. .++..+-.+.+.    +.......+.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999988888899999887542111 1112223333332 222222222222    222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.++|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999874

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.07  E-value=0.049  Score=47.36  Aligned_cols=100  Identities=20%  Similarity=0.215  Sum_probs=61.6

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHH----HhCCCcEE--EccCcccHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEV--FTESQLEVKN  251 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~ga~~v--i~~~~~~~~~  251 (378)
                      +.+...++++++||-.|+  +.|..+..+++..+.  +|+++..    +++..+.+    +++|.+.+  +..+..   .
T Consensus        69 ~~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~----~~~~~~~A~~~~~~~g~~~v~~~~~d~~---~  139 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIER----IPELAEKAERRLRKLGLDNVIVIVGDGT---Q  139 (215)
T ss_pred             HHHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCeEEEECCcc---c
Confidence            334467899999999986  668888888887654  5777663    44444443    45565432  211111   1


Q ss_pred             HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g  291 (378)
                      .  .... +.||+|+-+.... ......+.|++||+++..-
T Consensus       140 ~--~~~~-~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~  177 (215)
T TIGR00080       140 G--WEPL-APYDRIYVTAAGPKIPEALIDQLKEGGILVMPV  177 (215)
T ss_pred             C--Cccc-CCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence            0  0111 2499988654443 3467789999999988654

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK04148 hypothetical protein; Provisional

Probab=96.07  E-value=0.063  Score=42.55  Aligned_cols=81  Identities=17%  Similarity=0.163  Sum_probs=52.4

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      ...+.++++.|. | .|...++.++..|.+|+++.    .++++.+.+++.+.+.+.+.--.  ... ++-.   ++|++
T Consensus        14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaID----i~~~aV~~a~~~~~~~v~dDlf~--p~~-~~y~---~a~li   81 (134)
T PRK04148         14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVID----INEKAVEKAKKLGLNAFVDDLFN--PNL-EIYK---NAKLI   81 (134)
T ss_pred             cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhCCeEEECcCCC--CCH-HHHh---cCCEE
Confidence            345688999999 6 88755555667899999988    57888888888877655432110  001 1111   37788


Q ss_pred             EeCCCCccHHHHH
Q 017064          266 FNCVGGNSASKVL  278 (378)
Q Consensus       266 id~~g~~~~~~~~  278 (378)
                      ..+-..+.++..+
T Consensus        82 ysirpp~el~~~~   94 (134)
T PRK04148         82 YSIRPPRDLQPFI   94 (134)
T ss_pred             EEeCCCHHHHHHH
Confidence            8777666665443

>TIGR02415 23BDH acetoin reductases

Probab=96.05  E-value=0.031  Score=49.64  Aligned_cols=82  Identities=10%  Similarity=0.121  Sum_probs=48.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCCcE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEPAL  264 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~Dv  264 (378)
                      ++++|.|++|++|...++.+...|++|+.+.+.....++....++..+... .+..+-.+.+.    +.+.....+.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            379999999999999998888899999888753111111112233344322 22222222222    2222223335899


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|.++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9999985

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.04  E-value=0.032  Score=49.26  Aligned_cols=83  Identities=17%  Similarity=0.268  Sum_probs=47.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEE-ecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHH----HhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKG----LLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~-~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~----~~~~~g~~  262 (378)
                      ++++||.|++|++|...+..+...|++++++ .+.....++..+.+...+... ++..+-.+.+.+.+    .....+++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999998887889999888 543111111112222223222 22222222222222    22222349


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999999885

>PRK05855 short chain dehydrogenase; Validated

Probab=96.04  E-value=0.028  Score=56.53  Aligned_cols=84  Identities=20%  Similarity=0.218  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .+.++||+||+|++|...++.+...|++|+++.+.....++..+.++..|... ++..+-.+.+.    +.+.....|.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999998888899999988863211111112233444322 22222222222    22222233459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999985

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.04  Score=48.82  Aligned_cols=34  Identities=21%  Similarity=0.193  Sum_probs=29.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++||+|++|++|...++.+...|++|+++.+.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~   35 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR   35 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999999999888888889999988853

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.03  E-value=0.046  Score=48.85  Aligned_cols=82  Identities=15%  Similarity=0.136  Sum_probs=49.9

Q ss_pred             CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCc-EEEccCccc---HHH-HHHHhcCC
Q 017064          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLE---VKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~  259 (378)
                      .+++++|+|+  ++++|...++.+...|++|+++.+..  .++..+ ...+++.. ..+..+-.+   .+. +.+.....
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR--ALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc--chhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999999  79999999988888999998876531  223322 33344432 122222222   222 22222223


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            469999999984

>PLN02240 UDP-glucose 4-epimerase

Probab=96.02  E-value=0.052  Score=50.90  Aligned_cols=82  Identities=17%  Similarity=0.204  Sum_probs=49.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      +++|||+|++|.+|...++.+...|.+|+++.+......+....+..    .+.. ..+..+-.+.+.+.......+ +|
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~-~d   83 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR-FD   83 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC-CC
Confidence            57899999999999999988888899998886532112222222221    1111 222222223344555443333 99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      .||++++.
T Consensus        84 ~vih~a~~   91 (352)
T PLN02240         84 AVIHFAGL   91 (352)
T ss_pred             EEEEcccc
Confidence            99999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.01  E-value=0.039  Score=48.97  Aligned_cols=34  Identities=21%  Similarity=0.201  Sum_probs=30.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.++||+|++|++|...+..+...|++|+++.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~   34 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG   34 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            3589999999999999998888889999998863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.044  Score=47.72  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=49.3

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~i~~~~~~~g~~Dvvid  267 (378)
                      ++++|+|++|++|...++.+...|++|+++.+    +.++.+.++..+...+ .|-.+. .++.+.....+. ++|++|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATAR----DAAALAALQALGAEALALDVADPASVAGLAWKLDGE-ALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC----CHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCC-CCCEEEE
Confidence            47999999999999999888788999998875    3444445555554321 222221 122222222222 4999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            9875

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.044  Score=48.71  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=28.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      .+.+++|+|++|++|...++.+...|++|++..
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~   37 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY   37 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence            357999999999999999998888899987754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.99  E-value=0.051  Score=50.26  Aligned_cols=79  Identities=20%  Similarity=0.337  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CC---cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA---DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga---~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+.+|||+|++|.+|...+..+...|.+|+++++... ...+...+..+ +.   -.++..+-.+...+.+...+   +|
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d   78 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN-DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG---CE   78 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC-chhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC---CC
Confidence            3678999999999999999999889999998886532 11222222221 11   12232222222344444443   99


Q ss_pred             EEEeCCC
Q 017064          264 LGFNCVG  270 (378)
Q Consensus       264 vvid~~g  270 (378)
                      +||.+++
T Consensus        79 ~Vih~A~   85 (322)
T PLN02662         79 GVFHTAS   85 (322)
T ss_pred             EEEEeCC
Confidence            9999886

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.034  Score=49.70  Aligned_cols=35  Identities=17%  Similarity=0.309  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +|+++||+|++|++|...++.+...|++|+++.+.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~   42 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARS   42 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence            47899999999999999999888899999998853

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.99  E-value=0.034  Score=57.08  Aligned_cols=114  Identities=14%  Similarity=0.086  Sum_probs=66.4

Q ss_pred             cccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       143 ~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ...|.-+++...+.+ +..+.+++-.-..+         . ...-.++++||+|++|++|...++.+...|++|+++.+.
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~---------~-~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~  447 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP---------K-EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN  447 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC---------C-CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            455666676666666 55555665332110         0 111247899999999999999999888889999988853


Q ss_pred             CCCcHHHHHHH----H-hCCCc--EEEccCcccHHH----HHHHhcCCCCCcEEEeCCCC
Q 017064          223 RAGSDEAKEKL----K-GLGAD--EVFTESQLEVKN----VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       223 ~~~~~~~~~~~----~-~~ga~--~vi~~~~~~~~~----i~~~~~~~g~~Dvvid~~g~  271 (378)
                          .++.+.+    . ..+..  ..+..+-.+.+.    +.+.....|++|++|+++|.
T Consensus       448 ----~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       448 ----LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             ----HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence                3332222    1 12322  122222222222    22222233459999999984

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.96  E-value=0.11  Score=48.76  Aligned_cols=99  Identities=16%  Similarity=0.234  Sum_probs=68.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH-------------
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG-------------  254 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~-------------  254 (378)
                      ++|.|+|++|++|..++...+..  .++|++++-.. ..+...+++++++..++.-.+......++.             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~-n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGK-NVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            57999999999999999998765  57888887331 233344567789998887655533333332             


Q ss_pred             -----HhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEE
Q 017064          255 -----LLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       255 -----~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~  290 (378)
                           +... ..+|+|+++.++. .+...+.+++.|-++.+.
T Consensus        81 ~~~~~l~~~-~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         81 EGLCELAAL-PEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             hHHHHHhcC-CCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence                 2222 1389999998874 567788888888776654

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.093  Score=44.79  Aligned_cols=64  Identities=16%  Similarity=0.242  Sum_probs=41.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +++|.|+++++|...+..+... .+|+.+.+..    .          ....|-.+  .+.++......+++|++|.++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~----~----------~~~~D~~~--~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS----G----------DVQVDITD--PASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC----C----------ceEecCCC--hHHHHHHHHhcCCCCEEEECCC
Confidence            6899999999999888777666 8888887531    1          11222222  2333333333345999999998


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        65 ~   65 (199)
T PRK07578         65 K   65 (199)
T ss_pred             C
Confidence            4

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.047  Score=47.72  Aligned_cols=74  Identities=16%  Similarity=0.232  Sum_probs=47.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEE-EccCcc-cHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQL-EVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~v-i~~~~~-~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +++|+|+++++|...++.+...|++|+.+.+    +.++.+. .++++...+ .|..+. .++.+.+...+  ++|++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA----RRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH--HLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh--cCcEEEE
Confidence            4899999999999999988888999998875    4444433 344554332 222221 22232222222  3899999


Q ss_pred             CCC
Q 017064          268 CVG  270 (378)
Q Consensus       268 ~~g  270 (378)
                      ++|
T Consensus        76 ~ag   78 (223)
T PRK05884         76 VPA   78 (223)
T ss_pred             CCC
Confidence            876

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.90  E-value=0.081  Score=47.71  Aligned_cols=97  Identities=16%  Similarity=0.207  Sum_probs=70.3

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..++..|....---.|++|+|.|.+..+|.-.+.++...|++|++.-.    .                   .
T Consensus       136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs----~-------------------t  192 (285)
T PRK14189        136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS----K-------------------T  192 (285)
T ss_pred             CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC----C-------------------C
Confidence            3567777777766765332356899999999888899999999999999886431    1                   0


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+.   ..|+||-++|.+.+-.. +++++|-.++.+|..
T Consensus       193 ~---~l~~~~~---~ADIVV~avG~~~~i~~-~~ik~gavVIDVGin  232 (285)
T PRK14189        193 R---DLAAHTR---QADIVVAAVGKRNVLTA-DMVKPGATVIDVGMN  232 (285)
T ss_pred             C---CHHHHhh---hCCEEEEcCCCcCccCH-HHcCCCCEEEEcccc
Confidence            1   1223333   39999999998765222 899999999999844

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.89  E-value=0.13  Score=46.43  Aligned_cols=97  Identities=19%  Similarity=0.240  Sum_probs=69.7

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      +.+||++...+..|....---.|++|+|.|.+..+|.-.+.++...||+|++.- .   ..                   
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s---~t-------------------  191 (285)
T PRK14191        135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-I---LT-------------------  191 (285)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-C---Cc-------------------
Confidence            456777777777776532234699999999977999999999999999987643 1   11                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         ..+...+.   ..|+|+-++|.+.+-. -+++++|..++.+|..
T Consensus       192 ---~~l~~~~~---~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~  231 (285)
T PRK14191        192 ---KDLSFYTQ---NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             ---HHHHHHHH---hCCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence               11222233   2999999999877622 3578999999999943

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.84  E-value=0.093  Score=47.30  Aligned_cols=95  Identities=20%  Similarity=0.185  Sum_probs=70.1

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      ..||++..++..+....---.|++|+|.|.+..+|.-..+++...|++|++.-..   +                     
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~---T---------------------  193 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF---T---------------------  193 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC---C---------------------
Confidence            4677777777777663323458999999998889999999999999998765421   1                     


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                        ..+...+.   ..|++|.++|.+.+-. -+++++|-.++.+|.
T Consensus       194 --~~l~~~~~---~ADIvi~avG~p~~v~-~~~vk~gavVIDvGi  232 (285)
T PRK10792        194 --KNLRHHVR---NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI  232 (285)
T ss_pred             --CCHHHHHh---hCCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence              11333333   3999999999877622 288999999999983

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.83  E-value=0.065  Score=47.19  Aligned_cols=84  Identities=14%  Similarity=0.180  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .+.++||+|++|++|...+..+...|++|+++.+...... +..+.++..+... .+..+-.+.+.+    .+.....++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999888999988775421111 1112223334332 222222222222    222222234


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|.+|.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.83  E-value=0.2  Score=38.58  Aligned_cols=92  Identities=14%  Similarity=0.134  Sum_probs=63.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      |+|.|. |.+|+..++.++..+.+++++.    .++++.+.+++.|.. ++..+..+.+.+++..-.  +++.++-+++.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid----~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~--~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVID----RDPERVEELREEGVE-VIYGDATDPEVLERAGIE--KADAVVILTDD   72 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGG--CESEEEEESSS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEE----CCcHHHHHHHhcccc-cccccchhhhHHhhcCcc--ccCEEEEccCC
Confidence            688999 9999999999999666888887    578888888888844 555665555555554333  48999988887


Q ss_pred             ccHH----HHHHhcccCCEEEEEe
Q 017064          272 NSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       272 ~~~~----~~~~~l~~~G~~v~~g  291 (378)
                      +...    ...+.+.+..+++...
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~~   96 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIARV   96 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEEE
Confidence            6542    3344455666766553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.82  E-value=0.041  Score=48.41  Aligned_cols=32  Identities=16%  Similarity=0.124  Sum_probs=29.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      +++||+|++|++|...++.+...|++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r   32 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG   32 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            47899999999999999999889999998886

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.81  E-value=0.094  Score=44.62  Aligned_cols=101  Identities=18%  Similarity=0.251  Sum_probs=66.8

Q ss_pred             CCCEEEEeCCC-chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcE-EEccCcc-cH----HHHHHHhcCC
Q 017064          188 SGDSIVQNGAT-SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQL-EV----KNVKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~-g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~-vi~~~~~-~~----~~i~~~~~~~  259 (378)
                      ..+.|||+|++ |++|.+.+.-....|+.|+++.|    ..+..+.+. +.|... -+|..++ .+    .++++...| 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR----~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR----RLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc----ccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-
Confidence            45688999875 66999888777788999999996    455555554 666432 2333332 22    345555444 


Q ss_pred             CCCcEEEeCCCCccH-------------------------HH--HHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNSA-------------------------SK--VLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~~-------------------------~~--~~~~l~~~G~~v~~g~~~  294 (378)
                       +.|+.++++|.+..                         .+  ....++..|++|.+|...
T Consensus        81 -kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~  141 (289)
T KOG1209|consen   81 -KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLA  141 (289)
T ss_pred             -ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEeccee
Confidence             79999999985421                         11  234677899999998543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=95.81  E-value=0.046  Score=50.44  Aligned_cols=80  Identities=13%  Similarity=0.118  Sum_probs=46.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+...|.+|+++.+......++.......+--..+..+-.+.+.+.+..... ++|+||+++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEH-KIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhC-CCcEEEECcc
Confidence            489999999999999999888899988765322112222222221111112222222333444443332 4999999998


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        80 ~   80 (328)
T TIGR01179        80 L   80 (328)
T ss_pred             c
Confidence            4

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.81  E-value=0.062  Score=47.66  Aligned_cols=33  Identities=12%  Similarity=0.239  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      +.++||+|++|++|...+..+...|++|+++.+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            578999999999999999988888999987764

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.80  E-value=0.23  Score=44.62  Aligned_cols=154  Identities=15%  Similarity=0.112  Sum_probs=96.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc------------cH-HHH
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL------------EV-KNV  252 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~------------~~-~~i  252 (378)
                      --++..+++.|. |-.|+.++-.++..|+-|..-.    -...+.+..+++|+...-..+.+            +. .+.
T Consensus       161 tv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rd----lrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~  235 (356)
T COG3288         161 TVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARD----LRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQA  235 (356)
T ss_pred             cccchhhhhhhH-HHHHHHHHHHHhhcceEEehhh----hhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHH
Confidence            345578899999 9999999999999999876554    35666666777777654322211            11 112


Q ss_pred             HHHhcCCCCCcEEEeCCC---Cc--c--HHHHHHhcccCCEEEEEecCCCCCccccc--hhhhhcCceEEEEec-hhhhc
Q 017064          253 KGLLANLPEPALGFNCVG---GN--S--ASKVLKFLSQGGTMVTYGGMSKKPITVST--SAFIFKDLSLKGFWL-QKWLS  322 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g---~~--~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~  322 (378)
                      ........++|+||-++-   .+  .  .......|+||..+|.+..-.+.+....-  .....+++++.|... .+...
T Consensus       236 ~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a  315 (356)
T COG3288         236 ELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLA  315 (356)
T ss_pred             HHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhh
Confidence            222222235999998763   22  2  26788999999999999877666655432  334557888888653 22222


Q ss_pred             cccHHHHHHHHHHHHHHHHcCC
Q 017064          323 SEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      .+....+.+.+-.+++++-+.+
T Consensus       316 ~~aS~LYa~Nl~~~l~ll~~~~  337 (356)
T COG3288         316 AQASQLYATNLVNLLKLLCKKK  337 (356)
T ss_pred             hhHHHHHHHHHHHHHHHHhccC
Confidence            2334456666666666655443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.80  E-value=0.041  Score=50.62  Aligned_cols=85  Identities=22%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEE--ccCcccHHHHHHHh----cCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVF--TESQLEVKNVKGLL----ANL  259 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi--~~~~~~~~~i~~~~----~~~  259 (378)
                      ..|.+++|+|+++++|..++.-+..+|++|+.++|+....++..+.++. .....+.  --|-.+.+.+++..    ...
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999999999753222222222222 3333332  11212233333321    222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +..|+.|+++|-
T Consensus       113 ~~ldvLInNAGV  124 (314)
T KOG1208|consen  113 GPLDVLINNAGV  124 (314)
T ss_pred             CCccEEEeCccc
Confidence            358999999983

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.80  E-value=0.069  Score=46.20  Aligned_cols=104  Identities=17%  Similarity=0.150  Sum_probs=66.7

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCc--ccHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQ--LEVKNVK  253 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~--~~~~~i~  253 (378)
                      ..++.....++||=.|  +.+|+.++.+|..+. -..+++++   .++++.+.+    ++.|.+..+.--.  ...+.+.
T Consensus        52 ~~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE---~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~  126 (219)
T COG4122          52 RLLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIE---RDEERAEIARENLAEAGVDDRIELLLGGDALDVLS  126 (219)
T ss_pred             HHHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEe---CCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHH
Confidence            3446667888898888  589999999999886 23344443   356665555    4678776332221  2233444


Q ss_pred             HHhcCCCCCcEEEeCCCC----ccHHHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVGG----NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +.  ..+.||+||--+.-    ..++.+++.|++||-++.=.
T Consensus       127 ~~--~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         127 RL--LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             hc--cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            42  22359999855543    23478999999999987544

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.077  Score=46.85  Aligned_cols=77  Identities=19%  Similarity=0.165  Sum_probs=47.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-CcEEEccCcccHHHHHHHhcCC-CCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKGLLANL-PEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~i~~~~~~~-g~~Dvvid  267 (378)
                      .+++|+|++|++|...+..+...|++|+++.|    ++++.+.+.+.+ ....+..+-.+.+.+.+..... ...|.++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR----NQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            57999999999999888888888999998885    455554444322 1222222222233333332221 12688777


Q ss_pred             CCC
Q 017064          268 CVG  270 (378)
Q Consensus       268 ~~g  270 (378)
                      ++|
T Consensus        78 ~ag   80 (240)
T PRK06101         78 NAG   80 (240)
T ss_pred             cCc
Confidence            776

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.038  Score=48.82  Aligned_cols=33  Identities=24%  Similarity=0.190  Sum_probs=29.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++|+|++|++|...++.+...|++|+++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~   34 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARD   34 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence            579999999999999999988889999999864

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.77  E-value=0.13  Score=49.44  Aligned_cols=76  Identities=11%  Similarity=0.104  Sum_probs=50.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      -.+.+|||.|+ |++|.+++..+...|++.+.++..   +.++ .+++..++...++.     .+++.....   .+|+|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR---t~~ra~~La~~~~~~~~~~-----~~~l~~~l~---~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR---TIEKAQKITSAFRNASAHY-----LSELPQLIK---KADII  246 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHhcCCeEec-----HHHHHHHhc---cCCEE
Confidence            45789999999 999999999999999854444432   3444 34445565222222     123344444   39999


Q ss_pred             EeCCCCccH
Q 017064          266 FNCVGGNSA  274 (378)
Q Consensus       266 id~~g~~~~  274 (378)
                      |+|++.+..
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999998654

>PRK12827 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.086  Score=46.52  Aligned_cols=84  Identities=10%  Similarity=0.106  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~i~~----~~~~  258 (378)
                      .+.+++|+|++|++|...+..+...|++|+++.+....+.++.+.    +...+... ++..+-.+.+.+.+    +...
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999988888899998876432223333322    22334332 22222222222222    1122


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|.+|.++|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999985

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.76  E-value=0.061  Score=50.23  Aligned_cols=79  Identities=16%  Similarity=0.286  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh---CCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG---LGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~---~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .+.+|||+|++|.+|...+..+...|.+|+++++... ...+...+..   .+.-.++..+-.+.+.+.+...+   +|+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~   83 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG---CDL   83 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc---CCE
Confidence            3689999999999999999999888999988876532 1222111111   22122333332233445555443   999


Q ss_pred             EEeCCC
Q 017064          265 GFNCVG  270 (378)
Q Consensus       265 vid~~g  270 (378)
                      ||.+++
T Consensus        84 vih~A~   89 (338)
T PLN00198         84 VFHVAT   89 (338)
T ss_pred             EEEeCC
Confidence            999997

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.76  E-value=0.057  Score=47.80  Aligned_cols=79  Identities=14%  Similarity=0.146  Sum_probs=47.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLANLP  260 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g  260 (378)
                      +++||.|+++++|...++.+...|++++++.+.   .+++.    +.++..+... .+..+-.+.+.    +.++....+
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR---DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            589999999999999998888889998876532   22222    2233334332 22222222222    222222233


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|.++|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06947         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCcc
Confidence            59999999983

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.74  E-value=0.12  Score=46.89  Aligned_cols=95  Identities=17%  Similarity=0.226  Sum_probs=61.7

Q ss_pred             ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc
Q 017064          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE  248 (378)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~  248 (378)
                      .+++.......|....---.|++|+|.|+++-+|...++++...|++|++.-+    ..                     
T Consensus       139 ~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~----~t---------------------  193 (283)
T PRK14192        139 GSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS----RT---------------------  193 (283)
T ss_pred             cCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC----Cc---------------------
Confidence            34444333334444333457899999999555999999999999996654431    10                     


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          249 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                       ..+...+.   .+|++|+++|.+.. --.+.++++-.++.+|..
T Consensus       194 -~~L~~~~~---~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n  233 (283)
T PRK14192        194 -QNLPELVK---QADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             -hhHHHHhc---cCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEe
Confidence             01222222   39999999987553 223678999999999844

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.73  E-value=0.045  Score=49.23  Aligned_cols=32  Identities=19%  Similarity=0.257  Sum_probs=28.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .+++|+|+++++|...++.+...|++|+++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~   33 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH   33 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence            47899999999999999999899999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.71  E-value=0.08  Score=46.65  Aligned_cols=80  Identities=14%  Similarity=0.096  Sum_probs=48.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCc-EEEccCcccHHH----HHHHhcCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GAD-EVFTESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga~-~vi~~~~~~~~~----i~~~~~~~g~  261 (378)
                      +++||+|++|++|...++.+...|++|+++.+..  .+...+....+   +.. .++..+-.+.+.    +.......+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--NDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999988888899999988642  12222222222   221 222222222222    2222222345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|.++|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12824         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.68  E-value=0.14  Score=41.05  Aligned_cols=95  Identities=9%  Similarity=0.099  Sum_probs=66.7

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+|+.+......+....---.|++|+|+|.+..+|.-.+.++...|++|+.+-..   +.                    
T Consensus         7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~---t~--------------------   63 (140)
T cd05212           7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK---TI--------------------   63 (140)
T ss_pred             ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC---Cc--------------------
Confidence            4555555555556553334568999999999999999999999999998876521   10                    


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                         ++.+...   ..|+|+-++|.+.+ ---+++++|-.++.+|.
T Consensus        64 ---~l~~~v~---~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~  101 (140)
T cd05212          64 ---QLQSKVH---DADVVVVGSPKPEK-VPTEWIKPGATVINCSP  101 (140)
T ss_pred             ---CHHHHHh---hCCEEEEecCCCCc-cCHHHcCCCCEEEEcCC
Confidence               1111222   39999999998743 22467999999988873

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.68  E-value=0.039  Score=51.60  Aligned_cols=83  Identities=13%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHh----CCCc-EEEccCcccHHHHHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      ++.+|||+|++|.+|...++.+...|.+|+++.+.... ...+.+.+..    .+.. ..+..+-.+.+.+.+.....+ 
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-   83 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK-   83 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC-
Confidence            46789999999999999999999999999998764211 1112222211    1111 122222223344555444433 


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|+||++++.
T Consensus        84 ~d~Vih~A~~   93 (340)
T PLN02653         84 PDEVYNLAAQ   93 (340)
T ss_pred             CCEEEECCcc
Confidence            8999999874

>PLN02686 cinnamoyl-CoA reductase

Probab=95.67  E-value=0.077  Score=50.27  Aligned_cols=36  Identities=14%  Similarity=0.211  Sum_probs=31.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..+++|||+|++|.+|...+..+...|++|+++++.
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~   86 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT   86 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence            457899999999999999999998899999988753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.66  E-value=0.06  Score=47.50  Aligned_cols=79  Identities=11%  Similarity=0.049  Sum_probs=47.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCcccH---HH-HHHHhcCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLEV---KN-VKGLLANLP  260 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~~---~~-i~~~~~~~g  260 (378)
                      +++||+|++|++|...++.+...|++|+++.+.   ++++.    ..++..+.. .++..+-.+.   +. +.......+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQ---NLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            479999999999999999888889998875432   22222    222334432 2232222222   22 222222234


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|.++|.
T Consensus        79 ~id~vi~~ag~   89 (247)
T PRK09730         79 PLAALVNNAGI   89 (247)
T ss_pred             CCCEEEECCCC
Confidence            59999999985

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.66  E-value=0.059  Score=50.07  Aligned_cols=77  Identities=16%  Similarity=0.091  Sum_probs=47.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHH-HHHhCCC--cEEEccCcccHHHHHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKE-KLKGLGA--DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~-~~~~~ga--~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .|.+|||+|++|.+|...++.+...|  .+|+++.+.    ..+.. ....+..  -.++..+-.+.+.+.+...+   +
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~---i   75 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD----ELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG---V   75 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC----hhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc---C
Confidence            36799999999999999998777665  577776643    22222 2222221  12222232344555555543   9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.++|.
T Consensus        76 D~Vih~Ag~   84 (324)
T TIGR03589        76 DYVVHAAAL   84 (324)
T ss_pred             CEEEECccc
Confidence            999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.05  Score=55.80  Aligned_cols=79  Identities=22%  Similarity=0.307  Sum_probs=49.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLANL  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~  259 (378)
                      +++++|+|++|++|...+..+...|++|+++.+.    +++.+    .++..|... ++..+-.+.+.    +.+.....
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999998888889999999864    33322    223334332 22222222222    22222333


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus       447 g~id~li~~Ag~  458 (657)
T PRK07201        447 GHVDYLVNNAGR  458 (657)
T ss_pred             CCCCEEEECCCC
Confidence            459999999984

>PLN02928 oxidoreductase family protein

Probab=95.65  E-value=0.06  Score=50.46  Aligned_cols=97  Identities=14%  Similarity=0.245  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH--HhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL--KGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~--~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .|++|+|+|. |.+|+..++.++.+|++|++..+..  ..+....+  ..-....+.+... ....+.++...   .|+|
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~ell~~---aDiV  230 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW--TSEPEDGLLIPNGDVDDLVDEKG-GHEDIYEFAGE---ADIV  230 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC--ChhhhhhhccccccccccccccC-cccCHHHHHhh---CCEE
Confidence            4789999999 9999999999999999999876431  11111100  0000000000000 11233444443   7888


Q ss_pred             EeCCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          266 FNCVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       266 id~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +.++....     + ...+..|+++..+|.++
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIA  262 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence            88776321     1 56778888888887776

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.62  E-value=0.085  Score=44.75  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=58.4

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHHHhcCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      .+.++++||-.|+  +.|..+..+++.. +++|+++.    .+++..+.+    +..+.+. +.....+..++.   .. 
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD----~s~~~l~~A~~~~~~~~l~~-i~~~~~d~~~~~---~~-  110 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVD----SLGKKIAFLREVAAELGLKN-VTVVHGRAEEFG---QE-  110 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEe----CcHHHHHHHHHHHHHcCCCC-EEEEeccHhhCC---CC-
Confidence            3556899999987  4566666666644 57887776    355444433    3455543 222222222221   12 


Q ss_pred             CCCcEEEeCCCC---ccHHHHHHhcccCCEEEEEe
Q 017064          260 PEPALGFNCVGG---NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       260 g~~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +.+|+|+.....   ..+..+.+.|++||+++.+-
T Consensus       111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             CCccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            259999965433   23467889999999998874

>PLN02650 dihydroflavonol-4-reductase

Probab=95.62  E-value=0.086  Score=49.52  Aligned_cols=79  Identities=15%  Similarity=0.202  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCC---cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA---DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga---~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      ..++|||+||+|.+|...+..+...|.+|+++++... ..++...+.. .+.   -.++..+-.+.+.+.+...+   +|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~---~d   79 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA-NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG---CT   79 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc-hhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC---CC
Confidence            3568999999999999999999889999999886432 1122211211 121   12222222233345554443   99


Q ss_pred             EEEeCCC
Q 017064          264 LGFNCVG  270 (378)
Q Consensus       264 vvid~~g  270 (378)
                      .||.+++
T Consensus        80 ~ViH~A~   86 (351)
T PLN02650         80 GVFHVAT   86 (351)
T ss_pred             EEEEeCC
Confidence            9999886

>PLN02214 cinnamoyl-CoA reductase

Probab=95.61  E-value=0.088  Score=49.32  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GAD-EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga~-~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+.+|||+|++|.+|...+..+...|.+|+++++...  ..+...+..+   +.. .++..+-.+...+.+...+   +|
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d   83 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPD--DPKNTHLRELEGGKERLILCKADLQDYEALKAAIDG---CD   83 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCch--hhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc---CC
Confidence            5679999999999999999998889999999886421  1111112221   111 2222222233445544443   99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||.+++.
T Consensus        84 ~Vih~A~~   91 (342)
T PLN02214         84 GVFHTASP   91 (342)
T ss_pred             EEEEecCC
Confidence            99999974

>PRK08309 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.29  Score=41.10  Aligned_cols=90  Identities=12%  Similarity=0.055  Sum_probs=47.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCC---cEE--EccCcc-cHHH-HHHHhcCCCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGA---DEV--FTESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga---~~v--i~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      +++|+|++| +|...++.+...|++|++..+    ++++.+.+. .++.   -..  .|..+. .... +.......|++
T Consensus         2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R----~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIAR----REVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             EEEEECcCH-HHHHHHHHHHHCcCEEEEEEC----CHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999975 444456555667999998875    344433332 2321   112  133332 2222 32333333458


Q ss_pred             cEEEeCCCCccHHHHHHhcccCC
Q 017064          263 ALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       263 Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                      |++|+.+=...........+..|
T Consensus        77 d~lv~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         77 DLAVAWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             eEEEEeccccchhhHHHHHHHHc
Confidence            99998876654444444444433

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.60  E-value=0.14  Score=46.73  Aligned_cols=101  Identities=9%  Similarity=-0.009  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhC---CCcEEEc-cCcccHHHHHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGL---GADEVFT-ESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~---ga~~vi~-~~~~~~~~i~~~~~~~g~  261 (378)
                      -.+++++|+|+ |+.|.+++..+...|++ ++++.|.....+...+.++++   +....+. .+-.+.+.+.....   .
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---~  199 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---S  199 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---c
Confidence            35789999999 89999988888888997 666665310002222233333   1111111 11111223333333   3


Q ss_pred             CcEEEeCCCCccH------HH-HHHhcccCCEEEEEe
Q 017064          262 PALGFNCVGGNSA------SK-VLKFLSQGGTMVTYG  291 (378)
Q Consensus       262 ~Dvvid~~g~~~~------~~-~~~~l~~~G~~v~~g  291 (378)
                      .|++|+|+.-...      .. ....+.++..++.+-
T Consensus       200 ~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v  236 (289)
T PRK12548        200 SDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTV  236 (289)
T ss_pred             CCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence            7999999863211      00 134566766666664

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.59  E-value=0.13  Score=49.00  Aligned_cols=91  Identities=24%  Similarity=0.279  Sum_probs=57.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh--CCCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          192 IVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG--LGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~--~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      |+|+|+ |.+|..+++.+...+-  ++++..+    +.++.+.+.+  .+.. ..+..+-.+.+.+.++..+   .|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR----NPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEES----SHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC----CHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEE
Confidence            789999 9999999999887764  6666663    6666655543  2221 2222222344557777765   79999


Q ss_pred             eCCCCccH-HHHHHhcccCCEEEEE
Q 017064          267 NCVGGNSA-SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       267 d~~g~~~~-~~~~~~l~~~G~~v~~  290 (378)
                      +|+|.... .-+-.|+..|-.++..
T Consensus        73 n~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   73 NCAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             E-SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             ECCccchhHHHHHHHHHhCCCeecc
Confidence            99998644 4455778888888873

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.58  E-value=0.057  Score=44.14  Aligned_cols=83  Identities=19%  Similarity=0.250  Sum_probs=59.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHH-HHHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVK-NVKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~-~i~~~~~~~g~  261 (378)
                      .+|-.-||+|+++++|.+++..+...|+.|+...-+   +..-.+.++++|-..++..-+.    ++. .+.+.-..+|.
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp---~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLP---QSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCC---cccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            345667999999999999999999999998877643   3334567889999888865442    221 12223344456


Q ss_pred             CcEEEeCCCCc
Q 017064          262 PALGFNCVGGN  272 (378)
Q Consensus       262 ~Dvvid~~g~~  272 (378)
                      .|+.++|+|..
T Consensus        84 ld~~vncagia   94 (260)
T KOG1199|consen   84 LDALVNCAGIA   94 (260)
T ss_pred             eeeeeecccee
Confidence            99999999964

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.57  E-value=0.048  Score=46.73  Aligned_cols=96  Identities=11%  Similarity=0.104  Sum_probs=57.0

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      ....++.+||-.|+  +.|..+..+|+. |.+|+++.    .+++..+.++    ..+...+ .....+   +....-. 
T Consensus        26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD----~S~~~i~~a~~~~~~~~~~~v-~~~~~d---~~~~~~~-   93 (197)
T PRK11207         26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWD----KNPMSIANLERIKAAENLDNL-HTAVVD---LNNLTFD-   93 (197)
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEe----CCHHHHHHHHHHHHHcCCCcc-eEEecC---hhhCCcC-
Confidence            44566789999997  457788888875 88888886    3555444443    2332211 111111   1111111 


Q ss_pred             CCCcEEEeCCCC---------ccHHHHHHhcccCCEEEEEe
Q 017064          260 PEPALGFNCVGG---------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       260 g~~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +.+|+|+.+..-         ..+....+.|++||.++.+.
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            249999976541         12367788999999976554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.56  E-value=0.048  Score=48.94  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=31.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+.+.+.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~   42 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH   42 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999998899999988753

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.55  E-value=0.14  Score=44.48  Aligned_cols=104  Identities=14%  Similarity=0.135  Sum_probs=65.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC---CcH-------------HHH----HHHHhCCCcEEEccCccc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSD-------------EAK----EKLKGLGADEVFTESQLE  248 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~---~~~-------------~~~----~~~~~~ga~~vi~~~~~~  248 (378)
                      ..+|+|.|. |++|.+++..+...|+.-+.++|-+.   ++-             .|.    ++.+.+....-+...+..
T Consensus        30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            378999999 99999999999999997777765432   111             111    222333333333333222


Q ss_pred             --HHHHHHHhcCCCCCcEEEeCCCCccHH--HHHHhcccCCEEEEEecCCC
Q 017064          249 --VKNVKGLLANLPEPALGFNCVGGNSAS--KVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       249 --~~~i~~~~~~~g~~Dvvid~~g~~~~~--~~~~~l~~~G~~v~~g~~~~  295 (378)
                        .+.+..++..  ++|.||||..+-...  .+..|.+.+=.+|..++..+
T Consensus       109 ~t~en~~~~~~~--~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         109 ITEENLEDLLSK--GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             hCHhHHHHHhcC--CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence              2456666666  499999999875543  33456666667777765543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=95.54  E-value=0.11  Score=48.42  Aligned_cols=80  Identities=9%  Similarity=0.071  Sum_probs=48.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...+..+...|.+|+++.+...........+.+++..  ..+..+-.+.+.+.+.....+ +|+||++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~vvh~   80 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA-IDTVIHF   80 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC-CCEEEEC
Confidence            5899999999999999888888999998764321122222222232211  223223233344555443333 9999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      ++.
T Consensus        81 a~~   83 (338)
T PRK10675         81 AGL   83 (338)
T ss_pred             Ccc
Confidence            874

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.52  E-value=0.1  Score=47.28  Aligned_cols=60  Identities=22%  Similarity=0.392  Sum_probs=52.1

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES  245 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~  245 (378)
                      +.++||+ .+|=+.+|..|.+.+.+|+++|.+++++.... .+.+|++.++.+|+..++...
T Consensus        57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEcCC
Confidence            6799998 56778889999999999999999999988654 689999999999999887554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.52  E-value=0.36  Score=41.45  Aligned_cols=80  Identities=16%  Similarity=0.183  Sum_probs=52.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      -.|.+|+|.|. |.+|..+++.+...|++|+++.    .+.++.+.+. .+|+.. ++..     ++   ...  .+|++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D----~~~~~~~~~~~~~g~~~-v~~~-----~l---~~~--~~Dv~   89 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVAD----INEEAVARAAELFGATV-VAPE-----EI---YSV--DADVF   89 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHcCCEE-Ecch-----hh---ccc--cCCEE
Confidence            35789999999 8999999999999999999654    3556555554 456543 2221     11   111  38888


Q ss_pred             EeCCCCccH-HHHHHhcc
Q 017064          266 FNCVGGNSA-SKVLKFLS  282 (378)
Q Consensus       266 id~~g~~~~-~~~~~~l~  282 (378)
                      +.|+....+ ...+..++
T Consensus        90 vp~A~~~~I~~~~~~~l~  107 (200)
T cd01075          90 APCALGGVINDDTIPQLK  107 (200)
T ss_pred             EecccccccCHHHHHHcC
Confidence            877655443 44555554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.50  E-value=0.25  Score=42.62  Aligned_cols=117  Identities=9%  Similarity=0.043  Sum_probs=70.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|..|||.|+ |.+|.-=+.+....|++|+++...  ..++-..+..+.+ ...+. +..+.+.+    .   .+++||-
T Consensus        11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~--~~~el~~~~~~~~-i~~~~-~~~~~~~~----~---~~~lvia   78 (210)
T COG1648          11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPE--FEPELKALIEEGK-IKWIE-REFDAEDL----D---DAFLVIA   78 (210)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCC--ccHHHHHHHHhcC-cchhh-cccChhhh----c---CceEEEE
Confidence            4689999999 999999999999999999998854  1233333333333 11121 11111111    1   2889999


Q ss_pred             CCCCccHH-HHHHhcccCCEEEEEecCCCCCccccchhhh-hcCceEEEEec
Q 017064          268 CVGGNSAS-KVLKFLSQGGTMVTYGGMSKKPITVSTSAFI-FKDLSLKGFWL  317 (378)
Q Consensus       268 ~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~  317 (378)
                      +++.+..+ ......++.+.+|.+...... .++.....+ ...+.+.-+..
T Consensus        79 At~d~~ln~~i~~~a~~~~i~vNv~D~p~~-~~f~~Pa~~~r~~l~iaIsT~  129 (210)
T COG1648          79 ATDDEELNERIAKAARERRILVNVVDDPEL-CDFIFPAIVDRGPLQIAISTG  129 (210)
T ss_pred             eCCCHHHHHHHHHHHHHhCCceeccCCccc-CceecceeeccCCeEEEEECC
Confidence            99987774 555666777888877643332 233333332 33455544443

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.49  E-value=0.15  Score=46.28  Aligned_cols=96  Identities=21%  Similarity=0.247  Sum_probs=69.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..++..|....---.|++|.|.|.++.+|.-.+.++...|++|++.-+.   +.                   
T Consensus       137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~---t~-------------------  194 (301)
T PRK14194        137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR---ST-------------------  194 (301)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC---CC-------------------
Confidence            45677777777777664334568999999998899999999999999999877432   10                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~  293 (378)
                          .+.+.+.   ..|+||-++|.+.+ ...  ++++|..+|.+|..
T Consensus       195 ----~l~e~~~---~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        195 ----DAKALCR---QADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             ----CHHHHHh---cCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence                1222222   38999999998654 333  38999999999843

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.47  E-value=0.068  Score=50.01  Aligned_cols=81  Identities=14%  Similarity=0.220  Sum_probs=50.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHH-hC----CC-cEEEccCcccHHHHHHHhcCCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLK-GL----GA-DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~-~~----ga-~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      ++|||+||+|.+|...++.+...|.+|+++.+.... ..++...+. ..    +. -.++..+-.+.+.+.+...+.+ +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK-P   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC-C
Confidence            479999999999999999999999999998865211 112222111 11    11 1122222223345555555433 8


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.+++.
T Consensus        80 d~ViH~Aa~   88 (343)
T TIGR01472        80 TEIYNLAAQ   88 (343)
T ss_pred             CEEEECCcc
Confidence            999999974

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.47  E-value=0.071  Score=43.82  Aligned_cols=97  Identities=18%  Similarity=0.294  Sum_probs=59.7

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+|+++...+..|....---.|++|+|.|.+..+|.-...++...|++|+..-..   +                    
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~---T--------------------   70 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK---T--------------------   70 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT---S--------------------
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC---C--------------------
Confidence            45566666666666653334678999999998899999999999999998864311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         ..+.+.+.   ..|+||-++|.+.+- --++++++-.++.+|..
T Consensus        71 ---~~l~~~~~---~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~  110 (160)
T PF02882_consen   71 ---KNLQEITR---RADIVVSAVGKPNLI-KADWIKPGAVVIDVGIN  110 (160)
T ss_dssp             ---SSHHHHHT---TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CE
T ss_pred             ---Ccccceee---eccEEeeeecccccc-ccccccCCcEEEecCCc
Confidence               11223333   399999999987652 13578999999988843

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.087  Score=46.58  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=47.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLANL  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~  259 (378)
                      +.++||+|++|++|...++.+...|++|+.+.+.   .+++.    +.++..+... .+..+-.+.+.    +.......
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR---NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC---CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            4689999999999999988888889998766532   22222    2233344432 22222222222    22222223


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +.+|++|.++|.
T Consensus        79 ~~id~li~~ag~   90 (248)
T PRK06123         79 GRLDALVNNAGI   90 (248)
T ss_pred             CCCCEEEECCCC
Confidence            359999999985

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.41  E-value=0.15  Score=41.55  Aligned_cols=95  Identities=18%  Similarity=0.146  Sum_probs=57.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      ..+.+++|.|+ |.+|...++.+...| .+++++.+    +.++. +..++++... +.....+   ..+...   ++|+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r----~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~---~~Dv   84 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR----TLEKAKALAERFGELG-IAIAYLD---LEELLA---EADL   84 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC----CHHHHHHHHHHHhhcc-cceeecc---hhhccc---cCCE
Confidence            45689999998 999999998888886 45666553    34443 3445555431 0001111   111122   4999


Q ss_pred             EEeCCCCccH-----HHHHHhcccCCEEEEEecC
Q 017064          265 GFNCVGGNSA-----SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       265 vid~~g~~~~-----~~~~~~l~~~G~~v~~g~~  293 (378)
                      ||.|++....     ......++++..++.++..
T Consensus        85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            9999987542     1223456788888877643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.38  E-value=0.14  Score=46.67  Aligned_cols=96  Identities=17%  Similarity=0.202  Sum_probs=68.7

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..++..|....---.|++|+|+|.++.+|.-.+.++...|++|++.-..   +.                   
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r---T~-------------------  193 (296)
T PRK14188        136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR---TR-------------------  193 (296)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC---CC-------------------
Confidence            45677777777767653323569999999988999999999999899998876311   11                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~  293 (378)
                       +   +.+.+.   ..|+||-++|.+.+ ...  ++++|..++.+|..
T Consensus       194 -~---l~e~~~---~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin  232 (296)
T PRK14188        194 -D---LPAVCR---RADILVAAVGRPEMVKGD--WIKPGATVIDVGIN  232 (296)
T ss_pred             -C---HHHHHh---cCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence             0   122222   38999999998664 333  38999999999854

>PLN02427 UDP-apiose/xylose synthase

Probab=95.37  E-value=0.098  Score=49.87  Aligned_cols=76  Identities=12%  Similarity=0.087  Sum_probs=48.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCC------cEEEccCcccHHHHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga------~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      +..+|||+||+|.+|...++.+... |.+|+++.+.    .++...+...+.      -.++..+-.+.+.+.+...+  
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~----~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   86 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY----NDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM--   86 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC----chhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc--
Confidence            3468999999999999999888777 5888888743    333333332221      12222222233455555543  


Q ss_pred             CCcEEEeCCC
Q 017064          261 EPALGFNCVG  270 (378)
Q Consensus       261 ~~Dvvid~~g  270 (378)
                       +|+||.+++
T Consensus        87 -~d~ViHlAa   95 (386)
T PLN02427         87 -ADLTINLAA   95 (386)
T ss_pred             -CCEEEEccc
Confidence             999999997

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=95.33  E-value=0.046  Score=49.70  Aligned_cols=81  Identities=15%  Similarity=0.189  Sum_probs=54.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC--------------------CcHHHHHHHHhCCCcEEEccCcc--
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------------------GSDEAKEKLKGLGADEVFTESQL--  247 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~ga~~vi~~~~~--  247 (378)
                      .+|||.|+ |++|-=|+|.+.+.|+.-++++|-+.                    ......+.++++.-..-++....  
T Consensus        67 s~VLVVGa-GGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~L  145 (427)
T KOG2017|consen   67 SSVLVVGA-GGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEFL  145 (427)
T ss_pred             ccEEEEcc-CCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhhc
Confidence            68999999 99999999999999999898886532                    01112334455554444433332  


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      +.+....+..+   +|+|+||+.+...
T Consensus       146 ~~sNa~~Ii~~---YdvVlDCTDN~~T  169 (427)
T KOG2017|consen  146 SSSNAFDIIKQ---YDVVLDCTDNVPT  169 (427)
T ss_pred             cchhHHHHhhc---cceEEEcCCCccc
Confidence            22445555554   9999999998653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=95.33  E-value=0.095  Score=49.26  Aligned_cols=80  Identities=6%  Similarity=0.125  Sum_probs=47.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|||+|++|.+|...++.+...|.+++++.+... ...+...+...  +.. .++..+-.+.+.+.+...+.+ +|+||
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~D~Vi   79 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQ-PDCVM   79 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-cccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcC-CCEEE
Confidence            37999999999999999999999988776664321 11111111111  111 122222223345555554433 99999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        80 h~A~~   84 (355)
T PRK10217         80 HLAAE   84 (355)
T ss_pred             ECCcc
Confidence            99974

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=95.31  E-value=0.08  Score=48.62  Aligned_cols=78  Identities=13%  Similarity=0.123  Sum_probs=45.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCC---CcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~g---a~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +|+|+|++|.+|...++.+...|  .+|+++.+..  ...+.+.+..+.   -..++..+-.+.+.+.+...+.. +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLT--YAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQ-PDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCC--cchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcC-CCEE
Confidence            48999999999999999777666  6777665321  111112222211   11233223233445555554433 9999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |++++.
T Consensus        78 i~~a~~   83 (317)
T TIGR01181        78 VHFAAE   83 (317)
T ss_pred             EEcccc
Confidence            999984

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.30  E-value=0.17  Score=45.65  Aligned_cols=96  Identities=15%  Similarity=0.190  Sum_probs=70.2

Q ss_pred             hhccccHHHHHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC
Q 017064          167 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES  245 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~  245 (378)
                      ...||++...+..+.. -++ -.|++|+|.|.+..+|.-.+.++...||+|++.-..   +                   
T Consensus       142 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~---T-------------------  198 (287)
T PRK14176        142 GLVPCTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF---T-------------------  198 (287)
T ss_pred             CCCCCcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc---C-------------------
Confidence            4567777777777765 343 479999999998889999999999999998655411   0                   


Q ss_pred             cccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          246 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                          ..+.+.+.   ..|++|.++|.+.+- --+++++|-.++.+|..
T Consensus       199 ----~~l~~~~~---~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin  238 (287)
T PRK14176        199 ----DDLKKYTL---DADILVVATGVKHLI-KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             ----CCHHHHHh---hCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence                01233333   399999999987652 24589999999999953

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.30  E-value=0.14  Score=46.22  Aligned_cols=79  Identities=24%  Similarity=0.292  Sum_probs=57.0

Q ss_pred             CCCCEEEEeCCCchHHHHHH-HHHHHcCCcEEEEecCCCCcHHHHHHHH-----hCCCc---EEEccCccc--HHHHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCII-QIARHRGIHSINIIRDRAGSDEAKEKLK-----GLGAD---EVFTESQLE--VKNVKGL  255 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av-~la~~~g~~vi~~~~~~~~~~~~~~~~~-----~~ga~---~vi~~~~~~--~~~i~~~  255 (378)
                      +-|++.+|.|++.++|.+-+ ++|+ +|.+|+.+.|    +++|++..+     ..++.   .++|....+  -+.+++.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsR----t~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISR----TQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeC----CHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            44789999999999997665 5555 9999999996    677765542     34422   234555444  4678888


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      +.+.. +-+.++|+|.
T Consensus       122 l~~~~-VgILVNNvG~  136 (312)
T KOG1014|consen  122 LAGLD-VGILVNNVGM  136 (312)
T ss_pred             hcCCc-eEEEEecccc
Confidence            88765 8899999995

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.29  E-value=0.057  Score=47.27  Aligned_cols=76  Identities=20%  Similarity=0.266  Sum_probs=49.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      |||+||+|-+|...+..+...|..|+.+.+...  .+.... .......+ ..+-.+.+.+.++..... +|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~-~~~~~~~~-~~dl~~~~~~~~~~~~~~-~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN--SESFEE-KKLNVEFV-IGDLTDKEQLEKLLEKAN-IDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST--GGHHHH-HHTTEEEE-ESETTSHHHHHHHHHHHT-ESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccc--cccccc-ccceEEEE-EeeccccccccccccccC-ceEEEEeecc
Confidence            799999999999999999999999998886532  111111 11222222 122223445555544433 8999999986


Q ss_pred             c
Q 017064          272 N  272 (378)
Q Consensus       272 ~  272 (378)
                      .
T Consensus        76 ~   76 (236)
T PF01370_consen   76 S   76 (236)
T ss_dssp             S
T ss_pred             c
Confidence            3

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.26  E-value=0.079  Score=51.92  Aligned_cols=81  Identities=17%  Similarity=0.182  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-----------------cHHHHHHHHhCCCcEEEccCcccHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQLEVK  250 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ga~~vi~~~~~~~~  250 (378)
                      .+++|+|.|+ |+.|+.++..++..|.+|++..+....                 .....++++++|.+..++..-...-
T Consensus       140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            5789999999 999999999999999998777533110                 0134567788998876654321100


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc
Q 017064          251 NVKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      .+.....   ++|.||.++|..
T Consensus       219 ~~~~~~~---~~D~vilAtGa~  237 (467)
T TIGR01318       219 SLDDLLE---DYDAVFLGVGTY  237 (467)
T ss_pred             CHHHHHh---cCCEEEEEeCCC
Confidence            1122222   399999999974

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.26  E-value=0.15  Score=45.09  Aligned_cols=85  Identities=13%  Similarity=0.187  Sum_probs=52.6

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH----------------HH----HHHHHhCCCcEEEccCcc--
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD----------------EA----KEKLKGLGADEVFTESQL--  247 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~----------------~~----~~~~~~~ga~~vi~~~~~--  247 (378)
                      .+|+|.|+ |++|..+++.+...|..-+.++|.+.-..                .|    .+.++++..+.-+.....  
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            78999999 99999999999999998888776532111                01    123334443322222211  


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVL  278 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~  278 (378)
                      +.+.+.++..+   +|+||||..+......+
T Consensus       104 ~~~~~~~~~~~---~DlVvd~~D~~~~r~~l  131 (240)
T TIGR02355       104 DDAELAALIAE---HDIVVDCTDNVEVRNQL  131 (240)
T ss_pred             CHHHHHHHhhc---CCEEEEcCCCHHHHHHH
Confidence            11234444443   99999999987664433

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.25  E-value=0.057  Score=49.15  Aligned_cols=145  Identities=19%  Similarity=0.309  Sum_probs=76.7

Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHH--HHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~g~~VlV~g~~g~~G~~  204 (378)
                      +++|++.+..+.    |.+|-.-+....+.+.+++.|=..    ....|  +...|.+.  ..+|++||=.|+  |.|.+
T Consensus       108 ~~vg~~~~I~P~----w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~~--~~~g~~vLDvG~--GSGIL  175 (295)
T PF06325_consen  108 IRVGDRLVIVPS----WEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEKY--VKPGKRVLDVGC--GSGIL  175 (295)
T ss_dssp             EEECTTEEEEET----T----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred             EEECCcEEEECC----CcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHHh--ccCCCEEEEeCC--cHHHH
Confidence            556886666543    555533345667778777653322    12233  34444442  678899999886  55666


Q ss_pred             HHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EE-EccCcccHHHHHHHhcCCCCCcEEEeCCCCccH----HHH
Q 017064          205 IIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EV-FTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----SKV  277 (378)
Q Consensus       205 av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~v-i~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~----~~~  277 (378)
                      ++..+| +|++-+..+|.++.. +..++.++..|.. .+ +.......       .  +++|+|+-+.-.+.+    ...
T Consensus       176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~-------~--~~~dlvvANI~~~vL~~l~~~~  245 (295)
T PF06325_consen  176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV-------E--GKFDLVVANILADVLLELAPDI  245 (295)
T ss_dssp             HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC-------C--S-EEEEEEES-HHHHHHHHHHC
T ss_pred             HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc-------c--ccCCEEEECCCHHHHHHHHHHH
Confidence            665555 588655555543211 1122233333432 22 21111110       1  259999988776554    455


Q ss_pred             HHhcccCCEEEEEecC
Q 017064          278 LKFLSQGGTMVTYGGM  293 (378)
Q Consensus       278 ~~~l~~~G~~v~~g~~  293 (378)
                      .++++++|.+++.|-.
T Consensus       246 ~~~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  246 ASLLKPGGYLILSGIL  261 (295)
T ss_dssp             HHHEEEEEEEEEEEEE
T ss_pred             HHhhCCCCEEEEcccc
Confidence            6889999999998844

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK08328 hypothetical protein; Provisional

Probab=95.25  E-value=0.22  Score=43.75  Aligned_cols=97  Identities=14%  Similarity=0.160  Sum_probs=57.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-----------------HHH----HHHHhCCCcEEEccCcc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-----------------EAK----EKLKGLGADEVFTESQL  247 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-----------------~~~----~~~~~~ga~~vi~~~~~  247 (378)
                      +.+|+|.|+ |++|..++..+...|..-+.++|.+.-..                 .|.    +.++++..+..++....
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~  105 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG  105 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence            378999999 99999999999999998777776432010                 111    12334443333322211


Q ss_pred             --cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH--hcccCCEEEE
Q 017064          248 --EVKNVKGLLANLPEPALGFNCVGGNSASKVLK--FLSQGGTMVT  289 (378)
Q Consensus       248 --~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~--~l~~~G~~v~  289 (378)
                        ..+.+.++..+   +|+||||+.+......+.  +.+.+=-++.
T Consensus       106 ~~~~~~~~~~l~~---~D~Vid~~d~~~~r~~l~~~~~~~~ip~i~  148 (231)
T PRK08328        106 RLSEENIDEVLKG---VDVIVDCLDNFETRYLLDDYAHKKGIPLVH  148 (231)
T ss_pred             cCCHHHHHHHHhc---CCEEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence              12334444443   999999999865544444  4444433443

>PLN02583 cinnamoyl-CoA reductase

Probab=95.22  E-value=0.19  Score=46.07  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CC-cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GA-DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga-~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      ++.+|||+|++|.+|...++.+...|.+|++++|... ..+..+.+..+   +. -.++..+-.+.+.+.....+   .|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~---~d   80 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNG-ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKG---CS   80 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCch-hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcC---CC
Confidence            4678999999999999999999999999999886421 11222223332   11 12232232333445554443   88


Q ss_pred             EEEeCCC
Q 017064          264 LGFNCVG  270 (378)
Q Consensus       264 vvid~~g  270 (378)
                      .|+.+.+
T Consensus        81 ~v~~~~~   87 (297)
T PLN02583         81 GLFCCFD   87 (297)
T ss_pred             EEEEeCc
Confidence            8886554

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.22  E-value=0.22  Score=42.06  Aligned_cols=114  Identities=12%  Similarity=0.206  Sum_probs=74.9

Q ss_pred             hhccccHHHHHHHHHHHhcc----------CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC
Q 017064          167 ATIIVNPLTALRMLEDFTTL----------NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL  236 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~----------~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~  236 (378)
                      ..+||++..++..|.. .++          -.|++|+|.|.+..+|.=...++...||+|++.-..  +.-    .....
T Consensus        31 ~~~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~--~~~----~~~~~  103 (197)
T cd01079          31 SILPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN--GIQ----VFTRG  103 (197)
T ss_pred             CccCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC--ccc----ccccc
Confidence            4567777777777765 333          568999999999999999999999999999865211  000    00000


Q ss_pred             CCcEEEccCc---ccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          237 GADEVFTESQ---LEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       237 ga~~vi~~~~---~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +-   +....   .+. ..+.+.+..   .|+||-++|.+.+.---+++++|-.+|.+|..
T Consensus       104 ~~---~~hs~t~~~~~~~~l~~~~~~---ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         104 ES---IRHEKHHVTDEEAMTLDCLSQ---SDVVITGVPSPNYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             cc---cccccccccchhhHHHHHhhh---CCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence            10   01111   111 124444443   99999999998763346889999999999843

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN03139 formate dehydrogenase; Provisional

Probab=95.21  E-value=0.095  Score=49.65  Aligned_cols=88  Identities=15%  Similarity=0.124  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|+|. |.+|+..++.++.+|++|++..+.    ....+...+.|+...        ..+.++...   .|+|+.
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~----~~~~~~~~~~g~~~~--------~~l~ell~~---sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRL----KMDPELEKETGAKFE--------EDLDAMLPK---CDVVVI  261 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCC----CcchhhHhhcCceec--------CCHHHHHhh---CCEEEE
Confidence            4789999998 999999999999999999876532    111122233443221        112233322   677766


Q ss_pred             CCCCcc-H-----HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-A-----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-~-----~~~~~~l~~~G~~v~~g  291 (378)
                      ++.... .     ...+..|+++..+|.++
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence            665321 1     34566677766666665

>PRK07574 formate dehydrogenase; Provisional

Probab=95.20  E-value=0.11  Score=49.12  Aligned_cols=88  Identities=16%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|+|. |.+|+..++.++.+|++|++..+..    ...+....+|+...        ..+.++...   .|+|+.
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~----~~~~~~~~~g~~~~--------~~l~ell~~---aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR----LPEEVEQELGLTYH--------VSFDSLVSV---CDVVTI  254 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC----CchhhHhhcCceec--------CCHHHHhhc---CCEEEE
Confidence            4679999999 9999999999999999999887532    11122223443211        112223322   677776


Q ss_pred             CCCCcc-H-----HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-A-----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-~-----~~~~~~l~~~G~~v~~g  291 (378)
                      +..... .     ...+..|+++..+|.++
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence            665321 1     34566677776666655

>PLN03075 nicotianamine synthase; Provisional

Probab=95.18  E-value=0.11  Score=47.08  Aligned_cols=106  Identities=13%  Similarity=0.094  Sum_probs=63.8

Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC-----CCcEEEccCcccH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-----GADEVFTESQLEV  249 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-----ga~~vi~~~~~~~  249 (378)
                      +..+...... ++++|+-.|+ |+.|+.++.+++.+.  .+++.+.    .+++..+.+++.     |...-+.....+.
T Consensus       113 ~~~L~~~~~~-~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD----~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da  186 (296)
T PLN03075        113 FDLLSQHVNG-VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFD----IDPSANDVARRLVSSDPDLSKRMFFHTADV  186 (296)
T ss_pred             HHHHHHhhcC-CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHhhhccCccCCcEEEECch
Confidence            3344443333 7799999998 999999998887553  4566665    466666666542     2222122222222


Q ss_pred             HHHHHHhcCCCCCcEEEeCCC------C--ccHHHHHHhcccCCEEEEEe
Q 017064          250 KNVKGLLANLPEPALGFNCVG------G--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g------~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+   .....++||+||-.+-      .  ..+....+.|++||.++.-.
T Consensus       187 ~~---~~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        187 MD---VTESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             hh---cccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            22   2222235999998752      1  22478889999999987654

>PLN00016 RNA-binding protein; Provisional

Probab=95.16  E-value=0.17  Score=48.16  Aligned_cols=99  Identities=12%  Similarity=0.171  Sum_probs=61.5

Q ss_pred             CCEEEEe----CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH--------HHHHHhCCCcEEEccCcccHHHHHHHh
Q 017064          189 GDSIVQN----GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------KEKLKGLGADEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       189 g~~VlV~----g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~--------~~~~~~~ga~~vi~~~~~~~~~i~~~~  256 (378)
                      ..+|||+    |++|.+|...+..+...|.+|++++|.... ..+        ...+...|...+. .+   ..++.+..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~v~~v~-~D---~~d~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVW-GD---PADVKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc-hhhhccCchhhhhHhhhcCceEEE-ec---HHHHHhhh
Confidence            3689999    999999999999888889999999975321 111        1112233444332 12   12233333


Q ss_pred             cCCCCCcEEEeCCCCcc--HHHHHHhcccC--CEEEEEecC
Q 017064          257 ANLPEPALGFNCVGGNS--ASKVLKFLSQG--GTMVTYGGM  293 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~--~~~~~~~l~~~--G~~v~~g~~  293 (378)
                      ...+ +|+||++.+...  ....++.++..  .++|+++..
T Consensus       127 ~~~~-~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        127 AGAG-FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             ccCC-ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            3333 999999987643  34556655533  378887743

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.16  E-value=0.23  Score=45.00  Aligned_cols=93  Identities=23%  Similarity=0.172  Sum_probs=57.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      ..+.+++|+|+ |++|.+++..++..| .+|+++.|    +.++.+.+ ..++....+.. ..   .......   .+|+
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R----~~~~a~~l~~~~~~~~~~~~-~~---~~~~~~~---~~Di  188 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNR----TVERAEELAKLFGALGKAEL-DL---ELQEELA---DFDL  188 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhhhccceee-cc---cchhccc---cCCE
Confidence            45678999998 999999999999999 57777764    44444333 34432110111 00   1111112   4999


Q ss_pred             EEeCCCCccH------HHHHHhcccCCEEEEEe
Q 017064          265 GFNCVGGNSA------SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       265 vid~~g~~~~------~~~~~~l~~~G~~v~~g  291 (378)
                      ||+|+.....      ......++++..++.+-
T Consensus       189 vInaTp~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        189 IINATSAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             EEECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            9999975432      12346777777777775

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.17  Score=45.12  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=29.2

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|+++  ++|...+..+...|++|+++.+.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            357899999984  89999888887889999988754

>PRK07069 short chain dehydrogenase; Validated

Probab=95.15  E-value=0.074  Score=47.08  Aligned_cols=31  Identities=16%  Similarity=0.169  Sum_probs=27.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++|+|++|++|...++.+...|++|+++.+.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~   32 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN   32 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            7999999999999998888889999988864

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.15  E-value=0.26  Score=44.45  Aligned_cols=97  Identities=19%  Similarity=0.264  Sum_probs=70.4

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-..   +                    
T Consensus       136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~---t--------------------  192 (284)
T PRK14190        136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK---T--------------------  192 (284)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC---c--------------------
Confidence            35677777777777653323578999999999999999999999999998864310   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         ..+.+.+.   ..|+||-++|.+.+ ---+++++|..++.+|..
T Consensus       193 ---~~l~~~~~---~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~  232 (284)
T PRK14190        193 ---KNLAELTK---QADILIVAVGKPKL-ITADMVKEGAVVIDVGVN  232 (284)
T ss_pred             ---hhHHHHHH---hCCEEEEecCCCCc-CCHHHcCCCCEEEEeecc
Confidence               11223333   39999999998775 224678999999999844

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.13  E-value=0.098  Score=45.84  Aligned_cols=80  Identities=21%  Similarity=0.227  Sum_probs=47.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCcccHHHHHHH----hcCCCCCcEE
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLEVKNVKGL----LANLPEPALG  265 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~----~~~~g~~Dvv  265 (378)
                      +||+|++|++|...++.+...|++|+++.+..... .+..+.+++.|... .+..+-.+...+.+.    ....+++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999998888899998887642111 11122334445432 222222222222221    1222359999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |.++|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            999985

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.2  Score=45.02  Aligned_cols=96  Identities=15%  Similarity=0.229  Sum_probs=70.1

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..++..|....---.|++|+|.|.+..+|.=...++...||+|++.-     +                  +..
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~ch-----s------------------~T~  193 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICH-----S------------------KTK  193 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC-----C------------------CCC
Confidence            56777777777776633335689999999999999999999999999886543     1                  011


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         .+...+..   .|++|-++|.+.+ ---+++++|-.+|.+|-.
T Consensus       194 ---~l~~~~~~---ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin  232 (278)
T PRK14172        194 ---NLKEVCKK---ADILVVAIGRPKF-IDEEYVKEGAIVIDVGTS  232 (278)
T ss_pred             ---CHHHHHhh---CCEEEEcCCCcCc-cCHHHcCCCcEEEEeecc
Confidence               12333332   9999999998776 224679999999999843

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.2  Score=45.19  Aligned_cols=97  Identities=13%  Similarity=0.217  Sum_probs=71.0

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..++..|....---.|++|+|.|.+..+|.=...++...||+|++.-.                       +.
T Consensus       137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs-----------------------~T  193 (284)
T PRK14177        137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHS-----------------------KT  193 (284)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-----------------------CC
Confidence            3567777767766665433457899999999999999999999999998875431                       11


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+.   ..|++|-++|.+.+- --+++++|-.++.+|..
T Consensus       194 ~---~l~~~~~---~ADIvIsAvGk~~~i-~~~~ik~gavVIDvGin  233 (284)
T PRK14177        194 Q---NLPSIVR---QADIIVGAVGKPEFI-KADWISEGAVLLDAGYN  233 (284)
T ss_pred             C---CHHHHHh---hCCEEEEeCCCcCcc-CHHHcCCCCEEEEecCc
Confidence            1   1233333   399999999987762 25789999999999953

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.08  E-value=0.11  Score=47.36  Aligned_cols=60  Identities=23%  Similarity=0.324  Sum_probs=52.8

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      .+.+.||.++||-.-+|..|...+.++..+|+++|++.... -+.||+..++.+|+.-+..
T Consensus        97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~-ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEK-MSKEKRILLRALGAEIILT  156 (362)
T ss_pred             cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechh-hhHHHHHHHHHcCCEEEec
Confidence            36799999999999999999999999999999999988443 5778999999999987763

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.06  E-value=0.19  Score=43.25  Aligned_cols=33  Identities=21%  Similarity=0.271  Sum_probs=28.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.+|+|.|+ |++|...++.+...|..-+.++|.
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~   53 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDD   53 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecC
Confidence            378999999 999999999999999976666655

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02476 O-methyltransferase

Probab=95.05  E-value=0.18  Score=45.44  Aligned_cols=105  Identities=11%  Similarity=0.104  Sum_probs=65.3

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccH-HHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV-KNV  252 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~-~~i  252 (378)
                      +..+.+....++||=.|.  ..|..++.+|+.++  .+++.+.    .+++..+.+    +..|..+-+.....+. +.+
T Consensus       110 L~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE----~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L  183 (278)
T PLN02476        110 LAMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACE----RDSNSLEVAKRYYELAGVSHKVNVKHGLAAESL  183 (278)
T ss_pred             HHHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence            444566777899999984  88999999998774  4555555    355555444    4577653333222222 223


Q ss_pred             HHHhc--CCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064          253 KGLLA--NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       253 ~~~~~--~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~  290 (378)
                      .++..  ..+.||.||--+...    .+..+++.+++||.++.=
T Consensus       184 ~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        184 KSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             HHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            33321  113599998655542    347789999999998753

>PRK14967 putative methyltransferase; Provisional

Probab=95.05  E-value=0.34  Score=42.33  Aligned_cols=95  Identities=13%  Similarity=0.076  Sum_probs=57.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      ..+.++++||-.|+ |. |..+..+++. ++ +++++.    .+++..+.++    ..+....+...  +...   ....
T Consensus        32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD----~s~~~l~~a~~n~~~~~~~~~~~~~--d~~~---~~~~   99 (223)
T PRK14967         32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVD----ISRRAVRSARLNALLAGVDVDVRRG--DWAR---AVEF   99 (223)
T ss_pred             cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEE----CCHHHHHHHHHHHHHhCCeeEEEEC--chhh---hccC
Confidence            45788999999998 54 8888888875 55 666665    3555554443    34443222111  1111   1122


Q ss_pred             CCCCcEEEeCCCCc----------------------------cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGGN----------------------------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~~----------------------------~~~~~~~~l~~~G~~v~~g  291 (378)
                       +.||+|+.+..-.                            .+..+.+.|++||+++.+.
T Consensus       100 -~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        100 -RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             -CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence             2499999763210                            1246788999999998764

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.21  Score=44.94  Aligned_cols=97  Identities=16%  Similarity=0.217  Sum_probs=71.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      +.+||++...+..|....---.|++|+|.|.+..+|.=.+.++...||+|++.-..   +                    
T Consensus       136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~---T--------------------  192 (282)
T PRK14180        136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---T--------------------  192 (282)
T ss_pred             CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC---C--------------------
Confidence            45677777777777664434569999999999999999999999999998654311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+.   ..|++|-++|.+.+-. -+++++|-.++.+|..
T Consensus       193 ~---dl~~~~k---~ADIvIsAvGkp~~i~-~~~vk~gavVIDvGin  232 (282)
T PRK14180        193 T---DLKSHTT---KADILIVAVGKPNFIT-ADMVKEGAVVIDVGIN  232 (282)
T ss_pred             C---CHHHHhh---hcCEEEEccCCcCcCC-HHHcCCCcEEEEeccc
Confidence            0   1222233   3999999999877622 3789999999999843

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.00  E-value=0.12  Score=48.22  Aligned_cols=33  Identities=24%  Similarity=0.318  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .|++|.|.|. |.+|...++.++.+|++|++..+
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~  181 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSR  181 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC
Confidence            4789999999 99999999999999999987764

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.00  E-value=0.32  Score=41.54  Aligned_cols=101  Identities=19%  Similarity=0.187  Sum_probs=58.0

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH----hCCCcE--EEccCcccHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNV  252 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~ga~~--vi~~~~~~~~~i  252 (378)
                      +.....+.++++||=.|+  +.|..++.+++.. +.+|+++.    .+++..+.++    .++.+.  ++..+..  +.+
T Consensus        32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD----~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~  103 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIE----RDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECL  103 (196)
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCCeEEEECchH--HHH
Confidence            344467788898887775  5566777777654 56777776    3555555443    355443  2222211  112


Q ss_pred             HHHhcCCCCCcEEEeCCCC---ccHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGG---NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+..   .+|.++-..+.   ..++.+.+.|++||+++...
T Consensus       104 ~~~~~---~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        104 AQLAP---APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             hhCCC---CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            12211   24554433332   23478889999999998775

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.98  E-value=0.1  Score=44.96  Aligned_cols=106  Identities=18%  Similarity=0.261  Sum_probs=65.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-CcEEE--ccCccc---H-HHHHHHhcCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADEVF--TESQLE---V-KNVKGLLANLPE  261 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~~vi--~~~~~~---~-~~i~~~~~~~g~  261 (378)
                      |++++++|+.|++|+.....+...|+++.++.+..+ +.+....++... ...++  -++-..   . +..++.....|.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            899999999999999999888899999999885432 233333333322 22221  222111   1 223444444456


Q ss_pred             CcEEEeCCCCcc---H---------------HHHHHhc-----ccCCEEEEEecCCC
Q 017064          262 PALGFNCVGGNS---A---------------SKVLKFL-----SQGGTMVTYGGMSK  295 (378)
Q Consensus       262 ~Dvvid~~g~~~---~---------------~~~~~~l-----~~~G~~v~~g~~~~  295 (378)
                      .|+.|+.+|-..   .               ..++..+     .+||-+|.+++..+
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            999999998421   1               2233333     37899999986554

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.96  E-value=0.22  Score=43.23  Aligned_cols=99  Identities=14%  Similarity=0.082  Sum_probs=60.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE---------ccCc-c-cHHHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---------TESQ-L-EVKNVKG  254 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi---------~~~~-~-~~~~i~~  254 (378)
                      .++.+||+.|+  |.|.-++.+|. .|.+|+++.    .++...+.+ .+.|.....         ...+ . ...++..
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD----~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  105 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVE----LSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA  105 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEe----CCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC
Confidence            57789999997  77888888885 699999988    467666654 233322110         0000 0 0111211


Q ss_pred             Hhc-CCCCCcEEEeCCCC---------ccHHHHHHhcccCCEEEEEec
Q 017064          255 LLA-NLPEPALGFNCVGG---------NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~-~~g~~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      +.. ..+.+|.|+|+..-         ..++...++|+|||++++.+.
T Consensus       106 ~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       106 LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            111 01249999997652         123678899999999777763

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.94  E-value=0.24  Score=44.59  Aligned_cols=97  Identities=16%  Similarity=0.213  Sum_probs=70.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-..   +                    
T Consensus       134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~---T--------------------  190 (282)
T PRK14169        134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK---T--------------------  190 (282)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC---C--------------------
Confidence            35677777777667653333578999999999999999999999999988755311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+.   ..|+||-++|.+.+ ---+++++|-.++.+|..
T Consensus       191 ~---~l~~~~~---~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin  230 (282)
T PRK14169        191 R---NLKQLTK---EADILVVAVGVPHF-IGADAVKPGAVVIDVGIS  230 (282)
T ss_pred             C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCcEEEEeecc
Confidence            0   1223333   29999999998776 224689999999999944

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.92  E-value=0.08  Score=47.22  Aligned_cols=74  Identities=16%  Similarity=0.149  Sum_probs=51.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||.||+|- |...+..+...|.+|+++++    ++...+.+...|...+... ..+.+.+.++....+ +|+|||++.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~----t~~~~~~~~~~g~~~v~~g-~l~~~~l~~~l~~~~-i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVT----TSEGKHLYPIHQALTVHTG-ALDPQELREFLKRHS-IDILVDATH   74 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEc----cCCccccccccCCceEEEC-CCCHHHHHHHHHhcC-CCEEEEcCC
Confidence            6999999665 99888777778999999985    4444445555665555422 233345666665544 999999887


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        75 P   75 (256)
T TIGR00715        75 P   75 (256)
T ss_pred             H
Confidence            5

This enzyme was found to be a monomer by gel filtration.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.91  E-value=0.32  Score=44.58  Aligned_cols=33  Identities=15%  Similarity=0.065  Sum_probs=29.8

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEe
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~  220 (378)
                      .|+++||+|++  .++|.+.+..+...|++|++..
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~   41 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT   41 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence            57899999995  7999999999999999999854

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.91  E-value=0.83  Score=39.77  Aligned_cols=116  Identities=6%  Similarity=-0.107  Sum_probs=67.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|||.|| |.++.-=+..+...|++|+++...  -+++-.++. ..|.-..+ ........+    .   ++++||-
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~--i~~el~~l~-~~~~i~~~-~r~~~~~dl----~---g~~LVia   91 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKK--FSKEFLDLK-KYGNLKLI-KGNYDKEFI----K---DKHLIVI   91 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC--CCHHHHHHH-hCCCEEEE-eCCCChHHh----C---CCcEEEE
Confidence            4679999999 999988888888899999888743  233333332 23332222 112111222    2   3999999


Q ss_pred             CCCCccHHHHHHhcc-cCCEEEEEecCCCCCccccchhhhhc-CceEEEEe
Q 017064          268 CVGGNSASKVLKFLS-QGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFW  316 (378)
Q Consensus       268 ~~g~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~  316 (378)
                      |++.+..+..+...+ ..+.++.....+. ..++-.+.++.+ ++++.-+.
T Consensus        92 ATdD~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~IaIST  141 (223)
T PRK05562         92 ATDDEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFALNT  141 (223)
T ss_pred             CCCCHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEEEEC
Confidence            999888865554444 4466666653322 233333334433 45554443

>TIGR00438 rrmJ cell division protein FtsJ

Probab=94.91  E-value=0.15  Score=43.25  Aligned_cols=98  Identities=14%  Similarity=0.104  Sum_probs=54.9

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHc-C-CcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCccc-HHHHHHHhcC
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR-G-IHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLE-VKNVKGLLAN  258 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~-~~~i~~~~~~  258 (378)
                      ...+++|++||..|+ |.-+. +..+++.. + .+++++..    ++++    ...+...+. +..+.. .+.+.+.+++
T Consensus        27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDi----s~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~   96 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDL----QPMK----PIENVDFIRGDFTDEEVLNKIRERVGD   96 (188)
T ss_pred             hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEec----cccc----cCCCceEEEeeCCChhHHHHHHHHhCC
Confidence            345789999999998 44444 44455443 3 46666652    3322    112333221 222211 2344444544


Q ss_pred             CCCCcEEEeCC-----CC-------------ccHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCV-----GG-------------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~-----g~-------------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      . ++|+|+...     |.             ..+..+.++|++||+++...
T Consensus        97 ~-~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        97 D-KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             C-CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            3 499999532     21             12356789999999998754

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.89  E-value=0.34  Score=43.58  Aligned_cols=97  Identities=14%  Similarity=0.170  Sum_probs=69.9

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+|+++...+..|....---.|.+|+|.|.+..+|.-...++...|++|++.-.    ..                   
T Consensus       130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs----~t-------------------  186 (279)
T PRK14178        130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS----KT-------------------  186 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec----Ch-------------------
Confidence            3567777777777766333356899999999889999999999999999887652    11                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         ..+.+.+.   ..|++|.++|.+.+ ---+++++|..++.+|..
T Consensus       187 ---~~L~~~~~---~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~  226 (279)
T PRK14178        187 ---ENLKAELR---QADILVSAAGKAGF-ITPDMVKPGATVIDVGIN  226 (279)
T ss_pred             ---hHHHHHHh---hCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence               12233333   39999999996644 112457999999999944

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.26  Score=44.45  Aligned_cols=95  Identities=17%  Similarity=0.296  Sum_probs=68.5

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..+...|....---.|++|.|.|.++.+|.-.+.++...|++|++.- ..  ++                    
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~-s~--t~--------------------  193 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH-SR--TR--------------------  193 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC-CC--CC--------------------
Confidence            56777777776676533335789999999999999999999999999987652 11  10                    


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~  293 (378)
                      +   +.+.+.   ..|+||-++|.+.+ ..  .++++|-.+|.+|..
T Consensus       194 ~---l~~~~~---~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin  232 (284)
T PRK14179        194 N---LAEVAR---KADILVVAIGRGHFVTK--EFVKEGAVVIDVGMN  232 (284)
T ss_pred             C---HHHHHh---hCCEEEEecCccccCCH--HHccCCcEEEEecce
Confidence            1   222222   39999999998765 33  349999999999844

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.86  E-value=0.14  Score=44.82  Aligned_cols=35  Identities=14%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+++++|+|+++++|...+..+...|++|+++.+.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~   38 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ   38 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            45799999999999999998888889999888753

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.85  E-value=0.26  Score=43.18  Aligned_cols=85  Identities=18%  Similarity=0.209  Sum_probs=61.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .++|.|+ |.+|...++.+...|..|+++.    .++++.+. +.+--..+++..+..+...+++.--.  .+|+++-++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id----~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t   74 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLID----RDEERVEEFLADELDTHVVIGDATDEDVLEEAGID--DADAVVAAT   74 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEE----cCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCC--cCCEEEEee
Confidence            5889999 9999999999999999999998    46777665 33233445565666665566665222  599999999


Q ss_pred             CCccHHHHHHhcc
Q 017064          270 GGNSASKVLKFLS  282 (378)
Q Consensus       270 g~~~~~~~~~~l~  282 (378)
                      |.+..+..+-.++
T Consensus        75 ~~d~~N~i~~~la   87 (225)
T COG0569          75 GNDEVNSVLALLA   87 (225)
T ss_pred             CCCHHHHHHHHHH
Confidence            9987655444333

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=94.83  E-value=0.68  Score=41.15  Aligned_cols=34  Identities=15%  Similarity=0.199  Sum_probs=31.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      -+|.+|+|.|- |.+|+.+++++...|++|++++|
T Consensus        36 l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD   69 (254)
T cd05313          36 LKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSD   69 (254)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence            35789999999 99999999999999999999886

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.13  Score=45.07  Aligned_cols=73  Identities=21%  Similarity=0.242  Sum_probs=47.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE--ccCcc-cHHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      .++++||.|++|++|...++.+...|++|+++.+...    +     .... .++  |..+. ...+ +.+.....+ +|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~----~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~-~d   70 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI----D-----DFPG-ELFACDLADIEQTAATLAQINEIHP-VD   70 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc----c-----ccCc-eEEEeeCCCHHHHHHHHHHHHHhCC-Cc
Confidence            3578999999999999999998889999999886421    1     1111 222  22221 1222 333333333 89


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|.++|.
T Consensus        71 ~vi~~ag~   78 (234)
T PRK07577         71 AIVNNVGI   78 (234)
T ss_pred             EEEECCCC
Confidence            99999985

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.81  E-value=0.21  Score=43.92  Aligned_cols=104  Identities=13%  Similarity=0.145  Sum_probs=66.0

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~  255 (378)
                      .....+.+|++||=++  +|.|..|..+++..| ++|+++.    -++.-++.++    +.|... +..-..+++.+-  
T Consensus        44 i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D----~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP--  114 (238)
T COG2226          44 ISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLD----ISESMLEVAREKLKKKGVQN-VEFVVGDAENLP--  114 (238)
T ss_pred             HHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEE----CCHHHHHHHHHHhhccCccc-eEEEEechhhCC--
Confidence            3345566899988876  488999999999887 4666665    3555555443    344332 211122222221  


Q ss_pred             hcCCCCCcEEEeCCCCc-------cHHHHHHhcccCCEEEEEecCC
Q 017064          256 LANLPEPALGFNCVGGN-------SASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ..+. .||+|..+.|-.       .+.+..+.|+|||+++.+....
T Consensus       115 f~D~-sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         115 FPDN-SFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             CCCC-ccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            2222 499999888832       2367889999999999988543

>PLN02244 tocopherol O-methyltransferase

Probab=94.79  E-value=0.085  Score=49.39  Aligned_cols=96  Identities=16%  Similarity=0.192  Sum_probs=59.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .++++||=.|+  +.|..+..+++..|++|+++.    .++...+.++    ..|...-+.....+...+ .. .. +.|
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD----~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~-~~-~~-~~F  187 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGIT----LSPVQAARANALAAAQGLSDKVSFQVADALNQ-PF-ED-GQF  187 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEcCcccC-CC-CC-CCc
Confidence            67899998887  567788889988899999887    3555544443    333321011111111111 01 11 259


Q ss_pred             cEEEeCCCCc-------cHHHHHHhcccCCEEEEEe
Q 017064          263 ALGFNCVGGN-------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       263 Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g  291 (378)
                      |+|+......       .++...+.|+|||+++...
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            9998654421       2367889999999998865

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.79  E-value=0.04  Score=43.34  Aligned_cols=97  Identities=12%  Similarity=0.183  Sum_probs=52.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|+|+|++|-+|...++.+.. .+.++.++++...+.....+.-.-.|...   ..-.-...+.+....   +|++||++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~---~~~~v~~~l~~~~~~---~DVvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP---LGVPVTDDLEELLEE---ADVVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST----SSBEBS-HHHHTTH----SEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC---cccccchhHHHhccc---CCEEEEcC
Confidence            589999999999999999987 68888888764321111111111111110   000001234444433   89999999


Q ss_pred             CCccHHHHHHhcccCCEEEEEecC
Q 017064          270 GGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       270 g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      ..+.....++.....|.-+.+|.+
T Consensus        76 ~p~~~~~~~~~~~~~g~~~ViGTT   99 (124)
T PF01113_consen   76 NPDAVYDNLEYALKHGVPLVIGTT   99 (124)
T ss_dssp             -HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred             ChHHhHHHHHHHHhCCCCEEEECC
Confidence            665555555444445666667644

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.78  E-value=0.2  Score=45.18  Aligned_cols=95  Identities=16%  Similarity=0.182  Sum_probs=67.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+|.|.|+ |.+|.-++.+|.-+|++|++..    -+.+|+..+.. ++.+ +.+-++   ...+.+...   +.|++|.
T Consensus       169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild----~n~~rl~~ldd~f~~rv~~~~st---~~~iee~v~---~aDlvIg  237 (371)
T COG0686         169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILD----LNIDRLRQLDDLFGGRVHTLYST---PSNIEEAVK---KADLVIG  237 (371)
T ss_pred             ccEEEECC-ccccchHHHHHhccCCeeEEEe----cCHHHHhhhhHhhCceeEEEEcC---HHHHHHHhh---hccEEEE
Confidence            35778888 9999999999999999999988    47778777765 4443 222222   233444433   3899998


Q ss_pred             CCC---C--c--cHHHHHHhcccCCEEEEEecCCC
Q 017064          268 CVG---G--N--SASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       268 ~~g---~--~--~~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      ++=   .  +  ..++.+..|+||+.+|.+.-..+
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence            653   1  2  13677899999999999984444

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.78  E-value=0.24  Score=43.15  Aligned_cols=92  Identities=18%  Similarity=0.163  Sum_probs=60.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      -+|.+||=.||+|  |+++.-+|+ .|++|+++.    -+++-.+.++    +-|..  +++.....+++....   +.|
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD----~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~---~~F  125 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGID----ASEKPIEVAKLHALESGVN--IDYRQATVEDLASAG---GQF  125 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEec----CChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcC---CCc
Confidence            4788999999855  465555555 479999987    4566555554    33433  556665555544432   369


Q ss_pred             cEEEe-----CCCCcc--HHHHHHhcccCCEEEEE
Q 017064          263 ALGFN-----CVGGNS--ASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       263 Dvvid-----~~g~~~--~~~~~~~l~~~G~~v~~  290 (378)
                      |+|+.     -+..+.  +..+.++++|+|.+++.
T Consensus       126 DvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         126 DVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             cEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            99985     333332  36788999999998754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.76  E-value=0.18  Score=45.03  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=28.9

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEe
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~  220 (378)
                      +|+++||+|+++  ++|...+..+...|++|+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            578999999974  899999988889999998874

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=94.75  E-value=0.22  Score=45.24  Aligned_cols=93  Identities=15%  Similarity=0.094  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC----CcEEEccCcccHHHHHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG----ADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g----a~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      ..+++|+|.|+ |+.|.+++..+...|++.+.+++.   +.+|.+ ++++++    ...+...     +.+.....   .
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR---~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~---~  192 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV---DPARAAALADELNARFPAARATAG-----SDLAAALA---A  192 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHHHhhCCCeEEEec-----cchHhhhC---C
Confidence            34689999999 999999999999999854555432   344433 333332    1122111     11222222   3


Q ss_pred             CcEEEeCCCCcc-----HHHHHHhcccCCEEEEEe
Q 017064          262 PALGFNCVGGNS-----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       262 ~Dvvid~~g~~~-----~~~~~~~l~~~G~~v~~g  291 (378)
                      +|+||+|+....     ..-....++++..++.+-
T Consensus       193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~Div  227 (284)
T PRK12549        193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIV  227 (284)
T ss_pred             CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence            999999964211     111124566666666554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.73  E-value=0.2  Score=46.81  Aligned_cols=84  Identities=14%  Similarity=0.193  Sum_probs=51.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc------------------HHH----HHHHHhCCCcEEEccCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS------------------DEA----KEKLKGLGADEVFTESQ  246 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~------------------~~~----~~~~~~~ga~~vi~~~~  246 (378)
                      +.+|+|.|+ |++|..++..+...|...+.++|.+.-.                  ..|    .+.++++..+.-+....
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            368999999 9999999999999999777776653200                  012    13344444333222211


Q ss_pred             --ccHHHHHHHhcCCCCCcEEEeCCCCccHHH
Q 017064          247 --LEVKNVKGLLANLPEPALGFNCVGGNSASK  276 (378)
Q Consensus       247 --~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~  276 (378)
                        ...+.+..+..+   +|+||||+.+.....
T Consensus       103 ~~~~~~~~~~~~~~---~DlVid~~D~~~~r~  131 (338)
T PRK12475        103 TDVTVEELEELVKE---VDLIIDATDNFDTRL  131 (338)
T ss_pred             ccCCHHHHHHHhcC---CCEEEEcCCCHHHHH
Confidence              122344455443   999999998765533

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.71  E-value=0.31  Score=43.87  Aligned_cols=97  Identities=16%  Similarity=0.234  Sum_probs=69.1

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++...+..|....---.|++|+|.|.+..+|.=.+.++...||+|+ ++...  +                    
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~--T--------------------  191 (281)
T PRK14183        135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIF--T--------------------  191 (281)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCC--C--------------------
Confidence            356777776766666533235689999999988999999999999999886 44211  1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+.   ..|+++-++|.+.+ ---+++++|-.++.+|..
T Consensus       192 ~---~l~~~~~---~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin  231 (281)
T PRK14183        192 K---DLKAHTK---KADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             c---CHHHHHh---hCCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence            0   1222233   39999999998776 224789999999999943

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.71  E-value=0.27  Score=44.30  Aligned_cols=96  Identities=14%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-..   +                    .
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~---T--------------------~  192 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR---T--------------------K  192 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---C--------------------C
Confidence            5677777777777653333568999999999999999999999999988754311   1                    1


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         .+.+.+.   ..|++|-++|.+.+ ---+++++|-.++.+|..
T Consensus       193 ---~l~~~~~---~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin  231 (284)
T PRK14170        193 ---DLPQVAK---EADILVVATGLAKF-VKKDYIKPGAIVIDVGMD  231 (284)
T ss_pred             ---CHHHHHh---hCCEEEEecCCcCc-cCHHHcCCCCEEEEccCc
Confidence               1222333   29999999998776 224789999999999844

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.70  E-value=0.12  Score=52.72  Aligned_cols=81  Identities=17%  Similarity=0.110  Sum_probs=55.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-----------------cHHHHHHHHhCCCcEEEccCcccHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQLEVK  250 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ga~~vi~~~~~~~~  250 (378)
                      .+++|+|.|+ |+.|+.++..++..|.+|++..+....                 ...+.++++++|.+..++..-....
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            4899999999 999999999999999998877643210                 0124567788998877665321101


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc
Q 017064          251 NVKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      .+..+..   .+|.||.++|..
T Consensus       388 ~~~~l~~---~~DaV~latGa~  406 (639)
T PRK12809        388 TFSDLTS---EYDAVFIGVGTY  406 (639)
T ss_pred             CHHHHHh---cCCEEEEeCCCC
Confidence            1222222   399999999964

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=94.68  E-value=0.22  Score=44.13  Aligned_cols=35  Identities=26%  Similarity=0.386  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|+++++|...+..+...|++++++.+.
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~   38 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARR   38 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence            46899999999999999998888999998888865

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.66  E-value=0.27  Score=44.40  Aligned_cols=95  Identities=15%  Similarity=0.193  Sum_probs=69.8

Q ss_pred             hccccHHHHHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          168 TIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      .+||++...+..|.. .++ -.|++|+|.|.+..+|.=...++...|++|++.-..   +                    
T Consensus       134 ~~PcTp~avi~lL~~-~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~---T--------------------  189 (287)
T PRK14173        134 LEPCTPAGVVRLLKH-YGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK---T--------------------  189 (287)
T ss_pred             CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC---C--------------------
Confidence            567777777766765 343 468999999999999999999999999988754311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+.   ..|+||-++|.+.+- --+++++|-.++.+|..
T Consensus       190 ~---~l~~~~~---~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin  229 (287)
T PRK14173        190 Q---DLPAVTR---RADVLVVAVGRPHLI-TPEMVRPGAVVVDVGIN  229 (287)
T ss_pred             C---CHHHHHh---hCCEEEEecCCcCcc-CHHHcCCCCEEEEccCc
Confidence            1   1223333   299999999987663 35788999999999844

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.65  E-value=0.29  Score=44.29  Aligned_cols=97  Identities=15%  Similarity=0.200  Sum_probs=70.7

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      +.+||++...+..|....---.|++|+|.|.+..+|.=...++...+++|++.-..   +                    
T Consensus       138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~---T--------------------  194 (294)
T PRK14187        138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA---T--------------------  194 (294)
T ss_pred             CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC---C--------------------
Confidence            45677777777777664334568999999999999999999999999998754311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+.   ..|++|-++|.+.+ ---+++++|-.+|.+|-.
T Consensus       195 ~---~l~~~~~---~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin  234 (294)
T PRK14187        195 R---DLADYCS---KADILVAAVGIPNF-VKYSWIKKGAIVIDVGIN  234 (294)
T ss_pred             C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence            1   1223333   29999999998776 224688999999999843

>PRK08317 hypothetical protein; Provisional

Probab=94.65  E-value=0.15  Score=44.62  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=61.5

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC----CC-cEEEccCcccHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL----GA-DEVFTESQLEVKNVK  253 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~i~  253 (378)
                      .....+.++++||-.|+ |. |..+..+++..+  .+++++.    .+++..+.+++.    +. ..++..+.   ... 
T Consensus        12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d----~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-   81 (241)
T PRK08317         12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGID----RSEAMLALAKERAAGLGPNVEFVRGDA---DGL-   81 (241)
T ss_pred             HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHHhhCCCCceEEEeccc---ccC-
Confidence            34567889999999998 43 889999998874  5677666    356655655543    11 11111111   110 


Q ss_pred             HHhcCCCCCcEEEeCCC-----C--ccHHHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVG-----G--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g-----~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ....  +.+|+|+....     .  ..+....++|+++|.++...
T Consensus        82 ~~~~--~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         82 PFPD--GSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCC--CCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            0111  24999886432     1  23477889999999998775

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.61  E-value=0.11  Score=47.18  Aligned_cols=60  Identities=17%  Similarity=0.236  Sum_probs=43.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+...|.+|+++.+.                  ..|.  .+.+.+.+...+.. +|+||++++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~--~~~~~~~~~~~~~~-~d~vi~~a~   59 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDL--TDPEALERLLRAIR-PDAVVNTAA   59 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCC--CCHHHHHHHHHhCC-CCEEEECCc
Confidence            48999999999999999998889999888742                  0111  12344555554433 799999987


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        60 ~   60 (287)
T TIGR01214        60 Y   60 (287)
T ss_pred             c
Confidence            4

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.58  E-value=1  Score=44.81  Aligned_cols=86  Identities=19%  Similarity=0.181  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|+|. |.+|...++.++.+|++|++..+..  +.+   ...+.|+..+         .+.++..   ..|+|+.
T Consensus       139 ~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~--~~~---~~~~~g~~~~---------~l~ell~---~aDiV~l  200 (526)
T PRK13581        139 YGKTLGIIGL-GRIGSEVAKRAKAFGMKVIAYDPYI--SPE---RAAQLGVELV---------SLDELLA---RADFITL  200 (526)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC--Chh---HHHhcCCEEE---------cHHHHHh---hCCEEEE
Confidence            4789999999 9999999999999999998876421  222   2234454332         1222222   2677776


Q ss_pred             CCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++....     + ...+..|+++..+|.++
T Consensus       201 ~lP~t~~t~~li~~~~l~~mk~ga~lIN~a  230 (526)
T PRK13581        201 HTPLTPETRGLIGAEELAKMKPGVRIINCA  230 (526)
T ss_pred             ccCCChHhhcCcCHHHHhcCCCCeEEEECC
Confidence            665421     1 45566677776666665

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.57  E-value=0.15  Score=42.40  Aligned_cols=94  Identities=17%  Similarity=0.275  Sum_probs=61.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|.|.|++|-+|...++-|+.+|-.|++++|    ++.|....+   ...++.-+-.+...+.+...   ++|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR----n~~K~~~~~---~~~i~q~Difd~~~~a~~l~---g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVR----NASKLAARQ---GVTILQKDIFDLTSLASDLA---GHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEe----ChHhccccc---cceeecccccChhhhHhhhc---CCceEEEecc
Confidence            5789999999999999999999999999996    555543321   11222222223334444444   3999999998


Q ss_pred             CccH----------HHHHHhcccC--CEEEEEecCC
Q 017064          271 GNSA----------SKVLKFLSQG--GTMVTYGGMS  294 (378)
Q Consensus       271 ~~~~----------~~~~~~l~~~--G~~v~~g~~~  294 (378)
                      ....          +..+..++.-  -|+..+|+..
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            6411          2345666653  3777777543

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.57  E-value=0.37  Score=43.49  Aligned_cols=98  Identities=9%  Similarity=0.100  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      ..+.+|.+ .....+++++|+|+ |+.+.+++..++..|++ ++++.|    +.++.+ +++.++...    .    ..+
T Consensus       109 Gf~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR----~~~~a~~la~~~~~~~----~----~~~  174 (272)
T PRK12550        109 AIAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVAR----NEKTGKALAELYGYEW----R----PDL  174 (272)
T ss_pred             HHHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHhCCcc----h----hhc
Confidence            34445544 34455679999999 99999999999889986 655554    344443 344454211    0    011


Q ss_pred             HHHhcCCCCCcEEEeCCCCccH--------HHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGGNSA--------SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~~--------~~~~~~l~~~G~~v~~g  291 (378)
                          ... .+|+||+|+.....        .-....+++...++.+-
T Consensus       175 ----~~~-~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~v  216 (272)
T PRK12550        175 ----GGI-EADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVV  216 (272)
T ss_pred             ----ccc-cCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEee
Confidence                011 38999999863221        01234566666666554

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.53  E-value=0.31  Score=43.29  Aligned_cols=34  Identities=12%  Similarity=0.189  Sum_probs=29.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      ..+|+|.|+ |++|..++..+...|..-+.++|.+
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            378999999 9999999999999999877777653

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.51  E-value=0.34  Score=42.98  Aligned_cols=103  Identities=10%  Similarity=0.073  Sum_probs=63.7

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccH-HHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV-KNVK  253 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~-~~i~  253 (378)
                      ..+.+....++||=.|  ..+|+.++.+|+.+  +.+++.+..    .++..+.+    +..|...-+.....+. +.+.
T Consensus        72 ~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~----~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~  145 (247)
T PLN02589         72 NMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDI----NRENYELGLPVIQKAGVAHKIDFREGPALPVLD  145 (247)
T ss_pred             HHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCceEEEeccHHHHHH
Confidence            3345555667899998  58899999999876  457766663    44444444    5567443333332232 3344


Q ss_pred             HHhcC---CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEE
Q 017064          254 GLLAN---LPEPALGFNCVGGN----SASKVLKFLSQGGTMVT  289 (378)
Q Consensus       254 ~~~~~---~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~  289 (378)
                      ++...   .+.||.||--+.-.    .+..+++++++||.++.
T Consensus       146 ~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        146 QMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             HHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            43321   13599998555432    34678899999999764

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.50  E-value=0.18  Score=46.79  Aligned_cols=33  Identities=15%  Similarity=0.124  Sum_probs=29.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~  221 (378)
                      .|+++.|+|. |.+|+..++.++ .+|++|++..+
T Consensus       144 ~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~  177 (323)
T PRK15409        144 HHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNAR  177 (323)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECC
Confidence            4689999999 999999999998 99999987653

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.50  E-value=0.35  Score=43.56  Aligned_cols=97  Identities=16%  Similarity=0.178  Sum_probs=70.7

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..++..|....---.|++|+|.|.+..+|.=...++...+++|++.=..   +                    
T Consensus       135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~---T--------------------  191 (282)
T PRK14166        135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---T--------------------  191 (282)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---C--------------------
Confidence            45677777777777663333579999999999999999999999899998754310   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+...+..   .|++|-++|.+.+- --+++++|-.++.+|-.
T Consensus       192 ~---nl~~~~~~---ADIvIsAvGkp~~i-~~~~vk~GavVIDvGin  231 (282)
T PRK14166        192 K---DLSLYTRQ---ADLIIVAAGCVNLL-RSDMVKEGVIVVDVGIN  231 (282)
T ss_pred             C---CHHHHHhh---CCEEEEcCCCcCcc-CHHHcCCCCEEEEeccc
Confidence            1   13333332   99999999987762 23689999999999943

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=94.49  E-value=0.1  Score=45.38  Aligned_cols=101  Identities=16%  Similarity=0.123  Sum_probs=60.9

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCc-------c----cHHH
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQ-------L----EVKN  251 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~-------~----~~~~  251 (378)
                      ....++.+|||.|+  |-|+-+..||. .|.+|+++.    -++...+.+ ++.+....+....       .    ...+
T Consensus        33 l~~~~~~rvLvPgC--G~g~D~~~La~-~G~~VvGvD----ls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD  105 (218)
T PF05724_consen   33 LALKPGGRVLVPGC--GKGYDMLWLAE-QGHDVVGVD----LSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGD  105 (218)
T ss_dssp             HTTSTSEEEEETTT--TTSCHHHHHHH-TTEEEEEEE----S-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-
T ss_pred             cCCCCCCeEEEeCC--CChHHHHHHHH-CCCeEEEEe----cCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcc
Confidence            55788889999997  55666777776 499999987    577777766 3444322211110       0    0012


Q ss_pred             HHHHhcC-CCCCcEEEeCCCCcc---------HHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLAN-LPEPALGFNCVGGNS---------ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~-~g~~Dvvid~~g~~~---------~~~~~~~l~~~G~~v~~g  291 (378)
                      +-.+... .|+||.|+|++.--.         .++..++|+++|++.++.
T Consensus       106 fF~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi~  155 (218)
T PF05724_consen  106 FFELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLIT  155 (218)
T ss_dssp             TTTGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEEE
T ss_pred             cccCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            2222211 125999999877321         267789999999954443

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.49  E-value=0.33  Score=44.74  Aligned_cols=89  Identities=18%  Similarity=0.336  Sum_probs=58.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+|.|.|+ |.+|...+..++..|.  +|+++.    .++++.+.+++.|....+..   +   ..+...   ..|+||.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~d----r~~~~~~~a~~~g~~~~~~~---~---~~~~~~---~aDvVii   72 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGAD----RSAETRARARELGLGDRVTT---S---AAEAVK---GADLVIL   72 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEE----CCHHHHHHHHhCCCCceecC---C---HHHHhc---CCCEEEE
Confidence            57999998 9999999988888785  666665    35667777777775322111   1   111122   3899999


Q ss_pred             CCCCccH----HHHHHhcccCCEEEEEec
Q 017064          268 CVGGNSA----SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       268 ~~g~~~~----~~~~~~l~~~G~~v~~g~  292 (378)
                      |+.....    ......++++..++.++.
T Consensus        73 avp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         73 CVPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            9987544    233345667777766653

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.48  E-value=0.2  Score=45.27  Aligned_cols=103  Identities=19%  Similarity=0.205  Sum_probs=59.4

Q ss_pred             HHHHHHHHHh--ccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH-HhCCCcE----EEccCc
Q 017064          175 TALRMLEDFT--TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGADE----VFTESQ  246 (378)
Q Consensus       175 ta~~~l~~~~--~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~ga~~----vi~~~~  246 (378)
                      .-+.+|.+..  ...+|++++|.|+ |+.+.+++.-++..|+ +++++-|    +.+|.+.+ +.++...    .....+
T Consensus       110 G~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NR----t~~ra~~La~~~~~~~~~~~~~~~~~  184 (283)
T COG0169         110 GFLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNR----TRERAEELADLFGELGAAVEAAALAD  184 (283)
T ss_pred             HHHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhhhcccccccccccc
Confidence            3445555422  2345899999999 9999999999999997 4555554    44444333 3333211    111111


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHH------HHHHhcccCCEEEEEe
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSAS------KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~------~~~~~l~~~G~~v~~g  291 (378)
                      .  +...       .+|++|+|++.....      ....++++.-.+..+-
T Consensus       185 ~--~~~~-------~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~v  226 (283)
T COG0169         185 L--EGLE-------EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVV  226 (283)
T ss_pred             c--cccc-------ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence            0  0100       289999999742211      0146666666666664

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.48  E-value=0.37  Score=44.47  Aligned_cols=86  Identities=16%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|+|. |.+|...++.++.+|++|++..+..    ++.     -+.+...  .   ..++.++..+   .|+|+.
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~----~~~-----~~~~~~~--~---~~~l~e~l~~---aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSR----KSW-----PGVQSFA--G---REELSAFLSQ---TRVLIN  196 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC----CCC-----CCceeec--c---cccHHHHHhc---CCEEEE
Confidence            5789999999 9999999999999999999876431    110     0111111  0   1123333332   677776


Q ss_pred             CCCCccH------HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSA------SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~------~~~~~~l~~~G~~v~~g  291 (378)
                      +......      ...++.|+++..+|.++
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence            6664221      34566777777666665

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=94.46  E-value=0.16  Score=48.25  Aligned_cols=77  Identities=14%  Similarity=0.048  Sum_probs=48.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +..+.+|||+|++|-+|...+..+...|.+|+++.+...   ..... ..++. ..+..+-.+...+.+...   ++|+|
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~---~~~~~-~~~~~-~~~~~Dl~d~~~~~~~~~---~~D~V   89 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKN---EHMSE-DMFCH-EFHLVDLRVMENCLKVTK---GVDHV   89 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccc---ccccc-ccccc-eEEECCCCCHHHHHHHHh---CCCEE
Confidence            356789999999999999999999999999999885321   00000 01121 222222223344444443   39999


Q ss_pred             EeCCC
Q 017064          266 FNCVG  270 (378)
Q Consensus       266 id~~g  270 (378)
                      |++++
T Consensus        90 ih~Aa   94 (370)
T PLN02695         90 FNLAA   94 (370)
T ss_pred             EEccc
Confidence            99985

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.44  E-value=0.32  Score=44.98  Aligned_cols=100  Identities=14%  Similarity=0.212  Sum_probs=62.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC----CcEEEEecCCCCcHHHHHHHHhCCCc--------------EEEccCcccH---
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG----IHSINIIRDRAGSDEAKEKLKGLGAD--------------EVFTESQLEV---  249 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g----~~vi~~~~~~~~~~~~~~~~~~~ga~--------------~vi~~~~~~~---  249 (378)
                      +|.|.|. |.+|....+.+...+    ..++.+.+.  .+.+...++.+++-.              .+++.+.-.+   
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~--~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~   77 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNEL--ADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHS   77 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecC--CCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEc
Confidence            3789999 999999999987654    677777654  345555555443311              1122111111   


Q ss_pred             HHHHHHh-cCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCC
Q 017064          250 KNVKGLL-ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       250 ~~i~~~~-~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .+...+. +..+ +|+||+|+|.... ..+..++..|+..|.++...
T Consensus        78 ~~p~~~~w~~~g-vDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~  123 (325)
T TIGR01532        78 PTPEALPWRALG-VDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG  123 (325)
T ss_pred             CChhhccccccC-CCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence            1122211 2234 9999999998654 56778889998999888553

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=94.44  E-value=0.97  Score=45.00  Aligned_cols=87  Identities=18%  Similarity=0.196  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|+|. |.+|...++.++.+|++|++..+.  ...+   ...++|...+        ..+.++...   .|+|+-
T Consensus       137 ~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~--~~~~---~~~~~g~~~~--------~~l~ell~~---aDvV~l  199 (525)
T TIGR01327       137 YGKTLGVIGL-GRIGSIVAKRAKAFGMKVLAYDPY--ISPE---RAEQLGVELV--------DDLDELLAR---ADFITV  199 (525)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC--CChh---HHHhcCCEEc--------CCHHHHHhh---CCEEEE
Confidence            4689999999 999999999999999999887642  1222   2234443211        012222222   666666


Q ss_pred             CCCCc-c----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGN-S----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~-~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +.... .    + ...+..|+++..+|.++
T Consensus       200 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  229 (525)
T TIGR01327       200 HTPLTPETRGLIGAEELAKMKKGVIIVNCA  229 (525)
T ss_pred             ccCCChhhccCcCHHHHhcCCCCeEEEEcC
Confidence            55532 1    1 34556666666666555

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.43  E-value=0.36  Score=43.87  Aligned_cols=96  Identities=14%  Similarity=0.143  Sum_probs=69.2

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      ..||++...+..|....---.|++|+|.|.+..+|.=...++...||+|++.-..   +                    .
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~---T--------------------~  193 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR---T--------------------Q  193 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC---C--------------------C
Confidence            4567766666666653323468999999999999999999999999998765311   1                    0


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         .+...+.   ..|++|-++|.+.+ ---+++++|-.+|.+|..
T Consensus       194 ---~l~~~~~---~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin  232 (297)
T PRK14186        194 ---DLASITR---EADILVAAAGRPNL-IGAEMVKPGAVVVDVGIH  232 (297)
T ss_pred             ---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence               1223333   29999999998765 224789999999999944

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.42  E-value=1.1  Score=39.25  Aligned_cols=94  Identities=16%  Similarity=0.202  Sum_probs=57.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCc--EEEEecCC----CCc-----HHHHHHHHhCCCcEEEccCcccHHHHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH--SINIIRDR----AGS-----DEAKEKLKGLGADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~--vi~~~~~~----~~~-----~~~~~~~~~~ga~~vi~~~~~~~~~i~~~  255 (378)
                      -.+.+|+|+|+ |+.|...+..+...|++  .+.+++.+    ...     +.+..+++.++... .+   .+   +.+.
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~---l~~~   94 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT---LKEA   94 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC---HHHH
Confidence            45689999999 99999999888888987  44444432    111     12244555554321 11   11   2122


Q ss_pred             hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ..   ++|++|++++...+ ...++.++++..++.+.
T Consensus        95 l~---~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          95 LK---GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             Hh---cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            22   38999999985444 46667777776655443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.40  E-value=0.5  Score=42.67  Aligned_cols=97  Identities=15%  Similarity=0.182  Sum_probs=69.8

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHH----cCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH----RGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~----~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      ..+||++...+..|....---.|++|+|.|.+..+|.=...++..    .+|+|++.-.    ..               
T Consensus       135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs----~t---------------  195 (286)
T PRK14184        135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS----RT---------------  195 (286)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC----Cc---------------
Confidence            356777777777776643335689999999999999999999987    7888876541    11               


Q ss_pred             ccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          243 TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       243 ~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                             ..+.+.+.   ..|+||-++|.+.+-. -+++++|..++.+|..
T Consensus       196 -------~~l~~~~~---~ADIVI~AvG~p~li~-~~~vk~GavVIDVGi~  235 (286)
T PRK14184        196 -------PDLAEECR---EADFLFVAIGRPRFVT-ADMVKPGAVVVDVGIN  235 (286)
T ss_pred             -------hhHHHHHH---hCCEEEEecCCCCcCC-HHHcCCCCEEEEeeee
Confidence                   11223333   2999999999877622 3677999999999843

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=94.39  E-value=0.23  Score=43.64  Aligned_cols=77  Identities=10%  Similarity=0.098  Sum_probs=46.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      +||+|+++++|...++.+...|++|+++.+..   +++.    +.+++.+.. +.+..+-.+   ... +.+.....+..
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG---RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999998887532   2222    222334432 222222111   222 22222223358


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |.+|.++|.
T Consensus        78 ~~li~~ag~   86 (239)
T TIGR01831        78 YGVVLNAGI   86 (239)
T ss_pred             CEEEECCCC
Confidence            999998873

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.35  E-value=0.31  Score=42.25  Aligned_cols=33  Identities=15%  Similarity=0.226  Sum_probs=28.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      .+|+|.|+ |++|...++.+...|..-+.++|.+
T Consensus        29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            68999999 9999999988888899877777653

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=94.34  E-value=0.27  Score=44.24  Aligned_cols=77  Identities=10%  Similarity=0.107  Sum_probs=51.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|=+|.-++..+...|.+|+++.....+..+......  +  .++..+-.+.+.+.+...... +|.||.+++
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--~--~f~~gDi~D~~~L~~vf~~~~-idaViHFAa   76 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--F--KFYEGDLLDRALLTAVFEENK-IDAVVHFAA   76 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--C--ceEEeccccHHHHHHHHHhcC-CCEEEECcc
Confidence            69999999999999888888899999998766545554443322  1  122222223344555555544 999999998


Q ss_pred             Cc
Q 017064          271 GN  272 (378)
Q Consensus       271 ~~  272 (378)
                      ..
T Consensus        77 ~~   78 (329)
T COG1087          77 SI   78 (329)
T ss_pred             cc
Confidence            53

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=94.32  E-value=0.34  Score=44.77  Aligned_cols=97  Identities=12%  Similarity=0.139  Sum_probs=70.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..+...|....---.|++|+|.|-+..+|.=...++...+|+|++.-..   +                    
T Consensus       192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~---T--------------------  248 (345)
T PLN02897        192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF---T--------------------  248 (345)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC---C--------------------
Confidence            45677777777667653333569999999999999999999999999998654311   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+.   ..|+||-++|.+.+ ---+++++|-.+|.+|..
T Consensus       249 ~---nl~~~~~---~ADIvIsAvGkp~~-v~~d~vk~GavVIDVGin  288 (345)
T PLN02897        249 K---DPEQITR---KADIVIAAAGIPNL-VRGSWLKPGAVVIDVGTT  288 (345)
T ss_pred             C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEcccc
Confidence            0   1222333   39999999998776 224789999999999943

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.29  E-value=0.29  Score=45.68  Aligned_cols=82  Identities=12%  Similarity=0.227  Sum_probs=50.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-----------H-------HH----HHHHHhCCCcEEEccCc-
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-----------D-------EA----KEKLKGLGADEVFTESQ-  246 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-----------~-------~~----~~~~~~~ga~~vi~~~~-  246 (378)
                      .+|+|.|+ |++|..+++.+...|..-+.++|.+.-.           +       .|    .+.++++..+.-+.... 
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            68999999 9999999998888899666666553100           0       11    23334444332222211 


Q ss_pred             -ccHHHHHHHhcCCCCCcEEEeCCCCccHH
Q 017064          247 -LEVKNVKGLLANLPEPALGFNCVGGNSAS  275 (378)
Q Consensus       247 -~~~~~i~~~~~~~g~~Dvvid~~g~~~~~  275 (378)
                       ...+.+..+..+   +|+||||+.+....
T Consensus       104 ~~~~~~~~~~~~~---~DlVid~~Dn~~~r  130 (339)
T PRK07688        104 DVTAEELEELVTG---VDLIIDATDNFETR  130 (339)
T ss_pred             cCCHHHHHHHHcC---CCEEEEcCCCHHHH
Confidence             122344455543   99999999986553

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=94.28  E-value=0.26  Score=46.22  Aligned_cols=79  Identities=10%  Similarity=0.149  Sum_probs=46.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC--Cc-EEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG--AD-EVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|||+|++|.+|...+..+...|.++++.++... .......+..+.  .. .++..+-.+.+.+.+.....+ +|+||+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~vih   79 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-YAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQ-PDAVMH   79 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCC-ccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcC-CCEEEE
Confidence            5899999999999999999888887554443211 111122222221  11 223333233445555554333 999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        80 ~A~~   83 (352)
T PRK10084         80 LAAE   83 (352)
T ss_pred             CCcc
Confidence            9974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	378
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		2e-72
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		3e-72
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		1e-44
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		2e-44
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		4e-44
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		5e-44
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		6e-43
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		2e-13
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-11
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		4e-09
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		6e-09
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		4e-08
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		5e-08
3pi7_A	349	Crystal Structure Of A Putative Nadph:quinone Reduc		1e-07
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-07
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-06
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-06
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		9e-05
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		2e-04
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		5e-04
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		6e-04
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		8e-04

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 196/328 (59%), Gaps = 2/328 (0%)
Query: 40  FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
           +SA   P   +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct: 5   YSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGN 64
Query: 99  YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
           Y + P++P                  T L PGDWVIP+    GTW++  V  +    +V 
Sbjct: 65  YGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP 124
Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
            D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct: 125 SDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTIN 184
Query: 219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
           ++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct: 185 VVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELL 244
Query: 279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
           + L++GGTMVTYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  
Sbjct: 245 RQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 304
Query: 339 LAREGKLKY-DMELVPFNNFQTALSKAL 365
           L R G+L       VP  ++Q+AL  ++
Sbjct: 305 LIRRGQLTAPACSQVPLQDYQSALEASM 332

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score =  268 bits (686), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 192/318 (60%), Gaps = 1/318 (0%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y + P++P  
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 87
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
                           T L PGDWVIP+    GTW++  V  +    +V  D P++ AAT
Sbjct: 88  GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 147
Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR    +
Sbjct: 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 207
Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288
             ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L++GGTMV
Sbjct: 208 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMV 267
Query: 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY- 347
           TYGGM+K+P+  S S  IFKDL L+GFWL +W       + + +I  L  L R G+L   
Sbjct: 268 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP 327
Query: 348 DMELVPFNNFQTALSKAL 365
               VP  ++Q+AL  ++
Sbjct: 328 ACSQVPLQDYQSALEASM 345

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 166/326 (50%), Gaps = 29/326 (8%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P  
Sbjct: 26  AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXXXXX---------XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 86  TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL----- 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   K     +        
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
            E  L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 325
Query: 320 WLSSEKATECRNMIDYLLCLAREGKL 345
            L + K  +  + ++ ++    EGKL
Sbjct: 326 LLKNNKELKT-STLNQIIAWYEEGKL 350

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXXXXX---------XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL----- 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   K     +        
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
            E  L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303
Query: 320 WLSSEKATECRNMIDYLLCLAREGKL 345
            L + K  +   + + ++    EGKL
Sbjct: 304 LLKNNKELKTSTL-NQIIAWYEEGKL 328

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 166/326 (50%), Gaps = 29/326 (8%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 26  AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXXXXX---------XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 86  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL----- 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +     +        
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
            E  L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 325
Query: 320 WLSSEKATECRNMIDYLLCLAREGKL 345
            L + K  +  + ++ ++    EGKL
Sbjct: 326 LLKNNKELKT-STLNQIIAWYEEGKL 350

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 166/326 (50%), Gaps = 29/326 (8%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXXXXX---------XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL----- 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +     +        
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
            E  L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303
Query: 320 WLSSEKATECRNMIDYLLCLAREGKL 345
            L + K  +  + ++ ++    EGKL
Sbjct: 304 LLKNNKELKT-STLNQIIAWYEEGKL 328

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GV P +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAK 63
Query: 106 PXXXXXXXXXX---------XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL----- 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +     +        
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
            E  L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303
Query: 320 WLSSEKATECRNMIDYLLCLAREGKL 345
            L + K  +  + ++ ++    EGKL
Sbjct: 304 LLKNNKELKT-STLNQIIAWYEEGKL 328

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 131/309 (42%), Gaps = 16/309 (5%)
Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           MS   K + + + G P  V++ +E   +E +K+N+V V+ML  PINPSD+  I G Y  R
Sbjct: 1   MSLHGKLIQFHKFGNPKDVLQ-VEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR 59
Query: 103 PKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
             +P                  +R   G  V+P     GTWQ Y VK  + +     DS 
Sbjct: 60  IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPL-RGEGTWQEY-VKTSADFVVPIPDSI 117
Query: 163 MEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
            ++ AA + +NPLTA     +   L   D ++ N   S +G    Q+++      I + R
Sbjct: 118 DDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR 177
Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
           +    ++  E+L  LGA  V   S   +      L N        + +GG   +++   L
Sbjct: 178 N----NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSL 233
Query: 282 SQGGTMVTYGGMSKKPIT---VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
              G  +T G +S   +    + T A +  ++    F L+ W       + +    +L+ 
Sbjct: 234 RPNGHFLTIGLLSGIQVNWAEIVTKAKVHANI----FHLRHWNDEVSPYKWQETFRHLIR 289
Query: 339 LAREGKLKY 347
           L    +L++
Sbjct: 290 LVENEQLRF 298

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 13/269 (4%)
Query: 52  VYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXX 110
           V+E  GP   V+K+     V + K++ V +K+ A  +NP +     G Y  +P +P    
Sbjct: 35  VFEFGGP--EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPG 92
Query: 111 XXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170
                         +    GD V  S   SG +  Y +      +K+ +    +  A I 
Sbjct: 93  SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIG 152
Query: 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK 230
           +   TA R L     + +G+S++ +GA+  VG    QIAR  G+     I   AG++E +
Sbjct: 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK----ILGTAGTEEGQ 208
Query: 231 EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG--FNCVGGNSASKVLKFLSQGGTMV 288
           + +   GA EVF  +  EV  +  +   + E  +      +   + SK L  LS GG ++
Sbjct: 209 KIVLQNGAHEVF--NHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVI 266
Query: 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
             G  S+  I ++    + K+ S+ G  L
Sbjct: 267 VVG--SRGTIEINPRDTMAKESSIIGVTL 293

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 30/240 (12%)
Query: 143 WQSYVVKDQSVWHKVSKDSPMEY-----AATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 197
           W ++ + D     K+  + P +        TI +  LTA   L +   +  G++++ + A
Sbjct: 95  WTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAA 154
Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
              VG  + QIA+ +G   +      AGSDE    LK +G D  F       K V  L  
Sbjct: 155 AGAVGSVVGQIAKLKGCKVVG----AAGSDEKIAYLKQIGFDAAFN-----YKTVNSLEE 205
Query: 258 NLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMV------TYGGMSKKPITVSTSAFI 306
            L + +  G++C    VGG   + VL  +   G +        Y  M + P   S  + I
Sbjct: 206 ALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESII 265
Query: 307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVP-FNNFQTALSKAL 365
           +K L ++GF + +W    +    R+++ ++L    EGK++Y   +   F N   A  + L
Sbjct: 266 YKQLRIEGFIVYRWQGDVREKALRDLMKWVL----EGKIQYHEHVTKGFENMPAAFIEML 321

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 130/325 (40%), Gaps = 43/325 (13%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           +AVV    G P+ V+++ +LP  E    +V V++ AA +N  D+   +GV   +  +P  
Sbjct: 2   RAVVMRARGGPE-VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSS--------------------------GT 142
                              APGD V+ +P  S                          GT
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YVV  ++      K+   E AA I +  LTA +M+ D   +  GD ++   A S V 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPE 261
              IQIA+  G   I      AGS++   + K LGADE    +  +  K V+ L      
Sbjct: 181 VAAIQIAKLFGARVIAT----AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGA 236
Query: 262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWL 321
             +  +  G      V+K  + GG +   G  S    T+  +   ++ LS+        L
Sbjct: 237 DKV-VDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI--------L 287
Query: 322 SSEKATECRNMIDYLLCLAREGKLK 346
            S  A++ R  +  +L    EGKLK
Sbjct: 288 GSTMASKSR--LFPILRFVEEGKLK 310

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
           L  G  V+ SP     W ++ + D     K+  +     P+  A   +  P LTA   L 
Sbjct: 78  LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 133
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           +   +  G++++ N A   VG  + QIA+ +G   +  +    GSDE    L+ LG D V
Sbjct: 134 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 189
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMVTYGGMSKK 296
           F       K V+ L   L + +  G++C    VGG  ++ V+  + + G +   G +S  
Sbjct: 190 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 244
Query: 297 PITVSTSA------FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 350
             T            I+++L ++ F + +W    +    ++++ ++L    EGK++Y   
Sbjct: 245 NRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVL----EGKIQYKEY 300
Query: 351 LVP-FNNFQTALSKAL 365
           ++  F N   A    L
Sbjct: 301 IIEGFENMPAAFMGML 316

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
           L  G  V+ SP     W ++ + D     K+  +     P+  A   +  P LTA   L 
Sbjct: 99  LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 154
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           +   +  G++++ N A   VG  + QIA+ +G   +  +    GSDE    L+ LG D V
Sbjct: 155 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 210
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMVTYGGMSKK 296
           F       K V+ L   L + +  G++C    VGG  ++ V+  + + G +   G +S  
Sbjct: 211 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 265
Query: 297 PITVSTSA------FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 350
             T            I+++L ++ F + +W    +    ++++ ++L    EGK++Y   
Sbjct: 266 NRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVL----EGKIQYKEY 321
Query: 351 LVP-FNNFQTALSKAL 365
           ++  F N   A    L
Sbjct: 322 IIEGFENMPAAFMGML 337

>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution Length = 349

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
           E  A  IVNPLTA+    D        + V     S + + II +A+  G   I  +R  
Sbjct: 141 EDGAAXIVNPLTAIAXF-DIVKQEGEKAFVXTAGASQLCKLIIGLAKEEGFRPIVTVR-- 197
Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283
              DE    LK +GA  V  E   + +     +    +P +  + V G  AS +     +
Sbjct: 198 --RDEQIALLKDIGAAHVLNEKAPDFEATLREVXKAEQPRIFLDAVTGPLASAIFNAXPK 255
Query: 284 GGTMVTYGGMSKKPITVSTSA-FIFKDLSLKGFWLQKW 320
               + YG +      +      IF+   ++GFWL +W
Sbjct: 256 RARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEW 293

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 45/331 (13%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG----VYPVRPK 104
           KA+ +++ GPP  V+K+++ P  E ++N   +K+ AA +NP D     G       ++  
Sbjct: 8   KAIQFDQFGPP-KVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 105 VPXXXXXXXXXXXXXXXXXXTRLAPGDWV-----IPSPPSSGTWQSYVVKD-QSVWHKVS 158
           +P                    +  GD V      P  P    +  YV     ++  K+ 
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPC--CYAEYVCASPDTIIQKLE 124
Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
           K S ++ AA++    LTAL+ L     +  GD ++ +     VG   IQ+A+ +G   I 
Sbjct: 125 KLSFLQ-AASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVIT 182
Query: 219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA-NLPEPALGFNCVGGNSASKV 277
               R  +      LK LGA++     + +      LLA + P  A+  + VGG+   + 
Sbjct: 183 TASKRNHA-----FLKALGAEQCINYHEEDF-----LLAISTPVDAV-IDLVGGDVGIQS 231
Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 337
           +  L + G +V     S   IT      + K    + F L K  + E+       + YL 
Sbjct: 232 IDCLKETGCIV-----SVPTITAGRVIEVAKQKHRRAFGLLKQFNIEE-------LHYLG 279
Query: 338 CLAREGKLKYDMELVPFNNFQTALSKALGLH 368
            L  E KL+ ++  +    FQ  LS+A+  H
Sbjct: 280 KLVSEDKLRIEISRI----FQ--LSEAVTAH 304

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 47  PSKAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           P  AV +++ G P+++ +K +  P     E +V +K+ A+ +N +D+ + +G Y   P  
Sbjct: 6   PMLAVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 106 PXXXXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKV 157
                                L PG        D  +   P  G  Q YV   + +   +
Sbjct: 64  -------SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPI 115
Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
            +   +  AA I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G  +I
Sbjct: 116 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AI 173
Query: 218 NIIRDRAGSDEAKEKLKGLGA-------DEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270
            ++   AGS +  +  + LGA        E F+E+ L  K  KG   NL       +C+G
Sbjct: 174 PLV--TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATL--KFTKGAGVNLI-----LDCIG 224
Query: 271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSL 312
           G+   K +  L+  G  V YG M    I     S  +FK  SL
Sbjct: 225 GSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSL 267

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 50  AVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           AV +++ G P+++ +K +  P     E +V +K+ A+ +N +D+ + +G Y   P     
Sbjct: 25  AVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA--- 79
Query: 109 XXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKVSKD 160
                             L PG        D  +   P  G  Q YV   + +   + + 
Sbjct: 80  ----SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPIPEG 134
Query: 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
             +  AA I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G  +I ++
Sbjct: 135 LTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLV 192
Query: 221 RDRAGSDEAKEKLKGLGA-------DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS 273
              AGS +  +  + LGA        E F+E+ L  K  KG   NL       +C+GG+ 
Sbjct: 193 --TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATL--KFTKGAGVNLI-----LDCIGGSY 243
Query: 274 ASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSL 312
             K +  L+  G  V YG M    I     S  +FK  SL
Sbjct: 244 WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSL 283

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 26/260 (10%)
Query: 46  PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           P  + V+   E     VIK  + P   + E ++ +K     +N  +    +G+YP     
Sbjct: 6   PEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK-- 63
Query: 106 PXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYV-VKDQSVWHKVSK---DS 161
           P                  T    GD V  +  S+ T+  Y  +  Q    K+ K   D 
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQV--AYISNSTFAQYSKISSQGPVMKLPKGTSDE 121
Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
            ++  A  ++  LTAL    +   +  GD ++   A   VG  + Q+ + +G H+I +  
Sbjct: 122 ELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAV-- 179
Query: 222 DRAGSDEAKEKLKGLGADEVFTESQ-------LEVKNVKGLLANLPEPALGFNCVGGNSA 274
             A +DE  +  K  GA+ +   S+       L+  N KG+ A+       F+ VG ++ 
Sbjct: 180 --ASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS-------FDSVGKDTF 230
Query: 275 SKVLKFLSQGGTMVTYGGMS 294
              L  L + G  V++G  S
Sbjct: 231 EISLAALKRKGVFVSFGNAS 250

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 12/222 (5%)
Query: 160 DSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
           D P+ Y   ++  P +TA     +  +   G+++  + A+  VGQ + Q+A+  G + + 
Sbjct: 126 DVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185
Query: 219 IIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASK 276
                AGS E  + LK   G D+ F   + E      L    P    + F  VGG     
Sbjct: 186 ----SAGSKEKVDLLKTKFGFDDAFNYKE-ESDLTAALKRCFPNGIDIYFENVGGKMLDA 240
Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           VL  ++  G +   G +S+  +          ++  K   +Q ++ S+   +    ++++
Sbjct: 241 VLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFV 300
Query: 337 LCLAREGKLKYDMELVPFNNFQTALSKALGL-HGSQ-PKQVI 376
           L   REGK+ Y  ++   +  + A    +GL HG    KQV+
Sbjct: 301 LPHIREGKITYVEDVA--DGLEKAPEALVGLFHGKNVGKQVV 340

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 125 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT 184
           T LAPGD V+   P +  +    V D  +  ++        AA++ +  LTA   L D  
Sbjct: 284 TGLAPGDRVMGMIPKA--FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLA 341
Query: 185 TLNSGDSIVQNGATSIVGQCIIQIARHRG 213
            L  G+S++ + A   VG   IQ+ARH G
Sbjct: 342 GLRPGESLLVHSAAGGVGMAAIQLARHLG 370

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 100/260 (38%), Gaps = 28/260 (10%)
Query: 76  NDVCVKMLAAPINP---SDINRIEGVY--PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG 130
           NDV VK L    +P   S + +IEG Y     P  P                   +   G
Sbjct: 41  NDVVVKNLYLSCDPYMRSRMRKIEGSYVESFAPGSPITGYGVAKVLESGD----PKFQKG 96
Query: 131 DWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLN 187
           D V         W+ Y  +   Q+++    KD P+ Y   I+  P +TA     +  +  
Sbjct: 97  DLVW----GMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPK 152
Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ 246
            G+++  + A+  VGQ + Q A+  G + +      AGS E  + LK   G DE F   +
Sbjct: 153 KGETVFVSAASGAVGQLVGQFAKMLGCYVVG----SAGSKEKVDLLKSKFGFDEAFNYKE 208
Query: 247 LEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTS-- 303
            E      L    P+   + F  VGG     VL  +   G +   G +S+  +  +    
Sbjct: 209 -EQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVH 267
Query: 304 ---AFIFKDLSLKGFWLQKW 320
                I K + ++GF +  +
Sbjct: 268 NLFCLITKRIRMEGFLVFDY 287

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
           AAT  V  LTA   L +   L+ G+ ++ + AT  VG   + IA+  G      I   AG
Sbjct: 16  AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR----IYTTAG 71
Query: 226 SDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
           SD  +E L  LG + V       F +  LE+ +  G+   L       N + G +  + +
Sbjct: 72  SDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVL-------NSLAGEAIQRGV 124
Query: 279 KFLSQGGTMVTYGGMSKKPITVSTS---AFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 335
           + L+ GG  +  G   KK +    S   A + K  S     L   L  + A   R ++ +
Sbjct: 125 QILAPGGRFIELG---KKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA-RYRQLLQH 180
Query: 336 LLCLAREGKLKYDMELVPFNNF 357
           +L    +GKL    E++P   F
Sbjct: 181 ILQHVADGKL----EVLPVTAF 198

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	378
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-122
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-112
3gms_A	340	Putative NADPH:quinone reductase; structural genom	3e-74
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-69
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-43
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-36
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-36
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-34
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-34
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-34
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-34
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	7e-34
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	8e-34
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	8e-34
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	9e-33
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-32
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-31
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	6e-31
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	9e-31
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-30
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-28
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-28
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-26
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-26
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-26
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	8e-26
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-24
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-24
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-24
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-23
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-22
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	4e-22
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	4e-22
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-22
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	9e-22
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-21
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-20
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-20
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	5e-20
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-20
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-19
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-19
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-19
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-16
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-15
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	9e-15
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-14
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	6e-14
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-13
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	4e-13
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	4e-13
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	9e-12
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-11
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-10
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	5e-10
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-09
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	7e-09
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	8e-09
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	4e-08
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-07
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-07
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-07
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	8e-07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-06
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-04

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  356 bits (915), Expect = e-122
 Identities = 151/348 (43%), Positives = 213/348 (61%), Gaps = 2/348 (0%)

Query: 31  RVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPS 90
            V       +   M    +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPS
Sbjct: 10  GVDLGTENLYFQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPS 69

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKD 150
           DIN I+G Y + P++PAVGG EGV +V +VGS VT L PGDWVIP+    GTW++  V  
Sbjct: 70  DINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFS 129

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIAR 210
           +    +V  D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA 
Sbjct: 130 EEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA 189

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270
             G+ +IN++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVG
Sbjct: 190 ALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVG 249

Query: 271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 330
           G S++++L+ L++GGTMVTYGGM+K+P+  S S  IFKDL L+GFWL +W       + +
Sbjct: 250 GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFK 309

Query: 331 NMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIK 377
            +I  L  L R G+L       VP  ++Q+AL  ++       KQ++ 
Sbjct: 310 ELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMK-PFISSKQILT 356

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  330 bits (849), Expect = e-112
 Identities = 125/362 (34%), Positives = 186/362 (51%), Gaps = 32/362 (8%)

Query: 48  SKAVVYEREGPPDSV--IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP-- 103
           ++AV+Y + G P  V   +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 104 -------KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                  +  A  G EG+ EV  VGS V+ L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183

Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLANLP 260
             QI +    +SI++IRDR   DE    LK LGA +V TE Q         +K  +    
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243

Query: 261 EPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319
             A L  NCVGG S++ + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ +
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303

Query: 320 WLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLH---GSQPKQVI 376
            L + K     + ++ ++    EGKL     +    +    L +            KQ+I
Sbjct: 304 LLKNNKE-LKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

Query: 377 KF 378
            +
Sbjct: 363 TY 364

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  232 bits (595), Expect = 3e-74
 Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 6/303 (1%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MS   K + + + G P  V+++       +K+N+V V+ML  PINPSD+  I G Y  R 
Sbjct: 1   MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRI 60

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM 163
            +P + GYEGVG V +VG+ V+R   G  V+P     GTWQ YV         +      
Sbjct: 61  PLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRG-EGTWQEYVKTSADFVVPIPDSIDD 119

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
             AA + +NPLTA     +   L   D ++ N   S +G    Q+++      I +    
Sbjct: 120 FTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAV---- 175

Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283
             +++  E+L  LGA  V   S   +      L N        + +GG   +++   L  
Sbjct: 176 TRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRP 235

Query: 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG 343
            G  +T G +S   +  +        +    F L+ W       + +    +L+ L    
Sbjct: 236 NGHFLTIGLLSGIQVNWAEIVT-KAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENE 294

Query: 344 KLK 346
           +L+
Sbjct: 295 QLR 297

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  220 bits (562), Expect = 3e-69
 Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 25/321 (7%)

Query: 44  MSPPS--KAVVYEREGPPDS-----------VIKMIELPPVEVKENDVCVKMLAAPINPS 90
           M+ PS  KA++   +G   +            ++   +       + V +K+  A INPS
Sbjct: 5   MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPS 64

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS-AVTRLAPGDWVI--PSPPSSGTWQSYV 147
           D+  I+G Y          G+EGVG + + G     +   G  V       + G+W  Y 
Sbjct: 65  DVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYA 124

Query: 148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207
           V + +    +      E  A +IVNPLTA+ M  D        + V     S + + II 
Sbjct: 125 VAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVKQEGEKAFVMTAGASQLCKLIIG 183

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGF 266
           +A+  G   I         DE    LK +GA  V  E   +    ++ ++     P +  
Sbjct: 184 LAKEEGFRPIVT----VRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQ-PRIFL 238

Query: 267 NCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV-STSAFIFKDLSLKGFWLQKWLSSEK 325
           + V G  AS +   + +    + YG +      +      IF+   ++GFWL +W+   K
Sbjct: 239 DAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFK 298

Query: 326 ATECRNMIDYLLCLAREGKLK 346
                 +++       +G+  
Sbjct: 299 ERRGPAILE-AQKRFSDGRWS 318

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  154 bits (391), Expect = 1e-43
 Identities = 59/349 (16%), Positives = 109/349 (31%), Gaps = 57/349 (16%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-- 101
           M    +     +       + +  +       ++V +++ A+P+NPSD+  + G   +  
Sbjct: 2   MHSALQLRSRIKSSGEL-ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMST 60

Query: 102 --------------------------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                                     R       G EG G V   GS+    A     + 
Sbjct: 61  AKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV- 119

Query: 136 SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195
           +      +  Y          + + +     A+  VNPLTAL M+E    L    ++V  
Sbjct: 120 AAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHT 178

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKG 254
            A S +GQ + QI    GI  +NI        E  + LK  GA  V    S   ++++  
Sbjct: 179 AAASNLGQMLNQICLKDGIKLVNI----VRKQEQADLLKAQGAVHVCNAASPTFMQDLTE 234

Query: 255 LLANLPEPALGFNCVGGNSASKVLKFL-----------------SQGGTMVTYGGMSKKP 297
            L +     + F+  GG      +                    +    +  YGG+   P
Sbjct: 235 ALVST-GATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSP 293

Query: 298 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
              + +        + G+ L  +L          +   ++    +    
Sbjct: 294 TEFNRN--FGMAWGMGGWLLFPFLQKIGRERANALKQRVVAEL-KTTFA 339

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  134 bits (340), Expect = 1e-36
 Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 23/306 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K + +   G P+ V++ ++  P       V V+  A  +N  D     G+YP  P +P+ 
Sbjct: 3   KRIQFSTVGGPE-VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSG 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G EG G V +VG  VTR   GD V       G +    V  ++   K++     E AA 
Sbjct: 61  LGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +++  LT   +L     +  G+ I+ + A   VG    Q A+  G   I        S E
Sbjct: 121 LMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGT----VSSPE 176

Query: 229 AKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
                K LGA E          +  LE+ + K          + ++ VG ++    L  +
Sbjct: 177 KAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC-------PVVYDGVGQDTWLTSLDSV 229

Query: 282 SQGGTMVTYGGMSKKPITVSTSAFIFKD-LSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340
           +  G +V++G  S     V+      KD + +    L  + ++ +    + M D L  + 
Sbjct: 230 APRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQ--NLQTMADELFDML 287

Query: 341 REGKLK 346
             GKLK
Sbjct: 288 ASGKLK 293

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  133 bits (338), Expect = 2e-36
 Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 23/306 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
             + + + G P+ V++ +E  P +  EN++ V+  A  IN  D     G+YP  P +P+ 
Sbjct: 3   TRIEFHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSG 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V  VGS V  +  GD V+ +  + G + S           +      E AA 
Sbjct: 61  LGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             +  LT   +L     +   +  + + A   VG    Q A+  G   I       G+ +
Sbjct: 121 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGT----VGTAQ 176

Query: 229 AKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             +     GA +V         E   E+   K +        + ++ VG ++  + L  L
Sbjct: 177 KAQSALKAGAWQVINYREEDLVERLKEITGGKKV-------RVVYDSVGRDTWERSLDCL 229

Query: 282 SQGGTMVTYGGMSKKPITVSTSAFIFKD-LSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340
            + G MV++G  S     V+      K  L +    LQ ++++ +  E     + L  L 
Sbjct: 230 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTRE--ELTEASNELFSLI 287

Query: 341 REGKLK 346
             G +K
Sbjct: 288 ASGVIK 293

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  130 bits (328), Expect = 1e-34
 Identities = 67/317 (21%), Positives = 123/317 (38%), Gaps = 30/317 (9%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G  +  +++      E ++ ++ +++ A  +N  D+   +G     PK P V
Sbjct: 5   RAVVLAGFGGLN-KLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G+E  G V ++G +V     GD V+        W   V       +K+  D     AA 
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVN-YNAWAEVVCTPVEFVYKIPDDMSFSEAAA 122

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             +N +TA  ML +   L  G S++ + A   VGQ + Q+       ++        S  
Sbjct: 123 FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFG----TASTF 178

Query: 229 AKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT 286
             E +K          +    EVK +     ++       +C+ G++  K L  L   GT
Sbjct: 179 KHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIV-----LDCLCGDNTGKGLSLLKPLGT 233

Query: 287 MVTYGGMS----------------KKPITVSTSAFIFKDLSLKGFWLQKWLSSE-KATEC 329
            + YG  +                 +   V+      ++  + GF L   L  + +A   
Sbjct: 234 YILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLI 293

Query: 330 RNMIDYLLCLAREGKLK 346
           R +++ L+ L  + K+K
Sbjct: 294 RGVVEKLIGLYNQKKIK 310

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  130 bits (328), Expect = 1e-34
 Identities = 81/326 (24%), Positives = 129/326 (39%), Gaps = 44/326 (13%)

Query: 44  MSPPS--KAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
           +   S  + +V  R  P   ++V    + P     + D+ V+     +N SDIN   G Y
Sbjct: 18  LYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRY 77

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVT-RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
               K P   G+EG+GEV ++G + + R   G  V    P  G++  Y V   S+   V 
Sbjct: 78  DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP--GSFAEYTVVPASIATPV- 134

Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             S      T++V+  TA   L++   L+ G  ++   A    GQ  +Q+++    H I 
Sbjct: 135 -PSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193

Query: 219 IIRDRAGSDEAKEKLKGLGADEVF---TESQLEVKNVKGLLANL-PEPALG----FNCVG 270
                  SDE    LK LG D      TE       V  +L    PE   G    +  VG
Sbjct: 194 T----CSSDEKSAFLKSLGCDRPINYKTE------PVGTVLKQEYPE---GVDVVYESVG 240

Query: 271 GNSASKVLKFLSQGGTMVTYGGMS---------KKPITVSTSAFIFKDLSLKGFWLQKWL 321
           G      +  L+  G ++  G +S                 +  + K  S++GF+L  +L
Sbjct: 241 GAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYL 300

Query: 322 SSEKATECRNMIDYLLCLAREGKLKY 347
           S  +A      + +LL +   G L  
Sbjct: 301 SKYQA-----AMSHLLEMCVSGDLVC 321

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  129 bits (326), Expect = 2e-34
 Identities = 72/329 (21%), Positives = 126/329 (38%), Gaps = 27/329 (8%)

Query: 28  GARRVQAQRVRAFSALMSPPS---KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLA 84
            +  V       +   M+      +AV     G P+ +    ++     K++ V +K+ A
Sbjct: 7   HSSGVDLGTENLYFQSMATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHA 66

Query: 85  APINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 144
             +NP +     G Y  +P +P   G +  G + +VG   +    GD V  S   SG + 
Sbjct: 67  CGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYA 126

Query: 145 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204
            Y +      +K+ +    +  A I +   TA R L     + +G+S++ +GA+  VG  
Sbjct: 127 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA 186

Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLA 257
             QIAR  G+  +      AG++E ++ +   GA EV       + +   +    KG   
Sbjct: 187 ACQIARAYGLKILGT----AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKG--- 239

Query: 258 NLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
                 +    +   + SK L  LS GG ++  G      I ++    + K+ S+ G  L
Sbjct: 240 ----IDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTL 293

Query: 318 QKWLSSEKATECRNMIDYLLCLAREGKLK 346
                 E           L      G LK
Sbjct: 294 FSSTKEEFQQ----YAAALQAGMEIGWLK 318

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  127 bits (322), Expect = 6e-34
 Identities = 81/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G P+ V+++ +LP  E    +V V++ AA +N  D+   +GV   +  +P V
Sbjct: 2   RAVVMRARGGPE-VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G +G G V +VG  V   APGD V+ +P                             GT
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YVV  ++      K+   E AA I +  LTA +M+ D   +  GD ++   A S V 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-------FTESQLEVKNVKGL 255
              IQIA+  G   I      AGS++   + K LGADE        + +    +   KG 
Sbjct: 181 VAAIQIAKLFGARVIAT----AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKG- 235

Query: 256 LANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
            A+        +  G      V+K  + GG +   G  S    T+  +   ++ LS+ G
Sbjct: 236 -ADKV-----VDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILG 288

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  126 bits (320), Expect = 7e-34
 Identities = 71/309 (22%), Positives = 122/309 (39%), Gaps = 39/309 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV----RPK 104
           KA+ +++ GPP  V+K+++ P  E ++N + +K+ AA +NP D     G   V    +  
Sbjct: 8   KAIQFDQFGPPK-VLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWV---IPSPPSSGTWQSYVVKDQSVWHKVSKDS 161
           +P+  GY+  GEV  +GS V  +  GD V      P     +  YV        +  +  
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
               AA++    LTAL+ L     +  GD ++ +     VG   IQ+A+ +G   I    
Sbjct: 127 SFLQAASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITT-- 183

Query: 222 DRAGSDEAKEKLKGLGADEVF---TESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKV 277
               S      LK LGA++      E  L           +  P     + VGG+   + 
Sbjct: 184 ---ASKRNHAFLKALGAEQCINYHEEDFLLA---------ISTPVDAVIDLVGGDVGIQS 231

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 337
           +  L + G +V+   ++   +         K     G   Q   + E+      ++    
Sbjct: 232 IDCLKETGCIVSVPTITAGRV---IEVAKQKHRRAFGLLKQF--NIEELHYLGKLVS--- 283

Query: 338 CLAREGKLK 346
               E KL+
Sbjct: 284 ----EDKLR 288

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  126 bits (319), Expect = 8e-34
 Identities = 44/305 (14%), Positives = 95/305 (31%), Gaps = 31/305 (10%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +             + +  +    +  +D+ V+  A  INP D   I+   P+      V
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKA-NPINWSNGHV 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            G +G G +  VG+ V     G  V    S    G++  + V +      +  +   E A
Sbjct: 62  PGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERA 121

Query: 167 ATIIVNPLTALRMLEDFTTLN--SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
           A +   P   L   + F  +       ++  G  + V   + Q+  + G           
Sbjct: 122 AAL---PCPLLTAWQAFEKIPLTKQREVLIVGFGA-VNNLLTQMLNNAGYVVDL-----V 172

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG 284
            +  ++      G   ++ E     +    +          F+ V   +A+ ++  L   
Sbjct: 173 SASLSQALAAKRGVRHLYREPSQVTQKYFAI----------FDAVNSQNAAALVPSLKAN 222

Query: 285 GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR--- 341
           G ++         I         + +S     L          + + ++     L     
Sbjct: 223 GHIICIQD----RIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIA 278

Query: 342 EGKLK 346
           +GK++
Sbjct: 279 QGKME 283

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  126 bits (320), Expect = 8e-34
 Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 27/316 (8%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP 100
              +    K ++ +  G  D VIK  + P   + E ++ +K     +N  +    +G+YP
Sbjct: 2   KCTIPEQQKVILIDEIGGYD-VIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP 60

Query: 101 VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH---KV 157
              + P V G E  G V + G  VT    GD V     S+    S +     V       
Sbjct: 61  C--EKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGT 118

Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
           S D  ++  A  ++  LTAL    +   +  GD ++   A   VG  + Q+ + +G H+I
Sbjct: 119 S-DEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTI 177

Query: 218 NIIRDRAGSDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVG 270
            +    A +DE  +  K  GA+ +            L+  N KG+          F+ VG
Sbjct: 178 AV----ASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV-------DASFDSVG 226

Query: 271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 330
            ++    L  L + G  V++G  S      S +    K+++L    L  +++  +  E +
Sbjct: 227 KDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPE--EWK 284

Query: 331 NMIDYLLCLAREGKLK 346
              D    L    KL 
Sbjct: 285 YYSDEFFGLVNSKKLN 300

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  125 bits (315), Expect = 9e-33
 Identities = 73/304 (24%), Positives = 112/304 (36%), Gaps = 42/304 (13%)

Query: 40  FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
           F ++MS   +    E   P    +K+ E P  E  E+D+ V+ LA  +N  D   +E   
Sbjct: 20  FQSMMSKWMQEWSTETVAP--HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM 77

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP---------------------- 137
            +    P V   +  G V +VG +VTR  PGD VI +                       
Sbjct: 78  GLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG 137

Query: 138 -PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 196
               G    YVV  +  +    K      A+T+    LTA   L +   L +GD +V  G
Sbjct: 138 GAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG 197

Query: 197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQLEVKNVKG 254
            T  V    +QIA+  G   I      + S E  ++   LGAD      E    V+ V  
Sbjct: 198 -TGGVALFGLQIAKATGAEVIVT----SSSREKLDRAFALGADHGINRLEEDW-VERVYA 251

Query: 255 LLANLPEPALG----FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 310
           L  +      G        GG    + LK ++  G +   G +    ++      + K  
Sbjct: 252 LTGD-----RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSP 306

Query: 311 SLKG 314
            ++G
Sbjct: 307 VVQG 310

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  123 bits (310), Expect = 2e-32
 Identities = 67/311 (21%), Positives = 110/311 (35%), Gaps = 27/311 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVP 106
            A V  ++G PD      E+         V ++  A  +N  D     G+    V  + P
Sbjct: 3   MAAVIHKKGGPD-NFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            V G+E    V  VG  VT    G+ V    P  G +    +       KV KD  ++  
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121

Query: 167 --ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
             A +++  +TA  +L     +  GD ++ + A   +G  ++  ARH G   I       
Sbjct: 122 HLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGT----V 177

Query: 225 GSDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
            ++E  E  + LG           F E   E+   KG+        + ++ +G ++  K 
Sbjct: 178 STEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGV-------DVVYDSIGKDTLQKS 230

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLK--GFWLQKWLSSEKATECRNMIDY 335
           L  L   G    YG  S     +     +    SL      L  ++S    +E       
Sbjct: 231 LDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMS--NRSEIDEGSKC 288

Query: 336 LLCLAREGKLK 346
           L    + G L 
Sbjct: 289 LFDAVKAGVLH 299

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  122 bits (307), Expect = 1e-31
 Identities = 68/337 (20%), Positives = 111/337 (32%), Gaps = 46/337 (13%)

Query: 41  SALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
              + PP   A+          V      P   +  + V V++ A  INPSD +      
Sbjct: 4   QPFIPPPQQTALTVNDHDEVT-VWNAAPCP--MLPRDQVYVRVEAVAINPSDTSMRGQF- 59

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQS 152
                  A  G +  G V +VGS VT +  GD V        P  P  G +  Y V    
Sbjct: 60  ---ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR 116

Query: 153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDF------------TTLNSGDSIVQNGATSI 200
           VW K+ K    E AA +     TA   ++               T +    ++  G ++ 
Sbjct: 117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTA 176

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQLEVKNVKGLLAN 258
                +Q+ R  G   I        S    +  K  GA+EVF      L  + ++    N
Sbjct: 177 TATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEVFDYRAPNL-AQTIRTYTKN 230

Query: 259 LPEPALGFNCVGG-NSASKVLKFLSQ-GGTMVTYGGMSKKPIT---VSTSAFIFKDLSLK 313
                   +C+    S +     + + GG  V+     +   T   V+T   +   +  +
Sbjct: 231 --NLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGE 288

Query: 314 GFWLQKWLSSEKATECR----NMIDYLLCLAREGKLK 346
           G           + E R    ++      L  +G+L 
Sbjct: 289 GSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLV 325

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  121 bits (305), Expect = 6e-31
 Identities = 53/347 (15%), Positives = 94/347 (27%), Gaps = 70/347 (20%)

Query: 30  RRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINP 89
              +A  V      M     A +  R+  P   I + ++P  E+   +  V ++A+ +N 
Sbjct: 29  ESYRAITVHKDETEM----FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNY 84

Query: 90  SDINRIEGVY----------------PVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDW 132
           + ++                        R  +P  V G +  G V   G  V     GD 
Sbjct: 85  NSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDE 144

Query: 133 VIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
           V+                              + G      +   +           E A
Sbjct: 145 VVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEA 204

Query: 167 ATIIVNPLTALRMLEDFTT--LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
           A   +   TA R L       +  GD+++  GA+  +G    Q A   G + I +     
Sbjct: 205 AAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICV----V 260

Query: 225 GSDEAKEKLKGLGADEVF--TESQLEVKNVKGLLANLPEPALG---------------FN 267
            S +  E  + +GA+ +             +           G               F 
Sbjct: 261 SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFE 320

Query: 268 CVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
             G  +    +    +GGT+ T    S                 + G
Sbjct: 321 HPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIG 367

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  119 bits (300), Expect = 9e-31
 Identities = 71/310 (22%), Positives = 119/310 (38%), Gaps = 18/310 (5%)

Query: 44  MSPPS--KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           MS P   + V  +  G PD V+ + + P     E +V V+  A  +N  DI + +G YP 
Sbjct: 23  MSLPQEMRFVDLKSFGGPD-VMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP 81

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS 161
                 + G E  GE+  VG  V+  A GD V     + G +  Y +          K  
Sbjct: 82  PKDASPILGLELSGEIVGVGPGVSGYAVGDKVC-GLANGGAYAEYCLLPAGQILPFPKGY 140

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
               AA +     T    L     L  G+S++ +G TS +G   IQ+AR  G        
Sbjct: 141 DAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYAT-- 198

Query: 222 DRAGSDEAKEKLKGLGADEVF---TESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKV 277
             AGS    E  + LGA       +E     +K   G   ++       + +G     + 
Sbjct: 199 --AGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDII-----LDMIGAAYFERN 251

Query: 278 LKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           +  L++ G +     +       V+ S  + K L++ G  ++   + EK     +++  +
Sbjct: 252 IASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEV 311

Query: 337 LCLAREGKLK 346
             L   G + 
Sbjct: 312 WPLLEAGTVA 321

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  118 bits (297), Expect = 2e-30
 Identities = 70/315 (22%), Positives = 113/315 (35%), Gaps = 31/315 (9%)

Query: 44  MSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV- 101
           ++ P+  A V E    P  V++ +  P  +     V V++ A+  NP D     G  P  
Sbjct: 3   LTTPTMIAAVVEEANGPF-VLRKLARP--QPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKV 157
           +  +PA+ G +  G V +VG  V     GD V           GT   +   D  +    
Sbjct: 60  QQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK 119

Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
                M  A+ + +  +TA   L D   +  G +++  G    VG   IQIA  RG    
Sbjct: 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVF 179

Query: 218 NIIRDRAGSDEAKEKLKGLGADEV-----FTESQLEVKNVKGLLANLPEPALGFNCVGGN 272
                        E ++ LGA  +       +   E    +G         L ++ +GG 
Sbjct: 180 A-----TARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGF-------DLVYDTLGGP 227

Query: 273 SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG-FWLQKWLSSEKATECRN 331
                   + + G +V+  G      T   +   FK  +  G F L   L++E       
Sbjct: 228 VLDASFSAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGE 283

Query: 332 MIDYLLCLAREGKLK 346
           M+     L + GKL 
Sbjct: 284 MLREADALVQTGKLA 298

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  114 bits (287), Expect = 2e-28
 Identities = 69/344 (20%), Positives = 108/344 (31%), Gaps = 72/344 (20%)

Query: 33  QAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI 92
            A  +RA  A M       V +++      +++ E+P  E+  ++V V ++A+ IN + +
Sbjct: 26  LALHLRAEDADM----FKGVADKDVR--KSLRLGEVPMPELAPDEVLVAVMASSINYNTV 79

Query: 93  NRIEGVY-----------------PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                                       +   V G +  G V   G  V R  PGD VI 
Sbjct: 80  WSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIV 139

Query: 136 SPPSS--------------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
            P                             G    Y V   S           E AA  
Sbjct: 140 HPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS 199

Query: 170 IVNPLTALRML--EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            +   TA RML  +    +  GD ++  GA+  +G   IQ  ++ G   + +      S 
Sbjct: 200 PLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAV----VSSA 255

Query: 228 EAKEKLKGLGADEV-----------FTESQLEVKNVKGLLANLPEPALG------FNCVG 270
           + +  ++ LG D V             +    V      LA L     G      F   G
Sbjct: 256 QKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG 315

Query: 271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
             +    +    +GGT+VT G  S    T        K   + G
Sbjct: 316 RVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVG 359

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  112 bits (283), Expect = 2e-28
 Identities = 65/313 (20%), Positives = 113/313 (36%), Gaps = 23/313 (7%)

Query: 39  AFSALMSPPS--KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
              A    P   KA+  +    P+  +   ++       N V V + AA +   D    +
Sbjct: 11  TLEAQTQGPGSMKAIQAQSLSGPE-GLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTK 69

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           G Y ++ + P V G E  G V S     + + PGD V+      G +   V    S    
Sbjct: 70  GEYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF-IGGYAERVAVAPSNILP 127

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
                    A  +I N  T          L +G++++  GA   +G   IQIA+  G   
Sbjct: 128 TPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKV 187

Query: 217 INIIRDRAGSDEAKEKLKGLGADEV------FTESQLEVKNVKGLLANLPEPALGFNCVG 270
           I +         A E +K +GAD V      + ++  E     G         +  + +G
Sbjct: 188 IAV----VNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAG-------VDMVVDPIG 236

Query: 271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 330
           G +    ++ L+  G ++  G  +    T+  +  + ++ SL G    ++L +       
Sbjct: 237 GPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYE 296

Query: 331 NMIDYLLCLAREG 343
                L  L  EG
Sbjct: 297 TQ-AGLEKLVAEG 308

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  112 bits (282), Expect = 3e-28
 Identities = 74/331 (22%), Positives = 119/331 (35%), Gaps = 44/331 (13%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPV------ 101
            A V ++ G  + +     +  P+    N+V VK+ AA +NP D+N   G          
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 102 --------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVVKDQ 151
                     + P   G +  G V   G  V    PGD  W    P   GT   +VV   
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN----SGDSIVQNGATSIVGQCIIQ 207
           +      K      AA++    LTA   +     LN    +G  ++  GA+  VG   IQ
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQLEVKNVKGLLANLPEPAL 264
           + +    H   +      S +A E ++ LGAD+V    +       +V+  L +L     
Sbjct: 203 VMKAWDAHVTAV-----CSQDASELVRKLGADDVIDYKSG------SVEEQLKSLKPFDF 251

Query: 265 GFNCVGGNSASKVLKFLSQ--GGTMVTYGGMSKKPIT-------VSTSAFIFKDLSLKGF 315
             + VGG++ +    FL +  G T VT        +        +  +       +LK F
Sbjct: 252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF 311

Query: 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
           W                +D +  L   GK++
Sbjct: 312 WKGVHYRWAFFMASGPCLDDIAELVDAGKIR 342

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  107 bits (270), Expect = 1e-26
 Identities = 70/310 (22%), Positives = 120/310 (38%), Gaps = 25/310 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            AV +++ G P+  + + E+      E +V +K+ A+ +N +D+ + +G Y   P    +
Sbjct: 24  LAVHFDKPGGPE-NLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82

Query: 109 GGYEGVGEVYSVGSAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167
            G E  G V  +G         GD  + +    G    YV   + +   + +   +  AA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAM-ALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAA 141

Query: 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G   +      AGS 
Sbjct: 142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT----AGSQ 197

Query: 228 EAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280
           +  +  + LGA          F+E+ L+     G   NL       +C+GG+   K +  
Sbjct: 198 KKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAG--VNLI-----LDCIGGSYWEKNVNC 250

Query: 281 LSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY---L 336
           L+  G  V YG M          S  +FK  SL    L+   +  K        +     
Sbjct: 251 LALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310

Query: 337 LCLAREGKLK 346
                  +L 
Sbjct: 311 FSTEGPQRLL 320

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  106 bits (268), Expect = 2e-26
 Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 31/284 (10%)

Query: 49  KAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           KA+ +E+        + K   L   E K +++ VK+ +  +NP D  +        P+V 
Sbjct: 4   KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKAPRVL 63

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQS-VWHKVSKDSPM 163
              G++ +G V SVG+ VT    GD V    SP  +G+   Y + ++  V     K+   
Sbjct: 64  ---GFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKA-PKNISA 119

Query: 164 EYAATIIVNPLTAL--------RM-LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214
           E A ++   PLT +           +      N G +++       VG    QIA+  G+
Sbjct: 120 EQAVSL---PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL 176

Query: 215 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 274
             I      A  +E  E  K +GAD V    +  +   K     +      F     +  
Sbjct: 177 RVITT----ASRNETIEWTKKMGADIVLNHKESLLNQFKTQ--GIELVDYVFCTFNTDMY 230

Query: 275 -SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
              +++ +   G + T             +A   K LS    ++
Sbjct: 231 YDDMIQLVKPRGHIATIVAF---ENDQDLNALKPKSLSFSHEFM 271

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  107 bits (268), Expect = 2e-26
 Identities = 74/300 (24%), Positives = 112/300 (37%), Gaps = 31/300 (10%)

Query: 34  AQRVRAFSALMSPPS-KAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPS 90
           +  V   +  +   S KAV Y +  P      +  IELP      +D+ V++ A  +NP 
Sbjct: 8   SSGVDLGTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPV 67

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVV 148
           D        P       V GY+  G V +VG  VT   PGD  +   S    GT   + +
Sbjct: 68  DYKVRRSTPPDGTD-WKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHL 126

Query: 149 KDQS-VWHKVSKDSPMEYAATIIVNPLTAL--------RMLEDFTTLNSGDSIVQNGATS 199
            D+  V  K       E AA     PLT++        R+  +     +  +I+  G   
Sbjct: 127 VDERIVGRKPKTLDWAEAAAL----PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAG 182

Query: 200 IVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258
            VG   +QIAR R  +  I      A   E +E +K LGA  V   S+     V  L   
Sbjct: 183 GVGSIAVQIARQRTDLTVI----ATASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL--G 236

Query: 259 LPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
           L  PA  F+    +  A+++   ++  G           P       F  K +S+    +
Sbjct: 237 LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD----PSAFDIMLFKRKAVSIHHELM 292

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  105 bits (265), Expect = 8e-26
 Identities = 66/367 (17%), Positives = 128/367 (34%), Gaps = 68/367 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV  E     +  I +  +   E   +D+ VK+ A  I  +D + + G +P  P  P  
Sbjct: 25  KAVRLE--SVGN--ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP--PVT 78

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  G V   GSAV  +APG  +   P                             G 
Sbjct: 79  LGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGG 138

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  YV+  +    ++       + A     PL      + +      + +G ++   G  
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGA--FCEPLACCLHGVDLSG----IKAGSTVAILGGG 192

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLA 257
            I G   +Q+AR  G  ++ I+  R      +   + +GA       +   V+ + G + 
Sbjct: 193 VI-GLLTVQLARLAGATTV-ILSTR--QATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248

Query: 258 NLPEPA-LGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKG 314
            +P    +   C G     K   +    GGT+V  G + +   + +     +F++L + G
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308

Query: 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELV----PFNNFQTALSKALGLHGS 370
            ++  +         R   D +      G ++ D  ++      +     +S        
Sbjct: 309 SFINPF-------VHRRAADLV----ATGAIEID-RMISRRISLDEAPDVISNP--AAAG 354

Query: 371 QPKQVIK 377
           + K ++ 
Sbjct: 355 EVKVLVI 361

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  101 bits (255), Expect = 2e-24
 Identities = 64/353 (18%), Positives = 120/353 (33%), Gaps = 59/353 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-------PV 101
           +AV     G P   ++ I +P  + K   V +K+ AA +  SD++  +G +        +
Sbjct: 2   RAVRLVEIGKP-LSLQEIGVP--KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------- 140
             K+P   G+E  G++  VG  V   + GD V  +P                        
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 141 -----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195
                G +  YV+     +    +      AA +  + +T  R +    +L+   +++  
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVV 177

Query: 196 GATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVK 253
           GA   +G   +QIA+   G   I +       +EA E  K  GAD V     Q  +  ++
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGV----DVREEAVEAAKRAGADYVINASMQDPLAEIR 233

Query: 254 GLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL 312
            +  +        +        S   K L++ G  V  G      +          ++  
Sbjct: 234 RITESKG-VDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG-ADLHYHAPLITLSEIQF 291

Query: 313 KG-FWLQKWLSSEKATECRNMIDYLLCLAREGKLK-YDMELVPFNNFQTALSK 363
            G             ++   ++     LA  GK+K    + +       A+  
Sbjct: 292 VGSLVGN-------QSDFLGIMR----LAEAGKVKPMITKTMKLEEANEAIDN 333

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  100 bits (252), Expect = 3e-24
 Identities = 72/354 (20%), Positives = 129/354 (36%), Gaps = 60/354 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K+VV +        +    +P ++  +++V VK+ ++ +  SD+ RI          P  
Sbjct: 2   KSVVND--TDGIVRVAESVIPEIK-HQDEVRVKIASSGLCGSDLPRIFKNGAHYY--PIT 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  G + +VGS V  L PGD V   P                             G 
Sbjct: 57  LGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGG 116

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  Y+V  +     +  D P+E  A   + P+T    A  + +         +++  GA 
Sbjct: 117 FAEYIVVKRKNVFALPTDMPIEDGA--FIEPITVGLHAFHLAQ----GCENKNVIIIGAG 170

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258
           +I G   IQ A   G  S+    D   S E     K  GA + F  S++    ++ +L  
Sbjct: 171 TI-GLLAIQCAVALGAKSV-TAIDI--SSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226

Query: 259 LPEPALGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAF---IFKDLSLKG 314
           L    L     G     +  ++       +    G   + + ++++ F   + K+L++ G
Sbjct: 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLA-LVGTLHQDLHLTSATFGKILRKELTVIG 285

Query: 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELV----PFNNFQTALSKA 364
            W+  + S     E       L     E KL  +  L+     F +F  A+   
Sbjct: 286 SWMN-YSSPWPGQEWETASRLL----TERKLSLE-PLIAHRGSFESFAQAVRDI 333

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  100 bits (251), Expect = 5e-24
 Identities = 73/366 (19%), Positives = 135/366 (36%), Gaps = 65/366 (17%)

Query: 38  RAFSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           + FS  +     KA        P   I+ ++ P +E    DV V++  A +  +D++ ++
Sbjct: 5   QDFSQSLGVERLKAARLHEYNKP-LRIEDVDYPRLE-GRFDVIVRIAGAGVCHTDLHLVQ 62

Query: 97  GVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-------------- 140
           G++   ++PK+P   G+E VG +  V   V  L  GD VI  P  +              
Sbjct: 63  GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMH 122

Query: 141 ------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRML 180
                       G +  ++        K+ KD   E      + PL         A++  
Sbjct: 123 CENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE--MAPLADAGITAYRAVKKA 180

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
               TL  G  +   G    +G   +Q+ +     ++ I  D    +E  +  + LGAD 
Sbjct: 181 AR--TLYPGAYVAIVGVGG-LGHIAVQLLKVMTPATV-IALDV--KEEKLKLAERLGADH 234

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVT--YGGMSKKP 297
           V    +  VK V  L        +  + VG  +        L + G ++   YGG     
Sbjct: 235 VVDARRDPVKQVMELTRGRG-VNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG----E 289

Query: 298 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNF 357
           +   T   I  ++S +G       +  +  E       L+ LA +GK++ ++++   +  
Sbjct: 290 LRFPTIRVISSEVSFEGSL---VGNYVELHE-------LVTLALQGKVRVEVDIHKLDEI 339

Query: 358 QTALSK 363
              L +
Sbjct: 340 NDVLER 345

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 96.4 bits (241), Expect = 7e-23
 Identities = 70/300 (23%), Positives = 112/300 (37%), Gaps = 33/300 (11%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +R G P  ++   +LP  E +E +V +++ A  +N +D     G Y  R   P +
Sbjct: 2   KAWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E VG V   G     L P           G     V   +     + +    E AA 
Sbjct: 59  PGMEVVGVV--EGRRYAALVPQ----------GGLAERVAVPKGALLPLPEGLSPEEAAA 106

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             V+ LTA   L+       G+ ++   A   +G   +Q+AR  G+  +      A   E
Sbjct: 107 FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA----ASRPE 161

Query: 229 AKEKLKGLGADEV--FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT 286
                  LGA+E   + E     K   GL   L         V G    + L  L+ GG 
Sbjct: 162 KLALPLALGAEEAATYAEVPERAKAWGGLDLVLE--------VRGKEVEESLGLLAHGGR 213

Query: 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK 346
           +V  G    +   +     + ++L++ GFWL       +       + +LL      +L+
Sbjct: 214 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL--LREGALVEEALGFLLPRL-GRELR 270

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 59/348 (16%), Positives = 126/348 (36%), Gaps = 55/348 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-PVRPKVPA 107
           KA + ++   P   + + ++   E +  +V +++  A +  +D+   +GV      ++P 
Sbjct: 5   KAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------G 141
           + G+E  G +  VG  + ++  GD V+                                G
Sbjct: 62  ILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG 120

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGAT 198
            +  Y++   S W           AA +     T   A+R    F +  +   ++ NG  
Sbjct: 121 GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIG 180

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLL 256
             +    IQI +    +   +   R  S + ++    LGAD V    +++  +  +   L
Sbjct: 181 G-LAVYTIQILKALMKNITIVGISR--SKKHRDFALELGADYVSEMKDAESLINKLTDGL 237

Query: 257 ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF 315
                 ++  + VG       + K L+Q G ++   GM  K +++        +  L G 
Sbjct: 238 G----ASIAIDLVGTEETTYNLGKLLAQEGAIILV-GMEGKRVSLEAFDTAVWNKKLLG- 291

Query: 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSK 363
                       +  +++     L+  GK+K  +  VP ++   A + 
Sbjct: 292 ----SNYGS-LNDLEDVVR----LSESGKIKPYIIKVPLDDINKAFTN 330

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 95.8 bits (239), Expect = 4e-22
 Identities = 66/383 (17%), Positives = 124/383 (32%), Gaps = 96/383 (25%)

Query: 43  LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           +M   + A+V E+   P  V K  E+  +      + V++L+A +  SD++   G  P R
Sbjct: 13  MMGLKAHAMVLEKFNQP-LVYKEFEISDI--PRGSILVEILSAGVCGSDVHMFRGEDP-R 68

Query: 103 PKVPAVGGYEGVGEVYSVGSAVT-----RLAPGDWVIPS--------------------- 136
             +P + G+EG G V  V           L PGD ++ +                     
Sbjct: 69  VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP 128

Query: 137 --------------PPSSGTWQSYVV--KDQSVWHKVSKDSPMEYAATI---IVNPLTAL 177
                         P   G + S++V   +  V  KVS+   ++  A           A 
Sbjct: 129 NRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVL-KVSEKDDLDVLAMAMCSGATAYHAF 187

Query: 178 RMLEDFTTLNSGDSIVQNGATSIV------GQCIIQIARHRGIHSINIIRDRAGSDEAKE 231
                       +     G T ++      G   + IAR  G  ++ I+         + 
Sbjct: 188 --------DEYPE--SFAGKTVVIQGAGPLGLFGVVIARSLGAENV-IVIAG---SPNRL 233

Query: 232 KL-KGLGADEVFTESQLEVKNVKGLLANLPEPA---LGFNCVGGNSASK-VLKFLSQGGT 286
           KL + +GAD      +  V+  +  + ++             G + A     + L +GG 
Sbjct: 234 KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 293

Query: 287 MVTYG-GMSKKPITVSTSAF-IFKDLSLKGFWLQKWLSSEKATECRNMID--YLLCLARE 342
               G  + + P+      + + K+ + KG W+             +       + +   
Sbjct: 294 YSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV------------SDTSHFVKTVSITSR 341

Query: 343 GKLKYDMELV----PFNNFQTAL 361
                  +L+    P      AL
Sbjct: 342 NYQLLS-KLITHRLPLKEANKAL 363

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 94.9 bits (237), Expect = 4e-22
 Identities = 64/350 (18%), Positives = 123/350 (35%), Gaps = 66/350 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K V++          K I +P  + K N++ + +  + +  +D++   G +P+  K+P V
Sbjct: 7   KGVIFYESHGK-LEYKDIPVP--KPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV----------------------IPSPPSS-----G 141
           GG+EG G V  +G  V     GD+                        P    S     G
Sbjct: 64  GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDG 123

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
           ++Q Y   D      + + + +   A     P+         AL+       L +G  + 
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVA-----PILCAGITVYKALKS----ANLMAGHWVA 174

Query: 194 QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKN 251
            +GA   +G   +Q A+  G   + I     G +  +E  + +G +    FT+ +  V  
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGI----DGGEGKEELFRSIGGEVFIDFTKEKDIVGA 230

Query: 252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 310
           V           +  N     +A     +++   GT V  G  +           + K +
Sbjct: 231 VLKATDGGAHGVI--NVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSI 288

Query: 311 SLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360
           S+ G          +A + R  +D+       G +K  +++V  +     
Sbjct: 289 SIVG-----SYVGNRA-DTREALDF----FARGLVKSPIKVVGLSTLPEI 328

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 94.6 bits (236), Expect = 7e-22
 Identities = 66/306 (21%), Positives = 116/306 (37%), Gaps = 51/306 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG--VYPVRPKVP 106
            A++  +   P    +++E+   +    +V +K+LA  I  +D++  E       R K P
Sbjct: 6   VAIMKTK---PGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSS 140
            + G+E  GEV  +G  V  +  GD+V                               + 
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 122

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGDSIVQN 195
           G +  Y V       K  K  P EYA   +  PL     T L          SG S++  
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYAT--LQEPLGNAVDTVLAGPI------SGKSVLIT 174

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           GA  + G   I +A+  G + + I+ +   SD  +E  K +GAD V    + +V      
Sbjct: 175 GAGPL-GLLGIAVAKASGAYPV-IVSEP--SDFRRELAKKVGADYVINPFEEDVVKEVMD 230

Query: 256 LANLPEPALGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAFI-FKDLSLK 313
           + +     +     G   A +  L+ ++  G +    G+    +T+  +  I FK L++ 
Sbjct: 231 ITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVS-LLGLYPGKVTIDFNNLIIFKALTIY 289

Query: 314 GFWLQK 319
           G   + 
Sbjct: 290 GITGRH 295

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 94.2 bits (235), Expect = 9e-22
 Identities = 65/354 (18%), Positives = 121/354 (34%), Gaps = 76/354 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P   I  + +P  +     V VK+ A+ +  +D++  +G +PV+P +P +
Sbjct: 4   KAAVVRAFGAP-LTIDEVPVP--QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD-----WVI-----------------PSPPSS-----G 141
            G+EGVG V +VGS V+R+  GD     W+                      ++     G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
            +  YVV D +    +         A     P+          L++    T    G  +V
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIA-----PILCAGVTVYKGLKV----TDTRPGQWVV 171

Query: 194 QNGATSIV-----GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 248
                 I      G   +Q AR  G+    +       D      + LGA+        +
Sbjct: 172 ------ISGIGGLGHVAVQYARAMGLRVAAV----DIDDAKLNLARRLGAEVAVNAR--D 219

Query: 249 VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIF 307
                 L   +              A S+ +  + +GGT+    G+            + 
Sbjct: 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIAL-NGLPPGDFGTPIFDVVL 278

Query: 308 KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTAL 361
           K ++++G      +   ++ + +  +D     A  G +K  +     ++     
Sbjct: 279 KGITIRG-----SIVGTRS-DLQESLD----FAAHGDVKATVSTAKLDDVNDVF 322

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 69/347 (19%), Positives = 108/347 (31%), Gaps = 53/347 (15%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP-KVPA 107
           KAV Y   G    V+  I  P       ++ +K+ AA +  SDI  ++         +P 
Sbjct: 2   KAVQYTEIGSE-PVVVDIPTP--TPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------- 140
             G+EGVG V  +G  VT    GD V    P                             
Sbjct: 59  TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118

Query: 141 ----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT-LNSGDSIVQN 195
               G+   Y++ D +       D     AA +    LT    +      L  G + V  
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVI 178

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           G    +G   IQI R      + I  D    D+     + +GAD            ++  
Sbjct: 179 GVGG-LGHVGIQILRAVSAARV-IAVDL--DDDRLALAREVGADAAVKSGAGAADAIRE- 233

Query: 256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
           L         F+ VG  S      + ++  G +    G+            I    S+  
Sbjct: 234 LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVV-GIHAGAHAKVGFFMIPFGASVVT 292

Query: 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTAL 361
            +   W +  +  E       ++ LAR G+L    E    +    A 
Sbjct: 293 PY---WGTRSELME-------VVALARAGRLDIHTETFTLDEGPAAY 329

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 66/309 (21%), Positives = 115/309 (37%), Gaps = 54/309 (17%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE--GVYPV 101
           M+  + + V       D  +++ + P  E KE++V ++M    I  SD++  E   +   
Sbjct: 1   MASDNLSAVLY--KQND--LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADF 56

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP--------------------- 135
             K P V G+E  G V  VG  V  L  GD V     +P                     
Sbjct: 57  IVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 116

Query: 136 -SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGD 190
            +PP  G    Y V      HK+  +  +E  A  ++ PL+    A R       +  G 
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGA--LLEPLSVGVHACRRAG----VQLGT 170

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL 247
           +++  GA  I G   +  A+  G   + +   R  S    E  K  GAD         + 
Sbjct: 171 TVLVIGAGPI-GLVSVLAAKAYGA-FV-VCTAR--SPRRLEVAKNCGADVTLVVDPAKEE 225

Query: 248 EVKNVKGLLANLPEPA-LGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVSTSAF 305
           E   ++ + + + +   +  +C G        +     GGT++   GM  + +TV     
Sbjct: 226 ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLM-LVGMGSQMVTVPLVNA 284

Query: 306 IFKDLSLKG 314
             +++ +K 
Sbjct: 285 CAREIDIKS 293

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 90.0 bits (224), Expect = 3e-20
 Identities = 72/313 (23%), Positives = 124/313 (39%), Gaps = 57/313 (18%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI-----NRI 95
           +A   P + ++V    GP D  +++   P  E   N+V ++M +  I  SD+      RI
Sbjct: 1   AAAAKPNNLSLVVH--GPGD--LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRI 56

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP--------------- 135
            G + V+   P V G+E  G V  VGS+V  L PGD V      P               
Sbjct: 57  -GNFIVKK--PMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLS 113

Query: 136 -------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFT 184
                  +PP  G    +   + +  +K+  +   E  A  ++ PL+    A R      
Sbjct: 114 PSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGA--LIEPLSVGIHACRRGG--- 168

Query: 185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244
            +  G  ++  GA  I G   + +A+  G   + ++ D   S     K K +GAD V   
Sbjct: 169 -VTLGHKVLVCGAGPI-GMVTLLVAKAMGAAQV-VVTDL--SATRLSKAKEIGADLVLQI 223

Query: 245 SQLEV-KNVKGLLANLPEPA-LGFNCVGGNSASK-VLKFLSQGGTMVTYGGMSKKPITVS 301
           S+    +  + +   L     +   C G  ++ +  +     GGT+V   G+  +  TV 
Sbjct: 224 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLV-LVGLGSEMTTVP 282

Query: 302 TSAFIFKDLSLKG 314
                 +++ +KG
Sbjct: 283 LLHAAIREVDIKG 295

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 62/320 (19%), Positives = 114/320 (35%), Gaps = 62/320 (19%)

Query: 41  SALMSPPSKAVVYE-----REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI--- 92
           ++  S  +  V                ++ ++    E+KE +V V + +  I  SD+   
Sbjct: 2   ASSASKTNIGVFTNPQHDLWISEASPSLESVQKGE-ELKEGEVTVAVRSTGICGSDVHFW 60

Query: 93  --NRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP---------- 135
               I G   V      V G+E  GEV +V  +V  +  GD V     +           
Sbjct: 61  KHGCI-GPMIVEC--DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTG 117

Query: 136 ------------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRM 179
                       +PP  G  + YV       HK+  +   E  A  ++ PL+     L+ 
Sbjct: 118 RYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIG-NMSYENGA--MLEPLSVALAGLQR 174

Query: 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 239
                 +  GD ++  GA  I G   +  A+  G   + +I D    +   +  K +  +
Sbjct: 175 AG----VRLGDPVLICGAGPI-GLITMLCAKAAGACPL-VITDI--DEGRLKFAKEICPE 226

Query: 240 EVF--TESQLEVKNVKGLLANL--PEPALGFNCVGGNSASK-VLKFLSQGGTMVTYGGMS 294
            V    E     ++ K ++ +    EPA+   C G  S+    +  +  GG +    G+ 
Sbjct: 227 VVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVF-VIGVG 285

Query: 295 KKPITVSTSAFIFKDLSLKG 314
           K  I +       +++ L+ 
Sbjct: 286 KNEIQIPFMRASVREVDLQF 305

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 90.6 bits (225), Expect = 6e-20
 Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 16/220 (7%)

Query: 25  EWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELP--PVEVKENDVCVKM 82
                R                  +     R G  D  + +++ P     + + +V + M
Sbjct: 188 GAHAPRLAGLGSDDVLPVPDGTGWRLEA-TRPGSLDG-LALVDEPTATAPLGDGEVRIAM 245

Query: 83  LAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
            AA +N  D     G+YP    +    G EG G V   G  VT LAPGD V+   P    
Sbjct: 246 RAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMIP--KA 299

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +    V D  +  ++        AA++ +  LTA   L D   L  G+S++ + A   VG
Sbjct: 300 FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVG 359

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              IQ+ARH G      +   A  D+  + +  L  + + 
Sbjct: 360 MAAIQLARHLGAE----VYATASEDK-WQAV-ELSREHLA 393

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 58/301 (19%), Positives = 98/301 (32%), Gaps = 52/301 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG--VYPVRPKVP 106
           +A+           + +++ P  E    ++ V++ AA I  +D++  +       R + P
Sbjct: 2   RALAKLAPEEG---LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSS 140
            V G+E  G V +VG  V R   GD V                                 
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGDSIVQN 195
           G +  YVV          KD P E AA  I+ P      T         +  SG S++  
Sbjct: 119 GGFAEYVVVPAENAWVNPKDLPFEVAA--ILEPFGNAVHTVYA-----GSGVSGKSVLIT 171

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           GA  I G     + R  G   I ++ D   +       +      V    +  ++ V+ +
Sbjct: 172 GAGPI-GLMAAMVVRASGAGPI-LVSDP--NPYRLAFARPYADRLVNPLEEDLLEVVRRV 227

Query: 256 LANLPEPALGFNCVGGNSASKV-LKFLSQGGTMVTYGGMSKKPITVS-TSAFIFKDLSLK 313
             +     +     G  +A    L  L  GG      G+   PI        + + ++  
Sbjct: 228 TGS--GVEVLLEFSGNEAAIHQGLMALIPGGEAR-ILGIPSDPIRFDLAGELVMRGITAF 284

Query: 314 G 314
           G
Sbjct: 285 G 285

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 87.6 bits (218), Expect = 2e-19
 Identities = 72/353 (20%), Positives = 123/353 (34%), Gaps = 76/353 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E+   P   IK +E P   +   +V V++ A  +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEQFKEP-LKIKEVEKP--TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV---------------------------IPSPPSSG 141
            G+EGVG V  VG  VT L  GD V                                  G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
            +  Y         K+  +   E AA     P+         AL++    T    G+ + 
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAA-----PIFCAGVTTYKALKV----TGAKPGEWVA 169

Query: 194 QNGATSIV-----GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 248
                 I      G   +Q A+  G++ + +       DE  E  K LGAD V    + +
Sbjct: 170 ------IYGIGGLGHVAVQYAKAMGLNVVAV----DIGDEKLELAKELGADLVVNPLKED 219

Query: 249 VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIF 307
               K +   +              A       + +GG  V   G+  + + +     + 
Sbjct: 220 A--AKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVL-VGLPPEEMPIPIFDTVL 276

Query: 308 KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360
             + + G      +   +  + +  + +    A EGK+K  +E+ P       
Sbjct: 277 NGIKIIG-----SIVGTRK-DLQEALQF----AAEGKVKTIIEVQPLEKINEV 319

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 43/388 (11%), Positives = 111/388 (28%), Gaps = 82/388 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPV----RP 103
           KA++ +   PP++ +++ ++          + ++ +   I  +D   + G   +    + 
Sbjct: 2   KAIIVK---PPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKG 58

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------------------------- 137
           K   V G+E +G V          + GD V+P                            
Sbjct: 59  KDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEA 115

Query: 138 ---PSSGTWQSYVVKDQSVWHKVSKDSPMEYA----ATIIVNPLTALRMLEDFTTLNSGD 190
                 G  + +   D     K+ K              I   +  +  ++    + + D
Sbjct: 116 GIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCD 175

Query: 191 SIVQNGATSIV------GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244
               N    +V      G     + R  G+    +   R  ++  +  ++    +   + 
Sbjct: 176 DGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVW-MANRREPTEVEQTVIEETKTNYYNSS 234

Query: 245 SQLEVKNVKGLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGMSKKPITV-- 300
           +  +      L  ++ +  +  +  G +      V+  L + G +  +G  +   + +  
Sbjct: 235 NGYDK-----LKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDY 289

Query: 301 -STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA--REGKLKYDMEL------ 351
            +    +  + ++ G                    +   +      K  Y          
Sbjct: 290 KTLQEIVHTNKTIIG------------LVNGQKPHFQQAVVHLASWKTLYPKAAKMLITK 337

Query: 352 -VPFNNFQTALSKALGLHGSQPKQVIKF 378
            V  N+ +  L         + K  I +
Sbjct: 338 TVSINDEKELLKVLREKEHGEIKIRILW 365

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 79.3 bits (196), Expect = 1e-16
 Identities = 54/318 (16%), Positives = 97/318 (30%), Gaps = 62/318 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG------VYPVR 102
            + V+     P+  ++ +  P +E K  ++ +K+ A  I  SD++  +       +YP  
Sbjct: 33  GSKVW---RYPEVRVEEVPEPRIE-KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGL 88

Query: 103 PKVPAVGGYEGVGEVYSVGSAVT------RLAPGDWVIPSP------------------- 137
              P   G+E  G V   G          R   G+ V                       
Sbjct: 89  TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCE 148

Query: 138 -------PSSGTWQSYVVKDQSVWHKV-------SKDSPMEYAATIIVNPLT-ALR-MLE 181
                     G +  YV  D      +         D      +  +V P + A   ++ 
Sbjct: 149 NLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS--LVEPTSVAYNAVIV 206

Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
               +  GD++V  G   I G   + I +H G   + I+ +   S+  +   K LGAD V
Sbjct: 207 RGGGIRPGDNVVILGGGPI-GLAAVAILKHAGASKV-ILSEP--SEVRRNLAKELGADHV 262

Query: 242 FTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-----SKVLKFLSQGGTMVTYGGMSKK 296
              ++           N     L     G          +V+         V     +  
Sbjct: 263 IDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA 322

Query: 297 PITVSTSAFIFKDLSLKG 314
            I ++   F  +   + G
Sbjct: 323 KIPLTGEVFQVRRAQIVG 340

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 62/383 (16%), Positives = 117/383 (30%), Gaps = 83/383 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
           KA+  +  G       +IE P  E +  +  V+ L   +  +D   I G +   P+    
Sbjct: 2   KAIAVK-RGEDR--PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWV--IPSPPSS------------------------ 140
            V G+E VG V  V    T L  GD V      P +                        
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 141 -----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDF--TTLNSG 189
                G    +    +    ++   S  E     ++ P++    AL              
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRI-PRSQAELGF--LIEPISITEKALEHAYASRSAFDWDP 173

Query: 190 DSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247
            S    G  S+ G   + + +   +G  ++  +  R   D   + ++ L A  V +    
Sbjct: 174 SSAFVLGNGSL-GLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQT- 231

Query: 248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAF- 305
               V+ +     +    +   G      + ++ L+  G     G  S     V   AF 
Sbjct: 232 ---PVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFH 288

Query: 306 ---IFKDLSLKGFWLQKWLSSEKATECRNMIDY---LLCLAREGKLKYDMELV----PFN 355
              +  + +L G            +   ++  +    +   +  K   + +LV    P +
Sbjct: 289 REMVLHNKALVG------------SVNSHVEHFEAATVTFTKLPKWFLE-DLVTGVHPLS 335

Query: 356 NFQTALSKALGLHGSQPKQVIKF 378
            F+ A         +  K  I+F
Sbjct: 336 EFEAAFDDD----DTTIKTAIEF 354

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 73.3 bits (181), Expect = 9e-15
 Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 45/311 (14%)

Query: 56  EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGV 114
           +G P  S  ++  +    +K  +V ++ L   ++P      +    ++     +G    V
Sbjct: 18  QGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK---RLKEGAVMMGQ--QV 72

Query: 115 GEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK----DSPMEYAATII 170
             V  V S  +    G  V+    +   W ++ + D     K+        P+  A   I
Sbjct: 73  ARV--VESKNSAFPAGSIVL----AQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTI 126

Query: 171 VNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
             P LTA   L +   +  G++++ + A   VG  + QIA+ +G   +      AGSDE 
Sbjct: 127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA----AGSDEK 182

Query: 230 KEKLKGLGADEVF---TESQLEVKNVKGLLANLPEPALGFNC----VGGNSASKVLKFLS 282
              LK +G D  F   T + LE    + L    P+   G++C    VGG   + VL  + 
Sbjct: 183 IAYLKQIGFDAAFNYKTVNSLE----EALKKASPD---GYDCYFDNVGGEFLNTVLSQMK 235

Query: 283 QGGTMV------TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
             G +        Y  M + P   S  + I+K L ++GF + +W    +    R+++ ++
Sbjct: 236 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 295

Query: 337 LCLAREGKLKY 347
                EGK++Y
Sbjct: 296 ----LEGKIQY 302

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 71.8 bits (177), Expect = 4e-14
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P    I+ IE+ PP   K ++V +K++A  +  +D   + G  P     P +
Sbjct: 10  AVAWEAGKPL--SIEEIEVAPP---KAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+ G G V SVG  VT+L  GD VIP 
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPL 91

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 71.4 bits (176), Expect = 6e-14
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV   +       ++ +++     + ++V VK++A  +  +D+   +  YPV    PAV 
Sbjct: 10  AVTPCKGADF--ELQALKIRQP--QGDEVLVKVVATGMCHTDLIVRDQKYPVPL--PAVL 63

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
           G+EG G + ++G  VT L  GD V+ S    G 
Sbjct: 64  GHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGK 96

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 74/340 (21%), Positives = 119/340 (35%), Gaps = 63/340 (18%)

Query: 44  MSPPSKAVVYER--EGPP---DSVIKMIELP-PVEVKENDVCVKMLAAPINP------SD 91
           M+  +K V+ +    G P   D       +   V    N V VK L    +P        
Sbjct: 1   MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGK 60

Query: 92  INRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVK 149
            +           P  P  G   GV  +  + S       GD +         W+ Y V 
Sbjct: 61  PDPSTAALAQAYTPGQPIQGY--GVSRI--IESGHPDYKKGDLLW----GIVAWEEYSVI 112

Query: 150 DQSVWHKVSKDS---PMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205
                          P+ Y   ++  P +TA     +  +   G+++  + A+  VGQ +
Sbjct: 113 TPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLV 172

Query: 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVF---TESQLEVKNVKGLLANLPE 261
            Q+A+  G + +      AGS E  + LK   G D+ F    ES L       L    P 
Sbjct: 173 GQLAKMMGCYVVGS----AGSKEKVDLLKTKFGFDDAFNYKEESDLT----AALKRCFPN 224

Query: 262 PALGFNC----VGGNSASKVLKFLSQGGTMVTYGGMS----KKPITVST-SAFIFKDLSL 312
              G +     VGG     VL  ++  G +   G +S    +    V   S  I+K   +
Sbjct: 225 ---GIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRI 281

Query: 313 KGF----WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348
           +GF    +  K+    K  E   ++ ++    REGK+ Y 
Sbjct: 282 QGFVVSDFYDKY---SKFLE--FVLPHI----REGKITYV 312

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           A+ ++   P    I+ IE+ PP   K  +V ++++A  + P+DIN  +         P V
Sbjct: 12  AIAWKTGSPL--CIEEIEVSPP---KACEVRIQVIATCVCPTDINATDPKKK--ALFPVV 64

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E  G V SVG  VT   PGD VIP 
Sbjct: 65  LGHECAGIVESVGPGVTNFKPGDKVIPF 92

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 70.3 bits (172), Expect = 4e-13
 Identities = 44/263 (16%), Positives = 80/263 (30%), Gaps = 23/263 (8%)

Query: 37   VRAFSALMSPPSKAVVYEREGPPD-SVIKMIELP---PVEVKENDVCVKMLAAPINPSDI 92
                       ++          D S I+ +  P    +     D    +    +N  D+
Sbjct: 1517 FPLEQDRPEKQTEHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDV 1576

Query: 93   NRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQS 152
                G         ++ G     +         R A G  V+   P+ G   + V+  Q 
Sbjct: 1577 MLATGKLSPD----SIPGKWLTRDCMLGMEFSGRDASGRRVMGMVPAEGL-ATSVLLLQH 1631

Query: 153  VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR 212
               +V     +E AA++ +   TA   L     +  G+S++ +  +  VGQ  I IA  R
Sbjct: 1632 ATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSR 1691

Query: 213  GIHSINIIRDRAGSDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALG 265
            G      +         + +   L            F +  L     KG+        L 
Sbjct: 1692 GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGV-------DLV 1744

Query: 266  FNCVGGNSASKVLKFLSQGGTMV 288
             N +        ++ L+Q G  +
Sbjct: 1745 LNSLAEEKLQASVRCLAQHGRFL 1767

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P    ++ I + PP   K ++V +K+LA+ I  SD + ++ + P   K P +
Sbjct: 13  AVAWEPHKPL--SLETITVAPP---KAHEVRIKILASGICGSDSSVLKEIIP--SKFPVI 65

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E VG V S+G+ VT + PGD VIP 
Sbjct: 66  LGHEAVGVVESIGAGVTCVKPGDKVIPL 93

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 64.9 bits (159), Expect = 9e-12
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV++E + P    I+ +E+ PP   K ++V +KM+A  I  SD + + G       +P +
Sbjct: 12  AVLWEEKKPF--SIEEVEVAPP---KAHEVRIKMVATGICRSDDHVVSGTLV--TPLPVI 64

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E  G V S+G  VT + PGD VIP 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPL 92

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P   VI+ IE+  P     N++ +K++A  +  +D+  +          P V
Sbjct: 12  AVAWEANKPL--VIEEIEVDVP---HANEIRIKIIATGVCHTDLYHLFEGKHKDG-FPVV 65

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+EG G V SVG  VT   PG+ VIP 
Sbjct: 66  LGHEGAGIVESVGPGVTEFQPGEKVIPL 93

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVRPKVPA 107
           K             +  IE         D  V+ LA     SDI+ + EG    R     
Sbjct: 2   KGFAML--SIGK--VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERH--NM 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGT 142
           + G+E VGEV  VGS V    PGD V+ P+      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWR 91

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 54/273 (19%), Positives = 98/273 (35%), Gaps = 51/273 (18%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MS   +A+  E+     SV  +  +   ++ ++ V +K+  + IN  D    +    +  
Sbjct: 1   MSTLFQALQAEKNADDVSV-HVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR 59

Query: 104 KVPAVGGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPP 138
           + P + G +  G V       ++ G  V                    + PGDW++P P 
Sbjct: 60  EYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASV-PGDWLVPLPQ 118

Query: 139 SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198
           +    ++ V                    T       ++  LE         S++  GAT
Sbjct: 119 NLSLKEAMVY------------------GTAGFTAALSVHRLEQNGLSPEKGSVLVTGAT 160

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258
             VG   + +   RG   +       G+ EA + LK LGA EV +   +    +K L   
Sbjct: 161 GGVGGIAVSMLNKRGYDVVAST----GNREAADYLKQLGASEVISREDVYDGTLKALSK- 215

Query: 259 LPEPALGFNCVGGNSASKVLKFLSQGGTMVTYG 291
             +     + VGG   + +L  +  GG++   G
Sbjct: 216 -QQWQGAVDPVGGKQLASLLSKIQYGGSVAVSG 247

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 48/268 (17%), Positives = 88/268 (32%), Gaps = 51/268 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V  +     +   +  +   ++ E DV V++  + +N  D         +    P V
Sbjct: 5   QAFVVNKTETEFTA-GVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 109 GGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPPSSGTW 143
            G +  G V       +  G  V                   RL  G+W++P P      
Sbjct: 64  PGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARL-HGEWLVPLPKGLTLK 122

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203
           ++  +                + A + ++       LE+         ++  GAT  VG 
Sbjct: 123 EAMAIGTAG------------FTAALSIH------RLEEHGLTPERGPVLVTGATGGVGS 164

Query: 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA 263
             + +   RG           G     + L+ LGA EV     +  + ++ L       A
Sbjct: 165 LAVSMLAKRGYTVEAST----GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDK--QRWA 218

Query: 264 LGFNCVGGNSASKVLKFLSQGGTMVTYG 291
              + VGG + + VL  +  GG +   G
Sbjct: 219 AAVDPVGGRTLATVLSRMRYGGAVAVSG 246

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 56.1 bits (136), Expect = 7e-09
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 49  KAVVYEREGPPDSVIK-----MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           + VVY   G     ++      ++ P  +  E+ V +K+++  I  SD + + G    + 
Sbjct: 4   RGVVYL--GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV 61

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
               V G+E  GEV   G  V  L  GD V 
Sbjct: 62  --GLVLGHEITGEVIEKGRDVENLQIGDLVS 90

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 73/348 (20%), Positives = 127/348 (36%), Gaps = 70/348 (20%)

Query: 41  SALMSPPSKAVVY----EREGPP-DSVIKMIELP-PVEVKENDVCVKMLAAPINP----- 89
           +A  +   + VV      + G P     +M E+  P  + E  V V+ L   ++P     
Sbjct: 2   AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCR 61

Query: 90  -SDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVV 148
            ++    + + P +      GG  G+G +    S  T L  GD+V         WQ+ V+
Sbjct: 62  MNEDTGTDYITPWQLSQVVDGG--GIGII--EESKHTNLTKGDFVTSF---YWPWQTKVI 114

Query: 149 KDQSVWHKVSK---DSPMEYAATIIVNP-LTALRMLEDFTTLNSGDS--IVQNGATSIVG 202
            D +   KV     D  + Y    I  P LT+L  +++   + +G +  +V +GA    G
Sbjct: 115 LDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACG 174

Query: 203 QCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKG-LGADEVF---TESQLEVKNVKGLLA 257
               QI    G    + I     G+ E    L   LG D       +      NV   L 
Sbjct: 175 SVAGQIGHFLGCSRVVGI----CGTHEKCILLTSELGFDAAINYKKD------NVAEQLR 224

Query: 258 NL-PEPALGFNC----VGGNSASKVLKFLSQGGTMVTYGGMS----KKPITVST-----S 303
              P    G +     VGGN +  V+  +++   ++  G +S      P          +
Sbjct: 225 ESCPA---GVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEA 281

Query: 304 AFIFKDLSLKGF----WLQKWLSSEKATECRNMIDYLLCLAREGKLKY 347
               ++++ + F    +  K+   E       +  +     +EGKLK 
Sbjct: 282 IQKERNITRERFLVLNYKDKF---EPGIL--QLSQWF----KEGKLKI 320

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELP----PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           K+VVY   G  D  ++ +  P         E+ V +K+++  I  SD +   G + V   
Sbjct: 4   KSVVYH--GTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK- 60

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
              V G+E  GEV   GS V  +  GD V 
Sbjct: 61  -GHVLGHEITGEVVEKGSDVELMDIGDLVS 89

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 48/270 (17%), Positives = 87/270 (32%), Gaps = 57/270 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A++ E++        +  L   ++   DV V +  + +N  D   I G   +    P +
Sbjct: 2   QALILEQQDGKTLA-SVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMI 60

Query: 109 GGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPPSSGTW 143
            G +  G V       +  G  V                   R+  GDW++  P    + 
Sbjct: 61  PGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARV-KGDWLVALPAGLSSR 119

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203
            + ++                   T     +  +  LED         +V  GA+  VG 
Sbjct: 120 NAMII------------------GTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGS 161

Query: 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN--VKGLLANLPE 261
             + +    G     +     G +     LK LGA+ + +  +        K L A    
Sbjct: 162 TAVALLHKLGYQVAAVS----GRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAG--- 214

Query: 262 PALGFNCVGGNSASKVLKFLSQGGTMVTYG 291
                + VG    +KVL  ++ GG +   G
Sbjct: 215 ---AIDTVGDKVLAKVLAQMNYGGCVAACG 241

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-----V 98
           M    K   +    P   ++        E    DV ++++   I  +D+++ +       
Sbjct: 4   MEAERKTTGWAARDP-SGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSN 62

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
           YP+      V G+E VGEV  VGS V++   GD V
Sbjct: 63  YPM------VPGHEVVGEVVEVGSDVSKFTVGDIV 91

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVY 118
               ++ +++   E   NDV +++    +  SD++++   +      P V G+E VG V 
Sbjct: 31  AKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVGRVV 89

Query: 119 SVGSAVTRLAPGDWV 133
           +VG  V + APGD V
Sbjct: 90  AVGDQVEKYAPGDLV 104

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVY 118
            D   K  +     V   DV + +L A I  SDI+     +      P + G+E  G + 
Sbjct: 13  KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIY-PMIPGHEIAGIIK 71

Query: 119 SVGSAVTRLAPGDWV 133
            VG  V +   GD V
Sbjct: 72  EVGKGVKKFKIGDVV 86

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINII 220
              AAT  V  LTA   L +   L+ G+ ++ + AT  VG   + IA+  G  I++    
Sbjct: 13  DNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTT--- 69

Query: 221 RDRAGSDEAKEKLKGLGADEVF 242
              AGSD  +E L  LG + V 
Sbjct: 70  ---AGSDAKREMLSRLGVEYVG 88

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-----VYPVRPKVPAVGGYEG 113
               +           E DV  K+L   +  SD++ I+      +YP+   VP   G+E 
Sbjct: 25  QSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL---VP---GHEI 78

Query: 114 VGEVYSVGSAVTRLAPGDWV 133
           VGEV  VGS V ++  GD V
Sbjct: 79  VGEVTEVGSKVKKVNVGDKV 98

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 5e-06
 Identities = 66/379 (17%), Positives = 103/379 (27%), Gaps = 130/379 (34%)

Query: 30  RRVQAQRVRAF---------SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCV 80
              Q + V+ F           LMSP    +  E+  P       IE    +   ND   
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSP----IKTEQRQPSMMTRMYIE--QRDRLYNDN-- 123

Query: 81  KMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPS 139
                     +++R++    +R                    A+  L P   V I     
Sbjct: 124 ----QVFAKYNVSRLQPYLKLR-------------------QALLELRPAKNVLIDGVLG 160

Query: 140 SG-TW-QSYVVKDQSV---------WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS 188
           SG TW    V     V         W  +   +          +P T L ML+       
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN----------SPETVLEMLQKLLYQ-- 208

Query: 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL- 247
              I  N  +             R  HS NI          + +L+ L   + +    L 
Sbjct: 209 ---IDPNWTS-------------RSDHSSNIKLR---IHSIQAELRRLLKSKPYENCLLV 249

Query: 248 --EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF 305
              V+N K         A   +C       K+L        + T      K +T   SA 
Sbjct: 250 LLNVQNAKAW------NAFNLSC-------KIL--------LTT----RFKQVTDFLSAA 284

Query: 306 IFKDLSL----KGF-------WLQKWLSSEKATECRNM--IDYLLC-----LAREGKLKY 347
               +SL               L K+L        R +   +           R+G   +
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 348 D-MELVPFNNFQTALSKAL 365
           D  + V  +   T +  +L
Sbjct: 345 DNWKHVNCDKLTTIIESSL 363

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 13/97 (13%)

Query: 44  MSPPSKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG----- 97
           MS P K      +        K  +  P    ++D+ +K+ A  +  SDI+   G     
Sbjct: 1   MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM 60

Query: 98  VYPVRPKVPAVGGYEGVGEVYSVGSAV-TRLAPGDWV 133
             P+   V    G+E VG+V  +G    + L  G  V
Sbjct: 61  KMPL---VV---GHEIVGKVVKLGPKSNSGLKVGQRV 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	378
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.92
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.99
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.96
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.75
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.73
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.72
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.47
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.45
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.25
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.14
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.98
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.96
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.83
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.83
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.82
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.78
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.78
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.75
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.73
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.73
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.72
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.7
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.69
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.69
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.68
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.68
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.68
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.67
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.65
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.61
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.61
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.61
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.61
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.61
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.59
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.59
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.58
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.57
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.57
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.56
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.55
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.55
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.55
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.54
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.54
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.54
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.54
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.53
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.53
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.52
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.52
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.51
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.51
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.51
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.51
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.49
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.48
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.48
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.47
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.46
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.46
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.45
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.44
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.44
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.44
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.43
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.43
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.43
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.43
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.42
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.42
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.42
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.41
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.41
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.41
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.41
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.4
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.39
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.39
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.37
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.37
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.37
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.37
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.36
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.36
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.36
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.36
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.35
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.35
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.34
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.34
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.33
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.33
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.33
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.32
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.31
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.31
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.3
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.3
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.3
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.3
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.28
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.28
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.27
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.27
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.27
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.27
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.26
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.26
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.26
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.26
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.26
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.25
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.25
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.25
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.25
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.25
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.24
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.24
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.24
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.23
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.23
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.22
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.22
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.22
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.21
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.21
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.2
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.2
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.2
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.19
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.19
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.18
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.18
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.18
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.18
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.17
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.16
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.16
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.16
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.16
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.15
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.15
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.15
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.15
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.14
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.14
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.14
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.13
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.13
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.13
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.12
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.12
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.12
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.11
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.11
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.11
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.11
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.11
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.11
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.1
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.1
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.1
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.1
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.1
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.08
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.08
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.08
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.07
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.07
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.07
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.06
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.06
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.05
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.05
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.05
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.05
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.04
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.04
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.04
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.04
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.04
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.04
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.03
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.01
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.01
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.01
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.01
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.01
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.01
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.99
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.98
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.95
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.94
1spx_A	278	Short-chain reductase family member (5L265); paral	96.93
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.92
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.9
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.89
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.89
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.88
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.87
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.86
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.86
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.85
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.84
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.84
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.83
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.82
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.82
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.81
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.81
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.81
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.81
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.81
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.8
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.79
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.79
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.79
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.78
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.77
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.76
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.75
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.75
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.74
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.74
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.74
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.73
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.72
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.72
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.71
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.71
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.7
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.7
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.7
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.7
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.7
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.7
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.69
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.69
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.68
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.67
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.67
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.66
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.66
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.65
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.64
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.64
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.64
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.64
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.64
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.64
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.64
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.63
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.63
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.63
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.62
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.61
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.61
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.58
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.58
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.55
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.55
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.54
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.53
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.52
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.52
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.52
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.51
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.5
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.5
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.47
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.46
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.45
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.45
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.45
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.44
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.41
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.38
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.35
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.33
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.33
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.33
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.32
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.31
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.29
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.29
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.27
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.26
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.26
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.26
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.25
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	96.25
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.23
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.21
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.18
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.18
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.16
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.14
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.13
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	96.13
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.11
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.1
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.1
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.08
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.08
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.07
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.02
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.01
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	96.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	95.99
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.98
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.98
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.98
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.95
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.94
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.93
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.91
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.9
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.89
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	95.89
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.89
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.88
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.87
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.85
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	95.81
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.81
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.8
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.78
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.72
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.69
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.69
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.69
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.68
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.67
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.67
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.66
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.65
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.64
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.64
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.63
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.63
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.62
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	95.61
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	95.6
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.59
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	95.58
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.58
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.57
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.51
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	95.51
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.49
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.48
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.43
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.42
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.39
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	95.38
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.37
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.37
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	95.34
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.33
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.33
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.32
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.31
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	95.31
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	95.28
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.26
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.25
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.22
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.2
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.2
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.18
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.18
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.12
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	95.08
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.06
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.04
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.03
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.03
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.0
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	94.98
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	94.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.95
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.94
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	94.93
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	94.93
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	94.92
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	94.9
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	94.89
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	94.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	94.83
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	94.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	94.8
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.8
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.78
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.75
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	94.75
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	94.74
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	94.72
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.69
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	94.68
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.67
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.53

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=5.9e-58  Score=430.38  Aligned_cols=335  Identities=45%  Similarity=0.775  Sum_probs=291.0

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .||.+||++++..++.+.+.+++++.|.|.++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            47788999999999876445888999999999999999999999999999999997765445799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G  202 (378)
                      +|++|++||||++.....|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|++|
T Consensus       102 ~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG  181 (357)
T 1zsy_A          102 NVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVG  181 (357)
T ss_dssp             TCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHH
T ss_pred             CCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHH
Confidence            99999999999998655699999999999999999999999999999999999999998878999999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      ++++|+||++|++++++++..+..+++.++++++|+++++++++.+.+.+.+.+.+.+++|+||||+|++....++++++
T Consensus       182 ~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~  261 (357)
T 1zsy_A          182 QAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLA  261 (357)
T ss_dssp             HHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhC
Confidence            99999999999999999865434456788999999999998765333455566655434999999999988888999999


Q ss_pred             cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTAL  361 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~  361 (378)
                      ++|+++.+|.....+..++...++.+++++.|++...+.....+....+.++++++++++|++++.+ ++|+|+++++||
T Consensus       262 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~  341 (357)
T 1zsy_A          262 RGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSAL  341 (357)
T ss_dssp             TTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHH
T ss_pred             CCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHH
Confidence            9999999986555455667777888999999988765533333455677889999999999999875 789999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      +.+.+++..| |+||++
T Consensus       342 ~~~~~~~~~g-Kvvl~~  357 (357)
T 1zsy_A          342 EASMKPFISS-KQILTM  357 (357)
T ss_dssp             HHHTSSSCSS-EEEEEC
T ss_pred             HHHHhCCCCC-cEEEeC
Confidence            9999998888 999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.1e-56  Score=421.04  Aligned_cols=329  Identities=21%  Similarity=0.232  Sum_probs=292.2

Q ss_pred             cccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        41 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      +..+|.+||++++..++.+.. +++++.|.|+++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++
T Consensus        22 ~~~~p~~MkA~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~v  100 (353)
T 4dup_A           22 SMSLPQEMRFVDLKSFGGPDV-MVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGV  100 (353)
T ss_dssp             -CCCCSSEEEEEESSSSSGGG-EEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEE
T ss_pred             cCCCChheeEEEEccCCCccc-eEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEE
Confidence            345889999999999887755 8999999999999999999999999999999999988766567999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch
Q 017064          121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~  200 (378)
                      |++|++|++||||++... .|+|+||+++|+++++++|+++++++||+++.+++|||+++.+.+++++|++|||+|++|+
T Consensus       101 G~~v~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~  179 (353)
T 4dup_A          101 GPGVSGYAVGDKVCGLAN-GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSG  179 (353)
T ss_dssp             CTTCCSCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCCCCEEEEecC-CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCH
Confidence            999999999999998765 5999999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (378)
Q Consensus       201 ~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~  279 (378)
                      +|++++|+|++.|++|++++    .++++.+.++++|+++++++++.+ .+.+++.+ +.+ +|++|||+|++.+..+++
T Consensus       180 iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g-~Dvvid~~g~~~~~~~~~  253 (353)
T 4dup_A          180 IGTTAIQLARAFGAEVYATA----GSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQG-VDIILDMIGAAYFERNIA  253 (353)
T ss_dssp             HHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSC-EEEEEESCCGGGHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCC-ceEEEECCCHHHHHHHHH
Confidence            99999999999999999988    478899999999999999987765 45677777 444 999999999999999999


Q ss_pred             hcccCCEEEEEecCCCCCcc-ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccH
Q 017064          280 FLSQGGTMVTYGGMSKKPIT-VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNF  357 (378)
Q Consensus       280 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~  357 (378)
                      +++++|+++.+|........ ++...++.+++++.|+....+.....+....+.++++++++++|++++.+ ++|+|+++
T Consensus       254 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  333 (353)
T 4dup_A          254 SLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDV  333 (353)
T ss_dssp             TEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGH
T ss_pred             HhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHH
Confidence            99999999999976554444 67778888999999998765432223344555688999999999999875 68999999


Q ss_pred             HHHHHHHHccCCCCCceEeeC
Q 017064          358 QTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       358 ~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++||+.+.+++..| |+||++
T Consensus       334 ~~A~~~l~~~~~~g-Kvvl~~  353 (353)
T 4dup_A          334 ADAHRLLEEGSHVG-KVMLTV  353 (353)
T ss_dssp             HHHHHHHHHTCCSS-EEEEEC
T ss_pred             HHHHHHHHhCCCCc-eEEEeC
Confidence            99999999999999 999986

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.5e-56  Score=418.23  Aligned_cols=326  Identities=21%  Similarity=0.218  Sum_probs=283.2

Q ss_pred             ccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        42 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      ..+|.+||++++..++.+.. +++++.|.|++++|||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|
T Consensus        16 ~~~p~~MkA~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG   94 (342)
T 4eye_A           16 TQGPGSMKAIQAQSLSGPEG-LVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAP   94 (342)
T ss_dssp             --CCCEEEEEEECSSSGGGG-EEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECC
T ss_pred             ccCCcceEEEEEecCCCCce-eEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEEC
Confidence            35788999999999887766 89999999999999999999999999999999999877655789999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchH
Q 017064          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV  201 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~  201 (378)
                      ++++ |++||||++... .|+|+||+++++++++++|+++++++||+++.+++|||+++.+.+++++|++|||+|++|++
T Consensus        95 ~~v~-~~vGDrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~i  172 (342)
T 4eye_A           95 EGSG-IKPGDRVMAFNF-IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGI  172 (342)
T ss_dssp             TTSS-CCTTCEEEEECS-SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHH
T ss_pred             CCCC-CCCCCEEEEecC-CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHH
Confidence            9999 999999999864 59999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhc
Q 017064          202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL  281 (378)
Q Consensus       202 G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l  281 (378)
                      |++++|+|++.|++|++++    .++++.+.++++|+++++++++...+.+++.+++.+ +|++|||+|++.+..+++++
T Consensus       173 G~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g-~Dvvid~~g~~~~~~~~~~l  247 (342)
T 4eye_A          173 GTAAIQIAKGMGAKVIAVV----NRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAG-VDMVVDPIGGPAFDDAVRTL  247 (342)
T ss_dssp             HHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSC-EEEEEESCC--CHHHHHHTE
T ss_pred             HHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCC-ceEEEECCchhHHHHHHHhh
Confidence            9999999999999999998    467888999999999999988445577888888766 99999999999999999999


Q ss_pred             ccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHH
Q 017064          282 SQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA  360 (378)
Q Consensus       282 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a  360 (378)
                      +++|+++.+|........++...++.+++++.|+....+.. ..++...+.++++++++++| +++.+ ++|+|+++++|
T Consensus       248 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A  325 (342)
T 4eye_A          248 ASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLR-THADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQA  325 (342)
T ss_dssp             EEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHH-HCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHH
T ss_pred             cCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhh-cCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHH
Confidence            99999999996654444566777888999999998765522 23445667899999999999 88775 68999999999


Q ss_pred             HHHHHccCCCCCceEeeC
Q 017064          361 LSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       361 ~~~~~~~~~~g~kvvv~~  378 (378)
                      |+.+.+++..| |+||++
T Consensus       326 ~~~~~~~~~~g-Kvvl~P  342 (342)
T 4eye_A          326 LQDFADGKVYG-KMVLVP  342 (342)
T ss_dssp             HHHHHTTCCCS-EEEEEC
T ss_pred             HHHHHhCCCCc-eEEEeC
Confidence            99999999999 999974

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.5e-55  Score=409.00  Aligned_cols=323  Identities=23%  Similarity=0.307  Sum_probs=290.2

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .+|.+||++++..++++.. +++++.|.|++++|||+|||.++|||++|++.+.|.++.  ++|.++|||++|+|+++|+
T Consensus         4 ~~p~~mka~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~P~i~G~e~~G~V~~vG~   80 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDV-IKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC--EKPYVLGREASGTVVAKGK   80 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGG-EEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC--CSSEECCSEEEEEEEEECT
T ss_pred             CCchheEEEEEecCCCCce-eEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCccccceEEEEEEECC
Confidence            3678899999999988755 899999999999999999999999999999999998763  5799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCCCCcccccceecc-CCceEEcCCCCCHhh---hhhccccHHHHHHHHHHHhccCCCCEEEEeCCC
Q 017064          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKD-QSVWHKVSKDSPMEY---AATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~~G~~~~~~~~~-~~~~~~iP~~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~  198 (378)
                      +|++|++||||++..  .|+|+||++++ ++.++++|+++++++   |++++++++|||+++.+.+++++|++|||+|++
T Consensus        81 ~v~~~~~GdrV~~~~--~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~  158 (334)
T 3qwb_A           81 GVTNFEVGDQVAYIS--NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAA  158 (334)
T ss_dssp             TCCSCCTTCEEEEEC--SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             CCCCCCCCCEEEEee--CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCC
Confidence            999999999999875  49999999999 999999999999999   888999999999999987899999999999988


Q ss_pred             chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHH
Q 017064          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKV  277 (378)
Q Consensus       199 g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~  277 (378)
                      |++|++++|+|++.|++|++++    .++++++.++++|+++++++++.+ .+.+.+.+++.+ +|++|||+|...++.+
T Consensus       159 g~iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g-~D~vid~~g~~~~~~~  233 (334)
T 3qwb_A          159 GGVGLILNQLLKMKGAHTIAVA----STDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKG-VDASFDSVGKDTFEIS  233 (334)
T ss_dssp             BHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEECCGGGGHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCC-ceEEEECCChHHHHHH
Confidence            9999999999999999999988    478899999999999999987754 467888887766 9999999999889999


Q ss_pred             HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeecccc
Q 017064          278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNN  356 (378)
Q Consensus       278 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~  356 (378)
                      +++++++|+++.+|........++...++.+++++.++....+..  .+..+.+.++++++++++|++++.+ ++|+|++
T Consensus       234 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  311 (334)
T 3qwb_A          234 LAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIA--DPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD  311 (334)
T ss_dssp             HHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC--SHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGG
T ss_pred             HHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccC--CHHHHHHHHHHHHHHHHCCCccCceeeEEcHHH
Confidence            999999999999997655444677778888999999887765533  3556777889999999999999875 6899999


Q ss_pred             HHHHHHHHHccCCCCCceEeeC
Q 017064          357 FQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       357 ~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++||+.+.+++..| |+||++
T Consensus       312 ~~~A~~~~~~~~~~g-Kvvi~~  332 (334)
T 3qwb_A          312 YRTAAADIESRKTVG-KLVLEI  332 (334)
T ss_dssp             HHHHHHHHHTTCCCB-EEEEEC
T ss_pred             HHHHHHHHHhCCCce-EEEEec
Confidence            999999999999999 999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=8.8e-56  Score=416.36  Aligned_cols=316  Identities=26%  Similarity=0.275  Sum_probs=282.1

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .+|.+||++++..++ +.. +++++.|.|++++|||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|+
T Consensus        23 ~m~~~mkA~~~~~~~-~~~-l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~  100 (363)
T 3uog_A           23 MMSKWMQEWSTETVA-PHD-LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK  100 (363)
T ss_dssp             CCCSEEEEEEBSCTT-TTC-CEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECT
T ss_pred             cCchhhEEEEEccCC-CCC-cEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECC
Confidence            477889999999773 222 899999999999999999999999999999999998775557899999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC-----------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          123 AVTRLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~-----------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      +|++|++||||++.+.                       .+|+|+||+++|+++++++|+++++++||+++++++|||++
T Consensus       101 ~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  180 (363)
T 3uog_A          101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFA  180 (363)
T ss_dssp             TCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHH
Confidence            9999999999998621                       25999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcC
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLAN  258 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~  258 (378)
                      +.+.+++++|++|||+| +|++|++++|+|+++|++|++++    .+++++++++++|++++++.+.. ..+.+++++++
T Consensus       181 l~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g  255 (363)
T 3uog_A          181 LVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS----SSREKLDRAFALGADHGINRLEEDWVERVYALTGD  255 (363)
T ss_dssp             HTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTT
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe----cCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCC
Confidence            98779999999999999 59999999999999999999988    57899999999999999995533 45678888888


Q ss_pred             CCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          259 LPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      .| +|+||||+|.+.+..++++++++|+++.+|........++...++.+++++.|++...          .+.++++++
T Consensus       256 ~g-~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~  324 (363)
T 3uog_A          256 RG-ADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH----------RRALEDLVG  324 (363)
T ss_dssp             CC-EEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC----------HHHHHHHHH
T ss_pred             CC-ceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC----------HHHHHHHHH
Confidence            76 9999999999899999999999999999997665456677788889999999987542          256888999


Q ss_pred             HHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          339 LAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       339 ~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++|++++.+ ++|+|+++++||+.+.+++ .| |+||+|
T Consensus       325 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~g-Kvvi~~  363 (363)
T 3uog_A          325 AVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FG-KVVIEF  363 (363)
T ss_dssp             HHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SB-EEEEEC
T ss_pred             HHHcCCCccceeeEEcHHHHHHHHHHHHcCC-Cc-cEEEeC
Confidence            99999999875 5899999999999999998 88 999986

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.9e-55  Score=405.47  Aligned_cols=322  Identities=24%  Similarity=0.291  Sum_probs=286.8

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++..++++.. +++++.|.|++++|||+|||.++|||++|++.+.|.++. .++|.++|||++|+|+++|++|++
T Consensus         1 MMkA~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            1 MAKRIQFSTVGGPEV-LEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             CEEEEEBSSCSSGGG-CEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CcEEEEEecCCCcce-eEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCC
Confidence            389999999998865 899999999999999999999999999999999998765 367999999999999999999999


Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av  206 (378)
                      |++||||++.....|+|+||+++++++++++|+++++++|+++++.++|||+++.+.+++++|++|||+|++|++|++++
T Consensus        79 ~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~  158 (325)
T 3jyn_A           79 FKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLAC  158 (325)
T ss_dssp             CCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHH
T ss_pred             CCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHH
Confidence            99999999887557999999999999999999999999999999999999999998889999999999998899999999


Q ss_pred             HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                      |+|++.|++|++++    .++++.+.++++|+++++++.+.+ .+.+++.+++.+ +|++|||+|++.+..++++++++|
T Consensus       159 ~~a~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g-~Dvvid~~g~~~~~~~~~~l~~~G  233 (325)
T 3jyn_A          159 QWAKALGAKLIGTV----SSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKK-CPVVYDGVGQDTWLTSLDSVAPRG  233 (325)
T ss_dssp             HHHHHHTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCC-EEEEEESSCGGGHHHHHTTEEEEE
T ss_pred             HHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCC-ceEEEECCChHHHHHHHHHhcCCC
Confidence            99999999999988    478899999999999999987764 467888888766 999999999988999999999999


Q ss_pred             EEEEEecCCCCCccccchhhhhc-CceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHH
Q 017064          286 TMVTYGGMSKKPITVSTSAFIFK-DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSK  363 (378)
Q Consensus       286 ~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~  363 (378)
                      +++.+|........++...++.+ .+++.+..+..+..  .+....+.++++++++++|++++.+ ++|||+++++||+.
T Consensus       234 ~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~  311 (325)
T 3jyn_A          234 LVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYAN--NAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIE  311 (325)
T ss_dssp             EEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSC--STTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHH
T ss_pred             EEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecC--CHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHH
Confidence            99999976544345666667666 67777665554422  3456677889999999999999874 68999999999999


Q ss_pred             HHccCCCCCceEeeC
Q 017064          364 ALGLHGSQPKQVIKF  378 (378)
Q Consensus       364 ~~~~~~~g~kvvv~~  378 (378)
                      +.+++..| |+||.+
T Consensus       312 ~~~~~~~G-kvvl~p  325 (325)
T 3jyn_A          312 LSARRTTG-STILIP  325 (325)
T ss_dssp             HHTTCCCS-CEEEEC
T ss_pred             HHcCCCCc-eEEEeC
Confidence            99999999 999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.6e-55  Score=408.10  Aligned_cols=326  Identities=25%  Similarity=0.373  Sum_probs=282.1

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      |+.+||++++..++++.+.+++++.|.|.+++|||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCC
Confidence            45679999999999875558999999999999999999999999999999999987765578999999999999999999


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      |++|++||||++... .|+|+||+++|+++++++|+++++++||++++.++|||+++.+.+++++|++|||+|++|++|+
T Consensus        81 v~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~  159 (340)
T 3gms_A           81 VSRELIGKRVLPLRG-EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGH  159 (340)
T ss_dssp             SCGGGTTCEEEECSS-SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHH
T ss_pred             CCCCCCCCEEEecCC-CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHH
Confidence            999999999998754 5999999999999999999999999999999999999999988899999999999999889999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      +++|+|++.|++|++++    .++++.+.++++|+++++++.+.+ .+.+++.+++.+ +|++|||+|++....++++++
T Consensus       160 ~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g-~Dvvid~~g~~~~~~~~~~l~  234 (340)
T 3gms_A          160 LFAQLSQILNFRLIAVT----RNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIG-ADAAIDSIGGPDGNELAFSLR  234 (340)
T ss_dssp             HHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEESSCHHHHHHHHHTEE
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHHhc
Confidence            99999999999999988    467788899999999999987765 467888888766 999999999988888889999


Q ss_pred             cCCEEEEEecCCCCCccccchhhh-hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc--ceeeccccHHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTSAFI-FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD--MELVPFNNFQT  359 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~--~~~~~l~~~~~  359 (378)
                      ++|+++.+|.....+  ++...+. ..++++..+....+.....+....+.++++++++++|++++.  .++|||+++++
T Consensus       235 ~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~  312 (340)
T 3gms_A          235 PNGHFLTIGLLSGIQ--VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKA  312 (340)
T ss_dssp             EEEEEEECCCTTSCC--CCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHH
T ss_pred             CCCEEEEEeecCCCC--CCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHH
Confidence            999999999655432  3333333 356666666555443333445567889999999999999973  56899999999


Q ss_pred             HHHHHHccCC-CCCceEeeC
Q 017064          360 ALSKALGLHG-SQPKQVIKF  378 (378)
Q Consensus       360 a~~~~~~~~~-~g~kvvv~~  378 (378)
                      ||+.+.+++. .| |+|+++
T Consensus       313 A~~~~~~~~~~~G-Kvvl~~  331 (340)
T 3gms_A          313 AVDVVQSAEKTKG-KVFLTS  331 (340)
T ss_dssp             HHHHHHCTTCCSS-EEEEEC
T ss_pred             HHHHHHhcCCCCC-eEEEEE
Confidence            9999999985 48 999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.8e-54  Score=404.74  Aligned_cols=332  Identities=22%  Similarity=0.281  Sum_probs=279.2

Q ss_pred             hccccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEE
Q 017064           39 AFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVY  118 (378)
Q Consensus        39 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~  118 (378)
                      .....+|.+||++++..++.+.. +++++.|.|.++++||+|||.++|||++|++.+.|.++..+.+|.++|||++|+|+
T Consensus        14 ~~~~~~~~~Mka~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~   92 (354)
T 2j8z_A           14 GTENLYFQSMLAVHFDKPGGPEN-LYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVA   92 (354)
T ss_dssp             -------CEEEEEEESSCSSGGG-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEE
T ss_pred             cccccchhheeEEEEccCCCccc-eEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence            33456788899999999887654 88999999999999999999999999999999998776544578999999999999


Q ss_pred             EecCCC-CCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCC
Q 017064          119 SVGSAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA  197 (378)
Q Consensus       119 ~vG~~v-~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~  197 (378)
                      ++|++| ++|++||||++... .|+|+||++++++.++++|+++++++||+++.+++|||+++.+.+++++|++|||+|+
T Consensus        93 ~vG~~v~~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga  171 (354)
T 2j8z_A           93 ELGPGCQGHWKIGDTAMALLP-GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAG  171 (354)
T ss_dssp             EECSCC--CCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESST
T ss_pred             EECCCcCCCCCCCCEEEEecC-CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            999999 99999999998764 5999999999999999999999999999999999999999987789999999999999


Q ss_pred             CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHH
Q 017064          198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASK  276 (378)
Q Consensus       198 ~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~  276 (378)
                      +|++|++++|+|+..|++|++++    .++++.+.++++|++.++++.+.+ .+.+.+.+++.+ +|++|||+|++.+..
T Consensus       172 ~ggiG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~G~~~~~~  246 (354)
T 2j8z_A          172 LSGVGTAAIQLTRMAGAIPLVTA----GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAG-VNLILDCIGGSYWEK  246 (354)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEESSCGGGHHH
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCC-ceEEEECCCchHHHH
Confidence            99999999999999999999888    478888889999999999887654 466777776655 999999999998899


Q ss_pred             HHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC---Cccccc-ee
Q 017064          277 VLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG---KLKYDM-EL  351 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g---~~~~~~-~~  351 (378)
                      ++++++++|+++.+|........++. ..++.+++++.|+..........+....+.++++++++++|   ++++.+ ++
T Consensus       247 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~  326 (354)
T 2j8z_A          247 NVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRI  326 (354)
T ss_dssp             HHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEE
T ss_pred             HHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceE
Confidence            99999999999999966544455666 67788999999987643211111122334456789999999   887764 68


Q ss_pred             eccccHHHHHHHHHccCCCCCceEeeC
Q 017064          352 VPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       352 ~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      |+|+++++||+.+.+++..| |+|+++
T Consensus       327 ~~l~~~~~A~~~~~~~~~~g-Kvvv~~  352 (354)
T 2j8z_A          327 YPVTEIQEAHKYMEANKNIG-KIVLEL  352 (354)
T ss_dssp             EEGGGHHHHHHHHHTTCCSS-EEEEEC
T ss_pred             EcHHHHHHHHHHHHhCCCCc-eEEEec
Confidence            99999999999999888888 999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=4.7e-54  Score=401.55  Aligned_cols=320  Identities=23%  Similarity=0.277  Sum_probs=278.5

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCC-CCCCccCCCceeEEEEEecC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR-PKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .|.+||++++..++++   +++.+.|.|.+++|||+|||.++|||++|++.+.|..+.. .++|.++|||++|+|+++|+
T Consensus         4 ~~~~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~   80 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGP---FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGP   80 (343)
T ss_dssp             --CEEEEEEECSTTCC---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECT
T ss_pred             CchhheEEEEecCCCc---eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECC
Confidence            3578999999999876   8899999999999999999999999999999999875432 36899999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCC
Q 017064          123 AVTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~  198 (378)
                      +|++|++||||++...    .+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++
T Consensus        81 ~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  160 (343)
T 3gaz_A           81 EVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGG  160 (343)
T ss_dssp             TCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTT
T ss_pred             CCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCC
Confidence            9999999999998653    269999999999999999999999999999999999999999777999999999999988


Q ss_pred             chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL  278 (378)
Q Consensus       199 g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~  278 (378)
                      |++|++++|+|++.|++|+++.     ++++++.++++|++. ++.+....+.+++.+++.+ +|++|||+|++.+..++
T Consensus       161 g~iG~~~~q~a~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g-~D~vid~~g~~~~~~~~  233 (343)
T 3gaz_A          161 GGVGHVAIQIALARGARVFATA-----RGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQG-FDLVYDTLGGPVLDASF  233 (343)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEE-----CHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSC-EEEEEESSCTHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCC-ceEEEECCCcHHHHHHH
Confidence            9999999999999999999884     678899999999999 7733344567888888766 99999999998889999


Q ss_pred             HhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechh-hhccccHHHHHHHHHHHHHHHHcCCccccce--eeccc
Q 017064          279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK-WLSSEKATECRNMIDYLLCLAREGKLKYDME--LVPFN  355 (378)
Q Consensus       279 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~--~~~l~  355 (378)
                      ++++++|+++.+|...    .++...++.+++++.+++... ++....+....+.++++++++++|++++.+.  +|+|+
T Consensus       234 ~~l~~~G~iv~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~  309 (343)
T 3gaz_A          234 SAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIA  309 (343)
T ss_dssp             HHEEEEEEEEESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETT
T ss_pred             HHHhcCCeEEEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHH
Confidence            9999999999998543    345667788999999976532 2233345567788999999999999998754  89999


Q ss_pred             cHHHHHHHHHccCC----CCCceEeeC
Q 017064          356 NFQTALSKALGLHG----SQPKQVIKF  378 (378)
Q Consensus       356 ~~~~a~~~~~~~~~----~g~kvvv~~  378 (378)
                      ++++||+.+.+++.    .| |+|+++
T Consensus       310 ~~~~A~~~~~~~~~~Gr~~G-K~v~~~  335 (343)
T 3gaz_A          310 EIGSAYDAVLGRNDVPRQRG-KIAITV  335 (343)
T ss_dssp             CHHHHHHHHHTCTTCCCCSS-BCEEEC
T ss_pred             HHHHHHHHHHcCCCcccccc-eEEEEe
Confidence            99999999999886    56 888875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.6e-54  Score=406.98  Aligned_cols=331  Identities=37%  Similarity=0.592  Sum_probs=281.0

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCC--CCcEEEEEEeeccChhhhhhhcccCCCCCCCC---------ccCCCce
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVK--ENDVCVKMLAAPINPSDINRIEGVYPVRPKVP---------AVGGYEG  113 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p---------~~~G~e~  113 (378)
                      |.+||++++..++++.+.+++++.|.|.++  +|||+|||.++|||++|++.+.|.++...++|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            357999999998875334788888888776  99999999999999999999998776433566         8999999


Q ss_pred             eEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCC-----------CCCHhhhhhccccHHHHHHHHHH
Q 017064          114 VGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK-----------DSPMEYAATIIVNPLTALRMLED  182 (378)
Q Consensus       114 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~-----------~~~~~~aa~~~~~~~ta~~~l~~  182 (378)
                      +|+|+++|++|++|++||||++.....|+|+||++++++.++++|+           ++++++||+++++++|||+++.+
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~  160 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTH  160 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHH
Confidence            9999999999999999999998865569999999999999999999           89999999999999999999988


Q ss_pred             HhccCCC-CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc----ccHHHHHHHh-
Q 017064          183 FTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKNVKGLL-  256 (378)
Q Consensus       183 ~~~~~~g-~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~----~~~~~i~~~~-  256 (378)
                      .+++++| ++|||+|++|++|++++|+||++|++++++++..+...++++.++++|+++++++++    ...+.+++++ 
T Consensus       161 ~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          161 YVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             SSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred             hhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence            7799999 999999999999999999999999999999854211124467788999999998874    3456788887 


Q ss_pred             -cCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064          257 -ANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY  335 (378)
Q Consensus       257 -~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (378)
                       ++.| +|+||||+|++....++++++++|+++.+|.....+..++...++.+++++.|++...+... .+....+.+++
T Consensus       241 ~~~~g-~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~  318 (364)
T 1gu7_A          241 QSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN-NKELKTSTLNQ  318 (364)
T ss_dssp             HHTCC-EEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTT-CHHHHHHHHHH
T ss_pred             ccCCC-ceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhccc-CHHHHHHHHHH
Confidence             5555 99999999998877899999999999999966544556677778889999999877654332 34455678999


Q ss_pred             HHHHHHcCCcccc-ceeecc---ccHHHHHHHHHccCCCCCceEeeC
Q 017064          336 LLCLAREGKLKYD-MELVPF---NNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       336 ~~~~l~~g~~~~~-~~~~~l---~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++|++++. ..+|++   +++++||+.+.+++..| |+||++
T Consensus       319 ~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  364 (364)
T 1gu7_A          319 IIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDG-KQLITY  364 (364)
T ss_dssp             HHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGS-CEEEEC
T ss_pred             HHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCc-eEEEeC
Confidence            9999999999985 455655   59999999999988888 999985

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.9e-54  Score=404.07  Aligned_cols=322  Identities=22%  Similarity=0.292  Sum_probs=271.1

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ++||++++..++++.. +++.+.|.|+++++||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|++|+
T Consensus         2 m~mka~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNK-LRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             CCEEEEEECSSSSGGG-EEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             ceeEEEEEccCCCcce-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCC
Confidence            5799999999988765 899999999999999999999999999999999998766567899999999999999999999


Q ss_pred             CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      +|++||||+++.. .|+|+||+++++++++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|++|+++
T Consensus        81 ~~~~GdrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a  159 (349)
T 4a27_A           81 GYEIGDRVMAFVN-YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAV  159 (349)
T ss_dssp             SCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHH
T ss_pred             CCCCCCEEEEecC-CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHH
Confidence            9999999998875 599999999999999999999999999999999999999998889999999999999999999999


Q ss_pred             HHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064          206 IQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG  284 (378)
Q Consensus       206 v~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~  284 (378)
                      +|+|+++| ++|++++     ++++.+.++ +|++++++.+....+.+++++++  ++|+||||+|++.+..++++++++
T Consensus       160 ~qla~~~g~~~V~~~~-----~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~--g~Dvv~d~~g~~~~~~~~~~l~~~  231 (349)
T 4a27_A          160 AQLCSTVPNVTVFGTA-----STFKHEAIK-DSVTHLFDRNADYVQEVKRISAE--GVDIVLDCLCGDNTGKGLSLLKPL  231 (349)
T ss_dssp             HHHHTTSTTCEEEEEE-----CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCTT--CEEEEEEECC-------CTTEEEE
T ss_pred             HHHHHHcCCcEEEEeC-----CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcCC--CceEEEECCCchhHHHHHHHhhcC
Confidence            99999985 5777776     456677777 99999999444455677777654  499999999998889999999999


Q ss_pred             CEEEEEecCCCCC----------------ccccchhhhhcCceEEEEechhhhcc-ccHHHHHHHHHHHHHHHHcCCccc
Q 017064          285 GTMVTYGGMSKKP----------------ITVSTSAFIFKDLSLKGFWLQKWLSS-EKATECRNMIDYLLCLAREGKLKY  347 (378)
Q Consensus       285 G~~v~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~~~  347 (378)
                      |+++.+|......                ..+++..++.+++++.++....+... .......+.++++++++++|++++
T Consensus       232 G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  311 (349)
T 4a27_A          232 GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKP  311 (349)
T ss_dssp             EEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             CEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccc
Confidence            9999999543111                22455667889999999987554322 223456788999999999999998


Q ss_pred             cc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          348 DM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       348 ~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+ ++|+|+++++|++.+.+++..| |+||++
T Consensus       312 ~i~~~~~l~~~~~A~~~l~~~~~~G-Kvvi~~  342 (349)
T 4a27_A          312 VVDSLWALEEVKEAMQRIHDRGNIG-KLILDV  342 (349)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTCCSS-EEEEET
T ss_pred             cccceECHHHHHHHHHHHHhCCCCc-eEEEec
Confidence            75 5899999999999999999999 999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.1e-53  Score=399.66  Aligned_cols=309  Identities=21%  Similarity=0.234  Sum_probs=277.3

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCC-CCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..++++   +++++.|.|++++|||+|||.++|||++|++.+.|.++.. .++|.++|||++|+|+++|++|++
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   77 (345)
T 3jv7_A            1 MKAVQYTEIGSE---PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTG   77 (345)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCS
T ss_pred             CeEEEEcCCCCc---eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCC
Confidence            799999999876   7889999999999999999999999999999999876532 367999999999999999999999


Q ss_pred             CCCCCEEeeCCC-------------------------------CCcccccceecc-CCceEEcCCCCCHhhhhhccccHH
Q 017064          127 LAPGDWVIPSPP-------------------------------SSGTWQSYVVKD-QSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       127 ~~~Gd~V~~~~~-------------------------------~~G~~~~~~~~~-~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      |++||||++.+.                               .+|+|+||++++ ++.++++|+ +++++||+++++++
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~  156 (345)
T 3jv7_A           78 FGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGL  156 (345)
T ss_dssp             CCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTH
T ss_pred             CCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHH
Confidence            999999987531                               269999999999 999999999 99999999999999


Q ss_pred             HHHHHHHH-HhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064          175 TALRMLED-FTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       175 ta~~~l~~-~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      |||+++.+ ...+++|++|||+|+ |++|++++|+||++ |++|+++.    .+++|.++++++|+++++++++...+.+
T Consensus       157 ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~v  231 (345)
T 3jv7_A          157 TPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVD----LDDDRLALAREVGADAAVKSGAGAADAI  231 (345)
T ss_dssp             HHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE----SCHHHHHHHHHTTCSEEEECSTTHHHHH
T ss_pred             HHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcCCCcHHHHH
Confidence            99999988 458999999999998 99999999999999 67888887    5889999999999999999887667789


Q ss_pred             HHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          253 KGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      ++++++.+ +|+||||+|++ .++.++++++++|+++.+|.....+.+++. .++.+++++.++....          .+
T Consensus       232 ~~~t~g~g-~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~----------~~  299 (345)
T 3jv7_A          232 RELTGGQG-ATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGT----------RS  299 (345)
T ss_dssp             HHHHGGGC-EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCC----------HH
T ss_pred             HHHhCCCC-CeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCC----------HH
Confidence            99998776 99999999997 789999999999999999976554556664 7788999999986542          25


Q ss_pred             HHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          332 MIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++++++++++|++++.+++|+|+++++||+.+.+++..| |+||++
T Consensus       300 ~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~G-kvvv~p  345 (345)
T 3jv7_A          300 ELMEVVALARAGRLDIHTETFTLDEGPAAYRRLREGSIRG-RGVVVP  345 (345)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEECSTTHHHHHHHHHHTCCSS-EEEECC
T ss_pred             HHHHHHHHHHcCCCceEEEEEcHHHHHHHHHHHHcCCCce-eEEeCC
Confidence            6889999999999999888999999999999999999999 999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.9e-54  Score=402.13  Aligned_cols=311  Identities=21%  Similarity=0.255  Sum_probs=268.8

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCC-CCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEe
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~v  120 (378)
                      .|.+||++++..++.+   +++++.|.|+ +++|||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++
T Consensus        12 ~~~~mka~~~~~~g~~---l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~v   88 (359)
T 1h2b_A           12 GVERLKAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEV   88 (359)
T ss_dssp             -----CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEE
T ss_pred             ChhhceEEEEecCCCC---cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEE
Confidence            3667999999998753   7889999999 99999999999999999999999987641  2257999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhh---hccc
Q 017064          121 GSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA---TIIV  171 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa---~~~~  171 (378)
                      |++|++|++||||++.+.                          ..|+|+||+++|+++++++|+++++++||   ++++
T Consensus        89 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~  168 (359)
T 1h2b_A           89 AEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD  168 (359)
T ss_dssp             CTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGT
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhh
Confidence            999999999999987642                          25999999999999999999999999999   7888


Q ss_pred             cHHHHHHHHHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH
Q 017064          172 NPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV  249 (378)
Q Consensus       172 ~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~  249 (378)
                      +++|||+++.+. +++++|++|||+|+ |++|++++|+||++ |++|++++    .+++++++++++|+++++|+++...
T Consensus       169 ~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~  243 (359)
T 1h2b_A          169 AGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALD----VKEEKLKLAERLGADHVVDARRDPV  243 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE----SSHHHHHHHHHTTCSEEEETTSCHH
T ss_pred             hHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCCEEEeccchHH
Confidence            999999999876 89999999999999 99999999999999 99998888    5788999999999999999876644


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCc---cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccH
Q 017064          250 KNVKGLLANLPEPALGFNCVGGN---SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKA  326 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (378)
                      +.+++++++.+ +|+|||++|++   .+..++++  ++|+++.+|.... + .++...++.+++++.|+....       
T Consensus       244 ~~v~~~~~g~g-~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-~-~~~~~~~~~~~~~i~g~~~~~-------  311 (359)
T 1h2b_A          244 KQVMELTRGRG-VNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-L-RFPTIRVISSEVSFEGSLVGN-------  311 (359)
T ss_dssp             HHHHHHTTTCC-EEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-C-CCCHHHHHHTTCEEEECCSCC-------
T ss_pred             HHHHHHhCCCC-CcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-C-CCCHHHHHhCCcEEEEecCCC-------
Confidence            56777877655 99999999997   67777877  9999999996543 3 566677888999999976432       


Q ss_pred             HHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          327 TECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       327 ~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         .+.++++++++++|++++.+++|+|+++++|++.+.+++..| |+|+++
T Consensus       312 ---~~~~~~~~~l~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  359 (359)
T 1h2b_A          312 ---YVELHELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLG-RAVLIP  359 (359)
T ss_dssp             ---HHHHHHHHHHHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSS-EEEEEC
T ss_pred             ---HHHHHHHHHHHHcCCCcceEEEEeHHHHHHHHHHHHcCCCce-EEEeeC
Confidence               256888999999999998778899999999999999988888 999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-53  Score=396.17  Aligned_cols=322  Identities=23%  Similarity=0.320  Sum_probs=280.2

Q ss_pred             CCcccceEEEcccCCCccceEE-eeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .|.+||++++..++.+.. +++ ++.|.|.++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+
T Consensus        26 ~~~~Mka~~~~~~g~~~~-l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  104 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEV-LKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGD  104 (351)
T ss_dssp             --CEEEEEEESSCSSGGG-EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECT
T ss_pred             CcceEEEEEEccCCCcce-eEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECC
Confidence            345799999998887654 888 799999999999999999999999999999987654446799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G  202 (378)
                      +|++|++||||++.....|+|+||+++++++++++|+++++++||++++++.|||+++.+.+++++|++|||+|++|++|
T Consensus       105 ~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG  184 (351)
T 1yb5_A          105 NASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVG  184 (351)
T ss_dssp             TCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHH
T ss_pred             CCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHH
Confidence            99999999999998655699999999999999999999999999999999999999998778999999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhc
Q 017064          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFL  281 (378)
Q Consensus       203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l  281 (378)
                      ++++|+|+..|++|++++    .++++.+.++++|+++++++.+.+ .+.+.+.+++.+ +|++|||+|.+.+..+++++
T Consensus       185 ~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~-~D~vi~~~G~~~~~~~~~~l  259 (351)
T 1yb5_A          185 LAACQIARAYGLKILGTA----GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKG-IDIIIEMLANVNLSKDLSLL  259 (351)
T ss_dssp             HHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHHE
T ss_pred             HHHHHHHHHCCCEEEEEe----CChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCC-cEEEEECCChHHHHHHHHhc
Confidence            999999999999999888    478888899999999999887654 466777777655 99999999998888999999


Q ss_pred             ccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHH
Q 017064          282 SQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA  360 (378)
Q Consensus       282 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a  360 (378)
                      +++|+++.+|..  .+..++...++.+++++.|+.+...    .++...+.++.+.+++++|++++.+ ++|||+++++|
T Consensus       260 ~~~G~iv~~g~~--~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A  333 (351)
T 1yb5_A          260 SHGGRVIVVGSR--GTIEINPRDTMAKESSIIGVTLFSS----TKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEA  333 (351)
T ss_dssp             EEEEEEEECCCC--SCEEECTHHHHTTTCEEEECCGGGC----CHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHH
T ss_pred             cCCCEEEEEecC--CCCccCHHHHHhCCcEEEEEEeecC----CHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHH
Confidence            999999999853  2345666777889999999865322    3456777888899999999998875 68999999999


Q ss_pred             HHH-HHccCCCCCceEeeC
Q 017064          361 LSK-ALGLHGSQPKQVIKF  378 (378)
Q Consensus       361 ~~~-~~~~~~~g~kvvv~~  378 (378)
                      ++. +.+++..| |+||++
T Consensus       334 ~~~~~~~~~~~g-Kvvi~~  351 (351)
T 1yb5_A          334 HENIIHGSGATG-KMILLL  351 (351)
T ss_dssp             HHHHHHSSCCSS-EEEEEC
T ss_pred             HHHHHHhCCCCe-EEEEeC
Confidence            998 56566788 999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.7e-53  Score=396.27  Aligned_cols=308  Identities=22%  Similarity=0.296  Sum_probs=273.4

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++..++.+   +++++.|.|++++|||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|++|++
T Consensus         2 ~MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   78 (340)
T 3s2e_A            2 MMKAAVVRAFGAP---LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSR   78 (340)
T ss_dssp             EEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCS
T ss_pred             ceEEEEEecCCCC---CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCc
Confidence            5899999988765   7889999999999999999999999999999999988765578999999999999999999999


Q ss_pred             CCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          127 LAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       127 ~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      |++||||+...                           ..+|+|+||+++|+++++++|+++++++||++++++.|||++
T Consensus        79 ~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  158 (340)
T 3s2e_A           79 VKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKG  158 (340)
T ss_dssp             CCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHH
Confidence            99999994311                           125999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcC
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLAN  258 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~  258 (378)
                      +.. .++++|++|||+|+ |++|++++|+|+++|++|++++    .++++.++++++|+++++++++.+. +.+++ +.+
T Consensus       159 l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~-~~g  231 (340)
T 3s2e_A          159 LKV-TDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVD----IDDAKLNLARRLGAEVAVNARDTDPAAWLQK-EIG  231 (340)
T ss_dssp             HHT-TTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSEEEETTTSCHHHHHHH-HHS
T ss_pred             HHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHH-hCC
Confidence            954 89999999999998 9999999999999999999988    5789999999999999999887654 55666 555


Q ss_pred             CCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHH
Q 017064          259 LPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL  337 (378)
Q Consensus       259 ~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (378)
                       + +|++||++|+ ..++.++++++++|+++.+|... .+..++...++.+++++.|+....          .+.+++++
T Consensus       232 -~-~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~  298 (340)
T 3s2e_A          232 -G-AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGITIRGSIVGT----------RSDLQESL  298 (340)
T ss_dssp             -S-EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCS-SEEEEEHHHHHHTTCEEEECCSCC----------HHHHHHHH
T ss_pred             -C-CCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCC-CCCCCCHHHHHhCCeEEEEEecCC----------HHHHHHHH
Confidence             4 9999999986 56689999999999999998554 345566777888999999986542          25688899


Q ss_pred             HHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          338 CLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       338 ~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++|++++.+++|+|+++++|++.+.+++..| |+||++
T Consensus       299 ~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~G-kvvv~~  338 (340)
T 3s2e_A          299 DFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEG-RVVLDF  338 (340)
T ss_dssp             HHHHTTSCCCCEEEECGGGHHHHHHHHHTTCCCS-EEEEEC
T ss_pred             HHHHhCCCCceEEEEeHHHHHHHHHHHHcCCCce-EEEEec
Confidence            9999999999988999999999999999999999 999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.8e-53  Score=396.93  Aligned_cols=318  Identities=20%  Similarity=0.225  Sum_probs=276.7

Q ss_pred             ccceEEEcccC---CCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           47 PSKAVVYEREG---PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        47 ~~~a~~~~~~~---~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +||++++..++   .+. .+++.+.|.|++++|||+|||.++|||++|++.+.|..   .++|.++|||++|+|+++|++
T Consensus         2 ~MkA~~~~~~G~~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~---~~~p~i~G~e~~G~V~~vG~~   77 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGN-LFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV---SKAPRVLGFDAIGVVESVGNE   77 (346)
T ss_dssp             CEEEEEBSSCCCGGGCC-CCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSCC---SSSCBCCCCCEEEEEEEECTT
T ss_pred             CcEEEEEEeccccCCCc-eeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCC---CCCCcCcCCccEEEEEEeCCC
Confidence            69999999987   343 38999999999999999999999999999999988862   357999999999999999999


Q ss_pred             CCCCCCCCEEeeCC--CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccC------CCCEEEEe
Q 017064          124 VTRLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN------SGDSIVQN  195 (378)
Q Consensus       124 v~~~~~Gd~V~~~~--~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~VlV~  195 (378)
                      |++|++||+|++..  ...|+|+||+++++++++++|+++++++|++++++++|||+++.+.++++      +|++|||+
T Consensus        78 v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~  157 (346)
T 3fbg_A           78 VTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLII  157 (346)
T ss_dssp             CCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEE
T ss_pred             CCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEE
Confidence            99999999999864  23699999999999999999999999999999999999999998888898      99999999


Q ss_pred             CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc-H
Q 017064          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS-A  274 (378)
Q Consensus       196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~-~  274 (378)
                      |++|++|++++|+|++.|++|++++    .+++++++++++|+++++++++...+.+++. .+.+ +|++|||+|++. +
T Consensus       158 gg~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~~~g-~Dvv~d~~g~~~~~  231 (346)
T 3fbg_A          158 NGAGGVGSIATQIAKAYGLRVITTA----SRNETIEWTKKMGADIVLNHKESLLNQFKTQ-GIEL-VDYVFCTFNTDMYY  231 (346)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEC----CSHHHHHHHHHHTCSEEECTTSCHHHHHHHH-TCCC-EEEEEESSCHHHHH
T ss_pred             cCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEECCccHHHHHHHh-CCCC-ccEEEECCCchHHH
Confidence            8889999999999999999999988    5789999999999999999987666677777 4444 999999999865 5


Q ss_pred             HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhh--hccccHHHHHHHHHHHHHHHHcCCccccc-ee
Q 017064          275 SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKW--LSSEKATECRNMIDYLLCLAREGKLKYDM-EL  351 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~  351 (378)
                      +.++++++++|+++.++.   ....++...+..+++++.+++....  +.........+.++++++++++|++++.+ ++
T Consensus       232 ~~~~~~l~~~G~iv~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~  308 (346)
T 3fbg_A          232 DDMIQLVKPRGHIATIVA---FENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKV  308 (346)
T ss_dssp             HHHHHHEEEEEEEEESSC---CSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             HHHHHHhccCCEEEEECC---CCCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccce
Confidence            899999999999998873   2344666777889999998765432  11123445678899999999999999875 45


Q ss_pred             e---ccccHHHHHHHHHccCCCCCceEeeC
Q 017064          352 V---PFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       352 ~---~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      |   +++++++|++.+.+++..| |+|+++
T Consensus       309 ~~~~~l~~~~~A~~~~~~g~~~G-Kvvl~~  337 (346)
T 3fbg_A          309 IEGLTTENIYQAHQILESNTMIG-KLVINL  337 (346)
T ss_dssp             EESCCHHHHHHHHHHHHTTCCCS-EEEEEC
T ss_pred             ecCCCHHHHHHHHHHHhcCCcce-EEEEec
Confidence            6   9999999999999999999 999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.4e-53  Score=398.12  Aligned_cols=308  Identities=20%  Similarity=0.225  Sum_probs=271.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++...++.  .+++.|.|.|+|++|||||||.++|||++|++.+.|.++.  ++|.++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~--~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDG--YADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCS--SEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCC--cEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEEEECceeeec
Confidence            799888643322  2899999999999999999999999999999999998765  579999999999999999999999


Q ss_pred             CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||||++.+.                           .+|+|+||+.++++.++++|+++++++|++++++++|||+++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  156 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI  156 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee
Confidence            99999976431                           158999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLAN  258 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~  258 (378)
                      .. +++++|++|||+|+ |++|.+++|+|++. |++|++++    .+++|+++++++|+++++|+.+.+ .+++++++++
T Consensus       157 ~~-~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~----~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g  230 (348)
T 4eez_A          157 KV-SGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVD----INQDKLNLAKKIGADVTINSGDVNPVDEIKKITGG  230 (348)
T ss_dssp             HH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEE----SCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTS
T ss_pred             cc-cCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEE----CcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCC
Confidence            65 88999999999998 99999999999865 77898888    588999999999999999998765 5779999998


Q ss_pred             CCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHH
Q 017064          259 LPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL  337 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (378)
                      .| +|.+++++++. .+..++++++++|+++.+|.. .....++...++.+++++.|+..++.          ..+++++
T Consensus       231 ~g-~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i~gs~~~~~----------~~~~~~~  298 (348)
T 4eez_A          231 LG-VQSAIVCAVARIAFEQAVASLKPMGKMVAVAVP-NTEMTLSVPTVVFDGVEVAGSLVGTR----------LDLAEAF  298 (348)
T ss_dssp             SC-EEEEEECCSCHHHHHHHHHTEEEEEEEEECCCC-SCEEEECHHHHHHSCCEEEECCSCCH----------HHHHHHH
T ss_pred             CC-ceEEEEeccCcchhheeheeecCCceEEEEecc-CCCCccCHHHHHhCCeEEEEEecCCH----------HHHHHHH
Confidence            87 99999999885 468999999999999999854 34456777888899999999876432          4578889


Q ss_pred             HHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          338 CLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       338 ~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++|++++.+++|||+|+++||+.+++++..| |+||+|
T Consensus       299 ~l~~~g~i~p~~~~~~l~~~~~A~~~l~~g~~~G-KvVl~~  338 (348)
T 4eez_A          299 QFGAEGKVKPIVATRKLEEINDIIDEMKAGKIEG-RMVIDF  338 (348)
T ss_dssp             HHHHTTSCCCCEEEECGGGHHHHHHHHHTTCCSS-EEEEEC
T ss_pred             HHHHcCCCEEEEEEEeHHHHHHHHHHHHCCCCcc-EEEEEc
Confidence            9999999999889999999999999999999999 999986

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.7e-54  Score=405.65  Aligned_cols=326  Identities=22%  Similarity=0.346  Sum_probs=276.1

Q ss_pred             cCCcccceEEEc--ccCCCccceEEeee---------CCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCC
Q 017064           43 LMSPPSKAVVYE--REGPPDSVIKMIEL---------PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY  111 (378)
Q Consensus        43 ~~~~~~~a~~~~--~~~~~~~~~~~~~~---------~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~  111 (378)
                      .+|.+||++++.  +.++..+.+++++.         |.|++++|||+|||.++|||++|++.+.|.++...++|.++||
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~   85 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGF   85 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCS
T ss_pred             CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccc
Confidence            367889999999  44211122777777         9999999999999999999999999999987655578999999


Q ss_pred             ceeEEEEEecCCC-CCCCCCCEEeeCC--CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC
Q 017064          112 EGVGEVYSVGSAV-TRLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS  188 (378)
Q Consensus       112 e~~G~V~~vG~~v-~~~~~Gd~V~~~~--~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  188 (378)
                      |++|+|+++|++| ++|++||||++..  ..+|+|+||+++++++++++|+++++++||++++.++|||+++.. ++ .+
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~-~~-~~  163 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDI-VK-QE  163 (349)
T ss_dssp             EEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHH-HH-HH
T ss_pred             eEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHH-Hh-hC
Confidence            9999999999999 9999999999875  236999999999999999999999999999999999999966654 66 56


Q ss_pred             C-CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEE
Q 017064          189 G-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGF  266 (378)
Q Consensus       189 g-~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvi  266 (378)
                      | ++|||+|++|++|++++|+|++.|++|++++    .+++++++++++|+++++|+++.+ .+.+++.+++.+ +|++|
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g-~D~vi  238 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTV----RRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQ-PRIFL  238 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEE----SCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHC-CCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCC-CcEEE
Confidence            6 7999999999999999999999999999998    467888999999999999987754 467888887655 99999


Q ss_pred             eCCCCccHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCc
Q 017064          267 NCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL  345 (378)
Q Consensus       267 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  345 (378)
                      ||+|++.+..++++++++|+++.+|........++. ..++.+++++.|++...+... .+....+.++++++++++|++
T Consensus       239 d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~l  317 (349)
T 3pi7_A          239 DAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQ-FKERRGPAILEAQKRFSDGRW  317 (349)
T ss_dssp             ESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHH-THHHHHHHHHHC-CTTTTSSC
T ss_pred             ECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhh-CcHHHHHHHHHHHHHHHcCCc
Confidence            999998889999999999999999976665566777 788889999999987765332 335567889999999999999


Q ss_pred             cccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          346 KYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       346 ~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.+ ++|+|+++++|++.+ +++..| |+||++
T Consensus       318 ~~~i~~~~~l~~~~~A~~~~-~~~~~g-Kvvl~p  349 (349)
T 3pi7_A          318 STDVTAVVPLAEAIAWVPAE-LTKPNG-KVFIRP  349 (349)
T ss_dssp             CC-CCEEEEHHHHHHHHHHH-HTSSSS-CEEEEC
T ss_pred             ccccceEEcHHHHHHHHHHH-hCCCCc-eEEEeC
Confidence            9875 689999999999954 455678 999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=5.3e-53  Score=397.12  Aligned_cols=322  Identities=24%  Similarity=0.278  Sum_probs=277.1

Q ss_pred             CCcccceEEEccc---CCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           44 MSPPSKAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        44 ~~~~~~a~~~~~~---~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      .+.+||++++..+   +.+.. +++.+.|.|.+++|||+|||.++|||++|++.+.|..+. .++|.++|||++|+|+++
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~-l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~v   96 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDAS-LLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAGIVSAV   96 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTS-SEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEE
T ss_pred             hhheeEEEEEeccCCCCCCce-EEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEEEEEEe
Confidence            4578999999887   44444 899999999999999999999999999999999988764 367999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCC--CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccC-----CCCEEE
Q 017064          121 GSAVTRLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN-----SGDSIV  193 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~--~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-----~g~~Vl  193 (378)
                      |++|++|++||||++..  ...|+|+||++++++.++++|+++++++||+++++++|||+++.+.++++     +|++||
T Consensus        97 G~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~Vl  176 (363)
T 4dvj_A           97 GPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAIL  176 (363)
T ss_dssp             CTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEE
T ss_pred             CCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEE
Confidence            99999999999999864  23699999999999999999999999999999999999999998888888     899999


Q ss_pred             EeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc
Q 017064          194 QNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       194 V~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      |+||+|++|++++|+||+ .|++|++++    .++++.++++++|+++++++.+...+.++++ .+. ++|+||||+|++
T Consensus       177 V~Ga~G~vG~~a~qlak~~~g~~Vi~~~----~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~-~~~-g~Dvvid~~g~~  250 (363)
T 4dvj_A          177 IVGGAGGVGSIAVQIARQRTDLTVIATA----SRPETQEWVKSLGAHHVIDHSKPLAAEVAAL-GLG-APAFVFSTTHTD  250 (363)
T ss_dssp             EESTTSHHHHHHHHHHHHHCCSEEEEEC----SSHHHHHHHHHTTCSEEECTTSCHHHHHHTT-CSC-CEEEEEECSCHH
T ss_pred             EECCCCHHHHHHHHHHHHhcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh-cCC-CceEEEECCCch
Confidence            999889999999999998 589999988    5789999999999999999887666677776 443 499999999986


Q ss_pred             -cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhh--hccccHHHHHHHHHHHHHHHHcCCccccc
Q 017064          273 -SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKW--LSSEKATECRNMIDYLLCLAREGKLKYDM  349 (378)
Q Consensus       273 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  349 (378)
                       .++.++++++++|+++.+|.    +..++...++.+++++.++.....  +.........+.++++++++++|++++.+
T Consensus       251 ~~~~~~~~~l~~~G~iv~~g~----~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i  326 (363)
T 4dvj_A          251 KHAAEIADLIAPQGRFCLIDD----PSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTL  326 (363)
T ss_dssp             HHHHHHHHHSCTTCEEEECSC----CSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCE
T ss_pred             hhHHHHHHHhcCCCEEEEECC----CCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccc
Confidence             67899999999999999863    335667778889999998765431  11122234467899999999999999874


Q ss_pred             e-ee---ccccHHHHHHHHHccCCCCCceEeeC
Q 017064          350 E-LV---PFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       350 ~-~~---~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      . +|   +++++++||+.+.+++..| |+||++
T Consensus       327 ~~~~~~~~l~~~~~A~~~~~~~~~~G-KvVl~~  358 (363)
T 4dvj_A          327 TNRLSPINAANLKQAHALVESGTARG-KVVIEG  358 (363)
T ss_dssp             EEEECSCSHHHHHHHHHHHHHTCCCS-EEEEEC
T ss_pred             cceecCCCHHHHHHHHHHHHhCCCce-EEEEeC
Confidence            3 44   9999999999999999999 999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.7e-54  Score=400.55  Aligned_cols=315  Identities=17%  Similarity=0.189  Sum_probs=274.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++++.. +++++.|.|++++|||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|  +++|
T Consensus         1 MkA~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~   77 (324)
T 3nx4_A            1 MQALILEQQDGKTL-ASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRF   77 (324)
T ss_dssp             CEEEEEEESSSSEE-EEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTC
T ss_pred             CceEEEecCCCCce-eeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCC
Confidence            79999999998754 89999999999999999999999999999999999877655789999999999999998  6899


Q ss_pred             CCCCEEeeCC-----CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH--hccCCCC-EEEEeCCCc
Q 017064          128 APGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGD-SIVQNGATS  199 (378)
Q Consensus       128 ~~Gd~V~~~~-----~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~VlV~g~~g  199 (378)
                      ++||||++.+     ...|+|+||+++|+++++++|+++++++||+++++++|||+++...  .++++++ +|||+|++|
T Consensus        78 ~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G  157 (324)
T 3nx4_A           78 HAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASG  157 (324)
T ss_dssp             CTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTS
T ss_pred             CCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCc
Confidence            9999999753     1369999999999999999999999999999999999999998643  4566633 499999999


Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (378)
Q Consensus       200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~  279 (378)
                      ++|++++|+||++|++|++++    .++++.++++++|+++++|+++.+.  +++++++  ++|++|||+|++.++.+++
T Consensus       158 ~vG~~aiqla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~--~~~~~~~--~~d~v~d~~g~~~~~~~~~  229 (324)
T 3nx4_A          158 GVGSTAVALLHKLGYQVAAVS----GRESTHGYLKSLGANRILSRDEFAE--SRPLEKQ--LWAGAIDTVGDKVLAKVLA  229 (324)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHTCSEEEEGGGSSC--CCSSCCC--CEEEEEESSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCCEEEecCCHHH--HHhhcCC--CccEEEECCCcHHHHHHHH
Confidence            999999999999999999998    4788999999999999999876542  4444444  4999999999998899999


Q ss_pred             hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 017064          280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT  359 (378)
Q Consensus       280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~  359 (378)
                      +++++|+++.+|.......+++...++.+++++.|++...+    .+....+.++++++++++|++++..++|+|+++++
T Consensus       230 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~  305 (324)
T 3nx4_A          230 QMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMT----PPARRAEAWARLVKDLPESFYAQAATEITLADAPK  305 (324)
T ss_dssp             TEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTC----CHHHHHHHHHHHHHHSCHHHHHHHEEEEEGGGHHH
T ss_pred             HHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEecccc----ChHHHHHHHHHHHHHHHcCCCCCCceeEeHHHHHH
Confidence            99999999999976554456667778889999999865432    34456678999999999999998767899999999


Q ss_pred             HHHHHHccCCCCCceEeeC
Q 017064          360 ALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       360 a~~~~~~~~~~g~kvvv~~  378 (378)
                      ||+.+.+++..| |+||++
T Consensus       306 A~~~~~~~~~~g-kvvv~~  323 (324)
T 3nx4_A          306 FADAIINNQVQG-RTLVKI  323 (324)
T ss_dssp             HHHHHHTTCCCS-EEEEEC
T ss_pred             HHHHHHhCCCCc-eEEEec
Confidence            999999999999 999975

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.6e-53  Score=397.51  Aligned_cols=304  Identities=18%  Similarity=0.213  Sum_probs=266.0

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      |+.+||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++.. ++|.++|||++|+|+++|++
T Consensus         1 M~m~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~p~i~G~E~~G~V~~vG~~   76 (348)
T 3two_A            1 MRVQSKGFAIFSKDEH---FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEG-IYPMIPGHEIAGIIKEVGKG   76 (348)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCC-CSSBCCCCCEEEEEEEECTT
T ss_pred             CceEEEEEEEccCCCC---CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCC-CCCeecCcceeEEEEEECCC
Confidence            3467999999988764   8899999999999999999999999999999999887643 67999999999999999999


Q ss_pred             CCCCCCCCEEeeCCC--------------------------C----------CcccccceeccCCceEEcCCCCCHhhhh
Q 017064          124 VTRLAPGDWVIPSPP--------------------------S----------SGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~--------------------------~----------~G~~~~~~~~~~~~~~~iP~~~~~~~aa  167 (378)
                      |++|++||||++.+.                          .          .|+|+||+++|+++++++|+++++++||
T Consensus        77 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  156 (348)
T 3two_A           77 VKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA  156 (348)
T ss_dssp             CCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             CCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhh
Confidence            999999999976421                          0          2999999999999999999999999999


Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      ++++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+++|++|++++    .+++++++++++|+++++ .+..
T Consensus       157 ~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~v~-~~~~  229 (348)
T 3two_A          157 PLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFA----RNEHKKQDALSMGVKHFY-TDPK  229 (348)
T ss_dssp             GGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEEC----SSSTTHHHHHHTTCSEEE-SSGG
T ss_pred             hhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCeec-CCHH
Confidence            999999999999986 69999999999998 9999999999999999999887    467888899999999998 3332


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCcc-ccchhhh-hcCceEEEEechhhhccc
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPIT-VSTSAFI-FKDLSLKGFWLQKWLSSE  324 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  324 (378)
                      .   +.+     + +|+||||+|++ .++.++++++++|+++.+|.....+.. ++...++ .+++++.|+.....    
T Consensus       230 ~---~~~-----~-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----  296 (348)
T 3two_A          230 Q---CKE-----E-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGI----  296 (348)
T ss_dssp             G---CCS-----C-EEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCH----
T ss_pred             H---Hhc-----C-CCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCH----
Confidence            2   111     3 99999999998 889999999999999999965413333 5666676 89999999876532    


Q ss_pred             cHHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          325 KATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                            +.++++++++++|++++.+++|||+++++||+.+.+++..| |+||++
T Consensus       297 ------~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~g-KvVi~~  343 (348)
T 3two_A          297 ------KETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKF-RYVIDM  343 (348)
T ss_dssp             ------HHHHHHHHHHHHTTCCCCEEEECGGGHHHHHHHHHTTCCCS-EEEEEG
T ss_pred             ------HHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHHHHcCCCce-EEEEec
Confidence                  45788999999999999888999999999999999999999 999974

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.1e-52  Score=397.55  Aligned_cols=315  Identities=20%  Similarity=0.263  Sum_probs=271.7

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .+|.+||++++..++++   +++++.|.|+++++||+|||+++|||++|++.+.|..+. .++|.++|||++|+|+++|+
T Consensus         4 ~~~~tmkA~v~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~   79 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKP---LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE   79 (378)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEECT
T ss_pred             ccceeeEEEEEecCCCc---cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC-CCCCccCCccceEEEEEeCC
Confidence            46788999999999876   788999999999999999999999999999999988653 36899999999999999999


Q ss_pred             CCCCCCCCCEEeeCCCC------------------------------------------------CcccccceeccCCce
Q 017064          123 AVTRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVW  154 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~------------------------------------------------~G~~~~~~~~~~~~~  154 (378)
                      +|++|++||||++.+..                                                .|+|+||++++++.+
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  159 (378)
T 3uko_A           80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSV  159 (378)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhhe
Confidence            99999999999875431                                                169999999999999


Q ss_pred             EEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH
Q 017064          155 HKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL  233 (378)
Q Consensus       155 ~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~  233 (378)
                      +++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .+++|++++
T Consensus       160 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~----~~~~~~~~a  234 (378)
T 3uko_A          160 AKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGID----IDSKKYETA  234 (378)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEEC----SCTTHHHHH
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHH
Confidence            9999999999999999999999999988899999999999998 9999999999999999 787776    478899999


Q ss_pred             HhCCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhh
Q 017064          234 KGLGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIF  307 (378)
Q Consensus       234 ~~~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  307 (378)
                      +++|+++++++.+  . ..+.+++++++ | +|+||||+|+ ..++.++++++++ |+++.+|.... ....++...++ 
T Consensus       235 ~~lGa~~vi~~~~~~~~~~~~i~~~~~g-g-~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-  311 (378)
T 3uko_A          235 KKFGVNEFVNPKDHDKPIQEVIVDLTDG-G-VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-  311 (378)
T ss_dssp             HTTTCCEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-
T ss_pred             HHcCCcEEEccccCchhHHHHHHHhcCC-C-CCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-
Confidence            9999999999873  3 35678888887 5 9999999999 4678999999996 99999996542 33445555555 


Q ss_pred             cCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          308 KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++.|+.+..+.       ..+.++++++++.+|++++.   .++|||+++++||+.+.+++. . |+||++
T Consensus       312 ~~~~i~g~~~~~~~-------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~-~-Kvvi~~  376 (378)
T 3uko_A          312 TGRVWKGTAFGGFK-------SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTC-L-RCVLDT  376 (378)
T ss_dssp             TTCEEEECSGGGCC-------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTC-S-EEEEET
T ss_pred             cCcEEEEEEecCCC-------chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCc-e-EEEEec
Confidence            48999998765431       23568889999999999853   468999999999999988775 4 999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=8.6e-53  Score=391.77  Aligned_cols=321  Identities=20%  Similarity=0.261  Sum_probs=275.5

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC-CCC-CCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-PVR-PKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++++..++.+.. +++++.|.|.+++|||+|||.++|||++|++.+.|.+ +.. ..+|.++|||++|+|+++|++|+
T Consensus         2 Mka~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGGPDN-FVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSSGGG-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCCcce-eEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            89999999887654 8999999999999999999999999999999998865 211 35799999999999999999999


Q ss_pred             CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhh--hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY--AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      +|++||||++.....|+|+||+++|++.++++|+++++++  |++++.+++|||+++.+.+++++|++|||+|++|++|+
T Consensus        81 ~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~  160 (333)
T 1wly_A           81 DFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGH  160 (333)
T ss_dssp             SCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHH
T ss_pred             CCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHH
Confidence            9999999987653259999999999999999999999999  99999999999999987789999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~  282 (378)
                      +++|+|+..|++|++++    .++++.+.++++|++++++..+.+ .+.+.+.+.+.+ +|++|||+|+..++.++++++
T Consensus       161 ~~~~~a~~~G~~Vi~~~----~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~  235 (333)
T 1wly_A          161 IMVPWARHLGATVIGTV----STEEKAETARKLGCHHTINYSTQDFAEVVREITGGKG-VDVVYDSIGKDTLQKSLDCLR  235 (333)
T ss_dssp             HHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCC-EEEEEECSCTTTHHHHHHTEE
T ss_pred             HHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCC-CeEEEECCcHHHHHHHHHhhc
Confidence            99999999999999988    467888889999999999887654 456777776655 999999999988899999999


Q ss_pred             cCCEEEEEecCCCCCccccch-hhhhcC--ceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHH
Q 017064          283 QGGTMVTYGGMSKKPITVSTS-AFIFKD--LSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQ  358 (378)
Q Consensus       283 ~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~  358 (378)
                      ++|+++.+|........++.. .++.++  +++.|++...+   ..+....+.++++++++++|++++.+ ++|||++++
T Consensus       236 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  312 (333)
T 1wly_A          236 PRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYM---SNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAA  312 (333)
T ss_dssp             EEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGS---CSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHH
T ss_pred             cCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhc---cCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHH
Confidence            999999999665434456666 677888  99988754221   23455667899999999999999875 689999999


Q ss_pred             HHHHHHHccCCCCCceEeeC
Q 017064          359 TALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       359 ~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +|++.+.+++..| |+|+++
T Consensus       313 ~A~~~~~~~~~~g-Kvvi~~  331 (333)
T 1wly_A          313 AAHKYMGGRQTIG-SIVLLP  331 (333)
T ss_dssp             HHHHHHHHCSCCS-EEEEET
T ss_pred             HHHHHHHcCCCce-EEEEEe
Confidence            9999999988888 999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-52  Score=392.81  Aligned_cols=314  Identities=18%  Similarity=0.267  Sum_probs=274.0

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +|.+||++++..++.+   +++++.|.|.++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++
T Consensus         2 ~p~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   78 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGEN   78 (347)
T ss_dssp             CCSEEEEEEESSTTCC---CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTT
T ss_pred             CCcccEEEEEeCCCCC---CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCC
Confidence            5778999999998853   7889999999999999999999999999999999876644467999999999999999999


Q ss_pred             CCCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064          124 VTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       124 v~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      |++|++||||++.+                           ...|+|+||+++|+++++++|+++++++|++++++++||
T Consensus        79 v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           79 VKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            99999999998642                           125899999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-ccc-HHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QLE-VKNVKG  254 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~~~-~~~i~~  254 (378)
                      |+++.+ .++++|++|||+|++|++|++++|+|+..|++|+++.+    ++++.+.++++|+++++|.. ..+ .+.+++
T Consensus       159 ~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~----~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~  233 (347)
T 2hcy_A          159 YKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG----GEGKEELFRSIGGEVFIDFTKEKDIVGAVLK  233 (347)
T ss_dssp             HHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC----STTHHHHHHHTTCCEEEETTTCSCHHHHHHH
T ss_pred             HHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC----CHHHHHHHHHcCCceEEecCccHhHHHHHHH
Confidence            999977 58999999999999999999999999999999998884    56677888899999999876 333 356777


Q ss_pred             HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064          255 LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI  333 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (378)
                      .+.+ + +|++||++|. ..++.++++++++|+++.+|.....+.++++..++.+++++.|+....          .+.+
T Consensus       234 ~~~~-~-~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~  301 (347)
T 2hcy_A          234 ATDG-G-AHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN----------RADT  301 (347)
T ss_dssp             HHTS-C-EEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCC----------HHHH
T ss_pred             HhCC-C-CCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCC----------HHHH
Confidence            7766 5 9999999998 667899999999999999996654445566677888999999976532          2567


Q ss_pred             HHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          334 DYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       334 ~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++++|++++.+++|||+++++||+.+.+++..| |+||++
T Consensus       302 ~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  345 (347)
T 2hcy_A          302 REALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVG-RYVVDT  345 (347)
T ss_dssp             HHHHHHHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSS-EEEEES
T ss_pred             HHHHHHHHhCCCccceEEEcHHHHHHHHHHHHcCCcce-eEEEec
Confidence            88999999999998888999999999999999988888 999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.9e-52  Score=394.63  Aligned_cols=319  Identities=20%  Similarity=0.252  Sum_probs=266.3

Q ss_pred             cCCcccceEEEcccCCCccceEEe-eeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      .+|.+||++++..+++    ++++ +.|.|++++|||+|||.++|||++|++.+.+.    ..+|.++|||++|+|+++|
T Consensus         7 ~~p~~mkA~v~~~~~~----l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE----VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCSCEEEEEECTTSC----EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC---------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCchhceeEEEcCCCc----eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCccccEEEEEEeC
Confidence            4788999999998865    8998 99999999999999999999999999988763    2468999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCC-------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH-hcc-------
Q 017064          122 SAVTRLAPGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF-TTL-------  186 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~-------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~-~~~-------  186 (378)
                      ++|++|++||||++...       ..|+|+||+++++++++++|+++++++|+++++++.|||+++.+. .++       
T Consensus        79 ~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  158 (371)
T 3gqv_A           79 SDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQ  158 (371)
T ss_dssp             TTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSS
T ss_pred             CCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcccc
Confidence            99999999999998762       269999999999999999999999999999999999999999886 443       


Q ss_pred             ----CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCC
Q 017064          187 ----NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPE  261 (378)
Q Consensus       187 ----~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~  261 (378)
                          ++|++|||+|++|++|++++|+|+++|++|++++     +++|+++++++|+++++|+++.+ .+.+++++++  +
T Consensus       159 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g--~  231 (371)
T 3gqv_A          159 PPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKN--N  231 (371)
T ss_dssp             CCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTT--C
T ss_pred             ccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccC--C
Confidence                8999999999999999999999999999999887     56788899999999999998765 4678888877  4


Q ss_pred             CcEEEeCCCC-ccHHHHHHhc-ccCCEEEEEecCCCC-----Ccccc---chhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          262 PALGFNCVGG-NSASKVLKFL-SQGGTMVTYGGMSKK-----PITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       262 ~Dvvid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      +|++|||+|+ ..+..+++++ +++|+++.+|.....     +...+   ...++.+++++.|++.... .....+...+
T Consensus       232 ~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~-~~~~~~~~~~  310 (371)
T 3gqv_A          232 LRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPG-SEEERQFGED  310 (371)
T ss_dssp             CCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCC-CHHHHHHHHH
T ss_pred             ccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccc-cHHHHHHHHH
Confidence            9999999999 4578899999 599999999855431     12221   2356778999888643321 1122234556


Q ss_pred             HHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064          332 MIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK  377 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~  377 (378)
                      .++++++++++|++++.   ++.|+|+++++||+.+.+++..|.|+|++
T Consensus       311 ~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~  359 (371)
T 3gqv_A          311 LWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVR  359 (371)
T ss_dssp             HHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             HHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEE
Confidence            67799999999999986   34599999999999999999998667665

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=5.4e-53  Score=391.06  Aligned_cols=308  Identities=24%  Similarity=0.326  Sum_probs=263.8

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhccc--CC--CCCCCCccCCCceeEEEEEe
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV--YP--VRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~--~~--~~~~~p~~~G~e~~G~V~~v  120 (378)
                      +.+||++++..++.+.. +++++.|.|++++|||+|||.++|||++|++.+.|.  .+  ...++|.++|||++|+|+++
T Consensus         4 m~~Mka~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKV-LKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             -CEEEEEEESSSCSGGG-EEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             cccceEEEEccCCCcce-eEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            35799999999988755 899999999999999999999999999999999882  11  12357999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCC---CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCC
Q 017064          121 GSAVTRLAPGDWVIPSP---PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA  197 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~---~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~  197 (378)
                      |++|++|++||||++..   ...|+|+||++++++.++++|+++++++||+++++++|||+++ +.+++++|++|||+|+
T Consensus        83 G~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga  161 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAG  161 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcC
Confidence            99999999999999875   3369999999999999999999999999999999999999999 6699999999999998


Q ss_pred             CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHH
Q 017064          198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASK  276 (378)
Q Consensus       198 ~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~  276 (378)
                      +|++|++++|+|+++|++|++++     ++++.++++++|+++++|+++.+ ..+   ..  . ++|++|||+|++....
T Consensus       162 ~G~vG~~a~q~a~~~Ga~vi~~~-----~~~~~~~~~~lGa~~~i~~~~~~~~~~---~~--~-g~D~v~d~~g~~~~~~  230 (321)
T 3tqh_A          162 AGGVGHLAIQLAKQKGTTVITTA-----SKRNHAFLKALGAEQCINYHEEDFLLA---IS--T-PVDAVIDLVGGDVGIQ  230 (321)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEE-----CHHHHHHHHHHTCSEEEETTTSCHHHH---CC--S-CEEEEEESSCHHHHHH
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEe-----ccchHHHHHHcCCCEEEeCCCcchhhh---hc--c-CCCEEEECCCcHHHHH
Confidence            89999999999999999999887     45668899999999999988754 322   11  2 4999999999988899


Q ss_pred             HHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccc
Q 017064          277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFN  355 (378)
Q Consensus       277 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~  355 (378)
                      ++++++++|+++.+|....   ......+..+++++.++....         ..+.++++++++++|++++.+ ++|+|+
T Consensus       231 ~~~~l~~~G~iv~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~g~l~~~i~~~~~l~  298 (321)
T 3tqh_A          231 SIDCLKETGCIVSVPTITA---GRVIEVAKQKHRRAFGLLKQF---------NIEELHYLGKLVSEDKLRIEISRIFQLS  298 (321)
T ss_dssp             HGGGEEEEEEEEECCSTTH---HHHHHHHHHTTCEEECCCCCC---------CHHHHHHHHHHHHTTSSCCCEEEEECGG
T ss_pred             HHHhccCCCEEEEeCCCCc---hhhhhhhhhcceEEEEEecCC---------CHHHHHHHHHHHHCCCcccccccEEcHH
Confidence            9999999999999874321   112234567888888853211         135688899999999999875 589999


Q ss_pred             cHHHHHHHHHccCCCCCceEeeC
Q 017064          356 NFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       356 ~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++||+.+.+++..| |+||++
T Consensus       299 ~~~~A~~~~~~~~~~g-Kvvl~~  320 (321)
T 3tqh_A          299 EAVTAHELLETGHVRG-KLVFKV  320 (321)
T ss_dssp             GHHHHHHHHHTTCCCS-EEEEEC
T ss_pred             HHHHHHHHHHcCCCCc-eEEEEe
Confidence            9999999999999999 999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-52  Score=385.42  Aligned_cols=322  Identities=22%  Similarity=0.290  Sum_probs=276.7

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      +||++++..++.+.. +++.+.|.|.++++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         1 ~Mka~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            1 MATRIEFHKHGGPEV-LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             -CEEEEBSSCCSGGG-CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             CcEEEEEcCCCChhh-eEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCCCceeEEEEEEECCCCCC
Confidence            389999998887654 889999999999999999999999999999999987643 257999999999999999999999


Q ss_pred             CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av  206 (378)
                      |++||||.......|+|+||+++|++.++++|+++++++||+++.+++|||+++.+.+++++|++|||+|++|++|++++
T Consensus        79 ~~~GdrV~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~  158 (327)
T 1qor_A           79 IKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC  158 (327)
T ss_dssp             CCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHH
T ss_pred             CCCCCEEEECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHH
Confidence            99999994331235999999999999999999999999999999999999999987789999999999999999999999


Q ss_pred             HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                      |+|+..|++|++++    .++++.+.++++|++++++..+.+ .+.+.+.+.+.+ +|++|||+|...++.++++++++|
T Consensus       159 ~~a~~~G~~V~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~D~vi~~~g~~~~~~~~~~l~~~G  233 (327)
T 1qor_A          159 QWAKALGAKLIGTV----GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKK-VRVVYDSVGRDTWERSLDCLQRRG  233 (327)
T ss_dssp             HHHHHHTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCC-EEEEEECSCGGGHHHHHHTEEEEE
T ss_pred             HHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhcCCC
Confidence            99999999999988    478888899999999999887654 466777776655 999999999888899999999999


Q ss_pred             EEEEEecCCCCCccccchhhhhc-CceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc---eeeccccHHHHH
Q 017064          286 TMVTYGGMSKKPITVSTSAFIFK-DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM---ELVPFNNFQTAL  361 (378)
Q Consensus       286 ~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~---~~~~l~~~~~a~  361 (378)
                      +++.+|........++...++.+ ++++.+.....+..  .+....+.++++++++++|++++.+   ++|+|+++++|+
T Consensus       234 ~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~  311 (327)
T 1qor_A          234 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYIT--TREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAH  311 (327)
T ss_dssp             EEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCC--SHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHH
T ss_pred             EEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcC--CHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHH
Confidence            99999966544345666677777 88887665433321  2344567899999999999999864   589999999999


Q ss_pred             HHHHccCCCCCceEeeC
Q 017064          362 SKALGLHGSQPKQVIKF  378 (378)
Q Consensus       362 ~~~~~~~~~g~kvvv~~  378 (378)
                      +.+.+++..| |+|+++
T Consensus       312 ~~~~~~~~~g-Kvvl~~  327 (327)
T 1qor_A          312 EILESRATQG-SSLLIP  327 (327)
T ss_dssp             HHHHTTCCCB-CCEEEC
T ss_pred             HHHHhCCCCc-eEEEeC
Confidence            9999988888 999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4e-52  Score=393.52  Aligned_cols=314  Identities=22%  Similarity=0.310  Sum_probs=269.2

Q ss_pred             ccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        42 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      +..|.+||++++..++.+   +++++.|.|+++++||+|||.++|||++|++.+.|. +. .++|.++|||++|+|+++|
T Consensus         3 ~~~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~-~~~P~v~GhE~~G~V~~vG   77 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KK-ALFPVVLGHECAGIVESVG   77 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SC-CCSSBCCCCEEEEEEEEEC
T ss_pred             CCCChheeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CC-CCCCcccCccccEEEEEEC
Confidence            346778999999988754   788899999999999999999999999999999886 32 3579999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCC---------------------------------------------------CCcccccceecc
Q 017064          122 SAVTRLAPGDWVIPSPP---------------------------------------------------SSGTWQSYVVKD  150 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~---------------------------------------------------~~G~~~~~~~~~  150 (378)
                      ++|++|++||||++.+.                                                   ..|+|+||+++|
T Consensus        78 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  157 (376)
T 1e3i_A           78 PGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVS  157 (376)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             CCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEec
Confidence            99999999999987531                                                   138999999999


Q ss_pred             CCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHH
Q 017064          151 QSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEA  229 (378)
Q Consensus       151 ~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~  229 (378)
                      ++.++++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .++++
T Consensus       158 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~  232 (376)
T 1e3i_A          158 EANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAID----INGEK  232 (376)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGG
T ss_pred             cccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHH
Confidence            99999999999999999999999999999988789999999999997 9999999999999999 677776    47888


Q ss_pred             HHHHHhCCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCCCccccchh
Q 017064          230 KEKLKGLGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKKPITVSTSA  304 (378)
Q Consensus       230 ~~~~~~~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~  304 (378)
                      +++++++|+++++++++  . ..+.+++++++ + +|+||||+|. ..++.++++++++ |+++.+|. ...+..+++..
T Consensus       233 ~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~-g-~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~-~~~~~~~~~~~  309 (376)
T 1e3i_A          233 FPKAKALGATDCLNPRELDKPVQDVITELTAG-G-VDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA-KVDEMTIPTVD  309 (376)
T ss_dssp             HHHHHHTTCSEEECGGGCSSCHHHHHHHHHTS-C-BSEEEESSCCHHHHHHHHHTBCTTTCEEEECCC-SSSEEEEEHHH
T ss_pred             HHHHHHhCCcEEEccccccchHHHHHHHHhCC-C-ccEEEECCCCHHHHHHHHHHhhcCCCEEEEECC-CCCccccCHHH
Confidence            89999999999999874  2 34668888876 4 9999999998 5678999999999 99999996 33345566667


Q ss_pred             hhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          305 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++.++ ++.|+....+       ...+.++++++++++|++++.   .++|||+++++||+.+.+++ .+ |+||+|
T Consensus       310 ~~~~~-~i~g~~~~~~-------~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-Kvvi~~  376 (376)
T 1e3i_A          310 VILGR-SINGTFFGGW-------KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SI-RTILTF  376 (376)
T ss_dssp             HHTTC-EEEECSGGGC-------CHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CS-EEEEEC
T ss_pred             hhccC-eEEEEecCCC-------CcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cc-eEEEeC
Confidence            77788 9998765432       023568889999999999852   46899999999999998877 45 999986

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.6e-52  Score=389.07  Aligned_cols=314  Identities=28%  Similarity=0.342  Sum_probs=274.1

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+.. +++++.|.|.++++||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|++|++|
T Consensus         1 Mka~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   79 (343)
T 2eih_A            1 MRAVVMRARGGPEV-LEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGF   79 (343)
T ss_dssp             CEEEEECSSSSGGG-EEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSC
T ss_pred             CeEEEEecCCCCce-EEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCC
Confidence            79999999887643 88999999999999999999999999999999998765433679999999999999999999999


Q ss_pred             CCCCEEeeC--------------------------CCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064          128 APGDWVIPS--------------------------PPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (378)
Q Consensus       128 ~~Gd~V~~~--------------------------~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~  181 (378)
                      ++||||+..                          ....|+|+||+++|++.++++|+++++++|++++.++.|||+++.
T Consensus        80 ~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~  159 (343)
T 2eih_A           80 APGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVV  159 (343)
T ss_dssp             CTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHH
Confidence            999999932                          112599999999999999999999999999999999999999998


Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP  260 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g  260 (378)
                      +.+++++|++|||+|++|++|++++|+|++.|++|++++    .++++.+.++++|+++++++.+.+ .+.+.+.+++.+
T Consensus       160 ~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~----~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          160 DKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATA----GSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             TTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTC
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCC
Confidence            767999999999999999999999999999999999988    478888999999999999887654 356777776544


Q ss_pred             CCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064          261 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA  340 (378)
Q Consensus       261 ~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (378)
                       +|++||++|...++.++++++++|+++.+|........++...++.+++++.|+....          .+.++++++++
T Consensus       236 -~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~l~  304 (343)
T 2eih_A          236 -ADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMAS----------KSRLFPILRFV  304 (343)
T ss_dssp             -EEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCC----------GGGHHHHHHHH
T ss_pred             -ceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCcc----------HHHHHHHHHHH
Confidence             9999999998888999999999999999996654433466677888999999875321          25578899999


Q ss_pred             HcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          341 REGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       341 ~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++|++++.+ ++|+|+++++||+.+.+++..| |+|+++
T Consensus       305 ~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  342 (343)
T 2eih_A          305 EEGKLKPVVGQVLPLEAAAEGHRLLEERRVFG-KVVLQV  342 (343)
T ss_dssp             HHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSS-EEEEEC
T ss_pred             HcCCCCCceeEEeeHHHHHHHHHHHHcCCCce-EEEEec
Confidence            999999875 6899999999999999888888 999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=8.2e-53  Score=407.49  Aligned_cols=322  Identities=17%  Similarity=0.179  Sum_probs=276.3

Q ss_pred             cccCCcccceEEEcccC------------CCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhccc----------
Q 017064           41 SALMSPPSKAVVYEREG------------PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV----------   98 (378)
Q Consensus        41 ~~~~~~~~~a~~~~~~~------------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~----------   98 (378)
                      ...+|.+||++++..++            ++.+.+++++.|.|+++++||+|||.++|||++|++...+.          
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            44589999999999872            11234899999999999999999999999999998764321          


Q ss_pred             ---C---CCCCCCC-ccCCCceeEEEEEecCCCCCCCCCCEEeeCCC--------------------------CCccccc
Q 017064           99 ---Y---PVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQS  145 (378)
Q Consensus        99 ---~---~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~  145 (378)
                         .   ....++| .++|||++|+|+++|++|++|++||+|++.+.                          .+|+|+|
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  183 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAE  183 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBS
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccc
Confidence               1   1112457 68999999999999999999999999997531                          1499999


Q ss_pred             ceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH--hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       146 ~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      |+++++++++++|+++++++||+++++++|||+++...  +++++|++|||+|++|++|++++|+|+++|++|++++   
T Consensus       184 y~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~---  260 (456)
T 3krt_A          184 IALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV---  260 (456)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---
T ss_pred             eEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE---
Confidence            99999999999999999999999999999999999754  7899999999999999999999999999999999988   


Q ss_pred             CCcHHHHHHHHhCCCcEEEccCccc------------------HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064          224 AGSDEAKEKLKGLGADEVFTESQLE------------------VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG  285 (378)
Q Consensus       224 ~~~~~~~~~~~~~ga~~vi~~~~~~------------------~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G  285 (378)
                       .+++++++++++|+++++++.+.+                  .+.+++++++.+ +|+||||+|+..+..++++++++|
T Consensus       261 -~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g-~Dvvid~~G~~~~~~~~~~l~~~G  338 (456)
T 3krt_A          261 -SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGED-IDIVFEHPGRETFGASVFVTRKGG  338 (456)
T ss_dssp             -SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCC-EEEEEECSCHHHHHHHHHHEEEEE
T ss_pred             -CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCC-CcEEEEcCCchhHHHHHHHhhCCc
Confidence             478999999999999999887643                  267888888766 999999999988899999999999


Q ss_pred             EEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHH
Q 017064          286 TMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKA  364 (378)
Q Consensus       286 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~  364 (378)
                      +++.+|........++...++.+++++.|+....+          +.+.++++++++|++++.+ ++|+|+++++|++.+
T Consensus       339 ~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l  408 (456)
T 3krt_A          339 TITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY----------REAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDV  408 (456)
T ss_dssp             EEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCH----------HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHH
T ss_pred             EEEEEecCCCcccccCHHHHHhcCeEEEEeccCCH----------HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHH
Confidence            99999976655556777778889999999876533          3345689999999999875 689999999999999


Q ss_pred             HccCCCCCceEeeC
Q 017064          365 LGLHGSQPKQVIKF  378 (378)
Q Consensus       365 ~~~~~~g~kvvv~~  378 (378)
                      .+++..| |+||.+
T Consensus       409 ~~~~~~G-Kvvv~~  421 (456)
T 3krt_A          409 HRNLHQG-KVGVLC  421 (456)
T ss_dssp             HTTCSSS-EEEEES
T ss_pred             HhCCCCC-cEEEEe
Confidence            9999999 999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=7.6e-52  Score=386.12  Aligned_cols=307  Identities=24%  Similarity=0.325  Sum_probs=269.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++...++|.++|||++|+|+++|++|++|
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~   77 (339)
T 1rjw_A            1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHL   77 (339)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcC
Confidence            799999988854   78899999999999999999999999999999998766444679999999999999999999999


Q ss_pred             CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||||++.+                           ...|+|+||+++|++.++++|+++++++||+++++++|||+++
T Consensus        78 ~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           78 KVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            9999998642                           1258999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~  259 (378)
                      .. .++++|++|||+|+ |++|++++|+|+++|++|++++    .++++.+.++++|+++++++.+.+ .+.+++.+ + 
T Consensus       158 ~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~-~-  229 (339)
T 1rjw_A          158 KV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD----IGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-G-  229 (339)
T ss_dssp             HH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH-S-
T ss_pred             Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh-C-
Confidence            87 58999999999999 8899999999999999999887    478899999999999999887554 35676766 3 


Q ss_pred             CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                       ++|++||++|. ..++.++++++++|+++.+|.... +..+++..++.+++++.|+....          .+.++++++
T Consensus       230 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~  297 (339)
T 1rjw_A          230 -GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGT----------RKDLQEALQ  297 (339)
T ss_dssp             -SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCC----------HHHHHHHHH
T ss_pred             -CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC-CCccCHHHHHhCCcEEEEeccCC----------HHHHHHHHH
Confidence             49999999998 667899999999999999986543 34566667788999999976432          256788999


Q ss_pred             HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++|++++.+++|+|+++++||+.+.+++..| |+||++
T Consensus       298 l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  336 (339)
T 1rjw_A          298 FAAEGKVKTIIEVQPLEKINEVFDRMLKGQING-RVVLTL  336 (339)
T ss_dssp             HHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSS-EEEEEC
T ss_pred             HHHcCCCCccEEEEcHHHHHHHHHHHHcCCCce-EEEEec
Confidence            999999999888999999999999999988888 999975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=4.7e-52  Score=392.60  Aligned_cols=312  Identities=21%  Similarity=0.261  Sum_probs=267.8

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      ..|.+||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++  ..+|.++|||++|+|+++|+
T Consensus         5 ~~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            5 GKDITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             TSCEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECT
T ss_pred             CCcceeEEEEEEcCCCC---eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECC
Confidence            46778999999988754   78899999999999999999999999999999998765  35799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceE
Q 017064          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~  155 (378)
                      +|++|++||||++.+.                                               ..|+|+||+++|+++++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVA  159 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEE
Confidence            9999999999987531                                               13899999999999999


Q ss_pred             EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH
Q 017064          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (378)
Q Consensus       156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (378)
                      ++|++++++ ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .+++++++++
T Consensus       160 ~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~  233 (373)
T 1p0f_A          160 KIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG----THKDKFPKAI  233 (373)
T ss_dssp             EECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC----SCGGGHHHHH
T ss_pred             ECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHH
Confidence            999999999 99999999999999988899999999999997 9999999999999999 677776    4788889999


Q ss_pred             hCCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhc
Q 017064          235 GLGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFK  308 (378)
Q Consensus       235 ~~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~  308 (378)
                      ++|+++++++++  . ..+.+++++++ + +|+||||+|. ..++.++++++++ |+++.+|.... .+..+++..++.+
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~i~~~t~g-g-~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  311 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPIYEVICEKTNG-G-VDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG  311 (373)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTT
T ss_pred             HcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccC
Confidence            999999999874  2 34668888876 4 9999999998 5678999999999 99999996543 2345666667677


Q ss_pred             CceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          309 DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      + ++.|+....+    .+    +.++++++++++|++++.   .++|||+++++||+.+.+++. + |+||+|
T Consensus       312 ~-~i~g~~~~~~----~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kvvi~~  373 (373)
T 1p0f_A          312 R-SLKGSVFGGF----KG----EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-V-RSIMIY  373 (373)
T ss_dssp             C-EEEECSGGGC----CG----GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-S-EEEEEC
T ss_pred             c-eEEeeccCCc----CH----HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-c-eEEEeC
Confidence            7 9988865432    11    457889999999999853   468999999999999987774 5 999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8e-52  Score=391.19  Aligned_cols=314  Identities=20%  Similarity=0.245  Sum_probs=269.6

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhh-hhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN-RIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      ..|.+||++++..++++   +++++.|.|+++++||+|||.++|||++|++ .+.|.++  .++|.++|||++|+|+++|
T Consensus         4 ~~~~~mka~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG   78 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVG   78 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEEC
T ss_pred             CCcceeEEEEEecCCCC---eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEEC
Confidence            35678999999988764   7888999999999999999999999999999 8888765  3579999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCce
Q 017064          122 SAVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVW  154 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~  154 (378)
                      ++|++|++||||++.+.                                               ..|+|+||+++|++++
T Consensus        79 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (374)
T 1cdo_A           79 PGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAV  158 (374)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGE
T ss_pred             CCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhhe
Confidence            99999999999987531                                               1389999999999999


Q ss_pred             EEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH
Q 017064          155 HKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL  233 (378)
Q Consensus       155 ~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~  233 (378)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .++++++++
T Consensus       159 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~  233 (374)
T 1cdo_A          159 AKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVD----LNPDKFEKA  233 (374)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHH
T ss_pred             EECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHH
Confidence            9999999999999999999999999988799999999999997 9999999999999999 677776    478888999


Q ss_pred             HhCCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCCCccccchhhhhc
Q 017064          234 KGLGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKKPITVSTSAFIFK  308 (378)
Q Consensus       234 ~~~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  308 (378)
                      +++|+++++++.+  . ..+.+++.+++ + +|+|||++|. ..++.++++++++ |+++.+|.....+.++++..++.+
T Consensus       234 ~~lGa~~vi~~~~~~~~~~~~~~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  311 (374)
T 1cdo_A          234 KVFGATDFVNPNDHSEPISQVLSKMTNG-G-VDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAG  311 (374)
T ss_dssp             HHTTCCEEECGGGCSSCHHHHHHHHHTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTT
T ss_pred             HHhCCceEEeccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcC
Confidence            9999999998874  2 34567777776 4 9999999998 5678999999999 999999965443455666667778


Q ss_pred             CceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          309 DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      + ++.|+.+..+.       ..+.++++++++++|++++  . .++|||+|+++||+.+++++. + |+||+|
T Consensus       312 ~-~i~g~~~~~~~-------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kvvi~~  374 (374)
T 1cdo_A          312 R-TWKGSMFGGFK-------GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-I-RTVLSL  374 (374)
T ss_dssp             C-EEEECSGGGCC-------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-S-EEEEEC
T ss_pred             C-eEEEEecCCCC-------cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-e-EEEEeC
Confidence            8 99988654321       2356888999999999985  2 468999999999999998774 5 999986

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.2e-52  Score=391.50  Aligned_cols=313  Identities=22%  Similarity=0.271  Sum_probs=270.4

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +.+||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|++|
T Consensus         4 ~~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~~v   78 (371)
T 1f8f_A            4 LKDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNV   78 (371)
T ss_dssp             CEEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTC
T ss_pred             cccceEEEEcCCCCC---eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCCC--CCCcccCcccceEEEEeCCCC
Confidence            446999999988754   788999999999999999999999999999999987652  579999999999999999999


Q ss_pred             CCCCCCCEEeeCC------------------------------------------------CCCcccccceeccCCceEE
Q 017064          125 TRLAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       125 ~~~~~Gd~V~~~~------------------------------------------------~~~G~~~~~~~~~~~~~~~  156 (378)
                      ++|++||||++.+                                                ...|+|+||++++++++++
T Consensus        79 ~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~  158 (371)
T 1f8f_A           79 TELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  158 (371)
T ss_dssp             CSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence            9999999998632                                                0148999999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG  235 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~  235 (378)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .++++.+++++
T Consensus       159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~----~~~~~~~~a~~  233 (371)
T 1f8f_A          159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVD----IVESRLELAKQ  233 (371)
T ss_dssp             ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE----SCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHH
Confidence            99999999999999999999999987789999999999997 9999999999999999 577776    47889999999


Q ss_pred             CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceE
Q 017064          236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSL  312 (378)
Q Consensus       236 ~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~  312 (378)
                      +|+++++++++.+ .+.+++.+++ + +|+|||++|. ..++.++++++++|+++.+|.... .+..+++..++.+++++
T Consensus       234 lGa~~vi~~~~~~~~~~~~~~~~g-g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  311 (371)
T 1f8f_A          234 LGATHVINSKTQDPVAAIKEITDG-G-VNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTI  311 (371)
T ss_dssp             HTCSEEEETTTSCHHHHHHHHTTS-C-EEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEE
T ss_pred             cCCCEEecCCccCHHHHHHHhcCC-C-CcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEE
Confidence            9999999987654 4678888877 5 9999999998 567899999999999999996542 23556777788899999


Q ss_pred             EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc--ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD--MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~--~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .|++...+    .   ..+.++++++++++|++++.  +..|||+|+++||+.+.+++. + |+||++
T Consensus       312 ~g~~~~~~----~---~~~~~~~~~~l~~~g~l~~~~~i~~~~l~~~~~A~~~~~~~~~-~-Kvvv~~  370 (371)
T 1f8f_A          312 LGVVEGSG----S---PKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGIT-L-KPIIKI  370 (371)
T ss_dssp             EECSGGGS----C---HHHHHHHHHHHHHTTSCCGGGGEEEEEGGGHHHHHHHHHHTSC-S-EEEEEC
T ss_pred             EEeCCCCC----c---hHHHHHHHHHHHHcCCCCcccceeEecHHHHHHHHHHHHCCCc-e-EEEEee
Confidence            99875432    1   23678899999999999863  333999999999999998775 6 999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.9e-52  Score=404.37  Aligned_cols=321  Identities=23%  Similarity=0.243  Sum_probs=273.9

Q ss_pred             cccCCcccceEEEcccC----------CCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhc--------------
Q 017064           41 SALMSPPSKAVVYEREG----------PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE--------------   96 (378)
Q Consensus        41 ~~~~~~~~~a~~~~~~~----------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~--------------   96 (378)
                      ...+|.+||++++..++          .+.+.+++++.|.|++++|||+|||.++|||++|++...              
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            34589999999999987          112238999999999999999999999999999985421              


Q ss_pred             --ccCCCCCCCC-ccCCCceeEEEEEecCCCCCCCCCCEEeeCCC--------------------------CCcccccce
Q 017064           97 --GVYPVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYV  147 (378)
Q Consensus        97 --g~~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~  147 (378)
                        |.++...++| .++|||++|+|+++|++|++|++||||++.+.                          ..|+|+||+
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~  177 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYG  177 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeee
Confidence              2222222456 69999999999999999999999999998641                          149999999


Q ss_pred             eccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH--hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC
Q 017064          148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG  225 (378)
Q Consensus       148 ~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~  225 (378)
                      ++++++++++|+++++++||+++++++|||+++...  +++++|++|||+|++|++|++++|+|++.|++|++++    .
T Consensus       178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~----~  253 (447)
T 4a0s_A          178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV----S  253 (447)
T ss_dssp             EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----S
T ss_pred             ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe----C
Confidence            999999999999999999999999999999999643  8899999999999999999999999999999999988    4


Q ss_pred             cHHHHHHHHhCCCcEEEccCccc-------------------HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064          226 SDEAKEKLKGLGADEVFTESQLE-------------------VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT  286 (378)
Q Consensus       226 ~~~~~~~~~~~ga~~vi~~~~~~-------------------~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~  286 (378)
                      ++++++.++++|+++++++.+.+                   .+.+++.+ +.+ +|++|||+|.+.++.++++++++|+
T Consensus       254 ~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g-~Dvvid~~G~~~~~~~~~~l~~~G~  331 (447)
T 4a0s_A          254 SAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GRE-PDIVFEHTGRVTFGLSVIVARRGGT  331 (447)
T ss_dssp             SHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSC-CSEEEECSCHHHHHHHHHHSCTTCE
T ss_pred             CHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCC-ceEEEECCCchHHHHHHHHHhcCCE
Confidence            78999999999999999875432                   46677777 544 9999999999888999999999999


Q ss_pred             EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHH
Q 017064          287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKAL  365 (378)
Q Consensus       287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~  365 (378)
                      ++.+|........++...++.+++++.|+....+          +.+.++++++++|++++.+ ++|+|+++++||+.+.
T Consensus       332 iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~  401 (447)
T 4a0s_A          332 VVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH----------EEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQ  401 (447)
T ss_dssp             EEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCH----------HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHH
T ss_pred             EEEEecCCCcccccCHHHHHhCCCEEEecCCCCH----------HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHh
Confidence            9999976555556677778889999999876432          3456789999999999875 6899999999999999


Q ss_pred             ccCCCCCceEeeC
Q 017064          366 GLHGSQPKQVIKF  378 (378)
Q Consensus       366 ~~~~~g~kvvv~~  378 (378)
                      +++..| |+||.+
T Consensus       402 ~~~~~G-Kvvv~~  413 (447)
T 4a0s_A          402 TSRQVG-KVAVLC  413 (447)
T ss_dssp             TTCCSS-EEEEES
T ss_pred             cCCCce-EEEEEe
Confidence            999999 998864

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.2e-51  Score=389.92  Aligned_cols=314  Identities=21%  Similarity=0.278  Sum_probs=269.4

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .|.+||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++. .++|.++|||++|+|+++|++
T Consensus         3 ~p~~mkA~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~   78 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEG   78 (373)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTT
T ss_pred             CccceEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEEEECCC
Confidence            4678999999988754   788899999999999999999999999999999987653 257999999999999999999


Q ss_pred             CCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEE
Q 017064          124 VTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~  156 (378)
                      |++|++||||++.+.                                               ..|+|+||+++|++.+++
T Consensus        79 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  158 (373)
T 2fzw_A           79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (373)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEE
Confidence            999999999987531                                               138999999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG  235 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~  235 (378)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++++++++
T Consensus       159 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~----~~~~~~~~~~~  233 (373)
T 2fzw_A          159 IDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD----INKDKFARAKE  233 (373)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC----SCGGGHHHHHH
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHH
Confidence            99999999999999999999999988799999999999997 9999999999999999 677776    47888899999


Q ss_pred             CCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcC
Q 017064          236 LGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKD  309 (378)
Q Consensus       236 ~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  309 (378)
                      +|+++++++++  . ..+.+++++++ + +|+||||+|. ..++.++++++++ |+++.+|.... .+.++++..++.++
T Consensus       234 lGa~~vi~~~~~~~~~~~~v~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  311 (373)
T 2fzw_A          234 FGATECINPQDFSKPIQEVLIEMTDG-G-VDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR  311 (373)
T ss_dssp             HTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC
T ss_pred             cCCceEeccccccccHHHHHHHHhCC-C-CCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC
Confidence            99999998874  2 34667787776 4 9999999998 5678999999999 99999996543 23456666677788


Q ss_pred             ceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          310 LSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                       ++.|+.+..+.       ..+.++++++++++|++++.   .++|||+++++||+.+.+++. + |+||+|
T Consensus       312 -~i~g~~~~~~~-------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kvvi~~  373 (373)
T 2fzw_A          312 -TWKGTAFGGWK-------SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-I-RTVVKI  373 (373)
T ss_dssp             -EEEECSGGGCC-------HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-S-EEEEEC
T ss_pred             -EEEEeccCCCC-------cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-c-eEEEeC
Confidence             99988654321       23568889999999999852   468999999999999988775 5 999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.9e-51  Score=388.65  Aligned_cols=314  Identities=21%  Similarity=0.280  Sum_probs=269.0

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      ..|.+||++++..++.+   +++++.|.|+++++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+
T Consensus         4 ~~~~~mkA~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~   78 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGE   78 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECT
T ss_pred             CCceeEEEEEEecCCCc---eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEEEECC
Confidence            35678999999988754   788899999999999999999999999999999987653  3799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceE
Q 017064          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~  155 (378)
                      +|++|++||||++.+.                                               ..|+|+||+++|++.++
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  158 (374)
T 2jhf_A           79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeE
Confidence            9999999999987531                                               13899999999999999


Q ss_pred             EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH
Q 017064          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (378)
Q Consensus       156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (378)
                      ++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++.++++
T Consensus       159 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~~  233 (374)
T 2jhf_A          159 KIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD----INKDKFAKAK  233 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHHH
T ss_pred             ECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHH
Confidence            999999999999999999999999988799999999999996 9999999999999999 677776    4788889999


Q ss_pred             hCCCcEEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhc
Q 017064          235 GLGADEVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFK  308 (378)
Q Consensus       235 ~~ga~~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~  308 (378)
                      ++|+++++++++  . ..+.+++.+++ + +|+|||++|. ..+..++++++++ |+++.+|.... ...++++..++.+
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~~~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  311 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPIQEVLTEMSNG-G-VDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSG  311 (374)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTT
T ss_pred             HhCCceEecccccchhHHHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcC
Confidence            999999998874  2 34567777776 4 9999999998 5678999999999 99999986543 2345666677778


Q ss_pred             CceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          309 DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      + ++.|+++..+.       ..+.++++++++++|++++.   .++|+|+++++|++.+.+++. + |+||+|
T Consensus       312 ~-~i~g~~~~~~~-------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-Kvvi~~  374 (374)
T 2jhf_A          312 R-TWKGAIFGGFK-------SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-I-RTILTF  374 (374)
T ss_dssp             C-EEEECSGGGCC-------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-S-EEEEEC
T ss_pred             C-eEEEeccCCCC-------hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-c-eEEEeC
Confidence            8 99988654321       23568889999999999852   468999999999999988774 5 999986

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.5e-51  Score=385.50  Aligned_cols=312  Identities=22%  Similarity=0.228  Sum_probs=264.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCC-CCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..++.    ++++|.|.|+ +++|||||||.++|||++|++.+.|..+.  ++|+++|||++|+|+++|++|++
T Consensus         1 MkAvv~~~~g~----l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~--~~P~i~G~E~~G~V~~vG~~V~~   74 (346)
T 4a2c_A            1 MKSVVNDTDGI----VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDD   74 (346)
T ss_dssp             CEEEEECSSSC----EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS--SSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCEEEEecCCC----EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC--CCCccccEEEEEEEEEECCCccc
Confidence            89999999886    8999999998 57999999999999999999999887654  58999999999999999999999


Q ss_pred             CCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       127 ~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      +++||+|++.+.                          .+|+|+||+++|+++++++|+++++++||+++  .+++++.+
T Consensus        75 ~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~--~~~~~~~~  152 (346)
T 4a2c_A           75 LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE--PITVGLHA  152 (346)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH--HHHHHHHH
T ss_pred             ccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch--HHHHHHHH
Confidence            999999987542                          25899999999999999999999999999876  45555555


Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~  259 (378)
                      ....++++|++|||+|+ |++|++++|+||++|++++++++   .+++|+++++++|+++++|+++.+. +.++.++++.
T Consensus       153 ~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~---~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~  228 (346)
T 4a2c_A          153 FHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID---ISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELR  228 (346)
T ss_dssp             HHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred             HHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEe---chHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccC
Confidence            56699999999999998 99999999999999998876665   4789999999999999999988765 4566677776


Q ss_pred             CCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCC--ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064          260 PEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL  336 (378)
Q Consensus       260 g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (378)
                      + +|+|+|++|.+ .++.++++++++|+++.+|......  ...+...++.|++++.|++......     ...+.++++
T Consensus       229 g-~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~-----~~~~~~~~~  302 (346)
T 4a2c_A          229 F-NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP-----WPGQEWETA  302 (346)
T ss_dssp             S-SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSS-----TTCHHHHHH
T ss_pred             C-cccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCc-----chHHHHHHH
Confidence            6 99999999975 5688999999999999999654432  2234456788999999986542211     123567889


Q ss_pred             HHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          337 LCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       337 ~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++++|++++.   .++|+|+++++|++.+++++..| |+||++
T Consensus       303 ~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~G-KvVl~P  346 (346)
T 4a2c_A          303 SRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPG-KVLLIP  346 (346)
T ss_dssp             HHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCS-EEEECC
T ss_pred             HHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCce-EEEEEC
Confidence            999999998653   36899999999999999999999 999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-51  Score=382.41  Aligned_cols=310  Identities=21%  Similarity=0.258  Sum_probs=262.6

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcc-cCCC-CCCCCccCCCceeEEEEEec
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-VYPV-RPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~~-~~~~p~~~G~e~~G~V~~vG  121 (378)
                      |+.+||++++..++.    +++++.|.|+++++||+|||.++|||++|++.+.+ ..+. ..++|.++|||++|+|+++|
T Consensus         1 m~~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG   76 (352)
T 1e3j_A            1 MASDNLSAVLYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVG   76 (352)
T ss_dssp             ---CCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEEC
T ss_pred             CcccCEEEEEEcCCc----EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeC
Confidence            456799999998664    88999999999999999999999999999998874 3321 12578999999999999999


Q ss_pred             CCCCCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064          122 SAVTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      ++|++|++||||++.+                           ...|+|+||+++++++++++|+++++++|+++ .++.
T Consensus        77 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~  155 (352)
T 1e3j_A           77 KNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLS  155 (352)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHH
T ss_pred             CCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHH
Confidence            9999999999998753                           12599999999999999999999999999876 4688


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc--ccHHHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKNV  252 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~--~~~~~i  252 (378)
                      |||+++ +.+++++|++|||+|+ |++|++++|+|+++|++|+++.    .++++.++++++|+++++++++  ...+.+
T Consensus       156 ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i  229 (352)
T 1e3j_A          156 VGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTA----RSPRRLEVAKNCGADVTLVVDPAKEEESSI  229 (352)
T ss_dssp             HHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSEEEECCTTTSCHHHH
T ss_pred             HHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCcccccHHHHH
Confidence            999999 5689999999999997 9999999999999999988777    4788999999999999999873  456778


Q ss_pred             HHHhc---CCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHH
Q 017064          253 KGLLA---NLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE  328 (378)
Q Consensus       253 ~~~~~---~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (378)
                      ++.++   +.+ +|++||++|.. .++.++++++++|+++.+|... .+.+++...++.+++++.|+...          
T Consensus       230 ~~~~~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~----------  297 (352)
T 1e3j_A          230 IERIRSAIGDL-PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS-QMVTVPLVNACAREIDIKSVFRY----------  297 (352)
T ss_dssp             HHHHHHHSSSC-CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS-SCCCCCHHHHHTTTCEEEECCSC----------
T ss_pred             HHHhccccCCC-CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccccHHHHHhcCcEEEEeccc----------
Confidence            88776   444 99999999986 5789999999999999998533 34556677788899999987542          


Q ss_pred             HHHHHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccC-CCCCceEeeC
Q 017064          329 CRNMIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLH-GSQPKQVIKF  378 (378)
Q Consensus       329 ~~~~~~~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~-~~g~kvvv~~  378 (378)
                       .+.++++++++++|++++  . .++|||+++++||+.+.+++ ..+ |+||++
T Consensus       298 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~-Kvvi~~  349 (352)
T 1e3j_A          298 -CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTI-KVMISC  349 (352)
T ss_dssp             -SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCS-EEEEEC
T ss_pred             -hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCce-EEEEec
Confidence             134778899999999763  3 36899999999999999888 577 999975

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.6e-51  Score=385.04  Aligned_cols=308  Identities=20%  Similarity=0.245  Sum_probs=262.7

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ++.+|+++....+.+   .+++.++|.|.+++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus         6 ~~m~~~a~~~~~~~~---~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~   81 (357)
T 2cf5_A            6 AERKTTGWAARDPSG---ILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_dssp             CCCEEEEEEECSTTC---CEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSS
T ss_pred             CcceeEEEEEccCCC---CcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCC
Confidence            345677777765433   2889999999999999999999999999999999887653 357999999999999999999


Q ss_pred             CCCCCCCCEEeeCC----------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhc
Q 017064          124 VTRLAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI  169 (378)
Q Consensus       124 v~~~~~Gd~V~~~~----------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~  169 (378)
                      |++|++||||++.+                                  ...|+|+||+++|++.++++|+++++++||++
T Consensus        82 v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l  161 (357)
T 2cf5_A           82 VSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPL  161 (357)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGG
T ss_pred             CCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhh
Confidence            99999999997532                                  13599999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHhccC-CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc
Q 017064          170 IVNPLTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL  247 (378)
Q Consensus       170 ~~~~~ta~~~l~~~~~~~-~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~  247 (378)
                      +++++|||+++.+ .+++ +|++|||+|+ |++|++++|+|+++|++|++++    .++++++.++ ++|+++++++++.
T Consensus       162 ~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~  235 (357)
T 2cf5_A          162 LCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVIS----SSNKKREEALQDLGADDYVIGSDQ  235 (357)
T ss_dssp             GTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSTTHHHHHHTTSCCSCEEETTCH
T ss_pred             hhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHHcCCceeeccccH
Confidence            9999999999976 7888 9999999997 9999999999999999999888    4677888887 9999999988753


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccH
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKA  326 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (378)
                        +.+++.++   ++|+||||+|.+ .++.++++++++|+++.+|........++.. ++.+++++.|++...       
T Consensus       236 --~~~~~~~~---g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~-------  302 (357)
T 2cf5_A          236 --AKMSELAD---SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGS-------  302 (357)
T ss_dssp             --HHHHHSTT---TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCC-------
T ss_pred             --HHHHHhcC---CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCC-------
Confidence              34555553   399999999985 6799999999999999998654322225555 788999999986532       


Q ss_pred             HHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          327 TECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       327 ~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         .+.++++++++++|++++.+++|||+++++||+.+.+++..| |+||++
T Consensus       303 ---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  350 (357)
T 2cf5_A          303 ---MKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRY-RFVVDV  350 (357)
T ss_dssp             ---HHHHHHHHHHHHHTTCCCCEEEEEGGGHHHHHHHHHTTCSSS-EEEEET
T ss_pred             ---HHHHHHHHHHHHcCCCCCceEEEeHHHHHHHHHHHHCCCCce-EEEEeC
Confidence               246788999999999998888999999999999999998888 999975

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.8e-52  Score=385.29  Aligned_cols=305  Identities=16%  Similarity=0.196  Sum_probs=248.2

Q ss_pred             CcccceEEEcc-cCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           45 SPPSKAVVYER-EGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        45 ~~~~~a~~~~~-~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +.|||++++.. ++.    +++++.|.|+++++||+|||.++|||++|++.+.|.++.. ++|.++|||++|+|+++|++
T Consensus         2 M~tMka~~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~   76 (315)
T 3goh_A            2 MEQHQVWAYQTKTHS----VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINW-SNGHVPGVDGAGVIVKVGAK   76 (315)
T ss_dssp             CCEEEEEEEETTTTE----EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCC-CTTCCCCSEEEEEEEEECTT
T ss_pred             CcceEEEEEeCCCCe----eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcC-CCCCEeeeeeEEEEEEeCCC
Confidence            35799999985 332    8999999999999999999999999999999999887643 68999999999999999999


Q ss_pred             CCCCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchH
Q 017064          124 VTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV  201 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~  201 (378)
                      |++|++||||++...  ..|+|+||+++|+++++++|+++++++||+++.+++|||+++ +.+++++|++|||+|+ |++
T Consensus        77 v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~v  154 (315)
T 3goh_A           77 VDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAV  154 (315)
T ss_dssp             SCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHH
T ss_pred             CCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHH
Confidence            999999999998752  259999999999999999999999999999999999999999 7799999999999999 999


Q ss_pred             HHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhc
Q 017064          202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL  281 (378)
Q Consensus       202 G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l  281 (378)
                      |++++|+||++|++|++++     ++++.++++++|++++++  +  .+++     +. ++|++|||+|++.+..+++++
T Consensus       155 G~~a~qlak~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v~~--d--~~~v-----~~-g~Dvv~d~~g~~~~~~~~~~l  219 (315)
T 3goh_A          155 NNLLTQMLNNAGYVVDLVS-----ASLSQALAAKRGVRHLYR--E--PSQV-----TQ-KYFAIFDAVNSQNAAALVPSL  219 (315)
T ss_dssp             HHHHHHHHHHHTCEEEEEC-----SSCCHHHHHHHTEEEEES--S--GGGC-----CS-CEEEEECC-------TTGGGE
T ss_pred             HHHHHHHHHHcCCEEEEEE-----ChhhHHHHHHcCCCEEEc--C--HHHh-----CC-CccEEEECCCchhHHHHHHHh
Confidence            9999999999999999887     456778899999999994  2  2333     33 499999999998888899999


Q ss_pred             ccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHH---HHHHHHHHHHHHHHcCCccccc-eeeccccH
Q 017064          282 SQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT---ECRNMIDYLLCLAREGKLKYDM-ELVPFNNF  357 (378)
Q Consensus       282 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~  357 (378)
                      +++|+++.+|.....    .....+.+++.+....+...+....+.   ...+.++++++++++|++++.+ ++|||+++
T Consensus       220 ~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  295 (315)
T 3goh_A          220 KANGHIICIQDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQM  295 (315)
T ss_dssp             EEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGH
T ss_pred             cCCCEEEEEeCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHH
Confidence            999999999743321    112234456666666654332212232   4567889999999999999875 68999999


Q ss_pred             HHHHHHHHccCCCCCceEeeC
Q 017064          358 QTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       358 ~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++||+.+.  +..| |+|+++
T Consensus       296 ~~A~~~~~--~~~g-Kvvi~~  313 (315)
T 3goh_A          296 IEALDHSE--QTKL-KTVLTL  313 (315)
T ss_dssp             HHHHHHHH--HHCC-CEEEES
T ss_pred             HHHHHHHH--hcCC-cEEEEe
Confidence            99999998  6677 999975

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=8.6e-52  Score=388.88  Aligned_cols=308  Identities=19%  Similarity=0.194  Sum_probs=265.7

Q ss_pred             CCcccceEEEcccCCCccceEEee--eCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIE--LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~--~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      +|.+||++++..++.+   +++.+  .|.|+++++||+|||.++|||++|++.+.|.++. .++|.++|||++|+|+++|
T Consensus         3 ~p~~mka~~~~~~~~~---l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~V~~vG   78 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDW---KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLG   78 (360)
T ss_dssp             TTTCEEEEEECCSSST---TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEEC
T ss_pred             CChheEEEEEecCCCC---eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEEEEEeC
Confidence            5678999999998754   66778  9999999999999999999999999999987653 2579999999999999999


Q ss_pred             CCCC-CCCCCCEEeeC--------------------------C--------CCCcccccceeccCCceEEcCCCCCHhhh
Q 017064          122 SAVT-RLAPGDWVIPS--------------------------P--------PSSGTWQSYVVKDQSVWHKVSKDSPMEYA  166 (378)
Q Consensus       122 ~~v~-~~~~Gd~V~~~--------------------------~--------~~~G~~~~~~~~~~~~~~~iP~~~~~~~a  166 (378)
                      ++|+ +|++||||+..                          .        ...|+|+||+++|+++++++|+++++++|
T Consensus        79 ~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  158 (360)
T 1piw_A           79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLA  158 (360)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHh
Confidence            9999 99999999432                          1        12589999999999999999999999999


Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      |++++++.|||+++.+ +++++|++|||+|+ |++|++++|+||++|++|++++    .+++++++++++|+++++++++
T Consensus       159 a~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~----~~~~~~~~~~~lGa~~v~~~~~  232 (360)
T 1piw_A          159 APLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVIS----RSSRKREDAMKMGADHYIATLE  232 (360)
T ss_dssp             GGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEEEEGGG
T ss_pred             hhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCCEEEcCcC
Confidence            9999999999999987 89999999999999 9999999999999999998888    4677888999999999998876


Q ss_pred             c-cHHHHHHHhcCCCCCcEEEeCCCC---ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhc
Q 017064          247 L-EVKNVKGLLANLPEPALGFNCVGG---NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLS  322 (378)
Q Consensus       247 ~-~~~~i~~~~~~~g~~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (378)
                      . +..  .++. +  ++|+|||++|.   ..++.++++++++|+++.+|.... ...++...++.+++++.|+....   
T Consensus       233 ~~~~~--~~~~-~--~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---  303 (360)
T 1piw_A          233 EGDWG--EKYF-D--TFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGS---  303 (360)
T ss_dssp             TSCHH--HHSC-S--CEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCC---
T ss_pred             chHHH--HHhh-c--CCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCC---
Confidence            4 422  1222 2  49999999998   667899999999999999996543 21466667888999999976532   


Q ss_pred             cccHHHHHHHHHHHHHHHHcCCccccceeecccc--HHHHHHHHHccCCCCCceEeeC
Q 017064          323 SEKATECRNMIDYLLCLAREGKLKYDMELVPFNN--FQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~--~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                             .+.++++++++++|++++.+++|+|++  +++||+.+.+++..| |+||++
T Consensus       304 -------~~~~~~~~~l~~~g~l~~~i~~~~l~~~~~~~A~~~~~~~~~~g-Kvvi~~  353 (360)
T 1piw_A          304 -------IKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRY-RFTLVG  353 (360)
T ss_dssp             -------HHHHHHHHHHHHHTTCCCCEEEEESSHHHHHHHHHHHHHTCCSS-EEEEEC
T ss_pred             -------HHHHHHHHHHHHhCCCcceEEEEeccHhHHHHHHHHHHCCCCce-EEEEec
Confidence                   256788999999999998888899999  999999999988888 999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.5e-51  Score=385.54  Aligned_cols=311  Identities=24%  Similarity=0.277  Sum_probs=265.5

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcc-cCC-CCCCCCccCCCceeEEEEEec
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-VYP-VRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      |+.+||++++..++..   +++++.|.|+++++||+|||.++|||++|++.+.| .++ ...++|.++|||++|+|+++|
T Consensus         1 ~m~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG   77 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYG---AELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIG   77 (348)
T ss_dssp             --CEEEEEEECSSSSS---CEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEEC
T ss_pred             CCCcceEEEEECCCCC---EEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEEC
Confidence            3567999999998842   88999999999999999999999999999999988 432 112578999999999999999


Q ss_pred             CCCCCCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHH
Q 017064          122 SAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t  175 (378)
                      ++|++|++||||++.+.                          ..|+|+||+++|+++++++|+++++++||+++ ++.|
T Consensus        78 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~t  156 (348)
T 2d8a_A           78 PGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGN  156 (348)
T ss_dssp             TTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHH
T ss_pred             CCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHH
Confidence            99999999999998641                          25999999999999999999999999999886 6889


Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~  253 (378)
                      ||+++ +.+++ +|++|||+|+ |++|++++|+|+++|+ +|++++    .++++.++++++|+++++++++.+ .+.++
T Consensus       157 a~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~  229 (348)
T 2d8a_A          157 AVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSE----PSDFRRELAKKVGADYVINPFEEDVVKEVM  229 (348)
T ss_dssp             HHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHTCSEEECTTTSCHHHHHH
T ss_pred             HHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCCcCHHHHHH
Confidence            99999 55889 9999999999 9999999999999999 899887    478899999999999999987654 46688


Q ss_pred             HHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHH
Q 017064          254 GLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRN  331 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (378)
                      +++++.+ +|+|||++|. ..++.++++++++|+++.+|.... +..++. ..++.+++++.|++...         ..+
T Consensus       230 ~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---------~~~  298 (348)
T 2d8a_A          230 DITDGNG-VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITGRH---------LWE  298 (348)
T ss_dssp             HHTTTSC-EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCCCC---------SHH
T ss_pred             HHcCCCC-CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CcccCchHHHHhCCcEEEEecCCC---------cHH
Confidence            8887766 9999999998 667899999999999999996543 455666 67788999999975431         135


Q ss_pred             HHHHHHHHHHcCCcc--ccc-eeec-cccHHHHHHHHHccCCCCCceEeeC
Q 017064          332 MIDYLLCLAREGKLK--YDM-ELVP-FNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       332 ~~~~~~~~l~~g~~~--~~~-~~~~-l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .++++++++++|+++  +.+ ++|+ |+++++|++.+++ +..| |+||++
T Consensus       299 ~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~g-Kvvi~~  347 (348)
T 2d8a_A          299 TWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTG-KVVFML  347 (348)
T ss_dssp             HHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCS-EEEEEC
T ss_pred             HHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCce-EEEEee
Confidence            678899999999964  434 6899 9999999999977 5677 999975

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=5.5e-52  Score=391.20  Aligned_cols=312  Identities=20%  Similarity=0.291  Sum_probs=266.1

Q ss_pred             cccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        41 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      ...+|.+||++++..++.    +++++.|.|++++|||+|||.++|||++|++.+.|.++.  ++|.++|||++|+|+++
T Consensus        17 ~~~~p~~mkA~v~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~p~v~G~e~~G~V~~v   90 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVGN----ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS--TPPVTLGHEFCGIVVEA   90 (370)
T ss_dssp             ----CCEEEEEEEEETTE----EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSEECCCSEEEEEEEE
T ss_pred             ccccchheEEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCC--CCCeecCcceEEEEEEE
Confidence            445888999999998864    899999999999999999999999999999999987643  57999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064          121 GSAVTRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~  174 (378)
                      |++|++|++||||++.+                          ...|+|+||++++++.++++|+++++++|| ++.++.
T Consensus        91 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~  169 (370)
T 4ej6_A           91 GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLA  169 (370)
T ss_dssp             CTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHH
Confidence            99999999999998743                          125999999999999999999999999998 556889


Q ss_pred             HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHH
Q 017064          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNV  252 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i  252 (378)
                      |||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++.++++++|+++++|+++.+. +.+
T Consensus       170 ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~~i  243 (370)
T 4ej6_A          170 CCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILST----RQATKRRLAEEVGATATVDPSAGDVVEAI  243 (370)
T ss_dssp             HHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCHHHHHHHHHHTCSEEECTTSSCHHHHH
T ss_pred             HHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCCCEEECCCCcCHHHHH
Confidence            999999 5599999999999998 9999999999999999 666665    4788999999999999999877654 566


Q ss_pred             HH---HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceEEEEechhhhccccHH
Q 017064          253 KG---LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKAT  327 (378)
Q Consensus       253 ~~---~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (378)
                      ++   ++++ | +|+||||+|. ..++.++++++++|+++.+|..... +.+++...++.+++++.|+....        
T Consensus       244 ~~~~~~~~g-g-~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--------  313 (370)
T 4ej6_A          244 AGPVGLVPG-G-VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP--------  313 (370)
T ss_dssp             HSTTSSSTT-C-EEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT--------
T ss_pred             HhhhhccCC-C-CCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh--------
Confidence            66   6666 4 9999999996 5679999999999999999965442 45677888899999999986532        


Q ss_pred             HHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          328 ECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       328 ~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         ..++++++++++|++++.   .++|||+++++|++.+.+++....|+|+++
T Consensus       314 ---~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          314 ---FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             ---TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             ---HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence               236889999999999653   468999999999999988875433888764

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3.6e-51  Score=383.63  Aligned_cols=309  Identities=19%  Similarity=0.211  Sum_probs=264.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhh-hhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN-RIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~  126 (378)
                      ||++++..+++    +++.+.|.|+++++||+|||.++|||++|++ .+.|..+.  ++|.++|||++|+|+++|++|++
T Consensus         1 MkA~~~~~~~~----~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--~~p~v~G~E~~G~V~~vG~~v~~   74 (352)
T 3fpc_A            1 MKGFAMLSIGK----VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE--RHNMILGHEAVGEVVEVGSEVKD   74 (352)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC--CSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEccCCC----ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC--CCCcccCCcceEEEEEECCCCCc
Confidence            79999999886    7889999999999999999999999999999 56787654  57999999999999999999999


Q ss_pred             CCCCCEEeeCC-----------------------------CCCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHH
Q 017064          127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT  175 (378)
Q Consensus       127 ~~~Gd~V~~~~-----------------------------~~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~t  175 (378)
                      |++||||++.+                             ..+|+|+||+++++.  +++++|+++++++|++++.++.|
T Consensus        75 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~t  154 (352)
T 3fpc_A           75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTT  154 (352)
T ss_dssp             CCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHH
T ss_pred             CCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHH
Confidence            99999999632                             126999999999976  89999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~  253 (378)
                      ||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .+++|+++++++|+++++++++.+ .+.++
T Consensus       155 a~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~  228 (352)
T 3fpc_A          155 GFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVG----SRKHCCDIALEYGATDIINYKNGDIVEQIL  228 (352)
T ss_dssp             HHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEEC----CCHHHHHHHHHHTCCEEECGGGSCHHHHHH
T ss_pred             HHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCceEEcCCCcCHHHHHH
Confidence            99999 4599999999999997 9999999999999999 788776    578899999999999999987765 46788


Q ss_pred             HHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-Cccccch--hhhhcCceEEEEechhhhccccHHHH
Q 017064          254 GLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVSTS--AFIFKDLSLKGFWLQKWLSSEKATEC  329 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (378)
                      +++++.| +|+||||+|+ ..++.++++++++|+++.+|..... ..+++..  .+..+++++.++....         .
T Consensus       229 ~~t~g~g-~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~  298 (352)
T 3fpc_A          229 KATDGKG-VDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG---------G  298 (352)
T ss_dssp             HHTTTCC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCC---------H
T ss_pred             HHcCCCC-CCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccC---------c
Confidence            8888876 9999999999 5679999999999999999965432 1222222  2335788888875421         1


Q ss_pred             HHHHHHHHHHHHcCCcccc---ceeec-cccHHHHHHHHHccCCCCCceEeeC
Q 017064          330 RNMIDYLLCLAREGKLKYD---MELVP-FNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       330 ~~~~~~~~~~l~~g~~~~~---~~~~~-l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+.++++++++++|++++.   .++|+ |+++++||+.+.+++....|+||++
T Consensus       299 ~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          299 RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            3458899999999999975   46899 9999999999998776623999985

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.6e-51  Score=384.83  Aligned_cols=307  Identities=20%  Similarity=0.256  Sum_probs=247.3

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-CCCCCccCCCceeEEEEEecCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-RPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      .+||++++..++.+   +++++.|.|+++++||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|++ 
T Consensus         2 ~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-   77 (344)
T 2h6e_A            2 VKSKAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-   77 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-
T ss_pred             ceeEEEEEecCCCC---CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-
Confidence            46999999988753   788899999999999999999999999999999987652 2257999999999999999999 


Q ss_pred             CCCCCCCEEeeCCC--------------------------CCcccccceecc-CCceEEcCCCCCHhhhhhccccHHHHH
Q 017064          125 TRLAPGDWVIPSPP--------------------------SSGTWQSYVVKD-QSVWHKVSKDSPMEYAATIIVNPLTAL  177 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~-~~~~~~iP~~~~~~~aa~~~~~~~ta~  177 (378)
                      ++|++||||++.+.                          ..|+|+||+++| +++++++ +++++++||+++++++|||
T Consensus        78 ~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~  156 (344)
T 2h6e_A           78 AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSM  156 (344)
T ss_dssp             CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHH
Confidence            99999999987541                          259999999999 9999999 9999999999999999999


Q ss_pred             HHHHHH----hccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-ccHH
Q 017064          178 RMLEDF----TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVK  250 (378)
Q Consensus       178 ~~l~~~----~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~~~~  250 (378)
                      +++...    +++ +|++|||+|+ |++|++++|+||++  |++|++++    .+++++++++++|+++++++++ .+  
T Consensus       157 ~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~--  228 (344)
T 2h6e_A          157 GAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGIS----RSKKHRDFALELGADYVSEMKDAES--  228 (344)
T ss_dssp             HHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEEC----SCHHHHHHHHHHTCSEEECHHHHHH--
T ss_pred             HHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEe----CCHHHHHHHHHhCCCEEeccccchH--
Confidence            999874    288 9999999999 99999999999999  99988887    4788999999999999998765 32  


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064          251 NVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC  329 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (378)
                      .+.+++++.+ +|+||||+|.+ .++.++++++++|+++.+|.... +..++...++.+++++.|+....          
T Consensus       229 ~~~~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------  296 (344)
T 2h6e_A          229 LINKLTDGLG-ASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-RVSLEAFDTAVWNKKLLGSNYGS----------  296 (344)
T ss_dssp             HHHHHHTTCC-EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHHHTTCEEEECCSCC----------
T ss_pred             HHHHhhcCCC-ccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC-CcccCHHHHhhCCcEEEEEecCC----------
Confidence            2445555544 99999999997 77999999999999999986543 44566677888999999976431          


Q ss_pred             HHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          330 RNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       330 ~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .+.++++++++++|++++.+++|+|+++++||+.+.+++..| |+||++
T Consensus       297 ~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~  344 (344)
T 2h6e_A          297 LNDLEDVVRLSESGKIKPYIIKVPLDDINKAFTNLDEGRVDG-RQVITP  344 (344)
T ss_dssp             HHHHHHHHHHHHTTSSCCCEEEECC----------------C-EEEECC
T ss_pred             HHHHHHHHHHHHcCCCCcceEEEeHHHHHHHHHHHHcCCCce-EEEEeC
Confidence            256888999999999998778899999999999999988888 999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.1e-52  Score=390.56  Aligned_cols=321  Identities=20%  Similarity=0.211  Sum_probs=268.0

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ||.+||++++..++.+.. +++++.|.|+++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++  +
T Consensus         1 m~~~mka~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~   77 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVS-VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--N   77 (330)
T ss_dssp             -CCEEEEEEECCGGGSCC-CEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--S
T ss_pred             CCCcceEEEEecCCCCcc-eeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--C
Confidence            467899999999875433 8899999999999999999999999999999999876544467999999999999996  4


Q ss_pred             CCCCCCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH--HhccCCCC-EEEEe
Q 017064          124 VTRLAPGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLNSGD-SIVQN  195 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlV~  195 (378)
                      +++|++||||++...     ..|+|+||+++|++.++++|+++++++||+++++++|||.++..  .+++++|+ +|||+
T Consensus        78 v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  157 (330)
T 1tt7_A           78 DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVT  157 (330)
T ss_dssp             STTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred             CCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEE
Confidence            688999999997531     25999999999999999999999999999999999999988753  36789996 99999


Q ss_pred             CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHH
Q 017064          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS  275 (378)
Q Consensus       196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~  275 (378)
                      |++|++|++++|+|+++|++|+++++    +++++++++++|+++++++++.+.+.+++++++  ++|++|||+|++.+.
T Consensus       158 Ga~G~vG~~~~q~a~~~Ga~vi~~~~----~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~--~~d~vid~~g~~~~~  231 (330)
T 1tt7_A          158 GATGGVGGIAVSMLNKRGYDVVASTG----NREAADYLKQLGASEVISREDVYDGTLKALSKQ--QWQGAVDPVGGKQLA  231 (330)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEES----SSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCC--CEEEEEESCCTHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCcEEEECCCchHHHHHHhhcC--CccEEEECCcHHHHH
Confidence            99999999999999999999999884    567788899999999998754321122333332  499999999998889


Q ss_pred             HHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeecc
Q 017064          276 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPF  354 (378)
Q Consensus       276 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l  354 (378)
                      .++++++++|+++.+|.....+.+++...++.+++++.|++....    ......+.++++.+++++|++++.+ ++|||
T Consensus       232 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l  307 (330)
T 1tt7_A          232 SLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYC----PMDVRAAVWERMSSDLKPDQLLTIVDREVSL  307 (330)
T ss_dssp             HHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSC----CHHHHHHHHHHTTTTSCCSCSTTSEEEEECS
T ss_pred             HHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEecccc----CHHHHHHHHHHHHHHHhcCCcccccceEEcH
Confidence            999999999999999976544455666677889999999753211    1223456788888899999998875 78999


Q ss_pred             ccHHHHHHHHHccCCCCCceEeeC
Q 017064          355 NNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       355 ~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++||+.+.+++..| |+||++
T Consensus       308 ~~~~~A~~~~~~~~~~g-Kvvi~~  330 (330)
T 1tt7_A          308 EETPGALKDILQNRIQG-RVIVKL  330 (330)
T ss_dssp             TTHHHHHHHTTTTCCSS-EEEECC
T ss_pred             HHHHHHHHHHHcCCCCC-eEEEeC
Confidence            99999999999998888 999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-52  Score=384.94  Aligned_cols=318  Identities=19%  Similarity=0.201  Sum_probs=263.3

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .+||++++..++.+.. +++++.|.|+++++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++  +++
T Consensus         2 ~~mka~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFT-AGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             CEEEEEEEEEETTEEE-EEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             CcceEEEEecCCCcce-eEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCC
Confidence            4699999999875433 8899999999999999999999999999999998876544457999999999999995  578


Q ss_pred             CCCCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH--HhccCCCC-EEEEeCC
Q 017064          126 RLAPGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLNSGD-SIVQNGA  197 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlV~g~  197 (378)
                      +|++||||++...     ..|+|+||+++|+++++++|+++++++|++++++++|||.++..  .+++++|+ +|||+|+
T Consensus        79 ~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga  158 (328)
T 1xa0_A           79 RFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGA  158 (328)
T ss_dssp             SCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESST
T ss_pred             CCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecC
Confidence            9999999997531     25999999999999999999999999999999999999988753  36789997 9999999


Q ss_pred             CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHH
Q 017064          198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV  277 (378)
Q Consensus       198 ~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~  277 (378)
                      +|++|++++|+|+++|++|++++    .+++++++++++|+++++++++.+.+.+++++++  ++|++|||+|++.+..+
T Consensus       159 ~G~vG~~~~q~a~~~Ga~vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~  232 (328)
T 1xa0_A          159 TGGVGSLAVSMLAKRGYTVEAST----GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQ--RWAAAVDPVGGRTLATV  232 (328)
T ss_dssp             TSHHHHHHHHHHHHTTCCEEEEE----SCTTCHHHHHHTTCSEEEECC---------CCSC--CEEEEEECSTTTTHHHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCC--cccEEEECCcHHHHHHH
Confidence            99999999999999999999988    4677888999999999998876432234444433  49999999999888999


Q ss_pred             HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccH
Q 017064          278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNF  357 (378)
Q Consensus       278 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~  357 (378)
                      +++++++|+++.+|.....+..++...++.+++++.|+.....    ......+.++++.+++++| +++.+++|+|+++
T Consensus       233 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~g-l~~~~~~~~l~~~  307 (328)
T 1xa0_A          233 LSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYC----PMDLRLRIWERLAGDLKPD-LERIAQEISLAEL  307 (328)
T ss_dssp             HHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSC----CHHHHHHHHHHHHTTTCCC-HHHHEEEEEGGGH
T ss_pred             HHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccC----CHHHHHHHHHHHHHHHHcC-CceeeeEeCHHHH
Confidence            9999999999999965544445566677889999999743211    1223456778888888888 8776788999999


Q ss_pred             HHHHHHHHccCCCCCceEeeC
Q 017064          358 QTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       358 ~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++||+.+.+++..| |+||++
T Consensus       308 ~~A~~~~~~~~~~g-Kvvv~~  327 (328)
T 1xa0_A          308 PQALKRILRGELRG-RTVVRL  327 (328)
T ss_dssp             HHHHHHHHHTCCCS-EEEEEC
T ss_pred             HHHHHHHHcCCCCC-eEEEEe
Confidence            99999999998888 999975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=5.4e-51  Score=384.07  Aligned_cols=309  Identities=21%  Similarity=0.237  Sum_probs=263.2

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCC--------CCCCCcEEEEEEeeccChhhhhhhcccC-CC-CCCCCccCCCc
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPV--------EVKENDVCVKMLAAPINPSDINRIEGVY-PV-RPKVPAVGGYE  112 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p--------~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e  112 (378)
                      .+|.+||++++..++.    +++++.|.|        +++++||+|||.++|||++|++.+.+.. +. ..++|.++|||
T Consensus         4 ~~~~~mka~~~~~~~~----l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHD----LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             -CCSCCEEEEECTTCC----EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCcccceeEEEeCCCc----EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            3677899999998765    899999999        9999999999999999999999887432 21 22579999999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhh
Q 017064          113 GVGEVYSVGSAVTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEY  165 (378)
Q Consensus       113 ~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~  165 (378)
                      ++|+|+++|++|++|++||||++.+                           ...|+|+||+++|+++++++|+ +++++
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~  158 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN  158 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence            9999999999999999999999753                           1369999999999999999999 99999


Q ss_pred             hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEcc
Q 017064          166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (378)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~  244 (378)
                      ||++. ++.|||+++ +.+++++|++|||+|+ |++|++++|+||++|++ |+++.    .+++|+++++++ +++++++
T Consensus       159 aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~l-~~~~~~~  230 (363)
T 3m6i_A          159 GAMLE-PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITD----IDEGRLKFAKEI-CPEVVTH  230 (363)
T ss_dssp             HHHHH-HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEE----SCHHHHHHHHHH-CTTCEEE
T ss_pred             HHhhh-HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHh-chhcccc
Confidence            99884 788999999 5599999999999998 99999999999999997 77776    588999999999 7666554


Q ss_pred             C------cccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          245 S------QLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       245 ~------~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      .      +...+.+++.+++.| +|+||||+|++ .++.++++++++|+++.+|... ....++...++.+++++.++..
T Consensus       231 ~~~~~~~~~~~~~v~~~t~g~g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~  308 (363)
T 3m6i_A          231 KVERLSAEESAKKIVESFGGIE-PAVALECTGVESSIAAAIWAVKFGGKVFVIGVGK-NEIQIPFMRASVREVDLQFQYR  308 (363)
T ss_dssp             ECCSCCHHHHHHHHHHHTSSCC-CSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCC-SCCCCCHHHHHHHTCEEEECCS
T ss_pred             cccccchHHHHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEEccCC-CCccccHHHHHhcCcEEEEccC
Confidence            3      223567888888766 99999999997 6799999999999999999543 3455677788899999999864


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCCccc--cc-eeeccccHHHHHHHHHcc-CCCCCceEeeC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGKLKY--DM-ELVPFNNFQTALSKALGL-HGSQPKQVIKF  378 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~~-~~~~l~~~~~a~~~~~~~-~~~g~kvvv~~  378 (378)
                      .           .+.++++++++++|++++  .+ ++|||+++++||+.+.++ ...+ |+||++
T Consensus       309 ~-----------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~-Kvvi~~  361 (363)
T 3m6i_A          309 Y-----------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAI-KVQIQS  361 (363)
T ss_dssp             C-----------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCS-EEEEEC
T ss_pred             C-----------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeE-EEEEec
Confidence            2           245778899999999954  33 689999999999999998 5666 999974

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.4e-51  Score=384.08  Aligned_cols=324  Identities=23%  Similarity=0.321  Sum_probs=273.9

Q ss_pred             hhccccCCcccceEEEcccCCC-ccceEE-eeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeE
Q 017064           38 RAFSALMSPPSKAVVYEREGPP-DSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVG  115 (378)
Q Consensus        38 ~~~~~~~~~~~~a~~~~~~~~~-~~~~~~-~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G  115 (378)
                      .++...++.+||++++..++++ .+.+++ ++.|.|.+++|||+|||.++|||++|++.+.|.++...++|.++|||++|
T Consensus        14 ~~~~~~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G   93 (362)
T 2c0c_A           14 GTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG   93 (362)
T ss_dssp             SHHHHHHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEE
T ss_pred             CcccccchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEE
Confidence            3444557788999999998753 123888 99999999999999999999999999999998765434679999999999


Q ss_pred             EEEEecCCCC-CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEE
Q 017064          116 EVYSVGSAVT-RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ  194 (378)
Q Consensus       116 ~V~~vG~~v~-~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV  194 (378)
                      +|+++|++|+ +|++||||++...  |+|+||++++++.++++|+. + .++++++.+++|||+++.+.+++++|++|||
T Consensus        94 ~V~~vG~~V~~~~~vGdrV~~~~~--G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV  169 (362)
T 2c0c_A           94 EVVALGLSASARYTVGQAVAYMAP--GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV  169 (362)
T ss_dssp             EEEEECTTGGGTCCTTCEEEEECS--CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE
T ss_pred             EEEEECCCccCCCCCCCEEEEccC--CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Confidence            9999999999 9999999998754  99999999999999999996 4 4677888899999999988889999999999


Q ss_pred             eCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCcc
Q 017064          195 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNS  273 (378)
Q Consensus       195 ~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~  273 (378)
                      +|++|++|++++|+|++.|++|++++    .++++.+.++++|+++++++++.+. +.+++.++ . ++|++|||+|...
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~-~-g~D~vid~~g~~~  243 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTC----SSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYP-E-GVDVVYESVGGAM  243 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCT-T-CEEEEEECSCTHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcC-C-CCCEEEECCCHHH
Confidence            99889999999999999999999888    4788999999999999999876554 45555553 3 4999999999988


Q ss_pred             HHHHHHhcccCCEEEEEecCCCCC--c--------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC
Q 017064          274 ASKVLKFLSQGGTMVTYGGMSKKP--I--------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       274 ~~~~~~~l~~~G~~v~~g~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      ++.++++++++|+++.+|......  .        .+ ...++.+++++.|++...+.     ....+.++++++++++|
T Consensus       244 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g  317 (362)
T 2c0c_A          244 FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYL-----SKYQAAMSHLLEMCVSG  317 (362)
T ss_dssp             HHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCG-----GGHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhh-----hhHHHHHHHHHHHHHCC
Confidence            899999999999999998654321  0        11 24567899999998765431     12356789999999999


Q ss_pred             Cccccc---------eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          344 KLKYDM---------ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       344 ~~~~~~---------~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++++.+         +.|+|+++++|++.+.+++..| |+|+++
T Consensus       318 ~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  360 (362)
T 2c0c_A          318 DLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTG-KIVVEL  360 (362)
T ss_dssp             CSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSB-EEEEEC
T ss_pred             CeEeeeccccccccccccCHHHHHHHHHHHHcCCCCc-eEEEEc
Confidence            999763         3479999999999999988888 999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.8e-51  Score=383.42  Aligned_cols=309  Identities=21%  Similarity=0.268  Sum_probs=260.6

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ...+|+++....+++.   +++++.|.|.++++||+|||.++|||++|++.+.|.++. .++|.++|||++|+|+++|++
T Consensus        19 ~~~~~~a~~~~~~~~~---l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~   94 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQ   94 (369)
T ss_dssp             ----CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTT
T ss_pred             cCceEEEEEEcCCCCC---cEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEEEECCC
Confidence            4456899988766543   889999999999999999999999999999999987553 257999999999999999999


Q ss_pred             CCCCCCCCEEeeCC-----------------------------------CCCcccccceeccCCceEEcCCC-CCHhhhh
Q 017064          124 VTRLAPGDWVIPSP-----------------------------------PSSGTWQSYVVKDQSVWHKVSKD-SPMEYAA  167 (378)
Q Consensus       124 v~~~~~Gd~V~~~~-----------------------------------~~~G~~~~~~~~~~~~~~~iP~~-~~~~~aa  167 (378)
                      |++|++||||++.+                                   ...|+|+||+++|++.++++|++ +++++||
T Consensus        95 V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa  174 (369)
T 1uuf_A           95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA  174 (369)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHG
T ss_pred             CCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhh
Confidence            99999999998532                                   12589999999999999999999 9999999


Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      +++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+++|++|++++    .+++++++++++|+++++++.+.
T Consensus       175 ~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~  248 (369)
T 1uuf_A          175 PLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFT----TSEAKREAAKALGADEVVNSRNA  248 (369)
T ss_dssp             GGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCSEEEETTCH
T ss_pred             hhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCcEEeccccH
Confidence            999999999999987 68999999999998 9999999999999999988888    47788889999999999988764


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccH
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKA  326 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (378)
                      +  .+.++. +  ++|+||||+|.+ .++.++++++++|+++.+|........++...++.+++++.|+....       
T Consensus       249 ~--~~~~~~-~--g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~-------  316 (369)
T 1uuf_A          249 D--EMAAHL-K--SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG-------  316 (369)
T ss_dssp             H--HHHTTT-T--CEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC-------
T ss_pred             H--HHHHhh-c--CCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCC-------
Confidence            3  223333 2  499999999986 68899999999999999986543212466667888999999976532       


Q ss_pred             HHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          327 TECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       327 ~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         .+.++++++++++|++++.+++|||+++++|++.+.+++..| |+|+++
T Consensus       317 ---~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  364 (369)
T 1uuf_A          317 ---IPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKY-RFVIDN  364 (369)
T ss_dssp             ---HHHHHHHHHHHHHHTCCCCEEEECGGGHHHHHHHHHTTCSSS-EEEEEG
T ss_pred             ---HHHHHHHHHHHHhCCCCcceEEEcHHHHHHHHHHHHcCCCce-EEEEec
Confidence               145788899999999998888899999999999999988888 999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2.4e-50  Score=378.41  Aligned_cols=306  Identities=23%  Similarity=0.271  Sum_probs=260.7

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC-CC-CCCCCccCCCceeEEEEEecCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-PV-RPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .+||++++..++.    +++++.|.|+++++||+|||.++|||++|++.+.|.. +. ..++|.++|||++|+|+++|++
T Consensus         6 ~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   81 (356)
T 1pl8_A            6 PNNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS   81 (356)
T ss_dssp             CCCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTT
T ss_pred             cCceEEEEecCCc----EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCC
Confidence            5699999998653    8899999999999999999999999999999887532 11 1246899999999999999999


Q ss_pred             CCCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064          124 VTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       124 v~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      |++|++||||++.+                           ...|+|+||+++|+++++++|+++++++|+++ .++.||
T Consensus        82 V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta  160 (356)
T 1pl8_A           82 VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVG  160 (356)
T ss_dssp             CCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHH
T ss_pred             CCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHH
Confidence            99999999999752                           12599999999999999999999999999876 468899


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccC----cccHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTES----QLEVKN  251 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~----~~~~~~  251 (378)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .+++++++++++|++++++++    ....+.
T Consensus       161 ~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~  234 (356)
T 1pl8_A          161 IHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTD----LSATRLSKAKEIGADLVLQISKESPQEIARK  234 (356)
T ss_dssp             HHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTTCSEEEECSSCCHHHHHHH
T ss_pred             HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCcccccchHHHH
Confidence            9999 5589999999999997 9999999999999999 788877    478899999999999999987    234567


Q ss_pred             HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064          252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      +++.++ .| +|+|||++|.+ .++.++++++++|+++.+|.. ..+..++...++.+++++.|+...           .
T Consensus       235 i~~~~~-~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~~~~~i~g~~~~-----------~  300 (356)
T 1pl8_A          235 VEGQLG-CK-PEVTIECTGAEASIQAGIYATRSGGTLVLVGLG-SEMTTVPLLHAAIREVDIKGVFRY-----------C  300 (356)
T ss_dssp             HHHHHT-SC-CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCC-CSCCCCCHHHHHHTTCEEEECCSC-----------S
T ss_pred             HHHHhC-CC-CCEEEECCCChHHHHHHHHHhcCCCEEEEEecC-CCCCccCHHHHHhcceEEEEeccc-----------H
Confidence            777776 34 99999999986 578999999999999999853 334556777788899999987542           1


Q ss_pred             HHHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          331 NMIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.++++++++++|++++  . .++|+|+++++||+.+.++ ..| |+||++
T Consensus       301 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~g-Kvvi~~  349 (356)
T 1pl8_A          301 NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGL-KIMLKC  349 (356)
T ss_dssp             SCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCS-EEEEEC
T ss_pred             HHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-Cce-EEEEeC
Confidence            34778899999999763  3 3689999999999999988 777 999975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-50  Score=381.61  Aligned_cols=310  Identities=21%  Similarity=0.305  Sum_probs=267.7

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +..+||++++..+++.   +++++.|.|+++++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++| +
T Consensus        14 ~~~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~P~v~GhE~~G~V~~vG-~   88 (380)
T 1vj0_A           14 MGLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVVEVN-G   88 (380)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEES-S
T ss_pred             hhhheEEEEEecCCCC---eEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCC-CCCCcccCcCcEEEEEEeC-C
Confidence            5568999999998832   888999999999999999999999999999999987652 2579999999999999999 9


Q ss_pred             CC------CCCCCCEEeeCC-----------------------------------CCCcccccceec-cCCceEEcCCCC
Q 017064          124 VT------RLAPGDWVIPSP-----------------------------------PSSGTWQSYVVK-DQSVWHKVSKDS  161 (378)
Q Consensus       124 v~------~~~~Gd~V~~~~-----------------------------------~~~G~~~~~~~~-~~~~~~~iP~~~  161 (378)
                      |+      +|++||||++.+                                   ...|+|+||+++ |++.++++|+++
T Consensus        89 V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l  168 (380)
T 1vj0_A           89 EKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKD  168 (380)
T ss_dssp             CCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTS
T ss_pred             ccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCC
Confidence            99      999999999742                                   125999999999 999999999999


Q ss_pred             CHh-hhhhccccHHHHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCC
Q 017064          162 PME-YAATIIVNPLTALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       162 ~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      +++ +|++++ ++.|||+++.. ++ +++|++|||+| +|++|++++|+|+++| ++|++++    .+++++++++++|+
T Consensus       169 ~~~~~Aa~~~-~~~ta~~al~~-~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~~~~lGa  241 (380)
T 1vj0_A          169 DLDVLAMAMC-SGATAYHAFDE-YPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIA----GSPNRLKLAEEIGA  241 (380)
T ss_dssp             CHHHHHHHTT-HHHHHHHHHHT-CSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEE----SCHHHHHHHHHTTC
T ss_pred             ChHHhHhhhc-HHHHHHHHHHh-cCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHcCC
Confidence            999 777776 89999999954 78 99999999999 5999999999999999 5999888    57899999999999


Q ss_pred             cEEEccC---ccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCC-CCCccccchh-hhhcCce
Q 017064          239 DEVFTES---QLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMS-KKPITVSTSA-FIFKDLS  311 (378)
Q Consensus       239 ~~vi~~~---~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-~~~~~~~  311 (378)
                      +++++++   +.+ .+.+++.+++.+ +|+||||+|. ..+..++++++++|+++.+|... ..+..++... ++.++++
T Consensus       242 ~~vi~~~~~~~~~~~~~v~~~~~g~g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  320 (380)
T 1vj0_A          242 DLTLNRRETSVEERRKAIMDITHGRG-ADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNAT  320 (380)
T ss_dssp             SEEEETTTSCHHHHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCE
T ss_pred             cEEEeccccCcchHHHHHHHHhCCCC-CcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeE
Confidence            9999987   543 467888887766 9999999997 46789999999999999999665 3345667777 8889999


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHc--CCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLARE--GKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.|++...          .+.++++++++++  |++++.+ ++|+|+++++||+.+.+++..  |+||++
T Consensus       321 i~g~~~~~----------~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~--Kvvl~~  378 (380)
T 1vj0_A          321 FKGIWVSD----------TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL--KVILYP  378 (380)
T ss_dssp             EEECCCCC----------HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS--CEEEEC
T ss_pred             EEEeecCC----------HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc--eEEEEe
Confidence            99976531          2568889999999  9997764 689999999999999887754  999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.8e-50  Score=375.93  Aligned_cols=309  Identities=21%  Similarity=0.267  Sum_probs=268.9

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-------CCCCCccCCCceeEEEEEe
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------RPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~v  120 (378)
                      ||++++..++.+   +++++.|.|+++++||+|||.++|||++|++.+.|.++.       ..++|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            799999988754   788999999999999999999999999999999886542       2357999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCC--------------------------CCcccccceeccC-CceEEcCCCCCHhhhhhccccH
Q 017064          121 GSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQ-SVWHKVSKDSPMEYAATIIVNP  173 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~-~~~~~iP~~~~~~~aa~~~~~~  173 (378)
                      |++|++|++||||++.+.                          ..|+|+||+++|+ ++++++ +++++++|+++++++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~  156 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG  156 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence            999999999999976531                          2589999999999 999999 999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHH
Q 017064          174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKN  251 (378)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~  251 (378)
                      +|||+++.+ +++++|++|||+|++|++|++++|+|++. |++|+++.    .++++.+.++++|+++++++.+.+ .+.
T Consensus       157 ~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~  231 (347)
T 1jvb_A          157 ITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD----VREEAVEAAKRAGADYVINASMQDPLAE  231 (347)
T ss_dssp             HHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred             HHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCEEecCCCccHHHH
Confidence            999999976 89999999999999779999999999999 99998887    478888999999999999887654 455


Q ss_pred             HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064          252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      +.+.+... ++|++||++|.+ .++.++++++++|+++.+|.....+ .++...++.+++++.|+....          .
T Consensus       232 ~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~----------~  299 (347)
T 1jvb_A          232 IRRITESK-GVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGN----------Q  299 (347)
T ss_dssp             HHHHTTTS-CEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCC----------H
T ss_pred             HHHHhcCC-CceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccC----------H
Confidence            77776521 499999999987 6788999999999999999655233 566677788999999976532          2


Q ss_pred             HHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          331 NMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.++++++++++|++++.+ ++|+|+++++||+.+.+++..| |+||++
T Consensus       300 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~  347 (347)
T 1jvb_A          300 SDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIG-RQVLIP  347 (347)
T ss_dssp             HHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCS-EEEEEC
T ss_pred             HHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcc-eEEecC
Confidence            5688899999999999876 7899999999999999998888 999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=2e-50  Score=377.18  Aligned_cols=306  Identities=19%  Similarity=0.188  Sum_probs=263.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||++++..++++   +++++.|.|+++++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|++|+
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG---LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc---EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            799999998864   788999999999999999999999999999999886541  125789999999999999999999


Q ss_pred             CCCCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          126 RLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       126 ~~~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      +|++||||++.+                          ...|+|+||+++++++++++|+++++++|+++. ++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~  156 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILE-PFGNAVHT  156 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHH-HHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhh-HHHHHHHH
Confidence            999999999853                          125899999999999999999999999999884 67899999


Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhc
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA  257 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~  257 (378)
                      +.+.+++ +|++|||+|+ |++|++++|+|+++|+ +|++++    .++++.++++++ +++++++++.+ .+.+++.+ 
T Consensus       157 l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~----~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~-  228 (343)
T 2dq4_A          157 VYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSD----PNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-  228 (343)
T ss_dssp             HHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEEC----SCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH-
T ss_pred             HHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc-
Confidence            9756889 9999999999 9999999999999999 899888    478888999999 99999987654 45677777 


Q ss_pred             CCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064          258 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY  335 (378)
Q Consensus       258 ~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (378)
                      +.+ +|+|||++|+ ..++.++++++++|+++.+|... .+..++. ..++.+++++.|+....         ..+.+++
T Consensus       229 ~~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~  297 (343)
T 2dq4_A          229 GSG-VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPS-DPIRFDLAGELVMRGITAFGIAGRR---------LWQTWMQ  297 (343)
T ss_dssp             SSC-EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCS-SCEEECHHHHTGGGTCEEEECCSCC---------TTHHHHH
T ss_pred             CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCceeCcHHHHHhCceEEEEeecCC---------CHHHHHH
Confidence            545 9999999998 67789999999999999998643 3456676 67888999999975431         1256788


Q ss_pred             HHHHHHcCCcc--cc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          336 LLCLAREGKLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       336 ~~~~l~~g~~~--~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++|+++  +. .++|+|+++++|++.+.+++. | |+||++
T Consensus       298 ~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-g-Kvv~~~  341 (343)
T 2dq4_A          298 GTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-V-KVILDP  341 (343)
T ss_dssp             HHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-S-EEEEET
T ss_pred             HHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-e-EEEEee
Confidence            99999999964  44 368999999999999998877 7 999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=5.3e-50  Score=377.25  Aligned_cols=306  Identities=20%  Similarity=0.247  Sum_probs=259.8

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||+..+...+.+.. +++.++|.|++++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|
T Consensus        15 mk~~~~~~~~~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           15 VKAFGWAARDQSGH-LSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             EEEEEEEECSTTCC-EEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             eeEEEEEEcCCCCC-cEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEEECCCCCcC
Confidence            44444444443333 888999999999999999999999999999999886643 2579999999999999999999999


Q ss_pred             CCCCEEeeCC----------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccH
Q 017064          128 APGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP  173 (378)
Q Consensus       128 ~~Gd~V~~~~----------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~  173 (378)
                      ++||||++.+                                  ...|+|+||+++|+++++++|+++++++||++++++
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  172 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG  172 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHH
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhH
Confidence            9999998532                                  135899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccC-CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHH
Q 017064          174 LTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKN  251 (378)
Q Consensus       174 ~ta~~~l~~~~~~~-~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~  251 (378)
                      .|||+++.+ .++. +|++|||+|+ |++|++++|+|+++|++|++++    .++++++.++ ++|+++++++.+.  +.
T Consensus       173 ~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~----~~~~~~~~~~~~lGa~~v~~~~~~--~~  244 (366)
T 1yqd_A          173 ITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIS----TSPSKKEEALKNFGADSFLVSRDQ--EQ  244 (366)
T ss_dssp             HHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCGGGHHHHHHTSCCSEEEETTCH--HH
T ss_pred             HHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhcCCceEEeccCH--HH
Confidence            999999986 6788 9999999997 9999999999999999999888    4667777776 8999999988753  34


Q ss_pred             HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064          252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR  330 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (378)
                      +.+.++   ++|+|||++|.. .++.++++++++|+++.+|.... +..++...++.+++++.|++...          .
T Consensus       245 ~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~  310 (366)
T 1yqd_A          245 MQAAAG---TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK-PLELPAFSLIAGRKIVAGSGIGG----------M  310 (366)
T ss_dssp             HHHTTT---CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS-CEEECHHHHHTTTCEEEECCSCC----------H
T ss_pred             HHHhhC---CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC-CCCcCHHHHHhCCcEEEEecCCC----------H
Confidence            555553   399999999986 67999999999999999986543 44566677888999999976532          2


Q ss_pred             HHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          331 NMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       331 ~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.++++++++++|++++.+++|||+|+++||+.+.+++..| |+|+++
T Consensus       311 ~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~  357 (366)
T 1yqd_A          311 KETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRY-RFVIDV  357 (366)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECGGGHHHHHHHHHTTCCSS-EEEECH
T ss_pred             HHHHHHHHHHHcCCCCCceEEEcHHHHHHHHHHHHcCCcce-EEEEEc
Confidence            45778999999999998888999999999999999998888 999863

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=3.7e-50  Score=382.63  Aligned_cols=306  Identities=19%  Similarity=0.161  Sum_probs=262.2

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCC-CC-----CcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEV-KE-----NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~-~~-----~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      +||++++..++.    ++++++|.|.+ ++     +||+|||.++|||++|++.+.|.++.  ++|.++|||++|+|+++
T Consensus         2 ~MkA~~~~~~~~----l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~--~~p~v~GhE~~G~V~~v   75 (398)
T 2dph_A            2 GNKSVVYHGTRD----LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIV--PKGHVLGHEITGEVVEK   75 (398)
T ss_dssp             CEEEEEEEETTE----EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCC--CTTCBCCCCEEEEEEEE
T ss_pred             ccEEEEEEcCCC----EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCC--CCCcccCCceEEEEEEE
Confidence            689999998764    88999999987 68     99999999999999999999986532  57899999999999999


Q ss_pred             cCCCCCCCCCCEEeeCC-------------------------------------CCCcccccceeccCC--ceEEcCCCC
Q 017064          121 GSAVTRLAPGDWVIPSP-------------------------------------PSSGTWQSYVVKDQS--VWHKVSKDS  161 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~-------------------------------------~~~G~~~~~~~~~~~--~~~~iP~~~  161 (378)
                      |++|++|++||||++.+                                     ...|+|+||++++++  .++++|+++
T Consensus        76 G~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~  155 (398)
T 2dph_A           76 GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKE  155 (398)
T ss_dssp             CTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHH
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCC
Confidence            99999999999998632                                     125899999999987  899999999


Q ss_pred             CHhh----hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhC
Q 017064          162 PMEY----AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGL  236 (378)
Q Consensus       162 ~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~  236 (378)
                      ++++    |++++.+++|||+++. .+++++|++|||+|+ |++|++++|+||++|+ +|++++    .+++++++++++
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~l  229 (398)
T 2dph_A          156 QAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGD----QNPERLKLLSDA  229 (398)
T ss_dssp             HHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEE----SCHHHHHHHHTT
T ss_pred             ChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHc
Confidence            9998    8999999999999994 689999999999997 9999999999999999 888887    478899999999


Q ss_pred             CCcEEEccCccc--HHHHHHHhcCCCCCcEEEeCCCCc---------------cHHHHHHhcccCCEEEEEecCC-----
Q 017064          237 GADEVFTESQLE--VKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLSQGGTMVTYGGMS-----  294 (378)
Q Consensus       237 ga~~vi~~~~~~--~~~i~~~~~~~g~~Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-----  294 (378)
                      |++ ++++.+.+  .+.+++++++.+ +|+||||+|+.               .+..++++++++|+++.+|...     
T Consensus       230 Ga~-~i~~~~~~~~~~~~~~~~~g~g-~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~  307 (398)
T 2dph_A          230 GFE-TIDLRNSAPLRDQIDQILGKPE-VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPD  307 (398)
T ss_dssp             TCE-EEETTSSSCHHHHHHHHHSSSC-EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSS
T ss_pred             CCc-EEcCCCcchHHHHHHHHhCCCC-CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccc
Confidence            996 78876643  567888888766 99999999976               4789999999999999998652     


Q ss_pred             -------CCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcc--cc---ceeeccccHHHHHH
Q 017064          295 -------KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK--YD---MELVPFNNFQTALS  362 (378)
Q Consensus       295 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~--~~---~~~~~l~~~~~a~~  362 (378)
                             ..+..++...++.+++++.++....          .+.++++++++++|+++  +.   .++|+|+++++||+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~----------~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~  377 (398)
T 2dph_A          308 PVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV----------TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYA  377 (398)
T ss_dssp             CSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG----------GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHH
T ss_pred             cccccccCCcccccHHHHhhcCCEEEEeccCc----------HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHH
Confidence                   1223455566788999998864321          24577899999999999  62   47899999999999


Q ss_pred             HHHccCCCCCceEeeC
Q 017064          363 KALGLHGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~~~~g~kvvv~~  378 (378)
                      .+.+++. | |+||++
T Consensus       378 ~~~~~~~-g-Kvvv~~  391 (398)
T 2dph_A          378 KFDKGSP-A-KFVIDP  391 (398)
T ss_dssp             HHHTTCS-C-EEEECT
T ss_pred             HHhcCCc-e-EEEEec
Confidence            9998887 7 999975

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-49  Score=376.50  Aligned_cols=306  Identities=17%  Similarity=0.116  Sum_probs=258.7

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCC-CCc------EEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEE
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVK-END------VCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS  119 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~-~~e------VlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~  119 (378)
                      +||++++..++.    +++++.|.|+++ ++|      |+|||.++|||++|++.+.|.++.  ++|.++|||++|+|++
T Consensus         2 ~Mka~~~~~~~~----l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~p~v~GhE~~G~V~~   75 (398)
T 1kol_A            2 GNRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIE   75 (398)
T ss_dssp             CEEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEE
T ss_pred             ccEEEEEecCCc----eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCC--CCCcccCcccEEEEEE
Confidence            689999988764    889999999987 898      999999999999999999986542  4689999999999999


Q ss_pred             ecCCCCCCCCCCEEeeCC------------------------------------CCCcccccceeccCC--ceEEcCCCC
Q 017064          120 VGSAVTRLAPGDWVIPSP------------------------------------PSSGTWQSYVVKDQS--VWHKVSKDS  161 (378)
Q Consensus       120 vG~~v~~~~~Gd~V~~~~------------------------------------~~~G~~~~~~~~~~~--~~~~iP~~~  161 (378)
                      +|++|++|++||||++.+                                    ...|+|+||++++++  +++++|+++
T Consensus        76 vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~  155 (398)
T 1kol_A           76 KGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRD  155 (398)
T ss_dssp             ECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHH
T ss_pred             ECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCc
Confidence            999999999999998531                                    124899999999987  899999999


Q ss_pred             CHhh----hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhC
Q 017064          162 PMEY----AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGL  236 (378)
Q Consensus       162 ~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~  236 (378)
                      ++++    +++++.++.|||+++. .+++++|++|||+|+ |++|++++|+||++|+ +|+++.    .+++|+++++++
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~----~~~~~~~~a~~l  229 (398)
T 1kol_A          156 KAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGD----LNPARLAHAKAQ  229 (398)
T ss_dssp             HHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHT
T ss_pred             chhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEc----CCHHHHHHHHHc
Confidence            9988    7889989999999997 589999999999996 9999999999999999 566665    478999999999


Q ss_pred             CCcEEEccCcc--cHHHHHHHhcCCCCCcEEEeCCCCc----------------cHHHHHHhcccCCEEEEEecC-CCC-
Q 017064          237 GADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------SASKVLKFLSQGGTMVTYGGM-SKK-  296 (378)
Q Consensus       237 ga~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~----------------~~~~~~~~l~~~G~~v~~g~~-~~~-  296 (378)
                      |++ ++++.+.  ..+.+++++++.| +|+||||+|++                .++.++++++++|+++.+|.. ... 
T Consensus       230 Ga~-~i~~~~~~~~~~~v~~~t~g~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~  307 (398)
T 1kol_A          230 GFE-IADLSLDTPLHEQIAALLGEPE-VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDP  307 (398)
T ss_dssp             TCE-EEETTSSSCHHHHHHHHHSSSC-EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCT
T ss_pred             CCc-EEccCCcchHHHHHHHHhCCCC-CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcc
Confidence            997 7777653  3567888888766 99999999986                468999999999999999854 211 


Q ss_pred             ----------CccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcc---cc-ceeeccccHHHHHH
Q 017064          297 ----------PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK---YD-MELVPFNNFQTALS  362 (378)
Q Consensus       297 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~---~~-~~~~~l~~~~~a~~  362 (378)
                                ...++...++.+++++.+....          ..+.++++++++.+|+++   +. .++|+|+|+++||+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~  377 (398)
T 1kol_A          308 GAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP----------VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYG  377 (398)
T ss_dssp             TCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC----------HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHH
T ss_pred             cccccccccccccccHHHHhhcccEEEecccC----------hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHH
Confidence                      1234555677899998875321          235578899999999998   23 47899999999999


Q ss_pred             HHHccCCCCCceEeeC
Q 017064          363 KALGLHGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~~~~g~kvvv~~  378 (378)
                      .+.+++. | |+||++
T Consensus       378 ~~~~~~~-g-Kvvi~~  391 (398)
T 1kol_A          378 EFDAGVP-K-KFVIDP  391 (398)
T ss_dssp             HHHHTCS-C-EEEECT
T ss_pred             HHhCCCc-e-EEEEEe
Confidence            9998887 7 999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=7.7e-49  Score=365.62  Aligned_cols=313  Identities=21%  Similarity=0.257  Sum_probs=267.1

Q ss_pred             cccceEEEcc--cCCC-ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCc----eeEEEE
Q 017064           46 PPSKAVVYER--EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYE----GVGEVY  118 (378)
Q Consensus        46 ~~~~a~~~~~--~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----~~G~V~  118 (378)
                      .+||++++..  ++.+ .+.+++.+.|.|++++|||+|||.++|||++|+..+.+....  .+|.++|||    ++|+|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--~~p~~~G~e~g~~~~G~V~   83 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY--IPPVGIGEVMRALGVGKVL   83 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS--SCCCCTTSBCCCEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc--CCCCCCCcccCCceEEEEE
Confidence            4689999986  2211 123999999999999999999999999999999888764332  357788888    799999


Q ss_pred             EecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhh--hhccccHHHHHHHHHHHhccCCCCEEEEeC
Q 017064          119 SVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA--ATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (378)
Q Consensus       119 ~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g  196 (378)
                      +.  ++++|++||||++.    |+|+||+++|+++++++|+++++.++  ++++++++|||+++.+.+++++|++|||+|
T Consensus        84 ~~--~v~~~~vGdrV~~~----G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~G  157 (336)
T 4b7c_A           84 VS--KHPGFQAGDYVNGA----LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISG  157 (336)
T ss_dssp             EE--CSTTCCTTCEEEEE----CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESS
T ss_pred             ec--CCCCCCCCCEEecc----CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            94  58999999999975    89999999999999999999977776  788999999999998889999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       197 ~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      ++|++|++++|+|++.|++|++++    .++++.+.+ +++|+++++|+.+.+ .+.+.+.+++  ++|++|||+|++.+
T Consensus       158 a~g~iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~d~vi~~~g~~~~  231 (336)
T 4b7c_A          158 AAGAVGSVAGQIARLKGCRVVGIA----GGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPK--GIDVFFDNVGGEIL  231 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTT--CEEEEEESSCHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCC--CceEEEECCCcchH
Confidence            999999999999999999999988    478888888 899999999987765 4567777743  49999999999888


Q ss_pred             HHHHHhcccCCEEEEEecCCC----C--CccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc
Q 017064          275 SKVLKFLSQGGTMVTYGGMSK----K--PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD  348 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  348 (378)
                      ..++++++++|+++.+|....    .  ...++...++.+++++.|++...+.     ....+.++++++++++|++++.
T Consensus       232 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g~l~~~  306 (336)
T 4b7c_A          232 DTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYA-----QRFPEGLKEMATWLAEGKLQSR  306 (336)
T ss_dssp             HHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGG-----GGHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhh-----hhhHHHHHHHHHHHHCCCcccc
Confidence            999999999999999986542    1  1245566788899999999876542     1255788999999999999988


Q ss_pred             ce-eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          349 ME-LVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       349 ~~-~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      .. .|+|+++++||+.+.+++..| |+||++
T Consensus       307 ~~~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  336 (336)
T 4b7c_A          307 EDIVEGLETFPETLLKLFSGENFG-KLVLKV  336 (336)
T ss_dssp             EEEEECGGGHHHHHHHHHTTCCCS-EEEEEC
T ss_pred             eeeecCHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence            54 589999999999999999999 999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.7e-50  Score=412.82  Aligned_cols=340  Identities=23%  Similarity=0.255  Sum_probs=286.5

Q ss_pred             CchhhhhhhhhccccchhHHHHHHHhhccccchhhhhhhccccCCcccceEEEcccCCCccceEEeeeCC--CCCCCCcE
Q 017064            1 MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPP--VEVKENDV   78 (378)
Q Consensus         1 ~~~~~~~~~l~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--p~~~~~eV   78 (378)
                      .||+..++.+|+||+.++...     ..  .      .    ........+.+..++.+.. +++.+.+.  |++++|||
T Consensus       180 ~E~a~r~G~~~V~Rl~~~~~~-----~~--~------~----~~~~~~~~l~~~~~G~~~~-L~~~~~~~p~~~~~~~eV  241 (795)
T 3slk_A          180 PQLALRRGGAHAPRLAGLGSD-----DV--L------P----VPDGTGWRLEATRPGSLDG-LALVDEPTATAPLGDGEV  241 (795)
T ss_dssp             SEEEECSSCEECCEEEESCSS-----CC--C------C----CCCSSSCCEEESSTTSSTT-EEECCCHHHHSCCCSSEE
T ss_pred             ceEEEECCcEEEeeeeccccc-----cc--c------C----CCCCceEEEecCCCCCccc-eEEEeCCccCCCCCCCEE
Confidence            378899999999999987544     00  0      0    0112236777888888776 88888774  57899999


Q ss_pred             EEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcC
Q 017064           79 CVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS  158 (378)
Q Consensus        79 lV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP  158 (378)
                      +|||.++|||++|++.+.|.++.    |.++|||++|+|+++|++|++|++||||++...  |+|++|++++++.++++|
T Consensus       242 lV~V~a~gin~~D~~~~~G~~~~----~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~--G~~ae~~~v~~~~~~~iP  315 (795)
T 3slk_A          242 RIAMRAAGVNFRDALIALGMYPG----VASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP--KAFGPLAVADHRMVTRIP  315 (795)
T ss_dssp             EEEEEEEEECHHHHHHTTTCCSS----CCCSCCCEEEEEEEECSSCCSSCTTCEEEECCS--SCSSSEEEEETTSEEECC
T ss_pred             EEEEEEEccCHHHHHHHcCCCCC----CccccceeEEEEEEeCCCCCcCCCCCEEEEEec--CCCcCEEEeehHHEEECC
Confidence            99999999999999999987653    567999999999999999999999999999865  999999999999999999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                      +++++++||+++++++|||+++.+.+++++|++|||+|++|++|++++|+||++|++|++++.    ++ |.+.++ +|+
T Consensus       316 ~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~----~~-k~~~l~-lga  389 (795)
T 3slk_A          316 AGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS----ED-KWQAVE-LSR  389 (795)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECC----GG-GGGGSC-SCG
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC----hH-Hhhhhh-cCh
Confidence            999999999999999999999988899999999999999999999999999999999999882    33 555554 999


Q ss_pred             cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          239 DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       239 ~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      ++++++++.+ .+.+++.++++| +|+||||+|++.+..++++++++|+++.+|...... ... .....+++++.++++
T Consensus       390 ~~v~~~~~~~~~~~i~~~t~g~G-vDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~~~-~~~-~~~~~~~~~~~~~~l  466 (795)
T 3slk_A          390 EHLASSRTCDFEQQFLGATGGRG-VDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRD-PVE-VADAHPGVSYQAFDT  466 (795)
T ss_dssp             GGEECSSSSTHHHHHHHHSCSSC-CSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTCCC-HHH-HHHHSSSEEEEECCG
T ss_pred             hheeecCChhHHHHHHHHcCCCC-eEEEEECCCcHHHHHHHHHhcCCCEEEEeccccccC-ccc-ccccCCCCEEEEeec
Confidence            9999988765 467889999887 999999999999999999999999999998543321 111 122347888877764


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ..    ..+....+.++++++++++|++++. +++||++++++||+.+++++..| |+||++
T Consensus       467 ~~----~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~G-KvVl~~  523 (795)
T 3slk_A          467 VE----AGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVG-KLVLTM  523 (795)
T ss_dssp             GG----GHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCB-EEEEEC
T ss_pred             cc----cCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccc-eEEEec
Confidence            31    2455677899999999999999986 56899999999999999999999 999974

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=5.4e-49  Score=375.17  Aligned_cols=307  Identities=18%  Similarity=0.210  Sum_probs=256.6

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCC-CCCCcEEEEEEeeccChhhhhhhcccC------CCCCCCCccCCCceeEEEE
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVY  118 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~  118 (378)
                      .+|++..+...+.    ++++++|.|. ++++||+|||.++|||++|++.+.|..      +...++|.++|||++|+|+
T Consensus        29 ~~m~a~~~~~~~~----l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           29 LTWLGSKVWRYPE----VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             BBSCGGGTEEEEE----EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhcceEEEEeCCc----eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            3455544444432    8999999999 999999999999999999999988642      2223579999999999999


Q ss_pred             EecCCC------CCCCCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCCCC----
Q 017064          119 SVGSAV------TRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSP----  162 (378)
Q Consensus       119 ~vG~~v------~~~~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~~~----  162 (378)
                      ++|++|      ++|++||||++.+                          ...|+|+||++++++.++++|++++    
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~  184 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEG  184 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCT
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEecccccccccc
Confidence            999999      8999999999853                          1269999999999999999999885    


Q ss_pred             --HhhhhhccccHHHHHHHHHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCC
Q 017064          163 --MEYAATIIVNPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (378)
Q Consensus       163 --~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga  238 (378)
                        +.++++++.+++|||+++... +++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .+++|+++++++|+
T Consensus       185 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~~~~lGa  259 (404)
T 3ip1_A          185 DRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSE----PSEVRRNLAKELGA  259 (404)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCHHHHHHHHHHTC
T ss_pred             ccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCC
Confidence              566888888999999999754 48999999999998 9999999999999999 777766    48899999999999


Q ss_pred             cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhc----ccCCEEEEEecCCCCCccccchhhhhcCce
Q 017064          239 DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN--SASKVLKFL----SQGGTMVTYGGMSKKPITVSTSAFIFKDLS  311 (378)
Q Consensus       239 ~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  311 (378)
                      ++++++++.+ .+.+++++++.| +|+||||+|++  .+..+++++    +++|+++.+|.... +..++...++.++++
T Consensus       260 ~~vi~~~~~~~~~~i~~~t~g~g-~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~  337 (404)
T 3ip1_A          260 DHVIDPTKENFVEAVLDYTNGLG-AKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA-KIPLTGEVFQVRRAQ  337 (404)
T ss_dssp             SEEECTTTSCHHHHHHHHTTTCC-CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS-CEEECHHHHHHTTCE
T ss_pred             CEEEcCCCCCHHHHHHHHhCCCC-CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC-CCcccHHHHhccceE
Confidence            9999987765 567888888877 99999999998  556677777    99999999996544 456778888899999


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +.|+.....         .+.++++++++++| +++.   +++|+|+++++||+.+.    .| |+||++
T Consensus       338 i~g~~~~~~---------~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~G-Kvvl~~  392 (404)
T 3ip1_A          338 IVGSQGHSG---------HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TD-KSLVKV  392 (404)
T ss_dssp             EEECCCCCS---------TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TC-TTCSCE
T ss_pred             EEEecCCCc---------hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CC-cEEEec
Confidence            999864321         14577899999999 7653   46899999999999997    56 888753

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.1e-49  Score=372.67  Aligned_cols=315  Identities=24%  Similarity=0.272  Sum_probs=256.7

Q ss_pred             CCcccceEEEcccCCCccceEE-eeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCC--------------CCCCCCc
Q 017064           44 MSPPSKAVVYEREGPPDSVIKM-IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------------VRPKVPA  107 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~  107 (378)
                      ++.+||++++..++.+.. +++ ++.|.|.+ +++||+|||.++|||++|++.+.|..+              ...++|.
T Consensus        18 ~~~~mka~~~~~~g~~~~-l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEV-LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGG-CEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             cCccceeEEeccCCCccc-eEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            566799999999887654 888 89999985 999999999999999999999887532              1123789


Q ss_pred             cCCCceeEEEEEecCCCCCCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhc
Q 017064          108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT  185 (378)
Q Consensus       108 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~  185 (378)
                      ++|||++|+|+++|++|++|++||||++...  ..|+|+||++++++.++++|+++++++||+++++++|||+++.+.++
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~  176 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGG  176 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTC
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999998652  25999999999999999999999999999999999999999987788


Q ss_pred             ----cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCC
Q 017064          186 ----LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLP  260 (378)
Q Consensus       186 ----~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g  260 (378)
                          +++|++|||+|++|++|++++|+|++.|++|++++     ++++.+.++++|+++++++++.+. +.+.+.   . 
T Consensus       177 ~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~---~-  247 (375)
T 2vn8_A          177 LNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-----SQDASELVRKLGADDVIDYKSGSVEEQLKSL---K-  247 (375)
T ss_dssp             CCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEEEETTSSCHHHHHHTS---C-
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-----ChHHHHHHHHcCCCEEEECCchHHHHHHhhc---C-
Confidence                99999999999889999999999999999998877     346778889999999999876543 344432   2 


Q ss_pred             CCcEEEeCCCCccH--HHHHHhcccCCEEEEEecCCCCCcc---ccc------hhhhh-------cCceEEEEechhhhc
Q 017064          261 EPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGMSKKPIT---VST------SAFIF-------KDLSLKGFWLQKWLS  322 (378)
Q Consensus       261 ~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~~~~~~~~---~~~------~~~~~-------~~~~~~~~~~~~~~~  322 (378)
                      ++|++|||+|++..  ..++++++++|+++.+|........   ++.      ..++.       ++..+.+...    .
T Consensus       248 g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~  323 (375)
T 2vn8_A          248 PFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF----M  323 (375)
T ss_dssp             CBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC----C
T ss_pred             CCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe----C
Confidence            49999999999743  7889999999999999853221110   111      11222       2333332211    0


Q ss_pred             cccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          323 SEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                         +  ..+.++++++++++|++++.+ ++|||+++++||+.+.+++..| |+|+++
T Consensus       324 ---~--~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  374 (375)
T 2vn8_A          324 ---A--SGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARG-KTVINV  374 (375)
T ss_dssp             ---C--CHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSS-EEEEEC
T ss_pred             ---C--CHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCC-eEEEEe
Confidence               0  135678899999999999775 5899999999999999998888 999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=8.8e-50  Score=377.34  Aligned_cols=317  Identities=19%  Similarity=0.266  Sum_probs=267.0

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC------------------------
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV------------------------  101 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~------------------------  101 (378)
                      .+||+++......   .+++++.|.|+++++||+|||.+++||++|++.+.|.++.                        
T Consensus         6 ~~mka~v~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~   82 (379)
T 3iup_A            6 LQLRSRIKSSGEL---ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMR   82 (379)
T ss_dssp             EEEEEEECTTSEE---EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHH
T ss_pred             hhHHHHHhcCCCC---ceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccc
Confidence            4588887753222   2899999999999999999999999999999999885310                        


Q ss_pred             ----CCCCCccCCCceeEEEEEecCCC-CCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064          102 ----RPKVPAVGGYEGVGEVYSVGSAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       102 ----~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                          ..++|.++|||++|+|+++|++| ++|++||||++.+.  |+|+||+++++++++++|+++++++|+++++.++||
T Consensus        83 ~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~--G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  160 (379)
T 3iup_A           83 SMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG--AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTA  160 (379)
T ss_dssp             HHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS--CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHH
T ss_pred             ccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC--CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHH
Confidence                12468999999999999999999 89999999999865  999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCEEEEeC-CCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNG-ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG  254 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g-~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~  254 (378)
                      |+++.. .. ++|++|||+| ++|++|++++|+|+++|++|++++    .+++|.++++++|+++++|+++.+ .+.+++
T Consensus       161 ~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~  234 (379)
T 3iup_A          161 LGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV----RKQEQADLLKAQGAVHVCNAASPTFMQDLTE  234 (379)
T ss_dssp             HHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE----SSHHHHHHHHHTTCSCEEETTSTTHHHHHHH
T ss_pred             HHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHhCCCcEEEeCCChHHHHHHHH
Confidence            987766 44 8999999996 779999999999999999999998    588999999999999999988765 467888


Q ss_pred             HhcCCCCCcEEEeCCCCccH-HHHHHhcc-----cC-----------CEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNSA-SKVLKFLS-----QG-----------GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~-~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      ++++.| +|+||||+|++.. +.++++++     ++           |+++.+|.....  ..+...++.+++++.|+.+
T Consensus       235 ~t~~~g-~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~g~~~  311 (379)
T 3iup_A          235 ALVSTG-ATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMGGWLL  311 (379)
T ss_dssp             HHHHHC-CCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEEECCH
T ss_pred             HhcCCC-ceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEEEEEe
Confidence            887766 9999999998654 77788885     44           666666643322  2334456778999999988


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccH--HHHHHHHHccCCCCCceEeeC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNF--QTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~--~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ..+.....++...+.++++++++.+ .+++.+ ++|+|+++  ++||+.+.+++..| |+||++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~g-KvVv~~  373 (379)
T 3iup_A          312 FPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGE-KYLINP  373 (379)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTC-CEEEET
T ss_pred             eeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCc-eEEEeC
Confidence            7765555667777888999999988 477764 78999999  99999999999999 999974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.9e-48  Score=365.91  Aligned_cols=318  Identities=22%  Similarity=0.262  Sum_probs=265.4

Q ss_pred             cCCcccceEEE-ccc---CCC-ccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcc----cCCCCCCCCccCCCc
Q 017064           43 LMSPPSKAVVY-ERE---GPP-DSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEG----VYPVRPKVPAVGGYE  112 (378)
Q Consensus        43 ~~~~~~~a~~~-~~~---~~~-~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~G~e  112 (378)
                      .+|.+||++++ ..+   +.+ .+.+++++.|.|.+ +++||+|||.++|||++|++.+.+    .++...++|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            46778999999 565   444 12389999999998 999999999999999999987775    222122568999999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCC-----CHhhhhhccccHHHHHHHHHHHhccC
Q 017064          113 GVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----PMEYAATIIVNPLTALRMLEDFTTLN  187 (378)
Q Consensus       113 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~-----~~~~aa~~~~~~~ta~~~l~~~~~~~  187 (378)
                      ++|+|++  ++|++|++||||++.   .|+|+||++++++.++++|+++     +++ +++++.+++|||+++.+.++++
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~---~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~  157 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSF---YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHIT  157 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE---EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCC
T ss_pred             EEEEEEe--cCCCCCCCCCEEEec---CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCC
Confidence            9999999  899999999999986   3899999999999999999999     655 7788889999999998779999


Q ss_pred             CC--CEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh-CCCcEEEccCccc-HHHHHHHhcCCCCC
Q 017064          188 SG--DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g--~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~-~~~i~~~~~~~g~~  262 (378)
                      +|  ++|||+|++|++|++++|+|++.|+ +|++++    .++++.+.+++ +|+++++++.+.+ .+.+.+.+++ + +
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~----~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~-~  231 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC----GTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-G-V  231 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-C-E
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-C-C
Confidence            99  9999999999999999999999999 998888    46788888876 9999999887654 4567777766 4 9


Q ss_pred             cEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccc---------hhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064          263 ALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST---------SAFIFKDLSLKGFWLQKWLSSEKATECRNMI  333 (378)
Q Consensus       263 Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (378)
                      |++|||+|+..++.++++++++|+++.+|........++.         ..++.+++++.++....+     +....+.+
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  306 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY-----KDKFEPGI  306 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGG-----GGGHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhh-----hHHHHHHH
Confidence            9999999998889999999999999999865432222221         456789999999876433     12345778


Q ss_pred             HHHHHHHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          334 DYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       334 ~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++++++++|++++.. ..|+|+++++||+.+.+++..| |+||++
T Consensus       307 ~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvi~~  351 (357)
T 2zb4_A          307 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIG-KQIVCI  351 (357)
T ss_dssp             HHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSB-EEEEEC
T ss_pred             HHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCc-eEEEEE
Confidence            9999999999999874 4699999999999999988888 999975

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.3e-49  Score=370.90  Aligned_cols=299  Identities=19%  Similarity=0.208  Sum_probs=254.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCC---CccCCCceeEEEEEecCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV---PAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G~V~~vG~~v  124 (378)
                      ||++++..++.+   +++++.|.|.++++||+|||.++|||++|++.+.|.++. .++   |.++|||++| |+++|++ 
T Consensus         1 MkA~~~~~~~~~---l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-   74 (357)
T 2b5w_A            1 MKAIAVKRGEDR---PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-   74 (357)
T ss_dssp             CEEEEEETTCSS---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-
T ss_pred             CeEEEEeCCCCc---eEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-
Confidence            799999988763   788999999999999999999999999999999987654 245   8999999999 9999999 


Q ss_pred             CCCCCCCEEeeCC-------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccH
Q 017064          125 TRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP  173 (378)
Q Consensus       125 ~~~~~Gd~V~~~~-------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~  173 (378)
                      ++|++||||++.+                               ...|+|+||+++|++.++++|++++ ++ |+++.++
T Consensus        75 ~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~  152 (357)
T 2b5w_A           75 TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPI  152 (357)
T ss_dssp             SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHHH
T ss_pred             CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhchH
Confidence            9999999999762                               1148999999999999999999999 54 5577789


Q ss_pred             HHHHHHHHHHhccCCC------CEEEEeCCCchHHHHH-HHHH-HHcCCc-EEEEecCCCCcHH---HHHHHHhCCCcEE
Q 017064          174 LTALRMLEDFTTLNSG------DSIVQNGATSIVGQCI-IQIA-RHRGIH-SINIIRDRAGSDE---AKEKLKGLGADEV  241 (378)
Q Consensus       174 ~ta~~~l~~~~~~~~g------~~VlV~g~~g~~G~~a-v~la-~~~g~~-vi~~~~~~~~~~~---~~~~~~~~ga~~v  241 (378)
                      +|||+++. .+++++|      ++|||+|+ |++|+++ +|+| |++|++ |++++    .+++   ++++++++|++++
T Consensus       153 ~ta~~al~-~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~----~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          153 SITEKALE-HAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLG----RRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             HHHHHHHH-HHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEE----CCCSSCHHHHHHHHTTCEEE
T ss_pred             HHHHHHHH-hcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEe----CCcccHHHHHHHHHcCCccc
Confidence            99999994 5899999      99999999 9999999 9999 999998 88888    3556   8889999999999


Q ss_pred             EccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhh----hhcCceEEEEe
Q 017064          242 FTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF----IFKDLSLKGFW  316 (378)
Q Consensus       242 i~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~  316 (378)
                       ++++.+..+++++ ++ + +|+||||+|++ .++.++++++++|+++.+|.....+.+++...+    +.+++++.|+.
T Consensus       227 -~~~~~~~~~i~~~-~g-g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  302 (357)
T 2b5w_A          227 -DSRQTPVEDVPDV-YE-Q-MDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSV  302 (357)
T ss_dssp             -ETTTSCGGGHHHH-SC-C-EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECC
T ss_pred             -CCCccCHHHHHHh-CC-C-CCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEec
Confidence             8876554337666 55 4 99999999986 678999999999999999965533455666667    78999999976


Q ss_pred             chhhhccccHHHHHHHHHHHHHHHHcC--C-ccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          317 LQKWLSSEKATECRNMIDYLLCLAREG--K-LKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~g--~-~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ...          .+.++++++++++|  + +++.+ ++|+|+++++||+.+   +..| |+||++
T Consensus       303 ~~~----------~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~g-Kvvi~~  354 (357)
T 2b5w_A          303 NSH----------VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTI-KTAIEF  354 (357)
T ss_dssp             CCC----------HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCC-EEEEEC
T ss_pred             cCC----------HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCc-eEEEEe
Confidence            532          35688999999999  8 56654 689999999999988   3467 999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.4e-48  Score=356.85  Aligned_cols=297  Identities=24%  Similarity=0.318  Sum_probs=251.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++..++.+.   .+++.|.|.++++||+|||.++|+|++|++.+.|.++...++|.++|||++|+|+         
T Consensus         1 Mka~~~~~~g~~~---~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~---------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPL---ELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------   68 (302)
T ss_dssp             CEEEEECSTTSCE---EEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET---------
T ss_pred             CeEEEEcCCCCch---heEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE---------
Confidence            7999999988763   3458899999999999999999999999999998776544679999999999998         


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~  207 (378)
                        ||||++... .|+|+||++++++.++++|+++++++||+++.+++|||+++.+.+ +++|++|||+|++|++|++++|
T Consensus        69 --GdrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~  144 (302)
T 1iz0_A           69 --GRRYAALVP-QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQ  144 (302)
T ss_dssp             --TEEEEEECS-SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHH
T ss_pred             --CcEEEEecC-CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHH
Confidence              999998764 599999999999999999999999999999999999999998767 9999999999999999999999


Q ss_pred             HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT  286 (378)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~  286 (378)
                      +|++.|++|++++    .++++.+.++++|+++++++++ .+..+  .+   . ++|++|| +|++.++.++++++++|+
T Consensus       145 ~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~~~~~~~~~~~--~~---~-~~d~vid-~g~~~~~~~~~~l~~~G~  213 (302)
T 1iz0_A          145 VARAMGLRVLAAA----SRPEKLALPLALGAEEAATYAEVPERAK--AW---G-GLDLVLE-VRGKEVEESLGLLAHGGR  213 (302)
T ss_dssp             HHHHTTCEEEEEE----SSGGGSHHHHHTTCSEEEEGGGHHHHHH--HT---T-SEEEEEE-CSCTTHHHHHTTEEEEEE
T ss_pred             HHHHCCCEEEEEe----CCHHHHHHHHhcCCCEEEECCcchhHHH--Hh---c-CceEEEE-CCHHHHHHHHHhhccCCE
Confidence            9999999999988    4677888889999999998765 33211  12   2 4999999 999888999999999999


Q ss_pred             EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH---HHHcCCccccc-eeeccccHHHHHH
Q 017064          287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC---LAREGKLKYDM-ELVPFNNFQTALS  362 (378)
Q Consensus       287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~g~~~~~~-~~~~l~~~~~a~~  362 (378)
                      ++.+|........++...++.+++++.|++...+      ....+.++++++   ++++|++++.+ ++|+|+++++|++
T Consensus       214 ~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~  287 (302)
T 1iz0_A          214 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL------LREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFR  287 (302)
T ss_dssp             EEEC-------CCCCTTHHHHTTCEEEECCHHHH------TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHH
T ss_pred             EEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccch------hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHH
Confidence            9999865443334666678889999999876432      112356778888   99999998875 6899999999999


Q ss_pred             HHHccCCCCCceEeeC
Q 017064          363 KALGLHGSQPKQVIKF  378 (378)
Q Consensus       363 ~~~~~~~~g~kvvv~~  378 (378)
                      .+.+++..| |+|+++
T Consensus       288 ~~~~~~~~g-Kvvv~~  302 (302)
T 1iz0_A          288 ALLDRGHTG-KVVVRL  302 (302)
T ss_dssp             HTTCTTCCB-EEEEEC
T ss_pred             HHHcCCCCc-eEEEeC
Confidence            999888888 999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.2e-45  Score=341.81  Aligned_cols=312  Identities=22%  Similarity=0.303  Sum_probs=258.0

Q ss_pred             CcccceEEEccc--CCC-ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064           45 SPPSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (378)
Q Consensus        45 ~~~~~a~~~~~~--~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG  121 (378)
                      +.+||++++...  +.+ .+.+++++.|.|.+++|||+|||.++|||+.|.. +..  +  .++|.++|||++|+|++. 
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~--~--~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASK--R--LKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTT--T--CCTTSBCCCCEEEEEEEE-
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccC--c--CCCCcccccceEEEEEec-
Confidence            457999999885  433 1348999999999999999999999999999873 211  1  246788999999999995 


Q ss_pred             CCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCC----CCHhh-hhhccccHHHHHHHHHHHhccCCCCEEEEeC
Q 017064          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g  196 (378)
                       ++++|++||||++.    |+|+||+++++++++++|++    +++++ +++++.+++|||+++.+.+++++|++|||+|
T Consensus        79 -~v~~~~vGdrV~~~----g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~G  153 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ----SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSA  153 (333)
T ss_dssp             -SCTTSCTTCEEEEC----CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEES
T ss_pred             -CCCCCCCCCEEEec----CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEec
Confidence             67899999999985    78999999999999999997    88887 5889999999999998878999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-ccH-HHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEV-KNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       197 ~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~~~-~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      ++|++|++++|+++..|++|+++.    .++++.+.++++|+++++|..+ .+. +.+.+.+++  ++|++|||+|.+.+
T Consensus       154 a~ggiG~~~~~~~~~~G~~V~~~~----~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~--~~d~vi~~~g~~~~  227 (333)
T 1v3u_A          154 AAGAVGSVVGQIAKLKGCKVVGAA----GSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPD--GYDCYFDNVGGEFL  227 (333)
T ss_dssp             TTBHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTT--CEEEEEESSCHHHH
T ss_pred             CCCcHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCC--CCeEEEECCChHHH
Confidence            999999999999999999999888    4678888889999999998876 443 456666653  49999999999888


Q ss_pred             HHHHHhcccCCEEEEEecCCCC-----C-ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc
Q 017064          275 SKVLKFLSQGGTMVTYGGMSKK-----P-ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD  348 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  348 (378)
                      ..++++++++|+++.+|.....     + ...+...++.+++++.|+....+    .+....+.++++++++++|++++.
T Consensus       228 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~l~~~g~l~~~  303 (333)
T 1v3u_A          228 NTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW----QGDVREKALRDLMKWVLEGKIQYH  303 (333)
T ss_dssp             HHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGC----CTHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhc----chHHHHHHHHHHHHHHHCCCccCc
Confidence            9999999999999999965431     1 11245567889999999876543    123456789999999999999987


Q ss_pred             c-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          349 M-ELVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       349 ~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      . ..++|+++++||+.+.+++..| |+||++
T Consensus       304 ~~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~  333 (333)
T 1v3u_A          304 EHVTKGFENMPAAFIEMLNGANLG-KAVVTA  333 (333)
T ss_dssp             EEEEECGGGHHHHHHHHHTTCCSB-EEEEEC
T ss_pred             cccccCHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence            4 4689999999999999998888 999975

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=8.3e-46  Score=346.43  Aligned_cols=317  Identities=21%  Similarity=0.234  Sum_probs=259.7

Q ss_pred             CCcccceEEEccc--CCCcc-ceEEe--eeCCCC-CCCCcEEEEEEeeccChhhhhhhcccCCCC---CCCCccCCCcee
Q 017064           44 MSPPSKAVVYERE--GPPDS-VIKMI--ELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVR---PKVPAVGGYEGV  114 (378)
Q Consensus        44 ~~~~~~a~~~~~~--~~~~~-~~~~~--~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~  114 (378)
                      ||.+||++++...  +.+.. .++++  +.+.|. +++|||+|||.++|+|+.|. ...|.+...   ..+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            4567888888776  44442 27887  788886 89999999999999988875 444543211   136899999999


Q ss_pred             EEEEE--ecCCCCCCCCCCEEeeCCCCCcccccceeccCCc--eEEcCC---CCCHhhhhhccccHHHHHHHHHHHhccC
Q 017064          115 GEVYS--VGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSV--WHKVSK---DSPMEYAATIIVNPLTALRMLEDFTTLN  187 (378)
Q Consensus       115 G~V~~--vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~--~~~iP~---~~~~~~aa~~~~~~~ta~~~l~~~~~~~  187 (378)
                      |++++  +|+++++|++||||++.    |+|+||++++++.  ++++|+   +++++ +++++++++|||+++.+.++++
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~----g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~  154 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI----VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPK  154 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE----EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCC
T ss_pred             cceEEEEEecCCCCCCCCCEEEee----cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCC
Confidence            99999  99999999999999975    8899999999876  999996   45665 6788889999999998778999


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc--cHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL--EVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~--~~~~i~~~~~~~g~~Dv  264 (378)
                      +|++|||+|++|++|++++|+|++.|++|++++    .++++.+.++ ++|+++++|+.+.  ..+.+++.++ . ++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~----~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~-~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA----GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP-N-GIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT-T-CEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC-C-CCcE
Confidence            999999999999999999999999999999888    4788888888 7999999987653  3455666654 3 4999


Q ss_pred             EEeCCCCccHHHHHHhcccCCEEEEEecCCCC-----CccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064          265 GFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-----PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       265 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (378)
                      +|||+|.+.++.++++++++|+++.+|.....     +..++...++.+++++.|+....+     +....+.+++++++
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~l  303 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDF-----YDKYSKFLEFVLPH  303 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGG-----GGGHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhh-----hhhHHHHHHHHHHH
Confidence            99999998889999999999999999865431     234555678889999999765443     12245678999999


Q ss_pred             HHcCCccccce-eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064          340 AREGKLKYDME-LVPFNNFQTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       340 l~~g~~~~~~~-~~~l~~~~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      +++|++++.++ .|+|+++++||+.+.+++..| |+|+++
T Consensus       304 ~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~  342 (345)
T 2j3h_A          304 IREGKITYVEDVADGLEKAPEALVGLFHGKNVG-KQVVVV  342 (345)
T ss_dssp             HHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSS-EEEEES
T ss_pred             HHCCCCcCcccccCCHHHHHHHHHHHHcCCCce-EEEEEe
Confidence            99999998765 699999999999999999999 999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.6e-46  Score=353.83  Aligned_cols=301  Identities=14%  Similarity=0.173  Sum_probs=249.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCC-CcEEEEEEeeccChhhhhhhcc--cCCCCCCC---CccCCCceeEEEEEec
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEG--VYPVRPKV---PAVGGYEGVGEVYSVG  121 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e~~G~V~~vG  121 (378)
                      ||++++..++++   +++++.|.|.+++ +||+|||.++|||++|++.+.|  .++. .++   |.++|||++|+|++  
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E~~G~V~~--   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG---VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHEAIGVVEE--   74 (366)
T ss_dssp             CEEEEECTTSCC---CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--
T ss_pred             CeEEEEeCCCCc---eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcceEEEEEe--
Confidence            799999988863   7889999999999 9999999999999999999998  5542 245   89999999999999  


Q ss_pred             CCCCCCCCCCEEeeCC---------------------------C--CCcccccceeccCCceEEcCCCCCHhhhhhcccc
Q 017064          122 SAVTRLAPGDWVIPSP---------------------------P--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (378)
Q Consensus       122 ~~v~~~~~Gd~V~~~~---------------------------~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~  172 (378)
                      ++ ++|++||||++.+                           .  ..|+|+||+++++++++++|++++ ++|+ ++.+
T Consensus        75 ~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~  151 (366)
T 2cdc_A           75 SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQP  151 (366)
T ss_dssp             CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHH
T ss_pred             CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCc
Confidence            77 8999999999753                           1  359999999999999999999999 7765 6678


Q ss_pred             HHHHHHHHH--H--HhccC--C-------CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH---HHHHHHHhC
Q 017064          173 PLTALRMLE--D--FTTLN--S-------GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGL  236 (378)
Q Consensus       173 ~~ta~~~l~--~--~~~~~--~-------g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~  236 (378)
                      +.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+|++.|++|+++.+    ++   ++.++++++
T Consensus       152 ~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~----~~~~~~~~~~~~~~  226 (366)
T 2cdc_A          152 LADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANR----REPTEVEQTVIEET  226 (366)
T ss_dssp             HHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEES----SCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC----CccchHHHHHHHHh
Confidence            999999998  4  68898  8       999999999 99999999999999999998884    45   788899999


Q ss_pred             CCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cH-HHHHHhcccCCEEEEEecCCCCCccccchh---hhhcCce
Q 017064          237 GADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSA---FIFKDLS  311 (378)
Q Consensus       237 ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~  311 (378)
                      |++++ + .+...+.+.+ ++ . ++|++||++|.+ .+ +.++++++++|+++.+|........++...   ++.++++
T Consensus       227 ga~~v-~-~~~~~~~~~~-~~-~-~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  301 (366)
T 2cdc_A          227 KTNYY-N-SSNGYDKLKD-SV-G-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKT  301 (366)
T ss_dssp             TCEEE-E-CTTCSHHHHH-HH-C-CEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCE
T ss_pred             CCcee-c-hHHHHHHHHH-hC-C-CCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcE
Confidence            99998 7 5533456666 55 3 499999999985 67 899999999999999996554335566666   7889999


Q ss_pred             EEEEechhhhccccHHHHHHHHHHHHHHHHcCCc------cccc-eeeccccHHHHHHHH-HccCCCCCceEeeC
Q 017064          312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL------KYDM-ELVPFNNFQTALSKA-LGLHGSQPKQVIKF  378 (378)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~------~~~~-~~~~l~~~~~a~~~~-~~~~~~g~kvvv~~  378 (378)
                      +.|+....          .+.++++++++++|++      ++.+ ++|+|+++++||+.+ ..++..| |+||++
T Consensus       302 i~g~~~~~----------~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~g-Kvvi~~  365 (366)
T 2cdc_A          302 IIGLVNGQ----------KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEI-KIRILW  365 (366)
T ss_dssp             EEECCCCC----------HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCC-EEEEEC
T ss_pred             EEEecCCC----------HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCce-EEEEec
Confidence            99975431          2567889999999994      4554 689999999999994 3366677 999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.6e-36  Score=339.34  Aligned_cols=307  Identities=19%  Similarity=0.185  Sum_probs=252.7

Q ss_pred             EcccCCCccceEEeeeCCCC-C--CCCcEEEEEEeeccChhhhhhhcccCCCC------CCCCccCCCceeEEEEEecCC
Q 017064           53 YEREGPPDSVIKMIELPPVE-V--KENDVCVKMLAAPINPSDINRIEGVYPVR------PKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~p~-~--~~~eVlV~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ...++.... +.+.+.+... +  .++||+|+|.++|+|+.|++...|.++..      ...|.++|+|++|+|.     
T Consensus      1535 ~~~~g~l~s-l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----- 1608 (2512)
T 2vz8_A         1535 VLSRGDLSS-IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----- 1608 (2512)
T ss_dssp             ESSTTCTTS-EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET-----
T ss_pred             ccCCCCcCc-eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc-----
Confidence            334444433 6676665433 3  38999999999999999999999876432      1235789999999873     


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                           +||+|+++.. .|+|++|+++|++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|++|+
T Consensus      1609 -----vGdrV~g~~~-~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~ 1682 (2512)
T 2vz8_A         1609 -----SGRRVMGMVP-AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQ 1682 (2512)
T ss_dssp             -----TSCCEEEECS-SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHH
T ss_pred             -----cCCEEEEeec-CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHH
Confidence                 7999998865 4899999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVL  278 (378)
Q Consensus       204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~  278 (378)
                      +++|+||+.|++|++++    .+++|++.+++    +|+++++++++.+ .+.+++.+++.| +|+||||++++.+..++
T Consensus      1683 aAiqlAk~~Ga~Viat~----~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~G-vDvVld~~g~~~l~~~l 1757 (2512)
T 2vz8_A         1683 AAIAIALSRGCRVFTTV----GSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKG-VDLVLNSLAEEKLQASV 1757 (2512)
T ss_dssp             HHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCC-EEEEEECCCHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEe----CChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCC-ceEEEECCCchHHHHHH
Confidence            99999999999999998    57888888875    8999999987754 567888888876 99999999988889999


Q ss_pred             HhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccH
Q 017064          279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNF  357 (378)
Q Consensus       279 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~  357 (378)
                      ++++++|+++.+|.............++.+++++.+++...+.. ..+....+.++.+.+++.+|.+++. +++||++++
T Consensus      1758 ~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei 1836 (2512)
T 2vz8_A         1758 RCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFE-EGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKV 1836 (2512)
T ss_dssp             TTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTS-SCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTH
T ss_pred             HhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhh-hCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHH
Confidence            99999999999984322111122345677999999987655422 2334566777777788888999876 568999999


Q ss_pred             HHHHHHHHccCCCCCceEeeC
Q 017064          358 QTALSKALGLHGSQPKQVIKF  378 (378)
Q Consensus       358 ~~a~~~~~~~~~~g~kvvv~~  378 (378)
                      ++|++.+.+++..| |+|+++
T Consensus      1837 ~eA~~~l~~g~~~G-KvVi~~ 1856 (2512)
T 2vz8_A         1837 EAAFRYMAQGKHIG-KVVIQV 1856 (2512)
T ss_dssp             HHHHHHHHTTCCSS-EEEEEC
T ss_pred             HHHHHhhhccCccc-eEEEEC
Confidence            99999999999998 999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.92  E-value=3.8e-24  Score=183.59  Aligned_cols=191  Identities=21%  Similarity=0.256  Sum_probs=143.3

Q ss_pred             CceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH
Q 017064          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (378)
Q Consensus       152 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~  231 (378)
                      +.++++|+++++++|++++.++.|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++.    .++++.+
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~----~~~~~~~   77 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA----GSDAKRE   77 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE----SSHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEe----CCHHHHH
Confidence            568899999999999999999999999998878999999999999999999999999999999999888    4677888


Q ss_pred             HHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcC
Q 017064          232 KLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKD  309 (378)
Q Consensus       232 ~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  309 (378)
                      .++++|++.+++..+.+ .+.+.+.+.+.+ +|++|||+|...+..++++++++|+++.+|..... ...++. ..+.++
T Consensus        78 ~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~-~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~  155 (198)
T 1pqw_A           78 MLSRLGVEYVGDSRSVDFADEILELTDGYG-VDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGL-AALAKS  155 (198)
T ss_dssp             HHHTTCCSEEEETTCSTHHHHHHHHTTTCC-EEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEG-GGGTTT
T ss_pred             HHHHcCCCEEeeCCcHHHHHHHHHHhCCCC-CeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCCh-hHhcCC
Confidence            88899999988876544 456666665544 99999999988889999999999999999865421 222333 235688


Q ss_pred             ceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc
Q 017064          310 LSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM  349 (378)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  349 (378)
                      +++.++.. .+.....+....+.++++++++++|++++..
T Consensus       156 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          156 ASFSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             CEEEECCH-HHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cEEEEEeh-HHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            99887654 2221112334567899999999999998763

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.99  E-value=1.9e-11  Score=115.56  Aligned_cols=172  Identities=14%  Similarity=0.106  Sum_probs=125.4

Q ss_pred             ccCCCceeEEEEEecCCCCCCCCCCEEee--------CCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHH
Q 017064          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIP--------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR  178 (378)
Q Consensus       107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~--------~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~  178 (378)
                      ...|++.++.|.++|++++++.+|+.++.        .....|++++|+..+...++++|++++.+.++. ..+..++|.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHH
Confidence            45789999999999999999999998732        011147788998888888999999988777655 335667887


Q ss_pred             HHHHHhcc---CCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHH
Q 017064          179 MLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVK  253 (378)
Q Consensus       179 ~l~~~~~~---~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~  253 (378)
                      ++......   .+|++|+|+|+ |++|.++++.++..|+ +|+++.+    +.++. ++++++|++ +++..     ++.
T Consensus       154 av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r----~~~ra~~la~~~g~~-~~~~~-----~l~  222 (404)
T 1gpj_A          154 AVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR----TYERAVELARDLGGE-AVRFD-----ELV  222 (404)
T ss_dssp             HHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS----SHHHHHHHHHHHTCE-ECCGG-----GHH
T ss_pred             HHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHcCCc-eecHH-----hHH
Confidence            77542212   57999999999 9999999999999999 7776663    56664 677788876 33322     233


Q ss_pred             HHhcCCCCCcEEEeCCCCccH---HHHHHh--c--ccCCEEEEEecC
Q 017064          254 GLLANLPEPALGFNCVGGNSA---SKVLKF--L--SQGGTMVTYGGM  293 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~~~---~~~~~~--l--~~~G~~v~~g~~  293 (378)
                      +...   ++|+||+|++.+..   ...+..  +  +++|.++.++..
T Consensus       223 ~~l~---~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          223 DHLA---RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HHHH---TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             HHhc---CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            3333   39999999986432   345655  4  567777777743

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.96  E-value=3.4e-09  Score=98.63  Aligned_cols=145  Identities=14%  Similarity=0.115  Sum_probs=99.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +++|+|+|+ |++|+++++.++.+|++|+++.    .++++.+.+++++++.  +++.+..   .+.+...   ++|+||
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~d----r~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~DvVI  235 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFD----INVERLSYLETLFGSRVELLYSNSA---EIETAVA---EADLLI  235 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGSEEEECCHH---HHHHHHH---TCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe----CCHHHHHHHHHhhCceeEeeeCCHH---HHHHHHc---CCCEEE
Confidence            489999999 9999999999999999888777    3678888887766543  3333322   2333333   399999


Q ss_pred             eCCCCcc-------HHHHHHhcccCCEEEEEecCCCC------CccccchhhhhcCceEEEEech-hhhcc-ccHHHHHH
Q 017064          267 NCVGGNS-------ASKVLKFLSQGGTMVTYGGMSKK------PITVSTSAFIFKDLSLKGFWLQ-KWLSS-EKATECRN  331 (378)
Q Consensus       267 d~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~  331 (378)
                      +|++.+.       ....++.++++|+++.++...+.      +.+++...+..+++++.+...- ..... ........
T Consensus       236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            9998643       46788999999999999865443      2344555566788888775421 11110 01112255


Q ss_pred             HHHHHHHHHHcCC
Q 017064          332 MIDYLLCLAREGK  344 (378)
Q Consensus       332 ~~~~~~~~l~~g~  344 (378)
                      .++.+++++.+|.
T Consensus       316 ~~~~l~~l~~~G~  328 (361)
T 1pjc_A          316 TLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHGG
T ss_pred             HHHHHHHHHhCCc
Confidence            6788899998884

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.75  E-value=8.3e-08  Score=89.55  Aligned_cols=147  Identities=18%  Similarity=0.195  Sum_probs=91.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++.+    ++++.+.+++ +|++...+..+  .+.+.+...   ++|+||
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~----~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~---~~DvVi  234 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDV----NHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ---HADLLI  234 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH---HCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHhcCceEEEecCC--HHHHHHHHh---CCCEEE
Confidence            3589999999 99999999999999999888873    6677766655 78764333222  123334333   299999


Q ss_pred             eCCCCcc-------HHHHHHhcccCCEEEEEecCCCC------CccccchhhhhcCceEEEEechhhhccccHH--HHHH
Q 017064          267 NCVGGNS-------ASKVLKFLSQGGTMVTYGGMSKK------PITVSTSAFIFKDLSLKGFWLQKWLSSEKAT--ECRN  331 (378)
Q Consensus       267 d~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  331 (378)
                      +|++.+.       .+..++.++++|.++.++...+.      +.+++...+..+++++.+...-.-.......  ....
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            9999653       47889999999999999855432      2223333455678887775421100110011  1245


Q ss_pred             HHHHHHHHHHcCC
Q 017064          332 MIDYLLCLAREGK  344 (378)
Q Consensus       332 ~~~~~~~~l~~g~  344 (378)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            6778888888774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.73  E-value=2.5e-08  Score=93.55  Aligned_cols=122  Identities=11%  Similarity=0.172  Sum_probs=84.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCc----------------c---
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ----------------L---  247 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~----------------~---  247 (378)
                      ++++|+|+|+ |.+|+.++++|+.+|++|+++.+    ++++.+.++++|++.+ ++..+                .   
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~----~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~  245 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDV----RAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK  245 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----CSTTHHHHHHTTCEECCC-----------------------C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHh
Confidence            6899999998 99999999999999998766653    4556667778998765 23311                0   


Q ss_pred             -cHHHHHHHhcCCCCCcEEEeCC---CCcc---H-HHHHHhcccCCEEEEEecCCCCCcc--ccchhhhhcCceEEEEec
Q 017064          248 -EVKNVKGLLANLPEPALGFNCV---GGNS---A-SKVLKFLSQGGTMVTYGGMSKKPIT--VSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       248 -~~~~i~~~~~~~g~~Dvvid~~---g~~~---~-~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~  317 (378)
                       ..+.+.+...+   +|+||+|+   |.+.   + ...++.|++++.++.++...+....  .+...+..+++++.++..
T Consensus       246 ~~~~~l~~~~~~---aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~  322 (384)
T 1l7d_A          246 KQAEAVLKELVK---TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN  322 (384)
T ss_dssp             CHHHHHHHHHTT---CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS
T ss_pred             hhHHHHHHHhCC---CCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC
Confidence             11224454543   99999999   5322   2 7789999999999999854333322  233345568888888653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.72  E-value=8e-08  Score=89.82  Aligned_cols=147  Identities=16%  Similarity=0.125  Sum_probs=95.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +|++|+|+|+ |.+|+.+++.++.+|++|+++.    .++++.+.+++ +|++...+...  ...+.+...   ++|+||
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d----~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l~---~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLD----INIDKLRQLDAEFCGRIHTRYSS--AYELEGAVK---RADLVI  236 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTTTSSEEEECC--HHHHHHHHH---HCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe----CCHHHHHHHHHhcCCeeEeccCC--HHHHHHHHc---CCCEEE
Confidence            4789999999 9999999999999999988777    36777777765 78763222211  122333333   299999


Q ss_pred             eCCCCcc-------HHHHHHhcccCCEEEEEecCCC------CCccccchhhhhcCceEEEEechhhhccccH--HHHHH
Q 017064          267 NCVGGNS-------ASKVLKFLSQGGTMVTYGGMSK------KPITVSTSAFIFKDLSLKGFWLQKWLSSEKA--TECRN  331 (378)
Q Consensus       267 d~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  331 (378)
                      +|++.+.       ....++.++++|.++.++...+      .+.+++...+..+++.+.+..--........  .....
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~  316 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNA  316 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHH
Confidence            9998653       4788999999999999985433      2333344445567777655432111011100  11234


Q ss_pred             HHHHHHHHHHcCC
Q 017064          332 MIDYLLCLAREGK  344 (378)
Q Consensus       332 ~~~~~~~~l~~g~  344 (378)
                      .++.+++++.+|.
T Consensus       317 ~~~~~~~l~~~g~  329 (377)
T 2vhw_A          317 TMPYVLELADHGW  329 (377)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCh
Confidence            4567777777763

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.47  E-value=1.1e-06  Score=82.71  Aligned_cols=122  Identities=11%  Similarity=0.074  Sum_probs=84.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccC--------------ccc----
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TES--------------QLE----  248 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~--------------~~~----  248 (378)
                      ++++|+|.|+ |.+|+.++++|+.+|++|+++.    .+.++.+.++++|++.+. +..              ...    
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHH
Confidence            5789999998 9999999999999999877765    356666777889987652 211              000    


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCCc-----c-H-HHHHHhcccCCEEEEEecCCCCCccccc--h-hhhhcCceEEEEec
Q 017064          249 VKNVKGLLANLPEPALGFNCVGGN-----S-A-SKVLKFLSQGGTMVTYGGMSKKPITVST--S-AFIFKDLSLKGFWL  317 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~~-----~-~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~-~~~~~~~~~~~~~~  317 (378)
                      .+.+.+...+   +|+||++++.+     . + ...++.|++++.++.++...+.......  . .+..+++++.|+..
T Consensus       246 ~~~l~e~~~~---aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          246 MELFAAQAKE---VDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHHHHHHH---CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSC
T ss_pred             HHHHHHHhCC---CCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCC
Confidence            0124454543   99999996321     2 2 6789999999999999854333333322  2 25568899998653

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.45  E-value=1.5e-06  Score=83.24  Aligned_cols=170  Identities=12%  Similarity=0.073  Sum_probs=108.6

Q ss_pred             CCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHh
Q 017064          105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT  184 (378)
Q Consensus       105 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~  184 (378)
                      +|..+ +++.|+|+++|.+|+++.      .... .|.+...+....+.+.+   .. +   -.++....++|+++.+..
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~~-~Gilv~~~~~vn~sVae---~~-~---r~l~~~~~s~~~g~~r~~  268 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFAA-AGDLAFPAINVNDSVTK---SK-F---DNKYGTRHSLIDGINRGT  268 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHHH-TTCCCSCEEECTTSHHH---HT-T---HHHHHHHHHHHHHHHHHH
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHHH-cCCEEEecCCccHHHHH---HH-H---hhhhhhhhhhhHHHHhcc
Confidence            34445 799999999999988761      0000 12222221111111111   00 0   111223455677765432


Q ss_pred             c-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          185 T-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       185 ~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      + ..+|++|+|.|. |.+|..+++.++.+|++|+++.    .++++.+.++++|++. ++     .++   ...   +.|
T Consensus       269 ~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d----~~~~~~~~A~~~Ga~~-~~-----l~e---~l~---~aD  331 (494)
T 3ce6_A          269 DALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTE----IDPINALQAMMEGFDV-VT-----VEE---AIG---DAD  331 (494)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEE-CC-----HHH---HGG---GCS
T ss_pred             CCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCEE-ec-----HHH---HHh---CCC
Confidence            2 788999999998 9999999999999999988776    4677777888899863 21     122   222   399


Q ss_pred             EEEeCCCCcc-H-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcC
Q 017064          264 LGFNCVGGNS-A-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKD  309 (378)
Q Consensus       264 vvid~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  309 (378)
                      +|++|+|... + ...++.++++|+++.+|...   ..++...+..+.
T Consensus       332 vVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~---~eId~~aL~~~a  376 (494)
T 3ce6_A          332 IVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD---NEIDMAGLERSG  376 (494)
T ss_dssp             EEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG---GGBCHHHHHHTT
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC---CccCHHHHHHhh
Confidence            9999999755 3 47899999999999998432   234444554433

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.26  E-value=1.9e-06  Score=75.46  Aligned_cols=125  Identities=12%  Similarity=0.001  Sum_probs=79.0

Q ss_pred             CceEEcCCCCCHhhhhhccc----cHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH
Q 017064          152 SVWHKVSKDSPMEYAATIIV----NPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD  227 (378)
Q Consensus       152 ~~~~~iP~~~~~~~aa~~~~----~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~  227 (378)
                      ..+++.|+...+.+.+....    ....+.+.+ ....+.++++||..|+ | .|..+..+++. +.+++++.    .++
T Consensus        52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD----~~~  123 (248)
T 2yvl_A           52 GFEVYRPTLEEIILLGFERKTQIIYPKDSFYIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFE----AVE  123 (248)
T ss_dssp             TEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEC----SCH
T ss_pred             EEEEeCCCHHHHHHhcCcCCCCcccchhHHHHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEe----cCH
Confidence            34556665544443332211    133343344 4478899999999998 5 69999999998 77887776    466


Q ss_pred             HHHHHHHh----CCC-c--EEEccCcccHHHHHHHh-cCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          228 EAKEKLKG----LGA-D--EVFTESQLEVKNVKGLL-ANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       228 ~~~~~~~~----~ga-~--~vi~~~~~~~~~i~~~~-~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      +..+.+++    .|. +  .++..+      +.... .+. ++|+|+.+.+.+  .+..+.+.|+++|+++...
T Consensus       124 ~~~~~a~~~~~~~~~~~~~~~~~~d------~~~~~~~~~-~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          124 EFYKTAQKNLKKFNLGKNVKFFNVD------FKDAEVPEG-IFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             HHHHHHHHHHHHTTCCTTEEEECSC------TTTSCCCTT-CBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCcEEEEEcC------hhhcccCCC-cccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            66666653    343 1  122111      11112 222 499999887753  4588999999999998875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.25  E-value=4.7e-06  Score=76.92  Aligned_cols=121  Identities=10%  Similarity=0.130  Sum_probs=83.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc---------Cc--------ccHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE---------SQ--------LEVK  250 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~---------~~--------~~~~  250 (378)
                      ++.+|+|.|+ |.+|+.++++|+.+|++|++..    .+.++.+.++++|++.+-..         ..        ...+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D----~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYD----VRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEEC----SSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence            5789999999 9999999999999999988776    36777788888998754210         00        0112


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc-----c--HHHHHHhcccCCEEEEEecCCCCCccc--cchhhhhcCceEEEEe
Q 017064          251 NVKGLLANLPEPALGFNCVGGN-----S--ASKVLKFLSQGGTMVTYGGMSKKPITV--STSAFIFKDLSLKGFW  316 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~-----~--~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~  316 (378)
                      .+.+...   +.|+||.++..+     .  ....++.|++++.+|.++...+.++..  +...+..+++++.+..
T Consensus       258 ~l~e~l~---~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~  329 (381)
T 3p2y_A          258 ALEDAIT---KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPL  329 (381)
T ss_dssp             HHHHHHT---TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCS
T ss_pred             HHHHHHh---cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeC
Confidence            3444444   399999986322     1  378899999999999998655544432  1112334567776654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.14  E-value=1.1e-05  Score=75.00  Aligned_cols=121  Identities=18%  Similarity=0.144  Sum_probs=83.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc-------------Cc----c---
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-------------SQ----L---  247 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~-------------~~----~---  247 (378)
                      ++.+|+|.|+ |.+|+.++++|+.+|++|++..    .+.++++.++++|++.+...             ..    .   
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D----~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~  263 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATD----VRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV  263 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SSTTHHHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence            5689999999 9999999999999999988766    36677788888988643211             00    0   


Q ss_pred             -cHHHHHHHhcCCCCCcEEEeCCCCc-------cHHHHHHhcccCCEEEEEecCCCCCccc--cchhhhhcCceEEEEe
Q 017064          248 -EVKNVKGLLANLPEPALGFNCVGGN-------SASKVLKFLSQGGTMVTYGGMSKKPITV--STSAFIFKDLSLKGFW  316 (378)
Q Consensus       248 -~~~~i~~~~~~~g~~Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~  316 (378)
                       ..+.+.+...+   .|+||.|+..+       .....++.|++++.+|.++...+.+...  +...+..+++++.+..
T Consensus       264 ~~~~~l~e~l~~---aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          264 KQAALVAEHIAK---QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHHHHHHT---CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             hhHhHHHHHhcC---CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence             01234444443   99999996422       1278999999999999998544444332  1122335678887765

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.98  E-value=0.00014  Score=67.85  Aligned_cols=101  Identities=15%  Similarity=0.135  Sum_probs=74.4

Q ss_pred             HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064          175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (378)
Q Consensus       175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~  253 (378)
                      ..+.++.+..+ .-.|++|+|.|. |.+|...++.++.+|++|+++.    .++.+...+...|+...         .+.
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D----~dp~ra~~A~~~G~~v~---------~Le  270 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTE----IDPICALQACMDGFRLV---------KLN  270 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEEC---------CHH
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEe----CChhhhHHHHHcCCEec---------cHH
Confidence            34556655333 458999999999 9999999999999999988776    34555555666675321         133


Q ss_pred             HHhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEec
Q 017064          254 GLLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~  292 (378)
                      +...   ..|+++.|.|... + ...+..|++++.++.+|-
T Consensus       271 eal~---~ADIVi~atgt~~lI~~e~l~~MK~gailINvgr  308 (435)
T 3gvp_A          271 EVIR---QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGH  308 (435)
T ss_dssp             HHTT---TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSS
T ss_pred             HHHh---cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecC
Confidence            3333   3999999988644 3 588999999999999883

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.96  E-value=4.8e-05  Score=66.75  Aligned_cols=107  Identities=17%  Similarity=0.160  Sum_probs=69.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc-C--c-ccHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-S--Q-LEVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~-~--~-~~~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+..++..+.+++.|.+...-. +  + .+++. +.+.....|++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            579999999999999999999999999998887532111222334455666544321 2  2 12222 33344455579


Q ss_pred             cEEEeCCCCcc--------------------------HHHHHHhc---ccCCEEEEEecCC
Q 017064          263 ALGFNCVGGNS--------------------------ASKVLKFL---SQGGTMVTYGGMS  294 (378)
Q Consensus       263 Dvvid~~g~~~--------------------------~~~~~~~l---~~~G~~v~~g~~~  294 (378)
                      |++++++|...                          .+.++..|   ..+|++|.++...
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            99999998421                          03345555   2469999998554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.83  E-value=0.00021  Score=54.29  Aligned_cols=93  Identities=12%  Similarity=0.003  Sum_probs=63.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+.+|+|.|+ |.+|...++.+...| .+|+++.+    ++++.+.+...+...+. .+-.+.+.+.+...   ++|+||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r----~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~---~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADH----DLAALAVLNRMGVATKQ-VDAKDEAGLAKALG---GFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEES----CHHHHHHHHTTTCEEEE-CCTTCHHHHHHHTT---TCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeC----CHHHHHHHHhCCCcEEE-ecCCCHHHHHHHHc---CCCEEE
Confidence            3568999999 999999999999999 78877774    67777777766665432 23233345555554   399999


Q ss_pred             eCCCCccHHHHH-HhcccCCEEEE
Q 017064          267 NCVGGNSASKVL-KFLSQGGTMVT  289 (378)
Q Consensus       267 d~~g~~~~~~~~-~~l~~~G~~v~  289 (378)
                      +|++........ .+...+..++.
T Consensus        75 ~~~~~~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           75 SAAPFFLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCEEEC
T ss_pred             ECCCchhhHHHHHHHHHhCCCEEE
Confidence            999866554444 34444555543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.83  E-value=0.00011  Score=66.19  Aligned_cols=107  Identities=14%  Similarity=0.120  Sum_probs=66.2

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .|+++||+|++|  ++|...++.+...|++|+++.+.....+...+...+.|....+..+-.+.+.+.+    .....|+
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999986  9999999888889999999886532112222333445544444333322222222    1111235


Q ss_pred             CcEEEeCCCCcc---------------H---------------HHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS---------------A---------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~---------------~---------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|...               +               +.++..++++|++|.++...
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~  171 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYG  171 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehh
Confidence            999999998421               0               22344566789999998543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.82  E-value=0.00016  Score=62.91  Aligned_cols=80  Identities=14%  Similarity=0.156  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +++++||+|++|++|...++.+...|++|+++.+    +.++.+. ..++....++..+-.+.+.+.+.....+++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR----TQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999899999999885    4444433 3344323344334344455666555545699999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=1.7e-05  Score=63.24  Aligned_cols=105  Identities=10%  Similarity=0.066  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHH
Q 017064          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN  251 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~  251 (378)
                      .+.++.++.. .....+++|+|.|+ |.+|...++.++..|++|+++.+    ++++.+ +++++|.+.. ...     .
T Consensus         6 ~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r----~~~~~~~~a~~~~~~~~-~~~-----~   73 (144)
T 3oj0_A            6 VSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGR----NIDHVRAFAEKYEYEYV-LIN-----D   73 (144)
T ss_dssp             CSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEES----CHHHHHHHHHHHTCEEE-ECS-----C
T ss_pred             ccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC----CHHHHHHHHHHhCCceE-eec-----C
Confidence            3456666655 33345899999998 99999999999889999655553    455544 4567775432 122     1


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          252 VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      +.+...   ++|+||+|++.+........+++++.++.++.
T Consensus        74 ~~~~~~---~~Divi~at~~~~~~~~~~~l~~g~~vid~~~  111 (144)
T 3oj0_A           74 IDSLIK---NNDVIITATSSKTPIVEERSLMPGKLFIDLGN  111 (144)
T ss_dssp             HHHHHH---TCSEEEECSCCSSCSBCGGGCCTTCEEEECCS
T ss_pred             HHHHhc---CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccC
Confidence            222233   39999999997532112277889999988873

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.79  E-value=0.0001  Score=65.27  Aligned_cols=104  Identities=22%  Similarity=0.290  Sum_probs=70.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-F--TESQL-EVKN-VKGLLANLP  260 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g  260 (378)
                      -.|+.+||+|+++++|.+.++.+...|++|+++.+    ++++.+ .++++|.... +  |-.+. ++++ +.+.....|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r----~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGR----RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999885    445544 4456665433 2  22221 2222 222222334


Q ss_pred             CCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|++++++|...                          .+.++..|+++|++|.++...
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~  162 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTA  162 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehh
Confidence            5999999998521                          134567888899999998543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.78  E-value=0.0002  Score=64.34  Aligned_cols=92  Identities=12%  Similarity=0.134  Sum_probs=70.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -.|++|+|.|+ |.+|..+++.++.+|++|++..+    +.++.+.+.++|+..+ +.     ..+.+...   ..|+|+
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr----~~~~~~~~~~~g~~~~-~~-----~~l~~~l~---~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGAR----ESDLLARIAEMGMEPF-HI-----SKAAQELR---DVDVCI  218 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTSEEE-EG-----GGHHHHTT---TCSEEE
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHCCCeec-Ch-----hhHHHHhc---CCCEEE
Confidence            46899999998 99999999999999999888774    5556566667887532 21     12333333   399999


Q ss_pred             eCCCCccH-HHHHHhcccCCEEEEEec
Q 017064          267 NCVGGNSA-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       267 d~~g~~~~-~~~~~~l~~~G~~v~~g~  292 (378)
                      .++....+ ...+..+++++.++.++.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecC
Confidence            99986554 567889999999999873

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.78  E-value=6.8e-05  Score=66.88  Aligned_cols=99  Identities=11%  Similarity=0.065  Sum_probs=69.3

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhc
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      .++++++|++||..|+ |..|..++.+|+..|++|+++.    .+++..+.+++    .|.+.+ .....+..+   +..
T Consensus       116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gID----is~~~l~~Ar~~~~~~gl~~v-~~v~gDa~~---l~d  186 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVE----IEPDIAELSRKVIEGLGVDGV-NVITGDETV---IDG  186 (298)
T ss_dssp             HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEE----SSHHHHHHHHHHHHHHTCCSE-EEEESCGGG---GGG
T ss_pred             HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEE----CCHHHHHHHHHHHHhcCCCCe-EEEECchhh---CCC
Confidence            3578899999999999 7777888888888899999987    46777666653    354222 111111122   222


Q ss_pred             CCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          258 NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      +  .||+|+.+...+    .++...+.|+|||+++...
T Consensus       187 ~--~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          187 L--EFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             C--CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             C--CcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            2  499999766543    3578889999999999876

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.75  E-value=0.00012  Score=64.82  Aligned_cols=84  Identities=14%  Similarity=0.187  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCcE-EEccCcccHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GADE-VFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--ga~~-vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..+..++..+.++..  +... .+..+-.+.+.+.+.....|++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            4789999999999999999988889999999886321111112222222  2221 222222333444444444446999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus        89 lv~nAg~   95 (267)
T 3t4x_A           89 LINNLGI   95 (267)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.73  E-value=0.00038  Score=65.08  Aligned_cols=100  Identities=13%  Similarity=0.041  Sum_probs=73.0

Q ss_pred             HHHHHHHHh-ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~-~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+.. ..-.|++|+|.|. |.+|...++.++.+|++|+++.+    ++.+...+...|+..+ +        +.+
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~----dp~~a~~A~~~G~~vv-~--------LeE  298 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEV----DPICALQAAMDGFEVV-T--------LDD  298 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----SHHHHHHHHHTTCEEC-C--------HHH
T ss_pred             HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeC----CcchhhHHHhcCceec-c--------HHH
Confidence            445554433 3567999999998 99999999999999999988762    4444444555666431 1        223


Q ss_pred             HhcCCCCCcEEEeCCCCccH--HHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~  292 (378)
                      ...   ..|+|+.++|...+  ...+..|++++.++.+|-
T Consensus       299 lL~---~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGR  335 (464)
T 3n58_A          299 AAS---TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGH  335 (464)
T ss_dssp             HGG---GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSS
T ss_pred             HHh---hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCC
Confidence            333   39999999987543  688999999999999883

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.73  E-value=0.00013  Score=64.89  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=65.7

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCC-c--EEEccCcccHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGA-D--EVFTESQLEVK  250 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga-~--~vi~~~~~~~~  250 (378)
                      +.....+.++++||-.|+ |. |..+..+++..  +.+++++.    .+++..+.++    ..|. +  .++..+   ..
T Consensus       104 i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d---~~  174 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYE----KREEFAKLAESNLTKWGLIERVTIKVRD---IS  174 (277)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEEC----CCHHHHHHHHHHHHHTTCGGGEEEECCC---GG
T ss_pred             HHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEE----CCHHHHHHHHHHHHHcCCCCCEEEEECC---HH
Confidence            334478899999999998 54 88999999985  45777665    4666665554    3454 1  122111   11


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          251 NVKGLLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      +   .... +.+|+|+.....+  .+..+.+.|+++|.++...
T Consensus       175 ~---~~~~-~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          175 E---GFDE-KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             G---CCSC-CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             H---cccC-CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            1   1222 2499999876643  4588899999999998775

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.72  E-value=0.00015  Score=65.17  Aligned_cols=107  Identities=15%  Similarity=0.129  Sum_probs=65.6

Q ss_pred             CCCCEEEEeCCCch--HHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHH----HHhcCC
Q 017064          187 NSGDSIVQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       187 ~~g~~VlV~g~~g~--~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~----~~~~~~  259 (378)
                      -.|+++||+|++|+  +|...++.+...|++|+++.+... ..++. +...+.+....+..+-.+.+.+.    +.....
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            45789999999855  999999988889999998875311 11222 22233454333333322222222    222222


Q ss_pred             CCCcEEEeCCCCcc------------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      |++|++|+++|...                              .+.++..++++|++|.++...
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~  172 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG  172 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence            35999999998421                              023455667789999998543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.70  E-value=0.00025  Score=62.29  Aligned_cols=107  Identities=13%  Similarity=0.190  Sum_probs=66.2

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEE--ccCcc-cHHH-HHHHhcCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVF--TESQL-EVKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi--~~~~~-~~~~-i~~~~~~~  259 (378)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.+.+...++-.+.+++++..  ..+  |-.+. +++. +.+.....
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999876  8999999988899999999887543223333444455432  222  22221 2221 22222222


Q ss_pred             CCCcEEEeCCCCcc---------------H---------------HHHHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNS---------------A---------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~---------------~---------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      |++|++++++|...               +               +.....++.+|++|.++...
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~  149 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLG  149 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            35999999988310               0               12334567889999998554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.69  E-value=0.00041  Score=59.28  Aligned_cols=99  Identities=13%  Similarity=0.025  Sum_probs=66.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHH-HcCCcEEEEecCCCCcHH-HHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDE-AKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~~~~~~~-~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++|||+|++|++|...++.+. ..|++|+++.|    +++ +.+.+. ......++..+-.+.+.+.+...+   +|++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGR----QLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTN---AEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES----SHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec----CccccchhhccCCCceEEEECCCCCHHHHHHHHcC---CCEEE
Confidence            469999999999999998887 89999999985    444 444442 222223333333445566666653   99999


Q ss_pred             eCCCCcc--HHHHHHhcccC--CEEEEEecCCC
Q 017064          267 NCVGGNS--ASKVLKFLSQG--GTMVTYGGMSK  295 (378)
Q Consensus       267 d~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~  295 (378)
                      +++|...  .+..++.++..  |++|+++....
T Consensus        79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           79 VGAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             ESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             EcCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            9999632  34455555433  68999886543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.69  E-value=0.00034  Score=60.71  Aligned_cols=79  Identities=16%  Similarity=0.136  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+.++||+|++|++|...++.+...|++|+++.+    +.++.+.+ ++..-..++..+-.+.+.+.+.....+++|++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR----TNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999889999999885    34443333 333222333333334455666555555699999


Q ss_pred             eCCC
Q 017064          267 NCVG  270 (378)
Q Consensus       267 d~~g  270 (378)
                      +++|
T Consensus        82 ~~Ag   85 (244)
T 1cyd_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9998

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.68  E-value=0.00054  Score=60.63  Aligned_cols=104  Identities=17%  Similarity=0.289  Sum_probs=67.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.   +.++.    +.++..|.... +..+-.+.+.+    .+....
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN---STKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998999999987753   23322    33345565433 22222222222    222222


Q ss_pred             CCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          259 LPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .|++|++|+++|...                          .+.++..+.++|++|.++...
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            235999999998421                          133566777899999998654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.68  E-value=0.00029  Score=62.18  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=64.3

Q ss_pred             CCCEEEEeCCCch--HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--cEEE--ccCcc-cH----HHHHHHh
Q 017064          188 SGDSIVQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEVF--TESQL-EV----KNVKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~--~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga--~~vi--~~~~~-~~----~~i~~~~  256 (378)
                      .|+++||+|++|.  +|...++.+...|++|+++.+.....+...+...+++.  -.++  |-.+. .+    +++.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4789999999955  99999988888899999888653211222333444543  2222  22221 22    2233333


Q ss_pred             cCCCCCcEEEeCCCCcc------------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          257 ANLPEPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                         |++|++|+++|...                              .+.++..++++|++|.++...
T Consensus        86 ---g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  150 (266)
T 3oig_A           86 ---GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLG  150 (266)
T ss_dssp             ---SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred             ---CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccc
Confidence               34999999998421                              022344566789999998543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.68  E-value=0.0001  Score=64.52  Aligned_cols=83  Identities=16%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCc-ccHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQ-LEVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~~g~~  262 (378)
                      +|+++||+|+++++|.+.++.+...|++|+++.+..+..++-.+.+++.|.+...   |-.+ .+++. +.+.....|++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999998899999998875321111222344556765443   2222 12222 22222233459


Q ss_pred             cEEEeCCC
Q 017064          263 ALGFNCVG  270 (378)
Q Consensus       263 Dvvid~~g  270 (378)
                      |++++++|
T Consensus        86 DiLVNNAG   93 (254)
T 4fn4_A           86 DVLCNNAG   93 (254)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999998

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.67  E-value=0.00023  Score=61.49  Aligned_cols=98  Identities=14%  Similarity=0.252  Sum_probs=64.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|||+|++|.+|...++.+...|.+|++++|.    +++.+.+...++..++..+-.  +.+.+...   ++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~----~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~---~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN----EEQGPELRERGASDIVVANLE--EDFSHAFA---SIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----GGGHHHHHHTTCSEEEECCTT--SCCGGGGT---TCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC----hHHHHHHHhCCCceEEEcccH--HHHHHHHc---CCCEEEE
Confidence            46899999999999999999999899999999964    444555555566233322211  33444444   3999999


Q ss_pred             CCCCcc--------------HHHHHHhcc--cCCEEEEEecCC
Q 017064          268 CVGGNS--------------ASKVLKFLS--QGGTMVTYGGMS  294 (378)
Q Consensus       268 ~~g~~~--------------~~~~~~~l~--~~G~~v~~g~~~  294 (378)
                      ++|...              ....++.++  ..+++|+++...
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            999532              122333333  247999998644

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.65  E-value=0.00042  Score=61.56  Aligned_cols=80  Identities=13%  Similarity=0.160  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCC-c--EEEccCcccHHHHHH----Hh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGA-D--EVFTESQLEVKNVKG----LL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga-~--~vi~~~~~~~~~i~~----~~  256 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .++.+    .++..|. .  .++..+-.+.+.+.+    ..
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCART----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC----hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999988899999998863    33332    2334442 1  222222222222221    11


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...+++|++|+++|.
T Consensus       107 ~~~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          107 SQHSGVDICINNAGL  121 (279)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            112249999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.65  E-value=0.0003  Score=62.00  Aligned_cols=81  Identities=20%  Similarity=0.183  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHHH----Hhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVKG----LLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~~----~~~  257 (378)
                      -.++++||+|++|++|...++.+...|++|+++.+.    .++.+    .+...|.... +..+-.+.+.+.+    ...
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD----VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999998888889999998863    33332    2334454332 2222222222221    111


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|.+|++|+++|.
T Consensus       103 ~~g~id~lv~~Ag~  116 (262)
T 3rkr_A          103 AHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence            12359999999985

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.61  E-value=0.00088  Score=61.44  Aligned_cols=81  Identities=9%  Similarity=0.067  Sum_probs=59.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC------CCcEEEccCcccHHHHHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL------GADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~------ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .+.+|||+||+|.+|...++.+...|.+|+++++......+..+.++..      .--.++..+-.+.+.+.+...+   
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---  100 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG---  100 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC---
Confidence            3579999999999999999999889999999998755555555555543      2223343444445566666653   


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|+||++++.
T Consensus       101 ~d~Vih~A~~  110 (351)
T 3ruf_A          101 VDHVLHQAAL  110 (351)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999985

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.61  E-value=0.0005  Score=64.33  Aligned_cols=117  Identities=10%  Similarity=0.057  Sum_probs=79.7

Q ss_pred             HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+... .-.|++|+|.|. |.+|...++.++.+|++|+++.    .++.+...+...|+...         .+.+
T Consensus       197 lldgi~ratg~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D----~~p~~a~~A~~~G~~~~---------sL~e  262 (436)
T 3h9u_A          197 LVDGIKRATDVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTE----VDPINALQAAMEGYQVL---------LVED  262 (436)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEEC---------CHHH
T ss_pred             HHHHHHHhcCCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEC----CChhhhHHHHHhCCeec---------CHHH
Confidence            3444443233 346899999998 9999999999999999988866    35556555666776432         2333


Q ss_pred             HhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceE
Q 017064          255 LLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL  312 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  312 (378)
                      ...+   .|+++.+.+... + ...+..|+++..++.++   ..+..++...+..+..++
T Consensus       263 al~~---ADVVilt~gt~~iI~~e~l~~MK~gAIVINvg---Rg~vEID~~~L~~~~~~~  316 (436)
T 3h9u_A          263 VVEE---AHIFVTTTGNDDIITSEHFPRMRDDAIVCNIG---HFDTEIQVAWLKANAKER  316 (436)
T ss_dssp             HTTT---CSEEEECSSCSCSBCTTTGGGCCTTEEEEECS---SSGGGBCHHHHHHHCSEE
T ss_pred             HHhh---CCEEEECCCCcCccCHHHHhhcCCCcEEEEeC---CCCCccCHHHHHhhcCce
Confidence            3433   999999888643 3 46788999999998887   334445555554444333

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.61  E-value=0.00027  Score=62.76  Aligned_cols=83  Identities=11%  Similarity=0.072  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHH----HHHhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNV----KGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i----~~~~~~~g  260 (378)
                      .++++||+|++  |++|...++.+...|++|+++.+... .++..+.+. ..|....+..+-.+.+.+    .+.....|
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  99999999999889999999987643 233444333 344323332222222222    22222223


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        84 ~id~lv~nAg~   94 (275)
T 2pd4_A           84 SLDFIVHSVAF   94 (275)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            59999999984

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.61  E-value=0.00042  Score=62.42  Aligned_cols=92  Identities=14%  Similarity=0.163  Sum_probs=69.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -.|++|+|.|+ |.+|..+++.++.+|++|++..+    +.++.+.+.++|+.. ++.     ..+.+...   ..|+|+
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~----~~~~~~~~~~~g~~~-~~~-----~~l~~~l~---~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGAR----SSAHLARITEMGLVP-FHT-----DELKEHVK---DIDICI  220 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCEE-EEG-----GGHHHHST---TCSEEE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHCCCeE-Ech-----hhHHHHhh---CCCEEE
Confidence            46899999998 99999999999999999888774    555656566677642 221     12333333   399999


Q ss_pred             eCCCCccH-HHHHHhcccCCEEEEEec
Q 017064          267 NCVGGNSA-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       267 d~~g~~~~-~~~~~~l~~~G~~v~~g~  292 (378)
                      .++....+ ...+..+++++.++.++.
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeC
Confidence            99997554 567889999999999883

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.61  E-value=0.00065  Score=60.53  Aligned_cols=107  Identities=20%  Similarity=0.247  Sum_probs=65.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH-HHHHHHhCCCcEE-EccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-AKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~-~~~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .|+++||+|++|++|...++.+...|++|+++.+......+ ..+.+++.|.... +..+-.+.+.+    .+.....|+
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999998899999998864210011 1233345564432 22222222221    111111234


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|...                          .+.++..++.+|++|.++...
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  166 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  166 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechh
Confidence            999999998421                          023455566789999998543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.59  E-value=0.0003  Score=56.68  Aligned_cols=99  Identities=14%  Similarity=0.133  Sum_probs=62.9

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      ....++++|+|.|+ |.+|...++.++..|.+|+++.+    ++++.+.++ ..|...+ ..+..+.+.+.+. +- .++
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~----~~~~~~~~~~~~g~~~~-~~d~~~~~~l~~~-~~-~~a   85 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDK----NEYAFHRLNSEFSGFTV-VGDAAEFETLKEC-GM-EKA   85 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES----CGGGGGGSCTTCCSEEE-ESCTTSHHHHHTT-TG-GGC
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEEC----CHHHHHHHHhcCCCcEE-EecCCCHHHHHHc-Cc-ccC
Confidence            44567899999998 99999999999999999888874    455555555 5676543 3332233334332 11 139


Q ss_pred             cEEEeCCCCccH-HHHHHhccc-C--CEEEEE
Q 017064          263 ALGFNCVGGNSA-SKVLKFLSQ-G--GTMVTY  290 (378)
Q Consensus       263 Dvvid~~g~~~~-~~~~~~l~~-~--G~~v~~  290 (378)
                      |+||.|++.+.. ..+...++. +  .+++..
T Consensus        86 d~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~  117 (155)
T 2g1u_A           86 DMVFAFTNDDSTNFFISMNARYMFNVENVIAR  117 (155)
T ss_dssp             SEEEECSSCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            999999998654 333344443 3  354443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.59  E-value=0.00074  Score=59.61  Aligned_cols=80  Identities=18%  Similarity=0.160  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEE-ccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF-TESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi-~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+ ..+++|....+ ..+-.+.+.+.+    .....|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT----REDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999998875    444433 34456654332 222222222221    1111234


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       102 iD~lvnnAg~  111 (266)
T 3grp_A          102 IDILVNNAGI  111 (266)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.58  E-value=0.00075  Score=60.43  Aligned_cols=106  Identities=17%  Similarity=0.259  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH-HHHHHHhCCCcEEE-ccCcccHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-AKEKLKGLGADEVF-TESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~-~~~~~~~~ga~~vi-~~~~~~~~~----i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+......+ ..+.++..|....+ ..+-.+.+.    +.+.....|+
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999998999999998864211111 12233455654432 222222222    1122222235


Q ss_pred             CcEEEeCCCCc----c-----------------------HHHHHHhcccCCEEEEEecC
Q 017064          262 PALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +|++|+++|..    .                       .+.++..++++|++|.++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            99999998741    0                       02345566778999998743

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.57  E-value=0.00034  Score=61.69  Aligned_cols=84  Identities=13%  Similarity=0.104  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+.. .|++|+++.+.....++..+.++..+.. .++..+-.+.+.+.+    .....++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999988877 8999999986321111112223333432 233222222222222    1111124


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (276)
T 1wma_A           83 LDVLVNNAGI   92 (276)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999984

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.57  E-value=0.00028  Score=61.96  Aligned_cols=103  Identities=13%  Similarity=0.207  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-EccCcccHHHHH----HHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLEVKNVK----GLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v-i~~~~~~~~~i~----~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+ ++++.... +..+-.+.+.+.    ......|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR----NESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999899999999885    44444433 34443332 222222222211    11112235


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|...                          .+.++..++++|++|.++...
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  141 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVA  141 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChh
Confidence            999999998421                          022345566789999998543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.57  E-value=0.0016  Score=57.57  Aligned_cols=103  Identities=16%  Similarity=0.246  Sum_probs=65.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~----i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.   ..++.    +.++..|.... +..+-.+.+.    +.+....
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN---AAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999988899999988653   23332    23344555433 2222222222    2222222


Q ss_pred             CCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecC
Q 017064          259 LPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .|++|++|+++|...                          .+.+...++++|++|.++..
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            235999999998410                          13345667789999999753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.56  E-value=0.00025  Score=61.78  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.+.++.-...+..+-.+.+.+.+.....+++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~   80 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDI----NESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFN   80 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999889999999885    444443333333222332332333344444333335999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        81 ~Ag~   84 (246)
T 2ag5_A           81 VAGF   84 (246)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.55  E-value=0.00053  Score=59.75  Aligned_cols=82  Identities=16%  Similarity=0.161  Sum_probs=56.7

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE-ccCcccHHHHHHHhcCCCCCc
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF-TESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi-~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      -.++++|||+|++|++|...++.+...|++|+++.+    +.++.+.+ .++.....+ ..+-.+.+.+.+.....+++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGS----NEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            356899999999999999999988889999999885    44444433 344433332 223334455555554444699


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999984

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.55  E-value=0.00045  Score=60.70  Aligned_cols=105  Identities=13%  Similarity=0.117  Sum_probs=66.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+. .+..+.+.+.|.. ..+  |-.+. .+++ +.+.....|++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-GAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-HHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999998888899999998876533 3334444444433 222  22222 2222 22222233459


Q ss_pred             cEEEeCCCCcc----------H---------------HHHHHhcc-cCCEEEEEecC
Q 017064          263 ALGFNCVGGNS----------A---------------SKVLKFLS-QGGTMVTYGGM  293 (378)
Q Consensus       263 Dvvid~~g~~~----------~---------------~~~~~~l~-~~G~~v~~g~~  293 (378)
                      |++++++|...          +               +.++..|+ .+|++|.++..
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            99999998420          1               23444553 57999999854

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.55  E-value=0.00081  Score=57.91  Aligned_cols=79  Identities=13%  Similarity=0.123  Sum_probs=50.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCcccHHHHHH----HhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKG----LLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~i~~----~~~~~g~~D  263 (378)
                      ++++||+|++|++|...++.+...|++|+++.+    +.++.+. ..+++....+..+-.+.+.+.+    .....+++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMAR----DEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999998889999999885    3444433 3344433333333222222221    111112499


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        81 ~li~~Ag~   88 (234)
T 2ehd_A           81 ALVNNAGV   88 (234)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.54  E-value=0.00059  Score=61.39  Aligned_cols=82  Identities=21%  Similarity=0.188  Sum_probs=50.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-c-EEE--ccCcc--cH----HHHHHHh
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVF--TESQL--EV----KNVKGLL  256 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~-~vi--~~~~~--~~----~~i~~~~  256 (378)
                      ..++++||+|+++++|...++.+...|++|++++|......+..+.+++.+. . ..+  |-.+.  .+    +.+.+..
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            3578999999999999999998888999999999642111122233333332 2 222  22222  12    2233323


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      +   ++|++|+++|.
T Consensus        90 g---~iD~lv~nAg~  101 (311)
T 3o26_A           90 G---KLDILVNNAGV  101 (311)
T ss_dssp             S---SCCEEEECCCC
T ss_pred             C---CCCEEEECCcc
Confidence            3   49999999994

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.54  E-value=0.00041  Score=61.59  Aligned_cols=84  Identities=11%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-E--ccCcc-cHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i--~~~~~-~~~~i~~~~~~~g~~D  263 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.....++..+.++..|.... +  |-.+. .++.+.+.....|++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999989999999998765444444455555554433 2  22221 2222211111113599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999994

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.54  E-value=0.00098  Score=58.72  Aligned_cols=104  Identities=21%  Similarity=0.298  Sum_probs=64.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcE-EEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADE-VFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+. .++++... .+..+-.+.+.+    .+.....|.
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDR----EERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999889999999885    4444443 34554322 222222222221    122112235


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCCC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      +|++|+++|...                          .+.++..++.+|++|.++....
T Consensus        81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            999999998421                          0123344434799999986544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.54  E-value=0.00076  Score=58.70  Aligned_cols=81  Identities=16%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~~----~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.   ++++.+    .++..|.... +..+-.+.+.+.+    ....
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG---NEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998899999998862   333322    2333454332 2222222222221    1111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 2uvd_A           80 FGQVDILVNNAGV   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2249999999984

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.53  E-value=0.00097  Score=59.00  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i----~~~~~~  258 (378)
                      .++++||+|++|++|...+..+...|++|+++.+.    +++.+    .++..|... .+..+-.+.+.+    .+....
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC----HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998899999998863    33332    233345432 222222222222    222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus       106 ~g~iD~li~~Ag~  118 (272)
T 1yb1_A          106 IGDVSILVNNAGV  118 (272)
T ss_dssp             TCCCSEEEECCCC
T ss_pred             CCCCcEEEECCCc
Confidence            2359999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.53  E-value=0.00042  Score=65.85  Aligned_cols=100  Identities=15%  Similarity=0.108  Sum_probs=71.8

Q ss_pred             HHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+..+. -.|++++|.|+ |++|...++.++..|++|+++.    .++.+...+...|++. .+.     ++   
T Consensus       251 l~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D----~~~~~a~~Aa~~g~dv-~~l-----ee---  316 (488)
T 3ond_A          251 LPDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTE----IDPICALQATMEGLQV-LTL-----ED---  316 (488)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEE-CCG-----GG---
T ss_pred             HHHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHhCCcc-CCH-----HH---
Confidence            34444443443 57899999999 7999999999999999988775    3566666666667532 111     11   


Q ss_pred             HhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~  292 (378)
                      ...   .+|+++++.|... + ...+..+++++.++.+|.
T Consensus       317 ~~~---~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~  353 (488)
T 3ond_A          317 VVS---EADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGH  353 (488)
T ss_dssp             TTT---TCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSS
T ss_pred             HHH---hcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCC
Confidence            111   3999999999744 3 568899999999998884

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.52  E-value=0.00066  Score=59.81  Aligned_cols=83  Identities=19%  Similarity=0.174  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~---~~~-i~~~~~~~g  260 (378)
                      .++++||+|++  |++|...++.+...|++|+++.+.. ..++..+.+ ...+....+..+-.+   ++. +.+.....|
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  8999999998888999999988753 223333333 334433333333222   222 223333444


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        87 ~iD~lv~~Ag~   97 (265)
T 1qsg_A           87 KFDGFVHSIGF   97 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.52  E-value=0.0003  Score=61.19  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..  .++..+.+++.|.+... ..+-.+.+.++.... .|++|+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~--~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-~g~iDiLV   84 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA--PDETLDIIAKDGGNASALLIDFADPLAAKDSFT-DAGFDILV   84 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-TTCCCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-hCCCCEEE
Confidence            489999999999999999999999999999887652  35566677777765443 222222223333322 24599999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        85 NNAGi   89 (247)
T 4hp8_A           85 NNAGI   89 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.51  E-value=0.00059  Score=60.01  Aligned_cols=83  Identities=16%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHH----HhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKG----LLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~----~~~~~g  260 (378)
                      .++++||+|++  |++|...++.+...|++|+++.+... .++..+.+. ..+....+..+-.+.+.+.+    .....|
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  89999999888888999999886532 222333333 34433344333222222221    111123


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            49999999984

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.51  E-value=0.0012  Score=57.79  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHHHH----hcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKGL----LANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+...  ++..+.++..|.... +..+-.+.+.+.+.    ....|++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998889999998886532  333444455554432 22222222222221    1112249


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        81 d~lv~~Ag~   89 (255)
T 2q2v_A           81 DILVNNAGI   89 (255)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.51  E-value=0.00032  Score=61.43  Aligned_cols=83  Identities=14%  Similarity=0.107  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..+..++..+.++..|.... +..+-.+.+.+.    ..... |++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence            578999999999999999999989999999998754333344444555554432 222222222221    11112 359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999994

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.51  E-value=0.00042  Score=62.02  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-EccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v-i~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .|+++||+|++|++|...++.+...|++|+++.+    +.++.+.+ .+++.... +..+-.+.+.+.++....+++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVR----DTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999899999999985    45554444 44554322 222333445566555544459999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            999984

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.49  E-value=0.00038  Score=61.43  Aligned_cols=34  Identities=15%  Similarity=0.216  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .++++||+|++|++|...++.+...|++|+++.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   39 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW   39 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence            5689999999999999999999889999999885

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.48  E-value=0.00045  Score=60.71  Aligned_cols=106  Identities=18%  Similarity=0.238  Sum_probs=63.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.... .++..+.+++.|... .+..+-.+.+.+    .+.....|+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999888899999988654211 111223334455432 232222222222    112122235


Q ss_pred             CcEEEeCCCCc-c-----------H---------------HHHHHhcccCCEEEEEecC
Q 017064          262 PALGFNCVGGN-S-----------A---------------SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~-~-----------~---------------~~~~~~l~~~G~~v~~g~~  293 (378)
                      +|++|+++|.. .           +               +.++..+.++|++|.++..
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            99999999742 0           0               2234456668999999753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.48  E-value=0.00046  Score=60.42  Aligned_cols=93  Identities=17%  Similarity=0.174  Sum_probs=60.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC-CCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL-PEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~-g~~Dvvid~  268 (378)
                      +++||+|++|++|...++.+...|++|+++.+.....+          ..  +..+-.+.+.+.+..... +++|++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~--~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------AD--LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------CC--TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----------cc--cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            47999999999999999998889999999886532111          01  111112234455554444 468999999


Q ss_pred             CCCcc-------------------HHHHHHhccc--CCEEEEEecCC
Q 017064          269 VGGNS-------------------ASKVLKFLSQ--GGTMVTYGGMS  294 (378)
Q Consensus       269 ~g~~~-------------------~~~~~~~l~~--~G~~v~~g~~~  294 (378)
                      +|...                   .+.++..+..  .|++|.++...
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            98543                   1234444433  38999998543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.47  E-value=0.00066  Score=60.00  Aligned_cols=103  Identities=14%  Similarity=0.180  Sum_probs=63.6

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcEE-EccCcccH-------HHHHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADEV-FTESQLEV-------KNVKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-~~~~~~~~~ga~~v-i~~~~~~~-------~~i~~~~~  257 (378)
                      ..++++||+|+++++|...++.+...|++|+++.+...... +..+.++..|.... +..+-.+.       +++.+.. 
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            35789999999999999999888888999998754321111 11223344554433 22222222       2232323 


Q ss_pred             CCCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEec
Q 017064          258 NLPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  292 (378)
                        |++|++|+++|...                          .+.++..++++|++|.++.
T Consensus       104 --g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          104 --GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             --SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             --CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence              34999999998420                          1234556677899999974

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.46  E-value=0.00045  Score=60.18  Aligned_cols=80  Identities=19%  Similarity=0.174  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCC---CcEEEccCcccHHHHHHH----hcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLG---ADEVFTESQLEVKNVKGL----LANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g---a~~vi~~~~~~~~~i~~~----~~~~  259 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+. .+++.   .-..+..+-.+.+.+.+.    ....
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999988889999999885    3333332 23322   222332222222222211    1111


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +.+|++|+++|.
T Consensus        81 ~~id~li~~Ag~   92 (251)
T 1zk4_A           81 GPVSTLVNNAGI   92 (251)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            249999999984

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.46  E-value=0.0004  Score=60.86  Aligned_cols=77  Identities=9%  Similarity=-0.103  Sum_probs=49.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----HHHHHHhcCCCCCcEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLLANLPEPALG  265 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----~~i~~~~~~~g~~Dvv  265 (378)
                      +++||+|+++++|...++.+...|++|+++.+.....++..+ ++..|.+...- +..++    +.+.+..+   ++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-d~~~v~~~~~~~~~~~g---~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-SEQEPAELIEAVTSAYG---QVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-CCCSHHHHHHHHHHHHS---CCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-CHHHHHHHHHHHHHHhC---CCCEE
Confidence            479999999999999999999999999998865322222222 33334332221 33232    23333333   49999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.45  E-value=0.00052  Score=60.29  Aligned_cols=79  Identities=16%  Similarity=0.137  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC-----CCc-EEEccCcccHHH----HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-----GAD-EVFTESQLEVKN----VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~-----ga~-~vi~~~~~~~~~----i~~~~  256 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.+ +++     +.. ..+..+-.+.+.    +.+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSR----NREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999988889999999885    33333222 221     312 223222222222    33333


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...| +|++|+++|.
T Consensus        82 ~~~g-id~lv~~Ag~   95 (260)
T 2z1n_A           82 DLGG-ADILVYSTGG   95 (260)
T ss_dssp             HTTC-CSEEEECCCC
T ss_pred             HhcC-CCEEEECCCC
Confidence            4446 9999999984

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.44  E-value=0.00068  Score=59.84  Aligned_cols=81  Identities=22%  Similarity=0.252  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHHHH----hcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~  258 (378)
                      .+++|||+|++|++|...++.+...|++|+++.+.   +.++.    +.++..|.... +..+-.+.+.+.+.    ...
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999888899999998862   33332    23334454432 22222222222221    111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        97 ~~~~d~vi~~Ag~  109 (274)
T 1ja9_A           97 FGGLDFVMSNSGM  109 (274)
T ss_dssp             HSCEEEEECCCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1249999999984

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.44  E-value=0.0012  Score=58.05  Aligned_cols=80  Identities=13%  Similarity=0.061  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCc-EEEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGAD-EVFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~-~vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+. ..+++.. ..+..+-.+.+.+.+    .....|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI----LDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999988889999999885    3444333 3344322 222222222222221    1112224


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        82 iD~lv~~Ag~   91 (260)
T 1nff_A           82 LHVLVNNAGI   91 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.44  E-value=0.00063  Score=59.24  Aligned_cols=79  Identities=14%  Similarity=0.163  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHH----HHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNV----KGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i----~~~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+ ...++|+. .+..+-.+.+.+    .......|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDI----EEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999889999999885    444444 33455633 332222222221    1121122359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        79 d~lvn~Ag~   87 (245)
T 1uls_A           79 DGVVHYAGI   87 (245)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.43  E-value=0.00094  Score=59.30  Aligned_cols=84  Identities=14%  Similarity=0.191  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..+..++..+.+++.|.. ..+..+-.+.+.+.    +.....|++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988889999999987543333334444555533 22322222222222    121122359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.43  E-value=0.0011  Score=58.91  Aligned_cols=105  Identities=13%  Similarity=0.125  Sum_probs=64.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--------cHHHHH----HHHhCCCcEEE-ccCcccHHHH--
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--------SDEAKE----KLKGLGADEVF-TESQLEVKNV--  252 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--------~~~~~~----~~~~~ga~~vi-~~~~~~~~~i--  252 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+....        ..++.+    .++..|....+ ..+-.+.+.+  
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999988754110        122222    23344544332 2222222222  


Q ss_pred             --HHHhcCCCCCcEEEeCCCCcc---------H---------------HHHHHhcccCCEEEEEec
Q 017064          253 --KGLLANLPEPALGFNCVGGNS---------A---------------SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       253 --~~~~~~~g~~Dvvid~~g~~~---------~---------------~~~~~~l~~~G~~v~~g~  292 (378)
                        .+.....|++|++|+++|...         +               +.++..+..+|++|.++.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence              222222235999999998521         1               223455667899999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.43  E-value=0.0016  Score=56.55  Aligned_cols=84  Identities=17%  Similarity=0.200  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcEE-EccCcccHHHHHHH----hcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADEV-FTESQLEVKNVKGL----LANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+..... ++..+.++..+.... +..+-.+.+.+.+.    ....++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999988999999884321111 222233344454332 22222222222221    111124


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.43  E-value=0.00054  Score=59.71  Aligned_cols=78  Identities=13%  Similarity=0.080  Sum_probs=52.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHH-HHHHhcCCCCCcE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKN-VKGLLANLPEPAL  264 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~~Dv  264 (378)
                      ++|||+|+++++|.+.++.+...|++|+++.+    ++++.+.+.+.+.... +..+-.+   ++. +.+.....|++|+
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI----DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            78999999999999999999999999998874    5566555554443332 3222222   222 2222223345999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +++++|.
T Consensus        79 LVNNAG~   85 (247)
T 3ged_A           79 LVNNACR   85 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.42  E-value=0.00069  Score=60.41  Aligned_cols=80  Identities=16%  Similarity=0.251  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~~----~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+    .++..+.... +..+-.+.+.+.+    ....
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR----TQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES----SHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            3689999999999999999988888999998764    333332    2333454432 2222222222222    2222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus       119 ~~~id~li~~Ag~  131 (285)
T 2c07_A          119 HKNVDILVNNAGI  131 (285)
T ss_dssp             CSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.42  E-value=0.00065  Score=59.46  Aligned_cols=86  Identities=17%  Similarity=0.085  Sum_probs=52.8

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec-CCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANL  259 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~  259 (378)
                      ..++++|||+|+++++|...++.+...|++|+++.+ ......+..+.++..+.+. .+..+-.+.+.    +.+.....
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            356789999999999999999888889999998873 3222333344445555442 22222222222    22222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        90 g~id~lv~~Ag~  101 (256)
T 3ezl_A           90 GEIDVLVNNAGI  101 (256)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.42  E-value=0.0012  Score=59.27  Aligned_cols=105  Identities=11%  Similarity=0.135  Sum_probs=65.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEEEc-cCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVFT-ESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi~-~~~~~~~~i~----~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..  .+++.    +.++..|....+. .+-.+.+.+.    +....
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA--EEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG--GHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--chhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999989999998887531  12222    2334456544332 2222222221    12122


Q ss_pred             CCCCcEEEeCCCCcc----H-----------------------HHHHHhcccCCEEEEEecCC
Q 017064          259 LPEPALGFNCVGGNS----A-----------------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~----~-----------------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      .|++|++|+++|...    +                       +.++..++++|++|.++...
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~  188 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ  188 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGG
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChh
Confidence            235999999998411    0                       22345667789999998543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.41  E-value=0.00035  Score=61.66  Aligned_cols=85  Identities=12%  Similarity=0.096  Sum_probs=54.8

Q ss_pred             cCCCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHH----HHHhcC
Q 017064          186 LNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       186 ~~~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i----~~~~~~  258 (378)
                      ...+++|||+|++  +++|...++.+...|++|+++.+.. ...++.+ ...+.+....+..+-.+.+.+    .+....
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            4568999999998  9999999998888999999988653 2333333 334555433443332222222    222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        90 ~g~id~lv~nAg~  102 (271)
T 3ek2_A           90 WDSLDGLVHSIGF  102 (271)
T ss_dssp             CSCEEEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            2359999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.41  E-value=0.00044  Score=59.99  Aligned_cols=103  Identities=16%  Similarity=0.207  Sum_probs=67.6

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHHhcCCCCCcE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      +-.|+++||+|+++++|.+.++.+...|++|+++.+..    ++.+.  ..+... .+..+-.+.+.+.+.....|++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~----~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA----DGVHA--PRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST----TSTTS--CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHhh--hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            34699999999999999999999999999999988642    22211  112221 122222233445555555567999


Q ss_pred             EEeCCCCcc---------H---------------HHHHHhcc-cCCEEEEEecCC
Q 017064          265 GFNCVGGNS---------A---------------SKVLKFLS-QGGTMVTYGGMS  294 (378)
Q Consensus       265 vid~~g~~~---------~---------------~~~~~~l~-~~G~~v~~g~~~  294 (378)
                      +++++|...         +               +.++.+|+ .+|++|.++...
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            999998420         0               33455554 589999998554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.41  E-value=0.0022  Score=53.00  Aligned_cols=96  Identities=15%  Similarity=0.141  Sum_probs=65.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +++|+|.|+ |.+|...++.++.. |.+|+++.    .++++.+.+++.|...+. .+..+.+.+.+.++- .++|+||.
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid----~~~~~~~~~~~~g~~~~~-gd~~~~~~l~~~~~~-~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIE----IREEAAQQHRSEGRNVIS-GDATDPDFWERILDT-GHVKLVLL  111 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEE----SCHHHHHHHHHTTCCEEE-CCTTCHHHHHTBCSC-CCCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEE----CCHHHHHHHHHCCCCEEE-cCCCCHHHHHhccCC-CCCCEEEE
Confidence            678999998 99999999999998 99999887    467888888888877554 222222333333122 24999999


Q ss_pred             CCCCccH-HH---HHHhcccCCEEEEEe
Q 017064          268 CVGGNSA-SK---VLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~-~~---~~~~l~~~G~~v~~g  291 (378)
                      +++++.. ..   ..+.+.+..+++...
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~  139 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAIA  139 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence            9997543 22   334444555766543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.41  E-value=0.0012  Score=58.75  Aligned_cols=80  Identities=13%  Similarity=0.160  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+ ...+++.. ..+..+-.+.+.+    .+.....|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI----DGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988888999999885    344433 33444433 2232222222221    122122235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       104 iD~lvnnAg~  113 (277)
T 3gvc_A          104 VDKLVANAGV  113 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.40  E-value=0.00085  Score=59.45  Aligned_cols=78  Identities=17%  Similarity=0.082  Sum_probs=50.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC---CcEEEccCcccHHHHHHHhc----CCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG---ADEVFTESQLEVKNVKGLLA----NLPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g---a~~vi~~~~~~~~~i~~~~~----~~g~  261 (378)
                      +++||+|++|++|...++.+...|++|+++.+    ++++.+.+ .++.   .-..+..+-.+.+.+.+...    ..|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGR----REERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            78999999999999999999889999999885    34444332 2332   12223233223333333322    2245


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        98 iD~lvnnAG~  107 (272)
T 2nwq_A           98 LRGLINNAGL  107 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999984

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.39  E-value=0.002  Score=56.98  Aligned_cols=80  Identities=18%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCc-EEEccCcccHHHHH----HHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLEVKNVK----GLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~-~vi~~~~~~~~~i~----~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    +.++.+ ...+++.. ..+..+-.+.+.+.    +.....|+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR----RLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999998889999999885    344433 33444422 22322222222221    11122235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       103 iD~lVnnAg~  112 (272)
T 4dyv_A          103 VDVLFNNAGT  112 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.39  E-value=0.0026  Score=55.35  Aligned_cols=82  Identities=15%  Similarity=0.137  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHHHH----hcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKGL----LANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+..  .+...+.+++.|.... +..+-.+.+.+.+.    ....|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc--hhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999988999999988642  1222224455564332 22222222222221    1112249


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.37  E-value=0.00079  Score=59.28  Aligned_cols=105  Identities=13%  Similarity=0.184  Sum_probs=63.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEE-ccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF-TESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~vi-~~~~~~~~~i~~----~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.. .+.++.+    .++..|....+ ..+-.+.+.+.+    ....
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999989999999886532 1233332    22334544322 222222222221    1112


Q ss_pred             CCCCcEEEeCCCCc---c--------H---------------HHHHHhcccCCEEEEEecC
Q 017064          259 LPEPALGFNCVGGN---S--------A---------------SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       259 ~g~~Dvvid~~g~~---~--------~---------------~~~~~~l~~~G~~v~~g~~  293 (378)
                      .|++|++|+++|..   .        +               +.++..++++|++|.++..
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            23599999999831   0        0               2234456678999998743

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.37  E-value=0.00039  Score=61.94  Aligned_cols=84  Identities=18%  Similarity=0.160  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cE-EEccCcccHHH----HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DE-VFTESQLEVKN----VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~-vi~~~~~~~~~----i~~~~~~~  259 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..+..++..+.+++.+.   .. .+..+-.+.+.    +.+.....
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999998888999999988532111122233344443   22 22222222222    11222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            359999999985

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.37  E-value=0.0014  Score=55.54  Aligned_cols=92  Identities=17%  Similarity=0.269  Sum_probs=61.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+||+|.+|...++.+...|.+|++++|.    +++.+.+. .+... +..+-.+.+.  +...   ++|+||+++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~----~~~~~~~~-~~~~~-~~~D~~d~~~--~~~~---~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN----AGKITQTH-KDINI-LQKDIFDLTL--SDLS---DQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----SHHHHHHC-SSSEE-EECCGGGCCH--HHHT---TCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC----chhhhhcc-CCCeE-EeccccChhh--hhhc---CCCEEEECCc
Confidence            59999999999999999999999999999963    44443332 33333 3222222222  3333   3999999998


Q ss_pred             Ccc---------HHHHHHhccc--CCEEEEEecC
Q 017064          271 GNS---------ASKVLKFLSQ--GGTMVTYGGM  293 (378)
Q Consensus       271 ~~~---------~~~~~~~l~~--~G~~v~~g~~  293 (378)
                      ...         ....++.++.  .++++.++..
T Consensus        71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            632         1455666655  4799988754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.37  E-value=0.0002  Score=61.41  Aligned_cols=88  Identities=19%  Similarity=0.163  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..    +             .|-.+  .+.+.+.....|++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~-------------~D~~~--~~~v~~~~~~~g~id~lv~   65 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT----G-------------LDISD--EKSVYHYFETIGAFDHLIV   65 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG----T-------------CCTTC--HHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc----c-------------cCCCC--HHHHHHHHHHhCCCCEEEE
Confidence            468899999999999999998888899999887532    1             12222  1222222222235999999


Q ss_pred             CCCCc-c--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          268 CVGGN-S--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       268 ~~g~~-~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|.. .                          .+.+...++++|+++.++...
T Consensus        66 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~  119 (223)
T 3uce_A           66 TAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML  119 (223)
T ss_dssp             CCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             CCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence            99842 0                          022345566789999998543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.36  E-value=0.00049  Score=58.66  Aligned_cols=95  Identities=13%  Similarity=0.074  Sum_probs=63.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|||+||+|.+|...++.+...|.+|++++|..    ++.+   .+.--.++..+-.+ .+.+.+...+   +|+||+++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~----~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~---~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV----EQVP---QYNNVKAVHFDVDWTPEEMAKQLHG---MDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG----GGSC---CCTTEEEEECCTTSCHHHHHTTTTT---CSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc----cchh---hcCCceEEEecccCCHHHHHHHHcC---CCEEEECC
Confidence            699999999999999999999999999999742    2211   11222333344344 5667766653   99999999


Q ss_pred             CCcc----------HHHHHHhcccC--CEEEEEecCCC
Q 017064          270 GGNS----------ASKVLKFLSQG--GTMVTYGGMSK  295 (378)
Q Consensus       270 g~~~----------~~~~~~~l~~~--G~~v~~g~~~~  295 (378)
                      |...          ....++.++..  +++|+++....
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            8532          13344444433  58999986543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.36  E-value=0.00056  Score=61.35  Aligned_cols=84  Identities=15%  Similarity=0.149  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-c-EEEccCcccHHH----HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVFTESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~-~vi~~~~~~~~~----i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.....++..+.+++.+. . ..+..+-.+.+.    +.+.....|+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999989999999998754333333344444442 2 223222222222    1222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.36  E-value=0.00035  Score=61.14  Aligned_cols=35  Identities=20%  Similarity=0.228  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   40 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS   40 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999999999999888889999998863

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.35  E-value=0.00081  Score=59.06  Aligned_cols=80  Identities=13%  Similarity=0.099  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHHHH----hcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~~~----~~~  258 (378)
                      .|+++||+|++|++|...++.+...|++|+++.+.    +++.+    .++..|.... +..+-.+.+.+.+.    ...
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999888899999998853    33332    2233354322 22222222222222    111


Q ss_pred             C-CCCcEEEeCCCC
Q 017064          259 L-PEPALGFNCVGG  271 (378)
Q Consensus       259 ~-g~~Dvvid~~g~  271 (378)
                      . +++|++|+++|.
T Consensus        84 ~~g~id~lv~~Ag~   97 (260)
T 2ae2_A           84 FHGKLNILVNNAGI   97 (260)
T ss_dssp             TTTCCCEEEECCCC
T ss_pred             cCCCCCEEEECCCC
Confidence            1 259999999983

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.35  E-value=0.00053  Score=60.34  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcc-cHHH-HHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQL-EVKN-VKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~-~~~~-i~~~~~~~g~~Dv  264 (378)
                      .++++||+|+++++|...++.+...|++|+++.+..   ++..+.+++.++..+. |-.+. .++. +.+.....|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC---CHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            468999999999999999998888899999998753   2233444555643321 22221 1222 2222222345999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.34  E-value=0.0031  Score=49.67  Aligned_cols=95  Identities=9%  Similarity=0.008  Sum_probs=68.1

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .++|+|.|+ |.+|...++.++..|.+|+++.    .++++.+.+++.|...+. .+..+.+.+.+..-.  ++|++|.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid----~~~~~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~--~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIE----TSRTRVDELRERGVRAVL-GNAANEEIMQLAHLE--CAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHTTCEEEE-SCTTSHHHHHHTTGG--GCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEE----CCHHHHHHHHHcCCCEEE-CCCCCHHHHHhcCcc--cCCEEEEE
Confidence            468999999 9999999999999999999998    478888888888876543 333333334333111  49999999


Q ss_pred             CCCccHH----HHHHhcccCCEEEEEe
Q 017064          269 VGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                      ++.+...    ...+.+.+..+++...
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence            9986532    3345566677766543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.34  E-value=0.00028  Score=64.14  Aligned_cols=80  Identities=13%  Similarity=0.121  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCC--c-EEEccCcccHHH----HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGA--D-EVFTESQLEVKN----VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga--~-~vi~~~~~~~~~----i~~~~  256 (378)
                      .+++|||+|++|++|...++.+...|++|+++.+.    .++.+    .++..+.  . .++..+-.+.+.    +....
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR----QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999888899999999864    33332    2233332  2 223222222222    22222


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...|.+|++|+++|.
T Consensus        83 ~~~g~id~lv~nAg~   97 (319)
T 3ioy_A           83 ARFGPVSILCNNAGV   97 (319)
T ss_dssp             HHTCCEEEEEECCCC
T ss_pred             HhCCCCCEEEECCCc
Confidence            222359999999993

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.33  E-value=0.0015  Score=56.99  Aligned_cols=80  Identities=15%  Similarity=0.132  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEE-EccCcccHHHHH----HHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQLEVKNVK----GLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~v-i~~~~~~~~~i~----~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+. ..+++.... +..+-.+.+.+.    ......|.
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI----NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999998889999998875    3444333 334444322 222222222221    11111235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        81 id~lv~~Ag~   90 (253)
T 1hxh_A           81 LNVLVNNAGI   90 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.33  E-value=0.00047  Score=60.61  Aligned_cols=81  Identities=14%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   ++++.    +.+++.|.... +..+-.+.+.+.    +....
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR---SKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999987432   33332    23344554433 222222222221    11112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        80 ~g~id~lv~nAg~   92 (258)
T 3oid_A           80 FGRLDVFVNNAAS   92 (258)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.33  E-value=0.00077  Score=58.25  Aligned_cols=35  Identities=20%  Similarity=0.406  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~   36 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   36 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            35789999999999999999999999999998865

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.32  E-value=0.00097  Score=57.97  Aligned_cols=84  Identities=13%  Similarity=0.159  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.....++..+.+++.|.... +..+-.+   +++ +.+.....+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999988888999999998642111112223344454432 2222222   222 22233333459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.31  E-value=0.00078  Score=59.28  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCC-Cc-EEEccCcccHHHH----HHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLG-AD-EVFTESQLEVKNV----KGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g-a~-~vi~~~~~~~~~i----~~~~~  257 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    .++.    +.++..+ .. ..+..+-.+.+.+    .+...
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS----TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999988999999998863    3333    2333444 22 2232222222221    11212


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        85 ~~g~id~lvnnAg~   98 (262)
T 3pk0_A           85 EFGGIDVVCANAGV   98 (262)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCCEEEECCCC
Confidence            22359999999984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.31  E-value=0.001  Score=58.94  Aligned_cols=80  Identities=14%  Similarity=0.138  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHHHH----hcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~~~----~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    +++.+    .+++.|.... +..+-.+.+.+.+.    ...
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998999999998863    33332    2233454322 22222222222221    111


Q ss_pred             C-CCCcEEEeCCCC
Q 017064          259 L-PEPALGFNCVGG  271 (378)
Q Consensus       259 ~-g~~Dvvid~~g~  271 (378)
                      . |++|++|+++|.
T Consensus        96 ~~g~id~lv~nAg~  109 (273)
T 1ae1_A           96 FDGKLNILVNNAGV  109 (273)
T ss_dssp             TTSCCCEEEECCCC
T ss_pred             cCCCCcEEEECCCC
Confidence            1 259999999984

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.00079  Score=59.38  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEE---ccCcc-cHHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF---TESQL-EVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.    .++.+    .++..|.....   |-.+. .++. +.+....
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999988999999998853    43332    33344544332   22221 1222 1112222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        79 ~g~iD~lVnnAG~   91 (264)
T 3tfo_A           79 WGRIDVLVNNAGV   91 (264)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.00034  Score=62.37  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=48.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhC-CCc-EEEccCcccH-------HHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGL-GAD-EVFTESQLEV-------KNVKG  254 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~-ga~-~vi~~~~~~~-------~~i~~  254 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    +++.+.    +.+. +.. ..+..+-.+.       +++.+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR----PDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999888899999998863    333322    2222 222 3332222222       22333


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      ..   |++|++|+++|.
T Consensus       108 ~~---g~iD~lvnnAG~  121 (281)
T 4dry_A          108 EF---ARLDLLVNNAGS  121 (281)
T ss_dssp             HH---SCCSEEEECCCC
T ss_pred             Hc---CCCCEEEECCCC
Confidence            33   359999999984

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.30  E-value=0.00061  Score=59.85  Aligned_cols=79  Identities=15%  Similarity=0.075  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCccc---HHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLE---VKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~---~~~-i~~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.    ++..|... .+..+-.+   ++. +......
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGR----HLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999889999999885    3333322    22234332 22222222   222 2222111


Q ss_pred             -CCCCcEEEeCCC
Q 017064          259 -LPEPALGFNCVG  270 (378)
Q Consensus       259 -~g~~Dvvid~~g  270 (378)
                       .|.+|++|+++|
T Consensus        80 ~~g~id~lvnnAg   92 (260)
T 2qq5_A           80 QQGRLDVLVNNAY   92 (260)
T ss_dssp             HTTCCCEEEECCC
T ss_pred             cCCCceEEEECCc
Confidence             235999999994

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.28  E-value=0.0031  Score=54.90  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=51.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-EEccCcccHHHHHHHh----cCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLEVKNVKGLL----ANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~-vi~~~~~~~~~i~~~~----~~~g~~D  263 (378)
                      +++||+|+++++|...++.+...|++|+++.+    +.++.+.+ .+++... .+..+-.+.+.+.+..    ...|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR----RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            36899999999999999998889999999885    44444333 3444332 2322322333333332    2334699


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        77 ~lvnnAg~   84 (248)
T 3asu_A           77 ILVNNAGL   84 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.28  E-value=0.00094  Score=60.11  Aligned_cols=81  Identities=21%  Similarity=0.176  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHHH----HHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNVK----GLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i~----~~~~  257 (378)
                      -.|+++||+|++|++|...++.+...|++|+++.+.    .++.+    .++..|.... +..+-.+.+.+.    +...
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD----QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998999999998863    33332    3334454432 222222222221    1111


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus       105 ~~g~id~lvnnAg~  118 (301)
T 3tjr_A          105 LLGGVDVVFSNAGI  118 (301)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             hCCCCCEEEECCCc
Confidence            12249999999984

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.28  E-value=0.0015  Score=58.27  Aligned_cols=80  Identities=18%  Similarity=0.146  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC---cEEEEecCCCCcHHHHHHHH-hC-----CCcEE-EccCcccHHHHHH---
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLK-GL-----GADEV-FTESQLEVKNVKG---  254 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~---~vi~~~~~~~~~~~~~~~~~-~~-----ga~~v-i~~~~~~~~~i~~---  254 (378)
                      .|+++||+|+++++|...++.+...|+   +|+++.+    +.++.+.+. ++     +.... +..+-.+.+.+.+   
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR----RLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES----CHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC----CHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            468999999999999998877776676   8888875    344433322 11     33322 2222222222222   


Q ss_pred             -HhcCCCCCcEEEeCCCC
Q 017064          255 -LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 -~~~~~g~~Dvvid~~g~  271 (378)
                       .....|++|++|+++|.
T Consensus       108 ~~~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGK  125 (287)
T ss_dssp             TSCGGGCSCCEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence             22233459999999984

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.27  E-value=0.0012  Score=57.47  Aligned_cols=80  Identities=20%  Similarity=0.188  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .++.+.    ++..|... .+..+-.+.+.+.    +....
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999988899999998853    333332    23335432 2222222222222    11111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        82 ~g~id~lv~nAg~   94 (247)
T 2jah_A           82 LGGLDILVNNAGI   94 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.27  E-value=0.00042  Score=59.96  Aligned_cols=98  Identities=10%  Similarity=0.142  Sum_probs=64.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      ..+|||+|++|++|...++.+...| ++|+++.|.    +++...+...++ .++..+-.+.+.+.+...+   +|+||.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~----~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQ----PAKIHKPYPTNS-QIIMGDVLNHAALKQAMQG---QDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESS----GGGSCSSCCTTE-EEEECCTTCHHHHHHHHTT---CSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcC----hhhhcccccCCc-EEEEecCCCHHHHHHHhcC---CCEEEE
Confidence            3589999999999999999999999 899998864    222211111122 2232333345566666654   999999


Q ss_pred             CCCCccH----HHHHHhccc--CCEEEEEecCC
Q 017064          268 CVGGNSA----SKVLKFLSQ--GGTMVTYGGMS  294 (378)
Q Consensus       268 ~~g~~~~----~~~~~~l~~--~G~~v~~g~~~  294 (378)
                      ++|....    +.++..++.  .+++|+++...
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            9987543    445555544  36899998543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.27  E-value=0.00067  Score=60.08  Aligned_cols=80  Identities=11%  Similarity=0.077  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEEE-ccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF-TESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi-~~~~~~~~~----i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.    +.+++.|....+ ..+-.+.+.    +.+....
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGT----DPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS----CHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999899999988875    33333    233445554332 222222222    2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus       101 ~g~iD~lv~nAg~  113 (271)
T 4ibo_A          101 GIDVDILVNNAGI  113 (271)
T ss_dssp             TCCCCEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3359999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.27  E-value=0.00089  Score=58.96  Aligned_cols=81  Identities=12%  Similarity=0.128  Sum_probs=52.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHH----HHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKN----VKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~----i~~~~~  257 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+.    .++.+    .+++.|.... +..+-.+.+.    +.+...
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAART----VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999988899999998863    33332    3334454433 2222222222    222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        85 ~~g~id~lv~nAg~   98 (264)
T 3ucx_A           85 AYGRVDVVINNAFR   98 (264)
T ss_dssp             HTSCCSEEEECCCS
T ss_pred             HcCCCcEEEECCCC
Confidence            23459999999975

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.26  E-value=0.0015  Score=56.89  Aligned_cols=77  Identities=14%  Similarity=0.138  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEE-ccCcccH-------HHHHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF-TESQLEV-------KNVKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi-~~~~~~~-------~~i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    +.++.+ ...+++..... ..+-.+.       +++.+..+ 
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   79 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDI----NAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG-   79 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC-
Confidence            4789999999999999999999999999998875    344433 33455554332 2221222       22333333 


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                        ++|++|+++|.
T Consensus        80 --~id~lv~nAg~   90 (247)
T 3rwb_A           80 --GIDILVNNASI   90 (247)
T ss_dssp             --CCSEEEECCCC
T ss_pred             --CCCEEEECCCC
Confidence              49999999984

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.26  E-value=0.00095  Score=59.34  Aligned_cols=85  Identities=18%  Similarity=0.203  Sum_probs=50.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcccHHH----HHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKN----VKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~----i~~~~~~~g~  261 (378)
                      ..++++||+|+++++|...++.+...|++|+++.+..+..++..+.++..|....+ ..+-.+.+.    +.+.....|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999888888999999886321111122233444544332 222222222    1222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.26  E-value=0.0007  Score=60.11  Aligned_cols=80  Identities=18%  Similarity=0.128  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHh---CCCcEEEccCcccHHHHH----HHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKG---LGADEVFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~---~ga~~vi~~~~~~~~~i~----~~~~~~  259 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+. ..+   .|.-..+..+-.+.+.+.    +.....
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR----DAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999889999998875    3333322 222   331122222222222222    222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus       104 g~iD~lvnnAg~  115 (276)
T 2b4q_A          104 ARLDILVNNAGT  115 (276)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999983

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.26  E-value=0.001  Score=58.33  Aligned_cols=84  Identities=14%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHH----HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKN----VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~----i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..+..++..+.+++.|.... +..+-.+.+.    +.+.....|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999988888899999988532111111223344454433 2222222222    11221222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.26  E-value=0.0018  Score=57.09  Aligned_cols=81  Identities=15%  Similarity=0.120  Sum_probs=50.4

Q ss_pred             CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCc-EEE--ccCcc-cH----HHHHHHh
Q 017064          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGAD-EVF--TESQL-EV----KNVKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~-~vi--~~~~~-~~----~~i~~~~  256 (378)
                      .++++||+|+  ++++|...++.+...|++|+++.+.   .++. .+...+++.. ..+  |-.+. .+    +++.+..
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD---RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC---hHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999998  8999999999988899999988863   2222 2333345432 122  22221 12    2222323


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      +..+++|++|+++|.
T Consensus        83 g~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGF   97 (269)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             CCCCCceEEEECCcc
Confidence            311149999999984

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.25  E-value=0.0016  Score=56.77  Aligned_cols=84  Identities=18%  Similarity=0.257  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC-CCCcHHHHHHHHhCCCcE-EEccCcccHHHHHH----HhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD-RAGSDEAKEKLKGLGADE-VFTESQLEVKNVKG----LLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~-~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~----~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+. ....++..+.++..+... .+..+-.+.+.+.+    .....++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999888899999999875 322222233344444332 22222222222222    1111224


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.25  E-value=0.00067  Score=59.69  Aligned_cols=80  Identities=14%  Similarity=0.112  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHHHHhc----C
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGLLA----N  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~~~~~----~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    +++.+    .++..+... .+..+-.+.+.+.+...    .
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998899999998853    33322    233345432 22222222222222211    1


Q ss_pred             C-CCCcEEEeCCCC
Q 017064          259 L-PEPALGFNCVGG  271 (378)
Q Consensus       259 ~-g~~Dvvid~~g~  271 (378)
                      . +++|++|+++|.
T Consensus        89 ~~~~id~li~~Ag~  102 (266)
T 1xq1_A           89 FGGKLDILINNLGA  102 (266)
T ss_dssp             HTTCCSEEEEECCC
T ss_pred             hCCCCcEEEECCCC
Confidence            0 249999999984

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.25  E-value=0.0011  Score=57.95  Aligned_cols=77  Identities=12%  Similarity=0.073  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHH-------HHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVK-------NVKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~-------~i~~~  255 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.    +++.+    .++..+.... +..+-.+.+       ++.+.
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN----AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999998853    33332    2233444322 222222222       23333


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .+   ++|++|+++|.
T Consensus        84 ~g---~id~li~~Ag~   96 (253)
T 3qiv_A           84 FG---GIDYLVNNAAI   96 (253)
T ss_dssp             HS---CCCEEEECCCC
T ss_pred             cC---CCCEEEECCCc
Confidence            32   49999999985

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.25  E-value=0.0011  Score=58.18  Aligned_cols=79  Identities=15%  Similarity=0.140  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH----HHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV----KGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i----~~~~~~~g~~D  263 (378)
                      .++++||+|++|++|...++.+...|++|+++.+..+    +.+...+++. ..+..+-.+.+.+    .+.....|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD   79 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE----GKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVD   79 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT----HHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999998889999999886532    2233333332 4443332222222    11111123599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        80 ~lv~~Ag~   87 (256)
T 2d1y_A           80 VLVNNAAI   87 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.25  E-value=0.001  Score=59.01  Aligned_cols=83  Identities=23%  Similarity=0.246  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~i~~~~~~~g~~D  263 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.+ ..++..+.+.+.+.... +..+-.+   ++.+.+.....|++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            478999999999999999998889999999887431 12222333344454332 2222222   222222221123599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.24  E-value=0.00057  Score=59.66  Aligned_cols=80  Identities=18%  Similarity=0.299  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+ ..++.. ..+  |-.+. .++. +.+.....|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTAT----SESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999885    34443332 333322 122  22221 1221 1112122235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        84 iD~lv~nAg~   93 (248)
T 3op4_A           84 VDILVNNAGI   93 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.24  E-value=0.0012  Score=58.51  Aligned_cols=80  Identities=20%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    +++.+    .+++.|... .+..+-.+.+.    +.+....
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998899999998863    33332    233345432 22222222222    2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        97 ~g~iD~lv~~Ag~  109 (277)
T 2rhc_B           97 YGPVDVLVNNAGR  109 (277)
T ss_dssp             TCSCSEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            3359999999984

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.24  E-value=0.0015  Score=56.62  Aligned_cols=36  Identities=17%  Similarity=0.168  Sum_probs=32.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..++++||+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   40 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            457899999999999999999998899999998865

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.23  E-value=0.00078  Score=59.09  Aligned_cols=80  Identities=11%  Similarity=0.152  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcEE-EccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-FTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~v-i~~~~~~~~~i----~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+    +..+.... +..+-.+.+.+    .+....
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGR----TKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999899999999885    44443333    23343322 22222222221    112112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        81 ~g~id~lv~nAg~   93 (257)
T 3imf_A           81 FGRIDILINNAAG   93 (257)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0021  Score=56.81  Aligned_cols=80  Identities=15%  Similarity=0.178  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHH----HhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKG----LLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~----~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.+ .++.....+..+-.+.+.+.+    .....|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK----DESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999899999998885    44444333 344332333233222222221    11112359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        84 D~lv~nAg~   92 (270)
T 1yde_A           84 DCVVNNAGH   92 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.22  E-value=0.0022  Score=58.77  Aligned_cols=99  Identities=18%  Similarity=0.198  Sum_probs=66.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      ..+|||+||+|.+|...++.+...|.+|++++|......++...+   ...++..+ ..+-.+.+.+.+.....+ +|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~Dl~d~~~l~~~~~~~~-~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV-YGLINEQEAMEKILKEHE-IDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHHHTT-CCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEE-EeecCCHHHHHHHHhhCC-CCEE
Confidence            358999999999999999999888999999998653444555433   34555443 333334556666655223 9999


Q ss_pred             EeCCCCccH---HHHHHhcccCC---EEEE
Q 017064          266 FNCVGGNSA---SKVLKFLSQGG---TMVT  289 (378)
Q Consensus       266 id~~g~~~~---~~~~~~l~~~G---~~v~  289 (378)
                      |.+++....   ...++.++..|   +++.
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            999996432   45555555444   6654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.22  E-value=0.001  Score=57.99  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE--EEccCcccHHHHHHHhcC---CCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE--VFTESQLEVKNVKGLLAN---LPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~--vi~~~~~~~~~i~~~~~~---~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+ ..++++...  .+..+-.+.+.+.+....   .++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDR----EAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAP   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence            4689999999999999999998889999999885    344433 233444332  232222222222222110   225


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        86 id~li~~Ag~   95 (254)
T 2wsb_A           86 VSILVNSAGI   95 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.22  E-value=0.0009  Score=58.99  Aligned_cols=77  Identities=18%  Similarity=0.162  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHh-CCCc--EEEccCccc---H----HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD--EVFTESQLE---V----KNVK  253 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~ga~--~vi~~~~~~---~----~~i~  253 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    +.++.+.    ++. .+..  ..+..+-.+   +    +.+.
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR----DGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999999999998889999999885    3333322    222 3332  222222222   2    2233


Q ss_pred             HHhcCCCCCcEEEeCCCC
Q 017064          254 GLLANLPEPALGFNCVGG  271 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~  271 (378)
                      +..   |++|++|+++|.
T Consensus        83 ~~~---g~id~lvnnAg~   97 (265)
T 3lf2_A           83 RTL---GCASILVNNAGQ   97 (265)
T ss_dssp             HHH---CSCSEEEECCCC
T ss_pred             HHc---CCCCEEEECCCC
Confidence            323   359999999984

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.21  E-value=0.0013  Score=57.59  Aligned_cols=80  Identities=13%  Similarity=0.067  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i----~~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .++.+    .++..|.... +..+-.+.+.+    .+....
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK----QENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999988899999998863    33322    2333454322 22222222221    111111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        89 ~g~iD~lv~~Ag~  101 (260)
T 2zat_A           89 HGGVDILVSNAAV  101 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2249999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.21  E-value=0.0027  Score=49.76  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=53.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +++|+|.|+ |.+|...++.++..|.+|+++.+    ++++.+.+++.|... +..+..+.+.+.+..-  +++|++|.+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~----~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~--~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI----NEEKVNAYASYATHA-VIANATEENELLSLGI--RNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEES----CHHHHHTTTTTCSEE-EECCTTCHHHHHTTTG--GGCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhCCEE-EEeCCCCHHHHHhcCC--CCCCEEEEC
Confidence            568999998 99999999999999999888773    566666666666543 3233223334444311  149999999


Q ss_pred             CCCc
Q 017064          269 VGGN  272 (378)
Q Consensus       269 ~g~~  272 (378)
                      ++.+
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9975

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.21  E-value=0.0024  Score=55.23  Aligned_cols=79  Identities=18%  Similarity=0.113  Sum_probs=48.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEE-ecCCCCcHHHHH----HHHhCCCc-EE-EccCcccHHHHHHH----hc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IRDRAGSDEAKE----KLKGLGAD-EV-FTESQLEVKNVKGL----LA  257 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~-~~~~~~~~~~~~----~~~~~ga~-~v-i~~~~~~~~~i~~~----~~  257 (378)
                      ++++||+|++|++|...++.+...|++|+++ .+    +.++.+    .++..|.. .. +..+-.+.+.+.+.    ..
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQ----NREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESS----CHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999998899999988 43    333332    22333433 22 32222222222221    11


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+++|++|+++|.
T Consensus        77 ~~~~~d~li~~Ag~   90 (245)
T 2ph3_A           77 VLGGLDTLVNNAGI   90 (245)
T ss_dssp             HHTCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence            11249999999984

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.20  E-value=0.00071  Score=59.11  Aligned_cols=96  Identities=19%  Similarity=0.240  Sum_probs=61.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-ccHHH-HHHHhcCCCCCcEEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVKN-VKGLLANLPEPALGF  266 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~~~~~-i~~~~~~~g~~Dvvi  266 (378)
                      ++++||+|++|++|...++.+...|++|+++.+......         .....++..+ ..++. +.......|++|++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            679999999999999999999899999999986532111         0111122222 22222 223333344699999


Q ss_pred             eCCCCc-------c--------------------HHHHHHhcccCCEEEEEecC
Q 017064          267 NCVGGN-------S--------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       267 d~~g~~-------~--------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +++|..       .                    .+.+...++++|++|.++..
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            999831       0                    02344566678999999854

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.20  E-value=0.0012  Score=58.92  Aligned_cols=77  Identities=13%  Similarity=0.142  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcEE-EccCcccH-------HHHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-FTESQLEV-------KNVKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~v-i~~~~~~~-------~~i~~~  255 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.    .++.+.    ++..|.... +..+-.+.       +++.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRT----RTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999988899999998853    333332    223343332 22222222       223333


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .   |++|++|+++|.
T Consensus       103 ~---g~iD~lVnnAg~  115 (283)
T 3v8b_A          103 F---GHLDIVVANAGI  115 (283)
T ss_dssp             H---SCCCEEEECCCC
T ss_pred             h---CCCCEEEECCCC
Confidence            3   359999999984

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.20  E-value=0.0019  Score=55.88  Aligned_cols=80  Identities=18%  Similarity=0.204  Sum_probs=48.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHH----HHhcCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~  259 (378)
                      |+++||+|++|++|...++.+...|++|+++.+.   +.++.+    .++..+... .+..+-.+.+.+.    +.....
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR---SAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999998999999986422   333332    223334332 2222222222222    222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        78 g~id~li~~Ag~   89 (244)
T 1edo_A           78 GTIDVVVNNAGI   89 (244)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.19  E-value=0.0011  Score=59.10  Aligned_cols=83  Identities=13%  Similarity=0.121  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHH----HHHhcCCC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNV----KGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i----~~~~~~~g  260 (378)
                      .|+++||+|++  |++|...++.+...|++|+++.+... ..+..+.+. ..|....+..+-.+.+.+    .......|
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999998  89999999988888999999886532 223333333 344323332222222222    22222223


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        99 ~iD~lv~~Ag~  109 (285)
T 2p91_A           99 SLDIIVHSIAY  109 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.19  E-value=0.0011  Score=58.53  Aligned_cols=77  Identities=17%  Similarity=0.162  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCc-EEE--ccCcc-cH----HHHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVF--TESQL-EV----KNVKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~-~vi--~~~~~-~~----~~i~~~  255 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.    +++.+    .++..|.. ..+  |-.+. .+    +++.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATT----EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999888899999998863    33332    23333432 222  22221 12    223333


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .   |++|++|+++|.
T Consensus       103 ~---g~iD~lvnnAg~  115 (270)
T 3ftp_A          103 F---GALNVLVNNAGI  115 (270)
T ss_dssp             H---SCCCEEEECCCC
T ss_pred             c---CCCCEEEECCCC
Confidence            3   359999999984

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.18  E-value=0.001  Score=57.85  Aligned_cols=78  Identities=13%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCC--cEEE--ccCcccHH-------H
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGA--DEVF--TESQLEVK-------N  251 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga--~~vi--~~~~~~~~-------~  251 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+.    +++.+    .+++.+.  ..++  +.+..+.+       .
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT----EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC----HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            357899999999999999999988999999998863    33332    3334432  2222  22212222       2


Q ss_pred             HHHHhcCCCCCcEEEeCCCC
Q 017064          252 VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~  271 (378)
                      +.+..+   ++|++|+++|.
T Consensus        88 ~~~~~g---~id~lv~nAg~  104 (247)
T 3i1j_A           88 VEHEFG---RLDGLLHNASI  104 (247)
T ss_dssp             HHHHHS---CCSEEEECCCC
T ss_pred             HHHhCC---CCCEEEECCcc
Confidence            223232   49999999984

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.18  E-value=0.0014  Score=57.29  Aligned_cols=79  Identities=14%  Similarity=0.076  Sum_probs=49.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHH----HHhcCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLANL  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~  259 (378)
                      ++++||+|++|++|...++.+...|++|+++.+.    +++.+    .++..|... .+..+-.+.+.+.    +.....
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   77 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999998899999998853    33332    223334332 2222222222222    222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        78 g~id~lv~nAg~   89 (256)
T 1geg_A           78 GGFDVIVNNAGV   89 (256)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.18  E-value=0.002  Score=56.26  Aligned_cols=80  Identities=15%  Similarity=0.040  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+ ...++|.... +..+-.+.+.+    .+.....|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADV----LDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999885    344443 3445554322 22222222222    112112234


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        80 iD~lv~nAg~   89 (254)
T 1hdc_A           80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.18  E-value=0.00072  Score=59.12  Aligned_cols=81  Identities=16%  Similarity=0.156  Sum_probs=50.6

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhC-C-CcEEE--ccCccc---HHH-HHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL-G-ADEVF--TESQLE---VKN-VKG  254 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~-g-a~~vi--~~~~~~---~~~-i~~  254 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+    .+. + ....+  |....+   .++ +.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGR----NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            35789999999999999999988889999999885    34433222    221 2 11222  321122   222 222


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      .....|++|++|+++|.
T Consensus        86 ~~~~~g~id~lv~nAg~  102 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGL  102 (252)
T ss_dssp             HHHHCSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEECCcc
Confidence            22233459999999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.17  E-value=0.0021  Score=56.28  Aligned_cols=80  Identities=10%  Similarity=0.070  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCccc---HHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQLE---VKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    +.++.+ ...+++.... +..+-.+   ++. +.+.....|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADI----DIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988889999998885    344433 3344554332 2222222   222 2222233345


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        83 id~lv~~Ag~   92 (259)
T 4e6p_A           83 LDILVNNAAL   92 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.16  E-value=0.0012  Score=55.84  Aligned_cols=97  Identities=20%  Similarity=0.289  Sum_probs=66.1

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i~~  254 (378)
                      ....+.++++||-.|+ |. |..++.+|+. +.+|+++.    .+++..+.++    .+|..   .++..+..   +   
T Consensus        49 ~~l~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~v~~vD----~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~---~---  115 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-GS-GSVSVEWCLA-GGRAITIE----PRADRIENIQKNIDTYGLSPRMRAVQGTAP---A---  115 (204)
T ss_dssp             HHHCCCTTCEEEEETC-TT-CHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCTT---G---
T ss_pred             HhcCCCCCCEEEEecC-CC-CHHHHHHHHc-CCEEEEEe----CCHHHHHHHHHHHHHcCCCCCEEEEeCchh---h---
Confidence            3467889999999998 44 8899999988 88988887    4666665554    45554   22222211   1   


Q ss_pred             HhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      .....+.+|+|+...+..  .++.+.+.|+++|+++...
T Consensus       116 ~~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          116 ALADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             GGTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hcccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence            111112499999776543  3578889999999998765

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.16  E-value=0.00094  Score=57.09  Aligned_cols=95  Identities=16%  Similarity=0.193  Sum_probs=62.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .+|||+||+|.+|...++.+...|.+|+++.|..    ++..   .+ ..-.++..+-.+.+.+.+...+   +|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~----~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP----EKIK---IENEHLKVKKADVSSLDEVCEVCKG---ADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG----GGCC---CCCTTEEEECCCTTCHHHHHHHHTT---CSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc----ccch---hccCceEEEEecCCCHHHHHHHhcC---CCEEEEe
Confidence            5899999999999999999999999999998642    2211   11 1122333333345566666654   9999999


Q ss_pred             CCCcc---------H---HHHHHhcccC--CEEEEEecCC
Q 017064          269 VGGNS---------A---SKVLKFLSQG--GTMVTYGGMS  294 (378)
Q Consensus       269 ~g~~~---------~---~~~~~~l~~~--G~~v~~g~~~  294 (378)
                      +|...         .   ...++.++..  +++|+++...
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            98641         1   3344555443  4899988543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.16  E-value=0.0024  Score=56.05  Aligned_cols=83  Identities=16%  Similarity=0.223  Sum_probs=51.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC---CcEEEEecCCCCcHHHHHHHHhCCCc-EEEccC--cc-cH----HHHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES--QL-EV----KNVKGL  255 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g---~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~--~~-~~----~~i~~~  255 (378)
                      -.++++||+|++|++|...++.+...|   ++|+++.+.....+ ..+.+...+.. ..+..+  +. .+    +.+.+.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            346799999999999999999888889   89999987643333 22222222322 223222  21 22    223232


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .+.. ++|++|+++|.
T Consensus        98 ~g~~-~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQ-GLNVLFNNAGI  112 (267)
T ss_dssp             HGGG-CCSEEEECCCC
T ss_pred             cCCC-CccEEEECCCc
Confidence            3311 39999999984

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.16  E-value=0.0063  Score=53.45  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=31.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH   41 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            46899999999999999999999999999998865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.001  Score=59.25  Aligned_cols=80  Identities=18%  Similarity=0.231  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcEEE-ccCcccHHHHHH----HhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVF-TESQLEVKNVKG----LLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi-~~~~~~~~~i~~----~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    ++++.+.+    +..|....+ ..+-.+.+.+.+    ....
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR----NGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS----CHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999998889999988875    34443322    223443332 222122222221    1112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        83 ~g~iD~lvnnAg~   95 (280)
T 3tox_A           83 FGGLDTAFNNAGA   95 (280)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.15  E-value=0.0032  Score=55.63  Aligned_cols=81  Identities=9%  Similarity=0.036  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi--~~~~~-~~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.....+   +...++|... .+  |-.+. .++. +.......|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA---GAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHH---HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH---HHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999899999999886532222   2223334332 22  22221 1221 11111222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.15  E-value=0.0014  Score=58.80  Aligned_cols=80  Identities=19%  Similarity=0.260  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCC---c-EEEccCcccHHHHH----HH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGA---D-EVFTESQLEVKNVK----GL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga---~-~vi~~~~~~~~~i~----~~  255 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+    .++..|.   . ..+..+-.+.+.+.    +.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR----NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            4689999999999999999998889999999885    333332    2233343   2 22222222222221    11


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      ....|++|++|+++|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGA  116 (297)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            1112349999999983

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.15  E-value=0.0029  Score=55.42  Aligned_cols=81  Identities=19%  Similarity=0.226  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHH----hcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGL----LANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~----~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.....   .+..++++... ++..+-.+.+.+.+.    ....+++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG---EAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH---HHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH---HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            468999999999999999999988999999998753221   22333444332 222222222222221    1111249


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        88 d~li~~Ag~   96 (265)
T 2o23_A           88 DVAVNCAGI   96 (265)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999984

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.15  E-value=0.0015  Score=58.10  Aligned_cols=35  Identities=14%  Similarity=0.255  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS   39 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999988899999998853

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.14  E-value=0.0017  Score=56.79  Aligned_cols=84  Identities=17%  Similarity=0.176  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHHh----cCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGLL----ANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~~----~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.....++..+.++..+... .+..+-.+.+.+.+..    ...+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999888899999998863211111122333344332 2222222222222211    111249


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.14  E-value=0.0013  Score=58.61  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|+++||+|++|++|...++.+...|++|+++.+.
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~   61 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS   61 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999999999999888899999999863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.14  E-value=0.0015  Score=56.36  Aligned_cols=79  Identities=15%  Similarity=0.118  Sum_probs=50.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----H-hCCCcEE-EccCcccHHHHHHHhc----C
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----K-GLGADEV-FTESQLEVKNVKGLLA----N  258 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~-~~ga~~v-i~~~~~~~~~i~~~~~----~  258 (378)
                      ++++||+|+++++|...++.+...|++|+++.+.    .++.+.+    . ..|.... +..+-.+.+.+.+...    .
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER   77 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999998863    3333222    1 3344432 2222222223222211    1


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        78 ~g~id~li~~Ag~   90 (235)
T 3l77_A           78 FGDVDVVVANAGL   90 (235)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            1249999999984

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.13  E-value=0.0012  Score=58.71  Aligned_cols=96  Identities=13%  Similarity=-0.042  Sum_probs=63.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|||+|++|.+|...++.+... |.+|++++|.    .++...+...+... +..+-.+.+.+.+...+   +|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~----~~~~~~~~~~~v~~-~~~D~~d~~~l~~~~~~---~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN----VEKVPDDWRGKVSV-RQLDYFNQESMVEAFKG---MDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS----GGGSCGGGBTTBEE-EECCTTCHHHHHHHTTT---CSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC----HHHHHHhhhCCCEE-EEcCCCCHHHHHHHHhC---CCEEEEeC
Confidence            5899999999999999888877 9999999974    33322223334433 33333344566666653   99999999


Q ss_pred             CCcc--------HHHHHHhcccC--CEEEEEecCC
Q 017064          270 GGNS--------ASKVLKFLSQG--GTMVTYGGMS  294 (378)
Q Consensus       270 g~~~--------~~~~~~~l~~~--G~~v~~g~~~  294 (378)
                      +...        ....++.++..  +++|+++...
T Consensus        74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8521        13445555543  5899998654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.13  E-value=0.0033  Score=55.16  Aligned_cols=80  Identities=16%  Similarity=0.101  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEEccCcccHHHHH----HHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNVK----GLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~-~vi~~~~~~~~~i~----~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.+ .++... ..+..+-.+.+.+.    +.....|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADL----DVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999889999999885    34444333 344321 22222222222222    11111224


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        87 iD~lv~~Ag~   96 (263)
T 3ak4_A           87 FDLLCANAGV   96 (263)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.13  E-value=0.0016  Score=57.58  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.   .++..    +.+++.|.... +..+-.+.+.+.    +....
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS---NAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999998888899999999864   23322    23344554433 322322222221    12111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus       105 ~g~id~li~nAg~  117 (271)
T 4iin_A          105 DGGLSYLVNNAGV  117 (271)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2249999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.12  E-value=0.0016  Score=57.49  Aligned_cols=81  Identities=14%  Similarity=0.123  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.   +.++.    +.++..|.... +..+-.+.+.+    .+....
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS---SAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999888899999988863   23332    23344454433 22222222221    112122


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus       104 ~g~id~lv~nAg~  116 (269)
T 4dmm_A          104 WGRLDVLVNNAGI  116 (269)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999985

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.12  E-value=0.0017  Score=56.89  Aligned_cols=81  Identities=14%  Similarity=0.212  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.   +.++.    +.++..+... .+..+-.+.+.+.    +....
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999888889999998862   23332    2233344432 2222222222222    11111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        83 ~g~id~li~~Ag~   95 (261)
T 1gee_A           83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2249999999984

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.12  E-value=0.0018  Score=56.83  Aligned_cols=80  Identities=16%  Similarity=0.195  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccHHHH----HHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEVKNV----KGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~~~i----~~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .++.+    .++..|.... +..+-.+.+.+    .+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999998853    33332    2233454332 22222222221    112112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        82 ~g~id~lv~nAg~   94 (262)
T 1zem_A           82 FGKIDFLFNNAGY   94 (262)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            2349999999984

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.11  E-value=0.0015  Score=56.84  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHHHHHHh----cC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVKGLL----AN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~i~~~~----~~  258 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    +++.    +.++..+... .+..+-.+.+.+.+..    ..
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999888889999998863    3332    2233344332 2222222222222211    11


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        86 ~~~~d~vi~~Ag~   98 (255)
T 1fmc_A           86 LGKVDILVNNAGG   98 (255)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1249999999984

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.11  E-value=0.0024  Score=55.92  Aligned_cols=83  Identities=12%  Similarity=0.051  Sum_probs=49.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--cHHHHHHHHhCCCcEE-EccCcccHHHH----HHHhcCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--~~~~~~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~  261 (378)
                      ++++||+|++|++|...++.+...|++|+++.+....  .++..+.++..|.... +..+-.+.+.+    .+.....|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999998888889999998864211  1111222333344322 22222222221    111112234


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.11  E-value=0.0035  Score=54.98  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC----CCcE-EEccCcccHHHHHH----Hhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADE-VFTESQLEVKNVKG----LLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----ga~~-vi~~~~~~~~~i~~----~~~  257 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.+ .++    |... .+..+-.+.+.+.+    ...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR----QVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999889999999885    34433322 221    4332 22222222222221    111


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        82 ~~g~id~lv~~Ag~   95 (263)
T 3ai3_A           82 SFGGADILVNNAGT   95 (263)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            12249999999984

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.11  E-value=0.0014  Score=58.15  Aligned_cols=83  Identities=12%  Similarity=0.148  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .++++||+|++|++|...+..+...|++|+++.+.....++..+.++..+... .+..+-.+.+.+.    ......|.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999999876433333333334445432 2222222222221    111112349


Q ss_pred             cEEEeCCC
Q 017064          263 ALGFNCVG  270 (378)
Q Consensus       263 Dvvid~~g  270 (378)
                      |++|+++|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.11  E-value=0.00088  Score=57.93  Aligned_cols=79  Identities=19%  Similarity=0.155  Sum_probs=49.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      ++++||+|+++++|...++.+...|++|+++.+    ++++.+.+ .+++... .+..+-.+.+.+.    +.....|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGR----RYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999988889999999885    44444333 2333222 2222212222211    111112359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        79 d~lvnnAg~   87 (235)
T 3l6e_A           79 ELVLHCAGT   87 (235)
T ss_dssp             SEEEEECCC
T ss_pred             cEEEECCCC
Confidence            999999985

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.11  E-value=0.0026  Score=56.40  Aligned_cols=80  Identities=13%  Similarity=0.111  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCcccHHHH----HHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQLEVKNV----KGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    ++++.+ ...+++.... +..+-.+.+.+    .+.....|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV----NEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999899999999885    344433 3344554432 22222222221    112122235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus       102 iD~lv~nAg~  111 (277)
T 4dqx_A          102 VDVLVNNAGF  111 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.10  E-value=0.0011  Score=58.25  Aligned_cols=81  Identities=15%  Similarity=0.110  Sum_probs=49.3

Q ss_pred             CCCEEEEeCCCc-hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-c-EEEccCcccH-------HHHHHHhc
Q 017064          188 SGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVFTESQLEV-------KNVKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g-~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~-~vi~~~~~~~-------~~i~~~~~  257 (378)
                      .++++||+|++| ++|...++.+...|++|+++.+.....++..+.+++.+. . ..+..+-.+.       +++.+.. 
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA-   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh-
Confidence            478999999985 899999998888899999988632111111222333332 2 2222222222       2233323 


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                        +++|++|+++|.
T Consensus       100 --g~id~li~~Ag~  111 (266)
T 3o38_A          100 --GRLDVLVNNAGL  111 (266)
T ss_dssp             --SCCCEEEECCCC
T ss_pred             --CCCcEEEECCCc
Confidence              349999999984

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0028  Score=57.60  Aligned_cols=84  Identities=14%  Similarity=0.126  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC-CCCcHHHHHHH----HhCCCcE-EEccCcccHHH----HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD-RAGSDEAKEKL----KGLGADE-VFTESQLEVKN----VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~-~~~~~~~~~~~----~~~ga~~-vi~~~~~~~~~----i~~~~~  257 (378)
                      .++++||+|++|++|...++.+...|++|++++|. ...+.++.+.+    +..|... .+..+-.+.+.    +.+...
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999998874 22234443333    2334332 22222222111    222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            22359999999993

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0023  Score=56.02  Aligned_cols=78  Identities=17%  Similarity=0.208  Sum_probs=46.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---H----HHHHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---V----KNVKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~----~~i~~~~~~~  259 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..+..   .+...+++.. ..+..+-.+   +    +.+.+..   
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~---   79 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG---EEPAAELGAAVRFRNADVTNEADATAALAFAKQEF---   79 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH---
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc---
Confidence            468999999999999999999989999999988653221   2222334432 222222222   2    2232333   


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        80 g~id~lv~nAg~   91 (257)
T 3tpc_A           80 GHVHGLVNCAGT   91 (257)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            349999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.10  E-value=0.002  Score=56.75  Aligned_cols=35  Identities=11%  Similarity=0.076  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   46 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999888899999998853

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.10  E-value=0.0013  Score=58.47  Aligned_cols=80  Identities=20%  Similarity=0.212  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-H---H-HhCCCcEE-EccCccc---HHH-HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-K---L-KGLGADEV-FTESQLE---VKN-VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~---~-~~~ga~~v-i~~~~~~---~~~-i~~~~~  257 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    .++.+ .   + ...|.... +..+-.+   ++. +.+...
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS----LPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999998999999998863    33322 2   2 12343332 2222222   211 222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus       102 ~~g~id~lv~nAg~  115 (277)
T 4fc7_A          102 EFGRIDILINCAAG  115 (277)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCcC
Confidence            22359999999983

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.08  E-value=0.002  Score=57.24  Aligned_cols=83  Identities=12%  Similarity=0.058  Sum_probs=53.6

Q ss_pred             CCCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHH----HHHhcCC
Q 017064          187 NSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNV----KGLLANL  259 (378)
Q Consensus       187 ~~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i----~~~~~~~  259 (378)
                      -.++++||+||+  +++|...++.+...|++|+++.+..  ..++.+.+. +.+....+..+-.+.+.+    .+.....
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            357899999998  5699999988888999999988653  335555443 444434443332222222    2222222


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|+++|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            359999999984

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.08  E-value=0.0022  Score=58.22  Aligned_cols=85  Identities=11%  Similarity=0.125  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC----------CCCcHHHHHHHHhCCCcEEEc-cCcccHHHH---
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD----------RAGSDEAKEKLKGLGADEVFT-ESQLEVKNV---  252 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~----------~~~~~~~~~~~~~~ga~~vi~-~~~~~~~~i---  252 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+.          ....++..+.++..|....+. .+-.+.+.+   
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999888889999988753          111222233444555543332 222222222   


Q ss_pred             -HHHhcCCCCCcEEEeCCCC
Q 017064          253 -KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 -~~~~~~~g~~Dvvid~~g~  271 (378)
                       .+.....|++|++|+++|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence             2222222359999999984

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.08  E-value=0.0018  Score=58.78  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC-----CCcHHHH----HHHHhCCCcEEEccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-----AGSDEAK----EKLKGLGADEVFTESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~-----~~~~~~~----~~~~~~ga~~vi~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+..     ..+.++.    +.++..+...+.|..+. .++. +....
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            478999999999999999999888999998864310     0122222    23344555555554442 2222 22222


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...|++|++|+++|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            223359999999983

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.07  E-value=0.002  Score=55.81  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCCcE-EEccCcccHHHHHH----Hhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADE-VFTESQLEVKNVKG----LLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga~~-vi~~~~~~~~~i~~----~~~  257 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+.+    ++ .+... .+..+-.+.+.+.+    ...
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT----SGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999988889999999885    33333322    11 34332 22222222222222    222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+++|++|+++|.
T Consensus        82 ~~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           82 LVDGIDILVNNAGI   95 (248)
T ss_dssp             HSSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence            22359999999984

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.07  E-value=0.0043  Score=55.93  Aligned_cols=96  Identities=15%  Similarity=0.181  Sum_probs=63.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|||+|++|.+|...++.+...|.+|++++|......+....+...|+..+ ..+-.+.+.+.+...+   +|+||.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v-~~Dl~d~~~l~~a~~~---~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIV-KGELDEHEKLVELMKK---VDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEE-EecCCCHHHHHHHHcC---CCEEEECC
Confidence            4799999999999999999888899999999864322233333345565443 3333344566666654   99999999


Q ss_pred             CCcc---HHHHHHhcccC---CEEEE
Q 017064          270 GGNS---ASKVLKFLSQG---GTMVT  289 (378)
Q Consensus       270 g~~~---~~~~~~~l~~~---G~~v~  289 (378)
                      +...   ....++.++..   +++|.
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~  113 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP  113 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe
Confidence            8532   24455544432   47763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.07  E-value=0.0023  Score=56.11  Aligned_cols=35  Identities=23%  Similarity=0.166  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   37 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG   37 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            46899999999999999999998899999988764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.07  E-value=0.0019  Score=56.31  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN   40 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            57899999999999999999998999999887543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.06  E-value=0.0049  Score=56.07  Aligned_cols=83  Identities=8%  Similarity=0.085  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CC-CcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LG-ADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g-a~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+.+|||+||+|.+|...++.+...|++|+++.+......+..+.+.. .+ ...++..+-.+.+.+.+..... ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-PITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS-CCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc-CCcEE
Confidence            457899999999999999999988999999998764444433333332 12 2233333333444555554432 39999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |++++.
T Consensus        83 ih~A~~   88 (341)
T 3enk_A           83 IHFAAL   88 (341)
T ss_dssp             EECCCC
T ss_pred             EECccc
Confidence            999985

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.06  E-value=0.0015  Score=58.66  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   51 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   51 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999888899999998853

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.05  E-value=0.0023  Score=56.86  Aligned_cols=81  Identities=10%  Similarity=0.080  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--------cHHHH----HHHHhCCCcEEE-ccCccc---H--
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--------SDEAK----EKLKGLGADEVF-TESQLE---V--  249 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--------~~~~~----~~~~~~ga~~vi-~~~~~~---~--  249 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+....        ..++.    +.++..|....+ ..+-.+   +  
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999998864211        12222    233445554332 222222   2  


Q ss_pred             --HHHHHHhcCCCCCcEEEeCCCC
Q 017064          250 --KNVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       250 --~~i~~~~~~~g~~Dvvid~~g~  271 (378)
                        +++.+..   |++|++|+++|.
T Consensus        89 ~~~~~~~~~---g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTL---GGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHH---TCCCEEEECCCC
T ss_pred             HHHHHHHhc---CCCCEEEECCCC
Confidence              2233323   359999999984

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.05  E-value=0.0028  Score=55.51  Aligned_cols=34  Identities=15%  Similarity=0.061  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .++++||+|++|++|...++.+...|++|+++.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r   39 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDL   39 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999988889999999885

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.05  E-value=0.0015  Score=57.53  Aligned_cols=77  Identities=18%  Similarity=0.152  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHh-CCCcEE-E--ccCcc-cH----HHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGADEV-F--TESQL-EV----KNVKG  254 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~ga~~v-i--~~~~~-~~----~~i~~  254 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.    .++.+.    +.+ .|.... +  |-.+. .+    +++.+
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRD----VSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999998863    333322    222 344332 2  22222 22    22333


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      ..+   ++|++|+++|.
T Consensus        95 ~~g---~id~lv~nAg~  108 (266)
T 4egf_A           95 AFG---GLDVLVNNAGI  108 (266)
T ss_dssp             HHT---SCSEEEEECCC
T ss_pred             HcC---CCCEEEECCCc
Confidence            333   49999999984

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.05  E-value=0.0034  Score=55.79  Aligned_cols=77  Identities=13%  Similarity=0.120  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEE-EccCccc---H----HHHHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQLE---V----KNVKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~v-i~~~~~~---~----~~i~~~~~~  258 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    +.++.+. ...++.... +..+-.+   +    +++.+..  
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   77 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDK----SAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF--   77 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC----CHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc--
Confidence            4689999999999999999999899999999885    4444443 345554433 2222222   2    2233333  


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                       |++|++|+++|.
T Consensus        78 -g~iD~lvnnAg~   89 (281)
T 3zv4_A           78 -GKIDTLIPNAGI   89 (281)
T ss_dssp             -SCCCEEECCCCC
T ss_pred             -CCCCEEEECCCc
Confidence             359999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.04  E-value=0.0017  Score=57.40  Aligned_cols=80  Identities=14%  Similarity=0.181  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC---cEEEccCcccHHHHHHHh----cCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA---DEVFTESQLEVKNVKGLL----ANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga---~~vi~~~~~~~~~i~~~~----~~~  259 (378)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+ ...+++.   -.++..+-.+.+.+.+..    ...
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----ChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999988889999999875    333332 2333332   222322222222222211    111


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|+++|.
T Consensus        91 ~~id~li~~Ag~  102 (278)
T 2bgk_A           91 GKLDIMFGNVGV  102 (278)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            249999999984

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.04  E-value=0.0019  Score=57.63  Aligned_cols=76  Identities=11%  Similarity=0.039  Sum_probs=50.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhC----CCcE-EEccCcccHHHHHHHhcCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGL----GADE-VFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~----ga~~-vi~~~~~~~~~i~~~~~~~g  260 (378)
                      -+|+++||+|++|++|.+.+..+...|++|+++.|    +.++.+ .++++    +... ..|..  +.+.+.+....  
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R----~~~~~~~l~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~--  188 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR----KLDKAQAAADSVNKRFKVNVTAAETA--DDASRAEAVKG--  188 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHTCCCEEEECC--SHHHHHHHTTT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEecCC--CHHHHHHHHHh--
Confidence            36789999998899999999999999999887775    334433 22222    2221 12222  22345555443  


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                       +|++|+|+|.
T Consensus       189 -~DvlVn~ag~  198 (287)
T 1lu9_A          189 -AHFVFTAGAI  198 (287)
T ss_dssp             -CSEEEECCCT
T ss_pred             -CCEEEECCCc
Confidence             8999999973

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.04  E-value=0.0034  Score=55.34  Aligned_cols=80  Identities=18%  Similarity=0.182  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-H----HhCCCcEE-EccCcccHHHHH----HHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-L----KGLGADEV-FTESQLEVKNVK----GLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~----~~~ga~~v-i~~~~~~~~~i~----~~~~  257 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.    .++.+. .    +..|.... +..+-.+.+.+.    +...
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999998899999998863    333322 2    22354332 222222222221    1111


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        96 ~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           96 KFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            12349999999984

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.04  E-value=0.0027  Score=56.41  Aligned_cols=81  Identities=14%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhC-CCcEE-EccCcccHHH----HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGL-GADEV-FTESQLEVKN----VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~-ga~~v-i~~~~~~~~~----i~~~~~  257 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   ..++.+    .+... +.... +..+-.+.+.    +.+...
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG---APDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC---CHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999998999999988753   233322    22332 33322 2222222222    222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus       101 ~~g~iD~lv~nAg~  114 (281)
T 3v2h_A          101 RFGGADILVNNAGV  114 (281)
T ss_dssp             HTSSCSEEEECCCC
T ss_pred             HCCCCCEEEECCCC
Confidence            23359999999985

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.04  E-value=0.0023  Score=56.04  Aligned_cols=84  Identities=19%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-EEccCccc---HHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLE---VKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~  261 (378)
                      .++++||+|++|++|...++.+...|++|+++.+......+..+.+ .+.+... .+..+-.+   ++. +.......+.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999988889999999987533222222222 2234332 22222222   222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.04  E-value=0.0053  Score=48.20  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=57.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .++|+|.|+ |.+|...++.+...|.+|+++.    .++++.+.+++.|...+ ..+..+.+.+.+. + ..++|++|.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id----~~~~~~~~~~~~~~~~~-~gd~~~~~~l~~~-~-~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVD----KSKEKIELLEDEGFDAV-IADPTDESFYRSL-D-LEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHTTCEEE-ECCTTCHHHHHHS-C-CTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEE----CCHHHHHHHHHCCCcEE-ECCCCCHHHHHhC-C-cccCCEEEEe
Confidence            468999999 9999999999999999999888    47788888877776543 3343343444443 2 1249999999


Q ss_pred             CCCccH
Q 017064          269 VGGNSA  274 (378)
Q Consensus       269 ~g~~~~  274 (378)
                      ++.+..
T Consensus        78 ~~~~~~   83 (141)
T 3llv_A           78 GSDDEF   83 (141)
T ss_dssp             CSCHHH
T ss_pred             cCCHHH
Confidence            996543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.04  E-value=0.0035  Score=55.42  Aligned_cols=84  Identities=17%  Similarity=0.203  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-------cHHHHHHHHhCCCcEE-EccCccc---HHH-HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------SDEAKEKLKGLGADEV-FTESQLE---VKN-VKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-------~~~~~~~~~~~ga~~v-i~~~~~~---~~~-i~~~  255 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+....       .++..+.++..|.... +..+-.+   ++. +.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            47899999999999999999888899999999876432       1222333344454332 2222222   222 1122


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      ....|++|++|+++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2222359999999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.03  E-value=0.0025  Score=56.59  Aligned_cols=85  Identities=13%  Similarity=0.050  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC---------CcHHHHH----HHHhCCCcEEE---ccCcc-cH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---------GSDEAKE----KLKGLGADEVF---TESQL-EV  249 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~---------~~~~~~~----~~~~~ga~~vi---~~~~~-~~  249 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+...         .++++.+    .++..|.....   |-.+. .+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            45789999999999999999999899999999875210         1333332    23445544332   22221 12


Q ss_pred             HH-HHHHhcCCCCCcEEEeCCCC
Q 017064          250 KN-VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       250 ~~-i~~~~~~~g~~Dvvid~~g~  271 (378)
                      ++ +.+.....|++|++|+++|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            21 11111122359999999984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.01  E-value=0.0035  Score=55.79  Aligned_cols=81  Identities=11%  Similarity=0.147  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-------cHHHHHHHHhCCCcEE-E--ccCcc-cH----HHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------SDEAKEKLKGLGADEV-F--TESQL-EV----KNV  252 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-------~~~~~~~~~~~ga~~v-i--~~~~~-~~----~~i  252 (378)
                      .++++||+|+++++|...++.+...|++|+++.+....       .++..+.++..|.... +  |-.+. .+    +++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999888899999999876431       1222334444454332 2  22221 12    223


Q ss_pred             HHHhcCCCCCcEEEeCCCC
Q 017064          253 KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~  271 (378)
                      .+..   |++|++|+++|.
T Consensus        88 ~~~~---g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQF---GGIDICVNNASA  103 (285)
T ss_dssp             HHHH---SCCSEEEECCCC
T ss_pred             HHHc---CCCCEEEECCCC
Confidence            3333   359999999984

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.01  E-value=0.0037  Score=54.73  Aligned_cols=80  Identities=18%  Similarity=0.227  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEE-EccCccc---HHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQLE---VKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~  261 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    ++++.+. ..+++.... +..+-.+   +++ +.+.....++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR----DKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999899999999885    4444433 344554332 2222222   221 1112112234


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        84 id~li~~Ag~   93 (261)
T 3n74_A           84 VDILVNNAGI   93 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999984

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.01  E-value=0.0022  Score=56.87  Aligned_cols=35  Identities=17%  Similarity=0.095  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC   46 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence            57899999999999999999988999999988754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.01  E-value=0.0015  Score=56.82  Aligned_cols=79  Identities=16%  Similarity=0.058  Sum_probs=48.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH---HHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV---KNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~---~~i~~~~~~~g~~Dv  264 (378)
                      .++++||+|++|++|...++.+.. |++|+++.+    ++++.+.+.+......+..+-.+.   +.+.+.....+++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGR----NPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEES----CHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeC----CHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCE
Confidence            368999999999999988877755 899988884    566665555543323332222111   111222233346999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus        79 lv~~Ag~   85 (245)
T 3e9n_A           79 LVHAAAV   85 (245)
T ss_dssp             EEECC--
T ss_pred             EEECCCc
Confidence            9999985

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.01  E-value=0.0026  Score=57.10  Aligned_cols=84  Identities=12%  Similarity=0.099  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC--------CcHHHH----HHHHhCCCcEEE-ccCcccHHHH--
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------GSDEAK----EKLKGLGADEVF-TESQLEVKNV--  252 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~--------~~~~~~----~~~~~~ga~~vi-~~~~~~~~~i--  252 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+...        .+.++.    +.++..|....+ ..+-.+.+.+  
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            5789999999999999999999899999999875411        113333    233445554332 2222222222  


Q ss_pred             --HHHhcCCCCCcEEEeCCCC
Q 017064          253 --KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 --~~~~~~~g~~Dvvid~~g~  271 (378)
                        .+.....|++|++|+++|.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence              2221222359999999983

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.01  E-value=0.0041  Score=57.11  Aligned_cols=81  Identities=14%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-------HHHHHHHHhCCCcEEE---ccCcc-cH----HHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-------DEAKEKLKGLGADEVF---TESQL-EV----KNV  252 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-------~~~~~~~~~~ga~~vi---~~~~~-~~----~~i  252 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.....       .+..+.++..|....+   |-.+. .+    +++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999998888999999998764321       1233445556654332   22221 12    223


Q ss_pred             HHHhcCCCCCcEEEeCCCC
Q 017064          253 KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~  271 (378)
                      .+..+   ++|++|+++|.
T Consensus       124 ~~~~g---~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFG---GIDILVNNASA  139 (346)
T ss_dssp             HHHHS---CCCEEEECCCC
T ss_pred             HHHcC---CCCEEEECCCC
Confidence            33333   49999999984

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.00  E-value=0.0027  Score=56.20  Aligned_cols=34  Identities=18%  Similarity=0.118  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            5789999999999999999999999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.99  E-value=0.002  Score=56.61  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE--ccCcc-cHHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+...   +      .+.....+  |-.+. .++. +.+.....|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~---~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   80 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP---E------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVD   80 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC---T------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch---h------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999886532   1      11111122  22221 2222 222233334699


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (261)
T 4h15_A           81 VIVHMLGG   88 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.98  E-value=0.0022  Score=55.62  Aligned_cols=76  Identities=9%  Similarity=-0.022  Sum_probs=49.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEE-e--cCCCCcHHHHH-HHHhC-CCcEEEccCcccHHH-HHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-I--RDRAGSDEAKE-KLKGL-GADEVFTESQLEVKN-VKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~-~--~~~~~~~~~~~-~~~~~-ga~~vi~~~~~~~~~-i~~~~~~~g~~  262 (378)
                      |+++||+|+++++|...++.+...|++|+++ .  +.    +++.+ ...++ |.+ +.  +...++. +.+.....|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~----~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD----AAERQRFESENPGTI-AL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS----HHHHHHHHHHSTTEE-EC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC----HHHHHHHHHHhCCCc-cc--CHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998899999887 4  53    33333 33444 432 22  2222222 22333333459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        74 D~lv~~Ag~   82 (244)
T 1zmo_A           74 DTIVSNDYI   82 (244)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999983

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.0027  Score=56.38  Aligned_cols=79  Identities=18%  Similarity=0.141  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-E--ccCcc-cH----HHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-F--TESQL-EV----KNVKG  254 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i--~~~~~-~~----~~i~~  254 (378)
                      ..++++||+|+++++|...++.+...|++|+++.+.   ++++.    +.++..|.... +  |-.+. .+    +.+.+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG---DAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---CHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998999999988743   33332    23344454432 2  22221 22    22333


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      ..   |++|++|+++|.
T Consensus       104 ~~---g~iD~lvnnAg~  117 (280)
T 4da9_A          104 EF---GRIDCLVNNAGI  117 (280)
T ss_dssp             HH---SCCCEEEEECC-
T ss_pred             Hc---CCCCEEEECCCc
Confidence            33   359999999985

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.97  E-value=0.0079  Score=55.27  Aligned_cols=100  Identities=17%  Similarity=0.188  Sum_probs=63.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-cccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +.+|||+|++|.+|...++.+...|.+|++++|... . .+.+.+...+...++..+ -.+.+.+.+...+   +|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~-~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~---~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-G-LIAEELQAIPNVTLFQGPLLNNVPLMDTLFEG---AHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-S-HHHHHHHTSTTEEEEESCCTTCHHHHHHHHTT---CSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC-h-hhHHHHhhcCCcEEEECCccCCHHHHHHHHhc---CCEEEE
Confidence            468999999999999999888888999999987642 2 112233333222333334 3344556666554   999998


Q ss_pred             CCCCc--c----HHHHHHhccc-C--CEEEEEecC
Q 017064          268 CVGGN--S----ASKVLKFLSQ-G--GTMVTYGGM  293 (378)
Q Consensus       268 ~~g~~--~----~~~~~~~l~~-~--G~~v~~g~~  293 (378)
                      +++..  .    ....++.++. +  +++|+++..
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            77653  1    1334444433 3  599999854

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.97  E-value=0.0027  Score=56.36  Aligned_cols=78  Identities=13%  Similarity=0.115  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCccc---HHHHHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQLE---VKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~~---~~~i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+    +.++.+ ...+++.... +..+-.+   +..+.+.....+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADL----AAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999988889999999885    444443 3345554432 2222222   23322222344458


Q ss_pred             cEEEeCC
Q 017064          263 ALGFNCV  269 (378)
Q Consensus       263 Dvvid~~  269 (378)
                      |++|.+.
T Consensus       105 d~lv~~a  111 (281)
T 3ppi_A          105 RYAVVAH  111 (281)
T ss_dssp             EEEEECC
T ss_pred             CeEEEcc
Confidence            9999983

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.96  E-value=0.0031  Score=56.15  Aligned_cols=35  Identities=17%  Similarity=0.106  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            57899999999999999999998999999988754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.96  E-value=0.0029  Score=54.93  Aligned_cols=81  Identities=20%  Similarity=0.231  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   +.++.    +.++..|.+.. +..+-.+.+.+.    +....
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG---SKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998999999888753   33332    23344555433 222222222222    12122


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 3osu_A           80 FGSLDVLVNNAGI   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.96  E-value=0.0038  Score=55.93  Aligned_cols=80  Identities=14%  Similarity=0.203  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhC----CCcE-EEccCcccHHHHH----HHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL----GADE-VFTESQLEVKNVK----GLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~----ga~~-vi~~~~~~~~~i~----~~~~  257 (378)
                      .++++||+|++|++|...+..+...|++|+++.+.    .++.+. ..++    +... .+..+-.+.+.+.    ....
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999988899999998853    333322 2221    4332 2222222222222    2222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|.+|++|+++|.
T Consensus       101 ~~g~id~li~~Ag~  114 (302)
T 1w6u_A          101 VAGHPNIVINNAAG  114 (302)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999983

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.96  E-value=0.0028  Score=53.04  Aligned_cols=96  Identities=18%  Similarity=0.169  Sum_probs=61.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|+|+|++|.+|...++.+...|.+|+++.|..    ++...+...+. .++..+-.+.+.+.+...+   +|+||+++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~----~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~---~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS----SRLPSEGPRPA-HVVVGDVLQAADVDKTVAG---QDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG----GGSCSSSCCCS-EEEESCTTSHHHHHHHHTT---CSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh----hhcccccCCce-EEEEecCCCHHHHHHHHcC---CCEEEECc
Confidence            6899999999999999999988899999998642    22111101122 2333333344566666653   99999999


Q ss_pred             CCcc-----------HHHHHHhccc--CCEEEEEecC
Q 017064          270 GGNS-----------ASKVLKFLSQ--GGTMVTYGGM  293 (378)
Q Consensus       270 g~~~-----------~~~~~~~l~~--~G~~v~~g~~  293 (378)
                      |...           ....++.+..  .+++++++..
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            8532           1333444433  3689988754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.95  E-value=0.0025  Score=56.56  Aligned_cols=81  Identities=17%  Similarity=0.186  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~  262 (378)
                      .++++||+|++|++|...++.+...|++|+++.+..   +...+...+++... .+..+-.+.+.+.    +.....|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT---EALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG---GGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999989999999998642   22223334454332 2222222222222    121122249


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        81 d~lv~~Ag~   89 (281)
T 3m1a_A           81 DVLVNNAGR   89 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999984

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.95  E-value=0.0064  Score=54.55  Aligned_cols=97  Identities=16%  Similarity=0.246  Sum_probs=63.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      ..+|||+||+|.+|...++.+...|.+|++++|..... +++.+.+   ...|+. ++..+-.+.+.+.+...+   +|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~---~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQ---VDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTT---CSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHHhC---CCE
Confidence            35799999999999999999888899999998753221 4444333   234543 333333344566666654   999


Q ss_pred             EEeCCCCc----c---HHHHHHhcccC---CEEEE
Q 017064          265 GFNCVGGN----S---ASKVLKFLSQG---GTMVT  289 (378)
Q Consensus       265 vid~~g~~----~---~~~~~~~l~~~---G~~v~  289 (378)
                      ||.+++..    .   ....++.++..   +++|.
T Consensus        80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             EEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            99999853    1   24455555444   47774

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.94  E-value=0.0032  Score=54.82  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-cccHHHHHHHhcCCCCCcEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      -.|+++||+|++|++|...++.+...|++|+++.|    +++.   +++++...++ .+ ..+.+.+.+...   ++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~---~~~~~~~~~~-~D~~~~~~~~~~~~~---~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEEL---LKRSGHRYVV-CDLRKDLDLLFEKVK---EVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHH---HHHTCSEEEE-CCTTTCHHHHHHHSC---CCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHH---HHhhCCeEEE-eeHHHHHHHHHHHhc---CCCEE
Confidence            45789999999999999999998889999999885    3332   3344533333 22 223344433333   39999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.93  E-value=0.0033  Score=55.66  Aligned_cols=34  Identities=12%  Similarity=0.175  Sum_probs=31.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .++++||+|++|++|...++.+...|++|+++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   38 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGR   38 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999988889999999885

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.92  E-value=0.016  Score=49.27  Aligned_cols=116  Identities=15%  Similarity=0.044  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|||.|+ |.+|...+..+...|++|+++...  ..++-.+++...+.. .+. .....+.    ..   ++|+||-
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~--~~~~l~~l~~~~~i~-~i~-~~~~~~d----L~---~adLVIa   97 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPT--VSAEINEWEAKGQLR-VKR-KKVGEED----LL---NVFFIVV   97 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSS--CCHHHHHHHHTTSCE-EEC-SCCCGGG----SS---SCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHcCCcE-EEE-CCCCHhH----hC---CCCEEEE
Confidence            4689999999 999999999999999999988743  234433444443333 221 1111111    11   3999999


Q ss_pred             CCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhc-CceEEEEe
Q 017064          268 CVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFW  316 (378)
Q Consensus       268 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~  316 (378)
                      +++.+..+..+...+..|..|.+...+. ..++-...++.+ ++.+.-+.
T Consensus        98 AT~d~~~N~~I~~~ak~gi~VNvvD~p~-~~~f~~Paiv~rg~l~iaIST  146 (223)
T 3dfz_A           98 ATNDQAVNKFVKQHIKNDQLVNMASSFS-DGNIQIPAQFSRGRLSLAIST  146 (223)
T ss_dssp             CCCCTHHHHHHHHHSCTTCEEEC------CCSEECCEEEEETTEEEEEEC
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeCCcc-cCeEEEeeEEEeCCEEEEEEC
Confidence            9999888666655556888877653322 233333444433 45555444

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.90  E-value=0.0033  Score=56.92  Aligned_cols=85  Identities=18%  Similarity=0.137  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC--------CcHHHHH----HHHhCCCcEEE-ccCcccHHHH-
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------GSDEAKE----KLKGLGADEVF-TESQLEVKNV-  252 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~--------~~~~~~~----~~~~~ga~~vi-~~~~~~~~~i-  252 (378)
                      -.|+++||+|+++++|...++.+...|++|+++.+...        .+.++.+    .++..|....+ ..+-.+.+.+ 
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35789999999999999999999899999998865311        1133322    23445544332 2222222222 


Q ss_pred             ---HHHhcCCCCCcEEEeCCCC
Q 017064          253 ---KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 ---~~~~~~~g~~Dvvid~~g~  271 (378)
                         .+.....|++|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence               1121222359999999984

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.90  E-value=0.0059  Score=55.93  Aligned_cols=80  Identities=5%  Similarity=0.061  Sum_probs=53.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hC-----CCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GL-----GADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~-----ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      +.+|||+|++|.+|...++.+...|.+|+++++......++.+.+. .+     ..-.++..+-.+.+.+.+...+   +
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~  103 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG---V  103 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT---C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC---C
Confidence            5789999999999999999888889999999875433333433332 12     1112333333344556665553   9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.+++.
T Consensus       104 d~vih~A~~  112 (352)
T 1sb8_A          104 DYVLHQAAL  112 (352)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCcc
Confidence            999999985

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.89  E-value=0.0049  Score=53.12  Aligned_cols=100  Identities=14%  Similarity=0.160  Sum_probs=62.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+.+|||+|++|++|...++.+...|+  +|+++.|.....++    ...-+. .++..+-.+.+.+.+...   ++|++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~----~~~~~~-~~~~~D~~d~~~~~~~~~---~~d~v   88 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE----EAYKNV-NQEVVDFEKLDDYASAFQ---GHDVG   88 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS----GGGGGC-EEEECCGGGGGGGGGGGS---SCSEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc----cccCCc-eEEecCcCCHHHHHHHhc---CCCEE
Confidence            367999999999999999999888999  99999875321111    001122 222223223344555544   39999


Q ss_pred             EeCCCCccH---------------HHHHHhccc--CCEEEEEecCCC
Q 017064          266 FNCVGGNSA---------------SKVLKFLSQ--GGTMVTYGGMSK  295 (378)
Q Consensus       266 id~~g~~~~---------------~~~~~~l~~--~G~~v~~g~~~~  295 (378)
                      |+++|....               ...++.+..  .+++|+++....
T Consensus        89 i~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           89 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             EECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            999996321               223333333  369999986543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.89  E-value=0.0021  Score=55.53  Aligned_cols=77  Identities=19%  Similarity=0.177  Sum_probs=49.1

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHH-HHHHhcCCCCCcEEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKN-VKGLLANLPEPALGF  266 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~-i~~~~~~~g~~Dvvi  266 (378)
                      ++++||+|++|++|...++.+...|++|+++.+.    +++  ..+++|...+ .|..+.+.+. +.+.....+++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~----~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRN----PEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----CHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999998899999998864    222  2233453322 1222222222 122211122499999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.88  E-value=0.01  Score=58.74  Aligned_cols=82  Identities=11%  Similarity=0.134  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc--ccHHH-HHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKN-VKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~--~~~~~-i~~~~~~~g~~Dv  264 (378)
                      .|+++||+|+++++|.+.++.+...|++|++..+.  ..++..+.+++.|...+...-+  .+.+. +.......|++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            36889999999999999999999999999886532  2333344555566554432222  22222 2222222235999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      +|+++|.
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.87  E-value=0.0042  Score=55.34  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~   56 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN   56 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999888899999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.87  E-value=0.0041  Score=52.84  Aligned_cols=92  Identities=20%  Similarity=0.246  Sum_probs=61.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+...|.+|++++|    ++++...+...+...+ ..+-.+.+.  +...   ++|+||+++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R----~~~~~~~~~~~~~~~~-~~D~~d~~~--~~~~---~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR----DPQKAADRLGATVATL-VKEPLVLTE--ADLD---SVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHTCTTSEEE-ECCGGGCCH--HHHT---TCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe----cccccccccCCCceEE-ecccccccH--hhcc---cCCEEEECCc
Confidence            5999999999999999999889999999996    4555554444444433 222222112  3333   3999999998


Q ss_pred             Cc--------c---HHHHHHhcc-cCCEEEEEec
Q 017064          271 GN--------S---ASKVLKFLS-QGGTMVTYGG  292 (378)
Q Consensus       271 ~~--------~---~~~~~~~l~-~~G~~v~~g~  292 (378)
                      ..        .   ....++.++ .++++|+++.
T Consensus        72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            62        1   134555554 3579999864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.86  E-value=0.002  Score=63.95  Aligned_cols=84  Identities=14%  Similarity=0.181  Sum_probs=49.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec---------CCCCcHHHHHHHHhCCCcEEEccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR---------DRAGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~---------~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+         .....++..+.++..|...+.|..+. +.+. +.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            4789999999999999999988889999998764         21122223344456676666655443 2222 22222


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...|++|++|+++|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence            333469999999984

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.86  E-value=0.0047  Score=53.56  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=48.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-Hh----CCCcE-EEccCcccHHHHHHH----hcC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG----LGADE-VFTESQLEVKNVKGL----LAN  258 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~----~ga~~-vi~~~~~~~~~i~~~----~~~  258 (378)
                      ++++||+|++|++|...+..+...|++|+++.+    +.++.+.+ .+    .+... .+..+-.+.+.+.+.    ...
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDL----SAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ   77 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999988889999999885    33333322 22    23322 222222222222221    111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        78 ~~~id~li~~Ag~   90 (250)
T 2cfc_A           78 FGAIDVLVNNAGI   90 (250)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            1249999999983

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.86  E-value=0.0038  Score=53.98  Aligned_cols=79  Identities=24%  Similarity=0.222  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC-CCc-EEEccCcccH-------HHHHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-GAD-EVFTESQLEV-------KNVKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-ga~-~vi~~~~~~~-------~~i~~~~  256 (378)
                      .++++||+|++|++|...++.+...|  ++|+++.+.    .++.+.+.++ +.. .++..+-.+.       +.+.+..
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC----HHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999988899  999998864    3333334444 322 2222222222       2222223


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      +.. ++|++|+++|.
T Consensus        78 g~~-~id~li~~Ag~   91 (250)
T 1yo6_A           78 GSD-GLSLLINNAGV   91 (250)
T ss_dssp             GGG-CCCEEEECCCC
T ss_pred             CCC-CCcEEEECCcc
Confidence            211 39999999984

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.85  E-value=0.0024  Score=52.08  Aligned_cols=99  Identities=17%  Similarity=0.208  Sum_probs=64.5

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH----hCCCc-EE-EccCcccHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGAD-EV-FTESQLEVKNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~ga~-~v-i~~~~~~~~~i~~  254 (378)
                      ....+.++++||-.|+ | .|..+..+++.. +.+++++.    .+++..+.++    ..|.. .+ +..+..  +.+  
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~~d~~--~~~--   88 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFE----ISEERRERILSNAINLGVSDRIAVQQGAP--RAF--   88 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEEC----SCHHHHHHHHHHHHTTTCTTSEEEECCTT--GGG--
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHHHHhCCCCCEEEecchH--hhh--
Confidence            3457889999999998 4 489999999887 56777665    3666655554    45554 22 222211  111  


Q ss_pred             HhcCCCCCcEEEeCCCCc---cHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGN---SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~g  291 (378)
                       ....+.+|+|+......   .++.+.+.|+++|+++...
T Consensus        89 -~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           89 -DDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             -GGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             -hccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence             11102599999766543   4688999999999998765

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.84  E-value=0.0045  Score=54.24  Aligned_cols=80  Identities=10%  Similarity=0.099  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcE-EEccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADE-VFTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~-vi~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   .++..+.+.    ..+... ++..+-.+.+.+.    +....
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS---DTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999888899999998764   333333332    223222 2222222222222    12112


Q ss_pred             CCCCcEEEeCCC
Q 017064          259 LPEPALGFNCVG  270 (378)
Q Consensus       259 ~g~~Dvvid~~g  270 (378)
                      .+++|++|+++|
T Consensus        83 ~g~id~lv~~Ag   94 (264)
T 3i4f_A           83 FGKIDFLINNAG   94 (264)
T ss_dssp             HSCCCEEECCCC
T ss_pred             hCCCCEEEECCc
Confidence            234999999999

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.84  E-value=0.0051  Score=56.04  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=52.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC-CCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~-~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .+|||+||+|.+|...++.+...|.+|+++.+.. ....+..+.+...+--.++..+-.+.+.+.+...+. ++|+||.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-CCCEEEEC
Confidence            3799999999999999998888999999987632 122233344444442333333333334444443322 39999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      ++.
T Consensus        81 A~~   83 (347)
T 1orr_A           81 AGQ   83 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            985

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.84  E-value=0.0056  Score=52.91  Aligned_cols=75  Identities=17%  Similarity=0.227  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+.+|||+|++|.+|...++.+...  |.+|+++.|    ++++.+.+ ..+... +..+-.+.+.+.+...+   +|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r----~~~~~~~~-~~~~~~-~~~D~~d~~~~~~~~~~---~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR----SAQGKEKI-GGEADV-FIGDITDADSINPAFQG---IDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES----CHHHHHHT-TCCTTE-EECCTTSHHHHHHHHTT---CSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc----CCCchhhc-CCCeeE-EEecCCCHHHHHHHHcC---CCEE
Confidence            4678999999999999999888888  899999885    34443322 122332 22232344566666653   9999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        74 i~~a~~   79 (253)
T 1xq6_A           74 VILTSA   79 (253)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            999884

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.84  E-value=0.0033  Score=55.40  Aligned_cols=79  Identities=15%  Similarity=0.062  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g~~D  263 (378)
                      .++++||+|+++++|...++.+...|++|+++.+    +.++.+.+..... ..+..+-.+   ++. +.+.....|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   89 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR----RVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPAD   89 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEES----CHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence            4689999999999999999998899999999885    4444433221111 222222222   221 111212223499


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        90 ~lvnnAg~   97 (266)
T 3p19_A           90 AIVNNAGM   97 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.84  E-value=0.0034  Score=55.42  Aligned_cols=80  Identities=14%  Similarity=0.148  Sum_probs=50.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCcccH-------HHHH
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLEV-------KNVK  253 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~~-------~~i~  253 (378)
                      ...++++||+|+++++|...++.+...|++|+++.+.   +.++.+    .+++.+.... +..+-.+.       +++.
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAA---NREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999887432   333332    2334454332 22222222       2232


Q ss_pred             HHhcCCCCCcEEEeCCCC
Q 017064          254 GLLANLPEPALGFNCVGG  271 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~  271 (378)
                      +..   |++|++|+++|.
T Consensus       100 ~~~---g~id~li~nAg~  114 (272)
T 4e3z_A          100 RQF---GRLDGLVNNAGI  114 (272)
T ss_dssp             HHH---SCCCEEEECCCC
T ss_pred             HhC---CCCCEEEECCCC
Confidence            323   249999999984

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.83  E-value=0.0028  Score=56.58  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe-cC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII-RD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~-~~  222 (378)
                      .++++||+|+++++|...++.+...|++|+++. +.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~   43 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   43 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC
Confidence            468999999999999999999988999999888 63

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.82  E-value=0.0063  Score=53.70  Aligned_cols=34  Identities=18%  Similarity=0.268  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .++++||+|++|++|...++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   43 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYR   43 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999988889999999885

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.82  E-value=0.0029  Score=57.63  Aligned_cols=83  Identities=10%  Similarity=0.009  Sum_probs=50.1

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC------CCc-EEEccCcccHHHHHHHhcC--C
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL------GAD-EVFTESQLEVKNVKGLLAN--L  259 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~------ga~-~vi~~~~~~~~~i~~~~~~--~  259 (378)
                      +++|||+|+++++|...+..+...|++|+.+.+.....++..+.++..      +.. .++..+-.+.+.+.+....  .
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            578999999999999999999999999888775432222212222221      222 2232232233333332221  2


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |.+|++|+++|.
T Consensus        82 g~iD~lVnnAG~   93 (327)
T 1jtv_A           82 GRVDVLVCNAGL   93 (327)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            359999999984

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.81  E-value=0.0057  Score=53.92  Aligned_cols=37  Identities=14%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      -..|++|||+|+++++|...++.+...|++|+++.+.
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   47 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD   47 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4568999999999999999999888899999998864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.81  E-value=0.0039  Score=54.19  Aligned_cols=35  Identities=20%  Similarity=0.195  Sum_probs=31.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   48 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   48 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999988899999998865

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.81  E-value=0.0051  Score=57.02  Aligned_cols=88  Identities=11%  Similarity=0.149  Sum_probs=55.4

Q ss_pred             hcc-CCCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcH-----------H-HHHHHHhCCCcEE-EccCccc
Q 017064          184 TTL-NSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSD-----------E-AKEKLKGLGADEV-FTESQLE  248 (378)
Q Consensus       184 ~~~-~~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~-----------~-~~~~~~~~ga~~v-i~~~~~~  248 (378)
                      ..+ ..++++||+|+++++|.+.++.+.. .|++|+++.+.....+           + ..+.++..|.... +..+-.+
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            444 5678899999999999988887777 8999998876533222           1 1234455665443 3222222


Q ss_pred             ---HHH-HHHHhcCCCCCcEEEeCCCC
Q 017064          249 ---VKN-VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       249 ---~~~-i~~~~~~~g~~Dvvid~~g~  271 (378)
                         ++. +.+.....|++|++++++|.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence               222 22222333469999999885

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.81  E-value=0.0067  Score=54.28  Aligned_cols=96  Identities=14%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC-CC-cH-HHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AG-SD-EAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~-~~-~~-~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      +.+|||+||+|.+|...++.+...|.+|++++|.. .. .+ ++.+.+   ...|+..+ ..+-.+.+.+.+...+   +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~l~~~~~~---~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL-EGDINDHETLVKAIKQ---V   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---C
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-EeCCCCHHHHHHHHhC---C
Confidence            45799999999999999998888899999998753 10 12 333322   34565433 2333344566666654   9


Q ss_pred             cEEEeCCCCcc---HHHHHHhcccC---CEEE
Q 017064          263 ALGFNCVGGNS---ASKVLKFLSQG---GTMV  288 (378)
Q Consensus       263 Dvvid~~g~~~---~~~~~~~l~~~---G~~v  288 (378)
                      |+||++++...   ....++.++..   .++|
T Consensus        78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            99999998642   23444544432   4776

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.81  E-value=0.0064  Score=53.45  Aligned_cols=81  Identities=11%  Similarity=0.071  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCcccHHHHH----HHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLEVKNVK----GLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~~~~i~----~~~~~  258 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   +.++.    +.++..+.. .++..+-.+.+.+.    +....
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHR---DAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999998999999876643   23222    233334433 23322222222222    11112


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus       102 ~g~id~li~nAg~  114 (267)
T 4iiu_A          102 HGAWYGVVSNAGI  114 (267)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             hCCccEEEECCCC
Confidence            2359999999984

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.80  E-value=0.0035  Score=58.59  Aligned_cols=88  Identities=11%  Similarity=0.145  Sum_probs=56.3

Q ss_pred             hcc-CCCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHH------------HHHHHHhCCCcEE-EccCccc
Q 017064          184 TTL-NSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDE------------AKEKLKGLGADEV-FTESQLE  248 (378)
Q Consensus       184 ~~~-~~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~------------~~~~~~~~ga~~v-i~~~~~~  248 (378)
                      ..+ +.++++||+||++++|++.+..+.. .|++|+++.+..+..++            ..+.++..|.... +..+-.+
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd  134 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFS  134 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCC
Confidence            445 4688999999999999998888777 99999998765432221            1244566675543 3222222


Q ss_pred             ---HHH-HHHHhcCC-CCCcEEEeCCCC
Q 017064          249 ---VKN-VKGLLANL-PEPALGFNCVGG  271 (378)
Q Consensus       249 ---~~~-i~~~~~~~-g~~Dvvid~~g~  271 (378)
                         ++. +....... |++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          135 DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence               222 22222233 469999999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.79  E-value=0.007  Score=55.24  Aligned_cols=92  Identities=16%  Similarity=0.164  Sum_probs=59.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ..+.+|||+||+|.+|...++.+...|.+|+++.+....          .+...+ ..+-.+.+.+.+...+   +|+||
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~-~~Dl~d~~~~~~~~~~---~d~vi   82 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEV-VGSLEDGQALSDAIMG---VSAVL   82 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEE-ESCTTCHHHHHHHHTT---CSEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEE-ecCcCCHHHHHHHHhC---CCEEE
Confidence            446789999999999999999999999999999875321          233333 2232334455555553   99999


Q ss_pred             eCCCCccH----------------HHHHHhcccC--CEEEEEec
Q 017064          267 NCVGGNSA----------------SKVLKFLSQG--GTMVTYGG  292 (378)
Q Consensus       267 d~~g~~~~----------------~~~~~~l~~~--G~~v~~g~  292 (378)
                      .+++....                ...++.+...  +++|+++.
T Consensus        83 h~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           83 HLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             ECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             ECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            99874210                2234444333  48999885

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.79  E-value=0.0078  Score=51.56  Aligned_cols=78  Identities=19%  Similarity=0.210  Sum_probs=51.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-EEccCcccHHHHHHHhcCCC-CCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLEVKNVKGLLANLP-EPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~-vi~~~~~~~~~i~~~~~~~g-~~Dvvi  266 (378)
                      +++||+|+++++|...+..+...|++|+++.+    ++++.+.+ .+++... .+..+-.+.+.+.+...... .+|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGR----SESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEES----CHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence            46999999999999999999999999999985    45554444 4454322 22222233344544443321 359999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        78 ~~Ag~   82 (230)
T 3guy_A           78 HSAGS   82 (230)
T ss_dssp             ECCCC
T ss_pred             EeCCc
Confidence            99984

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.79  E-value=0.0035  Score=54.80  Aligned_cols=74  Identities=12%  Similarity=0.056  Sum_probs=47.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g~~D  263 (378)
                      .++++||+|++|++|...++.+...|++|+++.+..+..+          .-..+..+-.+   ++. +.+.....|.+|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD   89 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIEETHGPVE   89 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999889999999886432111          12223222222   222 222222234599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        90 ~lv~nAg~   97 (253)
T 2nm0_A           90 VLIANAGV   97 (253)
T ss_dssp             EEEEECSC
T ss_pred             EEEECCCC
Confidence            99999984

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.78  E-value=0.0037  Score=55.30  Aligned_cols=96  Identities=15%  Similarity=0.138  Sum_probs=61.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...++.+...  |.+|++++|...    +.+.+...+... +..+-.+.+.+.+...+   +|+||.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~----~~~~~~~~~~~~-~~~D~~d~~~~~~~~~~---~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPA----KAQALAAQGITV-RQADYGDEAALTSALQG---VEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTT----TCHHHHHTTCEE-EECCTTCHHHHHHHTTT---CSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChH----hhhhhhcCCCeE-EEcCCCCHHHHHHHHhC---CCEEEEe
Confidence            4899999999999999888877  899999987532    222233344433 33333344566666553   9999999


Q ss_pred             CCCc------cHHHHHHhccc-C-CEEEEEecCC
Q 017064          269 VGGN------SASKVLKFLSQ-G-GTMVTYGGMS  294 (378)
Q Consensus       269 ~g~~------~~~~~~~~l~~-~-G~~v~~g~~~  294 (378)
                      ++..      .....++.+.. + +++|+++...
T Consensus        73 a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           73 SSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             C--------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            9852      12344444443 2 5899988544

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.77  E-value=0.0035  Score=54.82  Aligned_cols=34  Identities=18%  Similarity=0.146  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHH---cCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARH---RGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~---~g~~vi~~~~  221 (378)
                      .++++||+|+++++|...++.+..   .|++|+++.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r   41 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR   41 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            367899999999999999887776   8999999885

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.76  E-value=0.0034  Score=57.65  Aligned_cols=83  Identities=10%  Similarity=0.071  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|||+|++|.+|...++.+...|.+|+++.+.....++..+.+...+--.++..+-.+.+.+.+...+.+ +|+||.
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~vih   86 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQ-PEIVFH   86 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHC-CSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcC-CCEEEE
Confidence            3578999999999999999988888999999987543222111111111112233333233344444433323 999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        87 ~A~~   90 (357)
T 1rkx_A           87 MAAQ   90 (357)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9984

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.75  E-value=0.0019  Score=55.75  Aligned_cols=98  Identities=18%  Similarity=0.196  Sum_probs=65.2

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcE--EEccCcccHHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNVKGL  255 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~--vi~~~~~~~~~i~~~  255 (378)
                      +...+.++++||-.|+ | .|..+..+++..+.+|+++.    .+++..+.++    ..|...  ++..+..     ..+
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-----~~~  153 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIE----RIPELVEFAKRNLERAGVKNVHVILGDGS-----KGF  153 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCGG-----GCC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEe----CCHHHHHHHHHHHHHcCCCCcEEEECCcc-----cCC
Confidence            3457889999999998 4 79999999998777887776    3566555554    355432  2211110     011


Q ss_pred             hcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+ +.+|+|+.+.+-.. ...+.+.|++||+++..-
T Consensus       154 ~~~-~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          154 PPK-APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             GGG-CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCC-CCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            112 13999998776543 378889999999988764

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.75  E-value=0.0083  Score=52.99  Aligned_cols=100  Identities=15%  Similarity=0.208  Sum_probs=65.5

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHh----C-C--Cc--EEEccCccc
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKG----L-G--AD--EVFTESQLE  248 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~----~-g--a~--~vi~~~~~~  248 (378)
                      +.....+.++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.+++    . |  .+  .++..+-. 
T Consensus        91 i~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~-  163 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYE----QRADHAEHARRNVSGCYGQPPDNWRLVVSDLA-  163 (280)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG-
T ss_pred             HHHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHhcCCCCCcEEEEECchH-
Confidence            334467899999999998 4 788899999875  45777665    35666655543    2 4  22  22222211 


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCC--ccHHHHHHhcccCCEEEEEe
Q 017064          249 VKNVKGLLANLPEPALGFNCVGG--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                        +.  .... +.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       164 --~~--~~~~-~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          164 --DS--ELPD-GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             --GC--CCCT-TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             --hc--CCCC-CceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence              11  0112 249999986654  34588899999999998875

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.74  E-value=0.0056  Score=53.54  Aligned_cols=95  Identities=8%  Similarity=0.155  Sum_probs=67.8

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..+...+....  -.|.+++|.|.++.+|..+++++...|++|+++-+.                       .
T Consensus       130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~-----------------------t  184 (276)
T 3ngx_A          130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK-----------------------T  184 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-----------------------C
T ss_pred             CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-----------------------c
Confidence            345666666777777654  689999999996779999999999999998765421                       0


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+..   .|+||.++|.+.+ ---+++++|..++.+|..
T Consensus       185 ~---~L~~~~~~---ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          185 K---DIGSMTRS---SKIVVVAVGRPGF-LNREMVTPGSVVIDVGIN  224 (276)
T ss_dssp             S---CHHHHHHH---SSEEEECSSCTTC-BCGGGCCTTCEEEECCCE
T ss_pred             c---cHHHhhcc---CCEEEECCCCCcc-ccHhhccCCcEEEEeccC
Confidence            1   12222222   9999999998643 112568999999988843

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.74  E-value=0.0068  Score=52.75  Aligned_cols=82  Identities=16%  Similarity=0.120  Sum_probs=49.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHh-C-CCcE-EE--ccCcc--cHHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG-L-GADE-VF--TESQL--EVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~-~-ga~~-vi--~~~~~--~~~~-i~~~~~~  258 (378)
                      .++++||+|++|++|...++.+...|++ |+++.+..  ..+..+.+.+ . +... .+  |-.+.  .++. +.+....
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE--NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC--CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc--hHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            4689999999999999999999889997 77777642  2233343333 2 2221 22  22221  1211 1222111


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .+++|++|+++|.
T Consensus        82 ~g~id~lv~~Ag~   94 (254)
T 1sby_A           82 LKTVDILINGAGI   94 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            2249999999984

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.74  E-value=0.0074  Score=55.23  Aligned_cols=173  Identities=9%  Similarity=0.101  Sum_probs=94.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc-CC-cEEEEecCCCCcHHHHHHHH-hCC--CcEEEccCcccHHHHHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLK-GLG--ADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~-g~-~vi~~~~~~~~~~~~~~~~~-~~g--a~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      -.+.+|||+||+|.+|...++.+... |. +|+++.|    ++.+...+. .+.  .-..+..+-.+.+.+.+...+   
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r----~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---   91 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR----DELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEG---   91 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES----CHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTT---
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC----ChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhc---
Confidence            35689999999999999999888877 98 8888885    444443332 222  122232333344566666553   


Q ss_pred             CcEEEeCCCCccH------------------HHHHHhccc--CCEEEEEecCCCCCcccc-------chhh---hh----
Q 017064          262 PALGFNCVGGNSA------------------SKVLKFLSQ--GGTMVTYGGMSKKPITVS-------TSAF---IF----  307 (378)
Q Consensus       262 ~Dvvid~~g~~~~------------------~~~~~~l~~--~G~~v~~g~~~~~~~~~~-------~~~~---~~----  307 (378)
                      +|+||.+++....                  ...++...+  -+++|+++..........       ...+   +.    
T Consensus        92 ~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~  171 (344)
T 2gn4_A           92 VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKG  171 (344)
T ss_dssp             CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCC
T ss_pred             CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999985321                  123333333  368999874322111000       0001   11    


Q ss_pred             -cCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCC--cccc----c-eeeccccHHHHHHHHHccCCCC
Q 017064          308 -KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK--LKYD----M-ELVPFNNFQTALSKALGLHGSQ  371 (378)
Q Consensus       308 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--~~~~----~-~~~~l~~~~~a~~~~~~~~~~g  371 (378)
                       .++++.....+..+....     ..+..+.+.+..|.  +...    . .-...+|+.+++..+......|
T Consensus       172 ~~g~~~~~vRpg~v~g~~~-----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g  238 (344)
T 2gn4_A          172 SSQTQFSVVRYGNVVGSRG-----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGG  238 (344)
T ss_dssp             SSCCEEEEECCCEETTCTT-----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSS
T ss_pred             CCCcEEEEEEeccEECCCC-----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCC
Confidence             346666555554443321     12333444555565  3221    1 1256788888776665544444

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.74  E-value=0.0067  Score=55.32  Aligned_cols=82  Identities=12%  Similarity=0.128  Sum_probs=52.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC------cHHHHHHHHh-CCC-cEEEccCcccHHHHHHHhcCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG------SDEAKEKLKG-LGA-DEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~------~~~~~~~~~~-~ga-~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      +.+|||+|++|.+|...++.+...|.+|+++.+....      ..+..+.+.. .+. -.++..+-.+.+.+.+.....+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            3689999999999999998888889999999864322      2333333332 121 1233333333344555444223


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                       +|+||++++.
T Consensus        82 -~d~vih~A~~   91 (348)
T 1ek6_A           82 -FMAVIHFAGL   91 (348)
T ss_dssp             -EEEEEECCSC
T ss_pred             -CCEEEECCCC
Confidence             9999999985

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.73  E-value=0.0052  Score=53.28  Aligned_cols=70  Identities=21%  Similarity=0.235  Sum_probs=45.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC-CCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL-PEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~-g~~Dvvid~  268 (378)
                      ++|||+|++|++|...+..+...|++|+++.+.....+          ..  +..+-.+.+.+.+..... +++|++|++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~--~~~D~~~~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------AD--LSTPGGRETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------CC--TTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------cc--ccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence            47999999999999999888888999999986532111          01  111111222333333211 249999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        70 Ag~   72 (255)
T 2dkn_A           70 AGV   72 (255)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.72  E-value=0.0062  Score=55.43  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe-cC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII-RD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~-~~  222 (378)
                      .++++||+|+++++|...++.+...|++|+++. +.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~   80 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   80 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            468999999999999999999999999999888 63

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.72  E-value=0.0075  Score=53.98  Aligned_cols=97  Identities=19%  Similarity=0.247  Sum_probs=63.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc--HHHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--DEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~--~~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      ..+|+|+||+|.+|...++.+...|.+|++++|.....  +++.+.+   ...|+.. +..+-.+.+.+.+...+   +|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d~~~l~~~~~~---~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI-VHGSIDDHASLVEAVKN---VD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEE-ECCCTTCHHHHHHHHHT---CS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEE-EEeccCCHHHHHHHHcC---CC
Confidence            46799999999999999999888899999998764222  4444333   3445543 33333344556666554   99


Q ss_pred             EEEeCCCCcc---HHHHHHhccc---CCEEEE
Q 017064          264 LGFNCVGGNS---ASKVLKFLSQ---GGTMVT  289 (378)
Q Consensus       264 vvid~~g~~~---~~~~~~~l~~---~G~~v~  289 (378)
                      +||.+++...   ....++.++.   -+++|.
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~  111 (308)
T 1qyc_A           80 VVISTVGSLQIESQVNIIKAIKEVGTVKRFFP  111 (308)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred             EEEECCcchhhhhHHHHHHHHHhcCCCceEee
Confidence            9999998642   2344444433   247763

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.71  E-value=0.0042  Score=56.55  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=51.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +.+|||+||+|.+|...++.+...|.+|+++.+.......  +.+..++.   -..+..+-.+.+.+.+...+.+ +|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQ-PDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHC-CSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhcC-CCEE
Confidence            5789999999999999998888889999999875322111  22333321   1223222223344444443322 8999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        80 ih~A~~   85 (345)
T 2z1m_A           80 YNLAAQ   85 (345)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.71  E-value=0.0024  Score=53.52  Aligned_cols=64  Identities=14%  Similarity=0.226  Sum_probs=43.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      ++||+|++|++|...++.+. .|++|+++.+...              ....|..  +.+.+.+...+.+++|++|+++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~--~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDIT--NIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTT--CHHHHHHHHHHHCCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecC--CHHHHHHHHHHhCCCCEEEECCC
Confidence            79999999999999998888 8999999886421              1112222  22233332222235999999998


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        68 ~   68 (202)
T 3d7l_A           68 S   68 (202)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.70  E-value=0.0039  Score=56.63  Aligned_cols=101  Identities=15%  Similarity=0.128  Sum_probs=62.2

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-----CCCc-EEE-ccCcccHHHHHHHhcC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-----LGAD-EVF-TESQLEVKNVKGLLAN  258 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-----~ga~-~vi-~~~~~~~~~i~~~~~~  258 (378)
                      ..++.+|||+|++|.+|...++.+...|.+|+++++.    .++.+.+.+     .+.. .++ ..+-.+.+.+.+... 
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC----cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-
Confidence            3457899999999999999999888889999999863    333332221     1221 222 222222233444333 


Q ss_pred             CCCCcEEEeCCCCcc---------------HHHHHHhcc---cCCEEEEEecC
Q 017064          259 LPEPALGFNCVGGNS---------------ASKVLKFLS---QGGTMVTYGGM  293 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~---------------~~~~~~~l~---~~G~~v~~g~~  293 (378)
                        ++|+||++++...               ....++.+.   ..+++|+++..
T Consensus        83 --~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           83 --GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             --TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             --CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence              3999999998521               023344443   23799998854

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.70  E-value=0.0068  Score=54.67  Aligned_cols=96  Identities=8%  Similarity=0.138  Sum_probs=63.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC-CC-cHHHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AG-SDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~-~~-~~~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      ..+|||+|++|.+|...++.+...|.+|++++|.. .. .+++.+.+   ...++..+ ..+-.+.+.+.+...+   +|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v-~~D~~d~~~l~~a~~~---~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII-EGEMEEHEKMVSVLKQ---VD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEE-EecCCCHHHHHHHHcC---CC
Confidence            35799999999999999998888899999999753 11 12333332   34455433 3333344566666654   99


Q ss_pred             EEEeCCCCcc---HHHHHHhcccC---CEEE
Q 017064          264 LGFNCVGGNS---ASKVLKFLSQG---GTMV  288 (378)
Q Consensus       264 vvid~~g~~~---~~~~~~~l~~~---G~~v  288 (378)
                      +||.+++...   ....++.+...   +++|
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999998532   24555555443   4776

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.70  E-value=0.0037  Score=55.05  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=67.8

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..+...+.+..---.|++++|.|.++.+|..+++++...|++|++.-+.   +                    
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---t--------------------  195 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---T--------------------  195 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---C--------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---c--------------------
Confidence            34566666666666664434578999999996679999999999999998655311   0                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+.   .+|+||.++|.+.+ ---+++++|-.++.+|..
T Consensus       196 ~---~L~~~~~---~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          196 T---DLKSHTT---KADILIVAVGKPNF-ITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             S---SHHHHHT---TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             h---hHHHhcc---cCCEEEECCCCCCC-CCHHHcCCCcEEEEeccc
Confidence            1   2233333   39999999997644 122678999999988843

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.70  E-value=0.0089  Score=52.57  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=49.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-H---HHHhCCCc-EEEccCcccH-------HHHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-E---KLKGLGAD-EVFTESQLEV-------KNVKG  254 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~---~~~~~ga~-~vi~~~~~~~-------~~i~~  254 (378)
                      ..++++||+|+++++|...++.+...|++|+++.+.   ..++. +   ..+..+.. .++..+-.+.       +.+.+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE---RNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS---CHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            356899999999999999999998999999988743   22222 2   22333432 2222222222       22333


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      ..+   ++|++|+++|.
T Consensus       100 ~~g---~id~li~nAg~  113 (269)
T 3gk3_A          100 DFG---KVDVLINNAGI  113 (269)
T ss_dssp             HHS---CCSEEEECCCC
T ss_pred             HcC---CCCEEEECCCc
Confidence            333   49999999984

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.70  E-value=0.0053  Score=54.36  Aligned_cols=96  Identities=19%  Similarity=0.170  Sum_probs=62.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...++.+...  |.+|++++|...    +...+...+... +..+-.+.+.+.+...+   +|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~----~~~~l~~~~~~~-~~~D~~d~~~l~~~~~~---~d~vi~~   73 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE----KASTLADQGVEV-RHGDYNQPESLQKAFAG---VSKLLFI   73 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTT----TTHHHHHTTCEE-EECCTTCHHHHHHHTTT---CSEEEEC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHH----HHhHHhhcCCeE-EEeccCCHHHHHHHHhc---CCEEEEc
Confidence            6999999999999999888877  899999997532    222333344443 33333344566666553   9999999


Q ss_pred             CCCcc-----H---HHHHHhcccC--CEEEEEecCC
Q 017064          269 VGGNS-----A---SKVLKFLSQG--GTMVTYGGMS  294 (378)
Q Consensus       269 ~g~~~-----~---~~~~~~l~~~--G~~v~~g~~~  294 (378)
                      ++...     .   ...++.++..  +++|+++...
T Consensus        74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            98521     1   2344444433  4899988543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.70  E-value=0.0041  Score=54.59  Aligned_cols=84  Identities=18%  Similarity=0.167  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHH-hCCCcEEE-ccCccc---HHH-HHHHhcC
Q 017064          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLK-GLGADEVF-TESQLE---VKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~-~~ga~~vi-~~~~~~---~~~-i~~~~~~  258 (378)
                      .|+++||+|++  +++|...++.+...|++|+++.+..... ++..+.+. ..+....+ ..+-.+   ++. +.+....
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            46899999998  8999999988888999999887654322 23333332 34544332 112122   221 2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|.+|++|+++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3359999999984

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.69  E-value=0.0033  Score=57.13  Aligned_cols=85  Identities=12%  Similarity=0.099  Sum_probs=50.6

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .-.++.+|||+|++|.+|...++.+...|.+|+++++..... .++.+.+. .-+. .++..+-.+.+.+.+...+.+ +
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~-~   87 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDI-QYEDGDMADACSVQRAVIKAQ-P   87 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGE-EEEECCTTCHHHHHHHHHHHC-C
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCce-EEEECCCCCHHHHHHHHHHcC-C
Confidence            346789999999999999999998888899999998753211 11222110 1112 223233233344554443323 8


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||.+++.
T Consensus        88 d~Vih~A~~   96 (335)
T 1rpn_A           88 QEVYNLAAQ   96 (335)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECccc
Confidence            999999985

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.69  E-value=0.0064  Score=53.49  Aligned_cols=97  Identities=15%  Similarity=0.107  Sum_probs=69.0

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++..+...|....---.|++++|.|.++.+|..+++++...|++|+++-+.   +                    
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~---T--------------------  195 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF---T--------------------  195 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT---C--------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---C--------------------
Confidence            34566666666666664434579999999997779999999999999998766421   1                    


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .   .+.+.+.   .+|+||.++|.+.+ ---+++++|..++.+|..
T Consensus       196 ~---~L~~~~~---~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          196 R---DLADHVS---RADLVVVAAGKPGL-VKGEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             S---CHHHHHH---TCSEEEECCCCTTC-BCGGGSCTTCEEEECCSC
T ss_pred             c---CHHHHhc---cCCEEEECCCCCCC-CCHHHcCCCeEEEEeccc
Confidence            1   1223333   39999999998644 122678999999999844

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.68  E-value=0.013  Score=51.02  Aligned_cols=121  Identities=17%  Similarity=0.131  Sum_probs=67.1

Q ss_pred             CceEEcCCCCCHhhhhhccccHHH--HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH
Q 017064          152 SVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA  229 (378)
Q Consensus       152 ~~~~~iP~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~  229 (378)
                      ...+.+++++.+....    ...+  ....+...  +.++++||-.|+ |. |..++.+++ .|++|+++.-    ++..
T Consensus        88 ~~~~~l~p~~~fgtg~----~~tt~~~~~~l~~~--~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi----~~~~  154 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGH----HETTRLALKALARH--LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDI----DPMV  154 (254)
T ss_dssp             SEEEECCCC-----CC----SHHHHHHHHHHHHH--CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEES----CGGG
T ss_pred             ceEEEECCCccccCCC----CHHHHHHHHHHHHh--cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEEC----CHHH
Confidence            4556666666443322    1222  23334332  678999999998 44 777877776 4778777763    3443


Q ss_pred             HHHH----HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          230 KEKL----KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       230 ~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+.+    +..|..  +.....+....  +..+  .+|+|+.+.-..    .+..+.+.|+++|+++..+
T Consensus       155 v~~a~~n~~~~~~~--v~~~~~d~~~~--~~~~--~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          155 LPQAEANAKRNGVR--PRFLEGSLEAA--LPFG--PFDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             HHHHHHHHHHTTCC--CEEEESCHHHH--GGGC--CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCc--EEEEECChhhc--CcCC--CCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            3333    345543  11111122121  2122  499999765332    2367788999999999876

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.67  E-value=0.0065  Score=55.41  Aligned_cols=100  Identities=12%  Similarity=0.144  Sum_probs=62.2

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHh----CC-------------CcEEE
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKG----LG-------------ADEVF  242 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~----~g-------------a~~vi  242 (378)
                      ....+.+|++||-.|+ |. |..+..+++..|  .+|+++.    .+++..+.+++    +|             .-.++
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~  172 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFE----VRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  172 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEE----SSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence            3467899999999998 44 888889999876  5777766    36666555543    11             11222


Q ss_pred             ccCcccHHHHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          243 TESQLEVKNVKGLLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       243 ~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+-...  ...+..+  .+|+|+-....+  .+..+.+.|++||+++...
T Consensus       173 ~~d~~~~--~~~~~~~--~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          173 HKDISGA--TEDIKSL--TFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             ESCTTCC--C---------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             ECChHHc--ccccCCC--CeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            2221110  0111122  499999765543  3588899999999999765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.67  E-value=0.0055  Score=52.90  Aligned_cols=79  Identities=16%  Similarity=0.126  Sum_probs=48.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-------cEEEEecCCCCcHHHHHHH----HhCCCcE-EEccCcccHHHH----
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGI-------HSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQLEVKNV----  252 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~-------~vi~~~~~~~~~~~~~~~~----~~~ga~~-vi~~~~~~~~~i----  252 (378)
                      ++++||+|++|++|...++.+...|+       +|+++.+    +.++.+.+    +..+... .+..+-.+.+.+    
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR----TAADLEKISLECRAEGALTDTITADISDMADVRRLT   77 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES----CHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC----CHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHH
Confidence            56899999999999999988888899       8888875    34433322    2234332 222222222222    


Q ss_pred             HHHhcCCCCCcEEEeCCCC
Q 017064          253 KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~  271 (378)
                      .......+++|++|+++|.
T Consensus        78 ~~~~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCC
T ss_pred             HHHHHhCCCCCEEEEcCCc
Confidence            2222222359999999984

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.66  E-value=0.0056  Score=53.69  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=31.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   61 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS   61 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999999999999999988899999999865

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.66  E-value=0.0098  Score=55.82  Aligned_cols=88  Identities=17%  Similarity=0.122  Sum_probs=54.5

Q ss_pred             hccCCCCEEEEeCCCchHHHH--HHHHHHHcCCcEEEEecCCCCc------------HHHHHHHHhCCCcEE-EccCccc
Q 017064          184 TTLNSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGS------------DEAKEKLKGLGADEV-FTESQLE  248 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~--av~la~~~g~~vi~~~~~~~~~------------~~~~~~~~~~ga~~v-i~~~~~~  248 (378)
                      .....|+++||+|+++++|.+  .+......|++|+++.+.....            +...+.++..|.... +..+-.+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445778999999999999998  4444445599999988754322            222334456665543 2222222


Q ss_pred             ---HHH-HHHHhcCCCCCcEEEeCCCC
Q 017064          249 ---VKN-VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       249 ---~~~-i~~~~~~~g~~Dvvid~~g~  271 (378)
                         ++. +.......|++|++|+++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence               222 33333344569999999886

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.65  E-value=0.0081  Score=52.21  Aligned_cols=75  Identities=16%  Similarity=0.077  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH----HHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV----KGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i----~~~~~~~g~~D  263 (378)
                      .++++||+|++|++|...++.+...|++|+++.+....        ++.+. ..+..+-.+.+.+    .+.....|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~-~~~~~D~~d~~~~~~~~~~~~~~~g~id   76 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYPF-ATEVMDVADAAQVAQVCQRLLAETERLD   76 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCSS-EEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCCc-eEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999998865321        22342 2232222222222    22222233599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        77 ~lv~~Ag~   84 (250)
T 2fwm_X           77 ALVNAAGI   84 (250)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.64  E-value=0.0085  Score=56.99  Aligned_cols=90  Identities=14%  Similarity=0.109  Sum_probs=67.3

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      --.|.+|+|.|. |.+|..+++.++.+|++|+++.+    +..+...+...|+.. .        .+.+...   ..|+|
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~----~~~~~~~a~~~g~~~-~--------~l~ell~---~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEI----DPICAIQAVMEGFNV-V--------TLDEIVD---KGDFF  316 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS----CHHHHHHHHTTTCEE-C--------CHHHHTT---TCSEE
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeC----ChhhHHHHHHcCCEe-c--------CHHHHHh---cCCEE
Confidence            356899999998 99999999999999999998873    454433445666632 1        2333333   39999


Q ss_pred             EeCCCCccH--HHHHHhcccCCEEEEEec
Q 017064          266 FNCVGGNSA--SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       266 id~~g~~~~--~~~~~~l~~~G~~v~~g~  292 (378)
                      +-+++...+  ...+..|+++..++.++.
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgr  345 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGH  345 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCC
Confidence            999876443  578899999999999984

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.64  E-value=0.0054  Score=54.98  Aligned_cols=103  Identities=11%  Similarity=0.035  Sum_probs=67.6

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHH
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.....++++++||-.|+ | .|..+..+++..|++|+++.    .+++..+.++    ..|...-+.....+...   
T Consensus        63 ~~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---  133 (302)
T 3hem_A           63 LALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLT----LSENQYAHDKAMFDEVDSPRRKEVRIQGWEE---  133 (302)
T ss_dssp             HHHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEE----CCHHHHHHHHHHHHHSCCSSCEEEEECCGGG---
T ss_pred             HHHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEECCHHH---
Confidence            3445567899999999998 4 58999999999899988887    4666665554    34533111111111112   


Q ss_pred             HhcCCCCCcEEEeCCCC----------------ccHHHHHHhcccCCEEEEEecC
Q 017064          255 LLANLPEPALGFNCVGG----------------NSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      + .+  .+|+|+....-                ..+..+.+.|+|||+++.....
T Consensus       134 ~-~~--~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          134 F-DE--PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             C-CC--CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             c-CC--CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            2 22  59999975431                2246788999999999887643

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.64  E-value=0.0087  Score=57.15  Aligned_cols=90  Identities=14%  Similarity=0.072  Sum_probs=66.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .-.|.+|+|.|. |.+|..+++.++.+|++|+++.+    +..+.......|+...         .+.+...   ..|+|
T Consensus       274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~----~~~~~~~a~~~G~~~~---------~l~ell~---~aDiV  336 (494)
T 3d64_A          274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEI----DPICALQAAMEGYRVV---------TMEYAAD---KADIF  336 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECS----CHHHHHHHHTTTCEEC---------CHHHHTT---TCSEE
T ss_pred             ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeC----ChHhHHHHHHcCCEeC---------CHHHHHh---cCCEE
Confidence            356899999998 99999999999999999998873    4444323445565421         2333443   39999


Q ss_pred             EeCCCCcc-H-HHHHHhcccCCEEEEEec
Q 017064          266 FNCVGGNS-A-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       266 id~~g~~~-~-~~~~~~l~~~G~~v~~g~  292 (378)
                      +.+++... + ...+..|+++..++.++.
T Consensus       337 i~~~~t~~lI~~~~l~~MK~gAilINvgr  365 (494)
T 3d64_A          337 VTATGNYHVINHDHMKAMRHNAIVCNIGH  365 (494)
T ss_dssp             EECSSSSCSBCHHHHHHCCTTEEEEECSS
T ss_pred             EECCCcccccCHHHHhhCCCCcEEEEcCC
Confidence            99987543 3 678899999999999884

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.64  E-value=0.0061  Score=55.03  Aligned_cols=102  Identities=11%  Similarity=0.131  Sum_probs=66.2

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHH
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.....+.++++||-.|+ |. |..+..+++..|++|+++.    .+++..+.+++    .|...-+.....+...+  
T Consensus        81 ~~~~~~~~~~~~~vLDiGc-G~-G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--  152 (318)
T 2fk8_A           81 LNLDKLDLKPGMTLLDIGC-GW-GTTMRRAVERFDVNVIGLT----LSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--  152 (318)
T ss_dssp             HHHTTSCCCTTCEEEEESC-TT-SHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--
T ss_pred             HHHHhcCCCCcCEEEEEcc-cc-hHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEECChHHC--
Confidence            3444466789999999998 44 8889999988899988887    46666666543    34321111111111111  


Q ss_pred             HhcCCCCCcEEEeC-----CCCc----cHHHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNC-----VGGN----SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~-----~g~~----~~~~~~~~l~~~G~~v~~g~  292 (378)
                        .  +.+|+|+..     .+.+    .+..+.+.|+|||+++....
T Consensus       153 --~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 --A--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             --C--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             --C--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence              1  259999976     3322    23677899999999987663

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.64  E-value=0.0027  Score=53.37  Aligned_cols=98  Identities=15%  Similarity=0.100  Sum_probs=64.5

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHh----CCCc--EEEccCcccHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG----LGAD--EVFTESQLEVKNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~i~~  254 (378)
                      ....+.++++||-.|+ | .|..+..+++.. +.+++++.    .+++..+.+++    .|.+  .++..+..      .
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------~  101 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALE----RNPQYLGFIRDNLKKFVARNVTLVEAFAP------E  101 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEE----CCHHHHHHHHHHHHHHTCTTEEEEECCTT------T
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCcEEEEeCChh------h
Confidence            3467889999999998 4 488999999886 36777776    46666666543    3432  22222211      1


Q ss_pred             HhcCCCCCcEEEeCCCC----ccHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGG----NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~g  291 (378)
                      .....+.+|+|+.....    ..+..+.+.|+++|+++...
T Consensus       102 ~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          102 GLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             TCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             hhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            11111249999987653    23477889999999998764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.64  E-value=0.0065  Score=60.08  Aligned_cols=84  Identities=13%  Similarity=0.084  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC---------CCcHHHHHHHHhCCCcEEEccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR---------AGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~---------~~~~~~~~~~~~~ga~~vi~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|++..+..         ...++-.+.++..|...+.|..+. +.+. +.+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            468999999999999999999999999998875421         001111233444565555554442 2222 22222


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...|.+|++|+++|.
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            222359999999984

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.64  E-value=0.012  Score=52.51  Aligned_cols=97  Identities=16%  Similarity=0.120  Sum_probs=62.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      ..+|||+|++|.+|...++.+...| .+|++++|...  ..+...+...|+..+ ..+-.+.+.+.+...+   +|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~--~~~~~~l~~~~~~~~-~~D~~d~~~l~~~~~~---~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR--KKAAKELRLQGAEVV-QGDQDDQVIMELALNG---AYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT--SHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC--CHHHHHHHHCCCEEE-EecCCCHHHHHHHHhc---CCEEEE
Confidence            4689999999999999998888778 89999997532  222233344565443 3333344566666654   999999


Q ss_pred             CCCCcc----------HHHHHHhccc--CCEEEEEe
Q 017064          268 CVGGNS----------ASKVLKFLSQ--GGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~----------~~~~~~~l~~--~G~~v~~g  291 (378)
                      +++...          ....++.++.  -+++|+.+
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S  114 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSG  114 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence            987411          1233444433  35888755

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.63  E-value=0.0033  Score=55.34  Aligned_cols=72  Identities=11%  Similarity=0.005  Sum_probs=50.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +++|||+|++|++|...++.+...|++|+++.+......       ..+ ..++..+-.+.+.+.+...+   +|+||++
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~-~~~~~~Dl~d~~~~~~~~~~---~D~vi~~   71 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPN-EECVQCDLADANAVNAMVAG---CDGIVHL   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTT-EEEEECCTTCHHHHHHHHTT---CSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCC-CEEEEcCCCCHHHHHHHHcC---CCEEEEC
Confidence            468999999999999999988888999999886532111       111 22333333345566666653   9999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        72 Ag~   74 (267)
T 3rft_A           72 GGI   74 (267)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            985

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.63  E-value=0.0072  Score=53.59  Aligned_cols=98  Identities=12%  Similarity=0.151  Sum_probs=67.9

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..+...|.+..---.|.+++|.|.++.+|..+++++...|++|+++-+.   +.                    
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~---T~--------------------  200 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG---TS--------------------  200 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---SC--------------------
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---CC--------------------
Confidence            4566666666666664444679999999996779999999999999998766521   11                    


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +.+ +.+.+.   .+|+||.++|.+.+ ---+++++|..++.+|..
T Consensus       201 ~l~-l~~~~~---~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          201 TED-MIDYLR---TADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHH-HHHHHH---TCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             Cch-hhhhhc---cCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence            011 112333   39999999998643 112568999999998843

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.63  E-value=0.0096  Score=57.61  Aligned_cols=85  Identities=19%  Similarity=0.302  Sum_probs=56.3

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCC---CcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHhcCCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRA---GSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLANLP  260 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~---~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~~~~g  260 (378)
                      ++++.++||+|++|++|...+..+...|++ ++.+.+...   ...+..+.++..|....+ ..+-.+.+.+.+...+ +
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-~  334 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-Y  334 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-S
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-C
Confidence            578899999999999999999888888995 776766421   112333445566755332 2333344445544433 3


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      .+|+||+++|.
T Consensus       335 ~ld~VVh~AGv  345 (511)
T 2z5l_A          335 PPNAVFHTAGI  345 (511)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCcc
Confidence            59999999984

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.62  E-value=0.0055  Score=53.91  Aligned_cols=96  Identities=17%  Similarity=0.182  Sum_probs=67.4

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..+...+....---.|++++|.|.++.+|..+++++...|++|+++-+.   +                    .
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~---t--------------------~  195 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---T--------------------K  195 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---C--------------------S
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---c--------------------h
Confidence            3555555566666654444579999999997779999999999999997765421   0                    1


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         .+.+.+.   .+|+||.++|.+.+ ---+++++|-.++.+|..
T Consensus       196 ---~L~~~~~---~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          196 ---DLSLYTR---QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             ---CHHHHHT---TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCE
T ss_pred             ---hHHHHhh---cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccC
Confidence               1233333   39999999998644 122678899888888843

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.61  E-value=0.0024  Score=54.04  Aligned_cols=98  Identities=19%  Similarity=0.225  Sum_probs=65.3

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHh----CCCcE--EEccCcccHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKG----LGADE--VFTESQLEVKNVK  253 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~i~  253 (378)
                      +...+.++++||..|+ | .|..+..+++..|  .+++++.    .+++..+.+++    .|.+.  ++..+..   .  
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~---~--  139 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIE----RIPELAEKAERTLRKLGYDNVIVIVGDGT---L--  139 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHHHHTCTTEEEEESCGG---G--
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCeEEEECCcc---c--
Confidence            4467889999999998 4 5999999999886  6777776    46666555543    34322  2222111   0  


Q ss_pred             HHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ..... +.+|+|+.+.+-..+ ..+.+.|+++|+++..-
T Consensus       140 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          140 GYEPL-APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             CCGGG-CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCCCC-CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            01111 249999987765443 78889999999998775

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.61  E-value=0.018  Score=51.67  Aligned_cols=91  Identities=12%  Similarity=0.160  Sum_probs=59.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|||+||+|.+|...++.+...|.+|++++|..    .+.+ +.  +... +..+-. .+.+.+...+   +|+||+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----~~~~-~~--~~~~-~~~Dl~-~~~~~~~~~~---~d~Vih~a   70 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI----GNKA-IN--DYEY-RVSDYT-LEDLINQLND---VDAVVHLA   70 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC----C--------CCEE-EECCCC-HHHHHHHTTT---CSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC----Cccc-CC--ceEE-EEcccc-HHHHHHhhcC---CCEEEEcc
Confidence            5899999999999999999999999999999752    1112 22  3333 323323 4556666553   99999999


Q ss_pred             CCcc--------------HHHHHHhcccC--CEEEEEec
Q 017064          270 GGNS--------------ASKVLKFLSQG--GTMVTYGG  292 (378)
Q Consensus       270 g~~~--------------~~~~~~~l~~~--G~~v~~g~  292 (378)
                      +...              ....++.++..  .++|+++.
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            8521              13344444433  47888884

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.58  E-value=0.0067  Score=55.80  Aligned_cols=81  Identities=14%  Similarity=0.101  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHH--cCCcEEEEecCCCCcHH---------HHHHHHhCCCcEEEccCcccHHHHHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARH--RGIHSINIIRDRAGSDE---------AKEKLKGLGADEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~--~g~~vi~~~~~~~~~~~---------~~~~~~~~ga~~vi~~~~~~~~~i~~~~  256 (378)
                      .+.+|||+||+|.+|...++.+..  .|.+|+++.+.......         +.......+. .++..+-.+.+.+.++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINNPLDLRRLE   87 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTCHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCCHHHHHHhh
Confidence            468999999999999999988887  89999999875321100         0001111222 33333333445555551


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ..  ++|+||+++|.
T Consensus        88 ~~--~~D~vih~A~~  100 (362)
T 3sxp_A           88 KL--HFDYLFHQAAV  100 (362)
T ss_dssp             TS--CCSEEEECCCC
T ss_pred             cc--CCCEEEECCcc
Confidence            12  49999999984

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.58  E-value=0.0075  Score=52.65  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=48.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~i~~~~~~~g~~D  263 (378)
                      .++++||+|+++++|...++.+...|++|+++.+.   .++   ...+++.... +..+-.+   ++.+.+.....|++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999888899999998853   222   2333454332 2222222   222211111123599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (257)
T 3tl3_A           82 IVVNCAGT   89 (257)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCCC
Confidence            99999984

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.55  E-value=0.0072  Score=55.78  Aligned_cols=75  Identities=8%  Similarity=-0.009  Sum_probs=50.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcc-cHHHHHHHhcCCCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvv  265 (378)
                      +.+|||+||+|.+|...++.+... |.+|+++++...    +...+.. .+... +..+-. +.+.+.+...+   +|+|
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~----~~~~~~~~~~v~~-~~~Dl~~d~~~~~~~~~~---~d~V   95 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD----RLGDLVKHERMHF-FEGDITINKEWVEYHVKK---CDVI   95 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT----TTGGGGGSTTEEE-EECCTTTCHHHHHHHHHH---CSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh----hhhhhccCCCeEE-EeCccCCCHHHHHHHhcc---CCEE
Confidence            478999999999999999888877 899999997532    2111222 23333 323323 34455555543   9999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |.+++.
T Consensus        96 ih~A~~  101 (372)
T 3slg_A           96 LPLVAI  101 (372)
T ss_dssp             EECBCC
T ss_pred             EEcCcc
Confidence            999884

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.55  E-value=0.0027  Score=57.68  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|||+||+|.+|...++.+...|.+|+++.+......   +.+..+..-.++..+-.+.+.+.+.....+ +|+||+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~-~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIEGSVTDAGLLERAFDSFK-PTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG---GGSCSCTTEEEEECCTTCHHHHHHHHHHHC-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch---hhhhccCCceEEEeeCCCHHHHHHHHhhcC-CCEEEE
Confidence            4578999999999999999988888999999987432211   111122222233333233344544443112 999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        95 ~A~~   98 (330)
T 2pzm_A           95 SAAA   98 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.54  E-value=0.013  Score=56.44  Aligned_cols=87  Identities=20%  Similarity=0.236  Sum_probs=55.5

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCC---cHHHHHHHHhCCCcEE-EccCcccHHHHHHHhc--
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAG---SDEAKEKLKGLGADEV-FTESQLEVKNVKGLLA--  257 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~---~~~~~~~~~~~ga~~v-i~~~~~~~~~i~~~~~--  257 (378)
                      .++++.++||+|++|++|...++.+...|++ |+.+.|....   ..+..+.++..|.... +..+-.+.+.+.+...  
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999999999999998888778996 7777764321   1222344556676432 2233233333333322  


Q ss_pred             -CCCCCcEEEeCCCC
Q 017064          258 -NLPEPALGFNCVGG  271 (378)
Q Consensus       258 -~~g~~Dvvid~~g~  271 (378)
                       ..+.+|.||+++|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence             22458999999984

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.53  E-value=0.0055  Score=55.90  Aligned_cols=81  Identities=9%  Similarity=0.044  Sum_probs=48.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC---CCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL---GADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~---ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .+.+|||+||+|.+|...++.+...|  .+|++..+..  .......+..+   .--.++..+-.+.+.+.+...+.+ +
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~   99 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT--YSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERD-V   99 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC--TTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHT-C
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc--cccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcC-C
Confidence            45689999999999999999888888  5666665432  11111122222   112233333334445555444333 9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+||++++.
T Consensus       100 d~Vih~A~~  108 (346)
T 4egb_A          100 QVIVNFAAE  108 (346)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999984

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.52  E-value=0.0089  Score=58.05  Aligned_cols=87  Identities=14%  Similarity=0.105  Sum_probs=54.9

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe--cCC-------------CCcHHHHHHHHhCCCcEEE-ccCccc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII--RDR-------------AGSDEAKEKLKGLGADEVF-TESQLE  248 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~--~~~-------------~~~~~~~~~~~~~ga~~vi-~~~~~~  248 (378)
                      .+++++++||+|++|++|...++.+...|+++++++  |..             ...++..+.++..|....+ ..+-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            367889999999999999999988888899855554  431             1123334445556765433 223233


Q ss_pred             HHHHHHHhc---CCCCCcEEEeCCCC
Q 017064          249 VKNVKGLLA---NLPEPALGFNCVGG  271 (378)
Q Consensus       249 ~~~i~~~~~---~~g~~Dvvid~~g~  271 (378)
                      .+.+.++..   ..+.+|.||+++|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            333333322   33569999999984

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.52  E-value=0.0029  Score=52.70  Aligned_cols=97  Identities=16%  Similarity=0.186  Sum_probs=62.6

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHH----hCCC---cEEEccCcccHHHHHH
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGA---DEVFTESQLEVKNVKG  254 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~ga---~~vi~~~~~~~~~i~~  254 (378)
                      ..++++++||-.|+ | .|..+..+++..+  .+++++.    .+++..+.++    ..|.   -.++..+-   ..+..
T Consensus        18 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~   88 (197)
T 3eey_A           18 MFVKEGDTVVDATC-G-NGNDTAFLASLVGENGRVFGFD----IQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNMDK   88 (197)
T ss_dssp             HHCCTTCEEEESCC-T-TSHHHHHHHHHHCTTCEEEEEC----SCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGGGG
T ss_pred             hcCCCCCEEEEcCC-C-CCHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHHhh
Confidence            56789999999998 3 3888889999864  5777665    3566555554    3444   12222221   22222


Q ss_pred             HhcCCCCCcEEEeCCCC----------------ccHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGG----------------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...+  .+|+|+.+.+-                ..+..+.+.|+++|+++...
T Consensus        89 ~~~~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           89 YIDC--PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             TCCS--CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccC--CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            2222  59999966532                23578889999999998775

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.52  E-value=0.0037  Score=54.94  Aligned_cols=94  Identities=12%  Similarity=0.086  Sum_probs=66.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .++++||..|+ |. |..+..+++.. |.+++++.    .+++..+.+++.+.. .++..+...   + .. .. +.+|+
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~d~~~---~-~~-~~-~~fD~  151 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLD----VSKVAIKAAAKRYPQVTFCVASSHR---L-PF-SD-TSMDA  151 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEE----SCHHHHHHHHHHCTTSEEEECCTTS---C-SB-CT-TCEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEe----CCHHHHHHHHHhCCCcEEEEcchhh---C-CC-CC-CceeE
Confidence            67899999998 66 99999999986 77888776    477777777765432 222222111   1 01 11 24999


Q ss_pred             EEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          265 GFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       265 vid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      |+.......+..+.+.|+|||+++....
T Consensus       152 v~~~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          152 IIRIYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             EEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEeCChhhHHHHHHhcCCCcEEEEEEc
Confidence            9976666678999999999999988763

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.51  E-value=0.01  Score=53.97  Aligned_cols=80  Identities=13%  Similarity=0.189  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC----cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA----DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga----~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+++|||+||+|.+|...++.+...|.+|++++|... ..++...+.++..    -.++..+-.+.+.+.+...+   +|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d   79 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT-NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKG---CT   79 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT-CHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTT---CS
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc-hhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcC---CC
Confidence            4679999999999999999888889999998887532 2223333333321    12222222222334444443   99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||.+++.
T Consensus        80 ~Vih~A~~   87 (337)
T 2c29_D           80 GVFHVATP   87 (337)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeccc
Confidence            99998863

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.50  E-value=0.015  Score=52.30  Aligned_cols=75  Identities=11%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+..+|||+||+|.+|...++.+...|.+|+++.+.... .    .   ++.. ++..+-.+.+.+.+...+. ++|+||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~---l~~~-~~~~Dl~d~~~~~~~~~~~-~~d~vi   79 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----L---PNVE-MISLDIMDSQRVKKVISDI-KPDYIF   79 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----C---TTEE-EEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----c---ceee-EEECCCCCHHHHHHHHHhc-CCCEEE
Confidence            456789999999999999999888889999999875321 1    1   2322 2223323334444444332 399999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .+++.
T Consensus        80 h~A~~   84 (321)
T 2pk3_A           80 HLAAK   84 (321)
T ss_dssp             ECCSC
T ss_pred             EcCcc
Confidence            99985

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.50  E-value=0.039  Score=50.54  Aligned_cols=87  Identities=15%  Similarity=0.124  Sum_probs=63.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+    + .+.+.+.+.|+..+     .+.+++   ...   .|+|+-
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~----~-~~~~~~~~~g~~~~-----~~l~el---l~~---aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGR----E-NSKERARADGFAVA-----ESKDAL---FEQ---SDVLSV  221 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----H-HHHHHHHHTTCEEC-----SSHHHH---HHH---CSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECC----C-CCHHHHHhcCceEe-----CCHHHH---Hhh---CCEEEE
Confidence            3789999999 99999999999999999998763    3 23455666776432     122222   222   899998


Q ss_pred             CCCCc-c----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGN-S----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~-~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++... .    + ...+..|+++..+|.++
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            87632 1    1 57788999999999887

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.47  E-value=0.011  Score=53.76  Aligned_cols=80  Identities=10%  Similarity=0.065  Sum_probs=49.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CC-cEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-DEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...++.+...|.+|+++.+......+..+.+..+ +. -.++..+-.+.+.+.+...+.+ +|+||++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~D~vih~   80 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA-IDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTT-CSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccC-CCEEEEC
Confidence            6899999999999999988888999998865322222223333221 21 2233333233344444443323 9999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        81 A~~   83 (338)
T 1udb_A           81 AGL   83 (338)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            985

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.46  E-value=0.015  Score=53.80  Aligned_cols=100  Identities=12%  Similarity=0.021  Sum_probs=62.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+.+|||+||+|.+|...++.+...| .+|+++++......+.   +.....-.++..+-.+.+.+.+...   ++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VPDHPAVRFSETSITDDALLASLQD---EYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SCCCTTEEEECSCTTCHHHHHHCCS---CCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---ccCCCceEEEECCCCCHHHHHHHhh---CCCEEE
Confidence            35789999999999999999888889 9999988653221111   1101111233333334455665554   399999


Q ss_pred             eCCCCccH------------------HHHHHhcccC---CEEEEEecC
Q 017064          267 NCVGGNSA------------------SKVLKFLSQG---GTMVTYGGM  293 (378)
Q Consensus       267 d~~g~~~~------------------~~~~~~l~~~---G~~v~~g~~  293 (378)
                      .+++....                  ...++.+...   +++|+++..
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG  152 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH
Confidence            99985321                  2234444443   589988854

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.45  E-value=0.0041  Score=52.39  Aligned_cols=97  Identities=11%  Similarity=0.069  Sum_probs=64.9

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc--EEEccCcccHHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD--EVFTESQLEVKNVKGL  255 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~--~vi~~~~~~~~~i~~~  255 (378)
                      ....+.++++||-.|+ | .|..+..+++. +.+|+++.    .+++..+.++    ..|..  .++..+..   ..  .
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~--~  138 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVE----RIKGLQWQARRRLKNLDLHNVSTRHGDGW---QG--W  138 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCGG---GC--C
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEe----cCHHHHHHHHHHHHHcCCCceEEEECCcc---cC--C
Confidence            4467889999999998 4 58888888888 78888887    4666665554    34543  22222211   10  1


Q ss_pred             hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ... +.+|+|+.+..-..+ ....+.|++||+++..-
T Consensus       139 ~~~-~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          139 QAR-APFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             GGG-CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             ccC-CCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            111 249999987665443 57889999999998765

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.45  E-value=0.027  Score=51.44  Aligned_cols=92  Identities=15%  Similarity=0.236  Sum_probs=58.6

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-----c------------H
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-----E------------V  249 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-----~------------~  249 (378)
                      -.|++|.|.|. |.+|+.+++.++.+|++|+ +.+.   +.++.+..+++|++.+ +.++.     +            .
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVv-vsD~---~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~  246 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLL-VADT---DTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITT  246 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECS---CHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EEeC---CccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCH
Confidence            46899999998 9999999999999999998 5543   4444555666776544 21110     0            0


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEE
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVT  289 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~  289 (378)
                      +.+..+     +.++|++++..+.. ..+.+.|..+|.++.
T Consensus       247 ~~~~~l-----k~~iVie~AN~p~t~~eA~~~L~~~gIlv~  282 (355)
T 1c1d_A          247 EVARTL-----DCSVVAGAANNVIADEAASDILHARGILYA  282 (355)
T ss_dssp             HHHHHC-----CCSEECCSCTTCBCSHHHHHHHHHTTCEEC
T ss_pred             HHHhhC-----CCCEEEECCCCCCCCHHHHHHHHhCCEEEE
Confidence            112111     25666666666554 355666666665543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.45  E-value=0.0027  Score=53.36  Aligned_cols=142  Identities=13%  Similarity=0.109  Sum_probs=81.1

Q ss_pred             CCCCCEEeeCCCCCccccccee-ccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          127 LAPGDWVIPSPPSSGTWQSYVV-KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~~~~~~-~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      ++.|+.+...+    .|.+|.. .+....+.+++++++..+..-.  .......+..  .+.++++||-.|+ |. |..+
T Consensus         6 ~~~~~~~~~~p----~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~l~~--~~~~~~~vLDiG~-G~-G~~~   75 (205)
T 3grz_A            6 INLSRHLAIVP----EWEDYQPVFKDQEIIRLDPGLAFGTGNHQT--TQLAMLGIER--AMVKPLTVADVGT-GS-GILA   75 (205)
T ss_dssp             EEEETTEEEEE----TTCCCCCSSTTCEEEEESCC-----CCHHH--HHHHHHHHHH--HCSSCCEEEEETC-TT-SHHH
T ss_pred             EEECCcEEEec----cccccccCCCCceeEEecCCcccCCCCCcc--HHHHHHHHHH--hccCCCEEEEECC-CC-CHHH
Confidence            44566555443    4777777 7788899999988766542110  1111222221  2678899999998 43 7777


Q ss_pred             HHHHHHcCC-cEEEEecCCCCcHHHHHHHH----hCCCc--EEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH----
Q 017064          206 IQIARHRGI-HSINIIRDRAGSDEAKEKLK----GLGAD--EVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----  274 (378)
Q Consensus       206 v~la~~~g~-~vi~~~~~~~~~~~~~~~~~----~~ga~--~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~----  274 (378)
                      ..+++. +. +++++.    .+++..+.++    ..+..  .++..+-.      ....  +.+|+|+.+......    
T Consensus        76 ~~l~~~-~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------~~~~--~~fD~i~~~~~~~~~~~~l  142 (205)
T 3grz_A           76 IAAHKL-GAKSVLATD----ISDESMTAAEENAALNGIYDIALQKTSLL------ADVD--GKFDLIVANILAEILLDLI  142 (205)
T ss_dssp             HHHHHT-TCSEEEEEE----SCHHHHHHHHHHHHHTTCCCCEEEESSTT------TTCC--SCEEEEEEESCHHHHHHHG
T ss_pred             HHHHHC-CCCEEEEEE----CCHHHHHHHHHHHHHcCCCceEEEecccc------ccCC--CCceEEEECCcHHHHHHHH
Confidence            777764 55 777665    3566555554    34543  22222211      1112  259999976554332    


Q ss_pred             HHHHHhcccCCEEEEEe
Q 017064          275 SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       275 ~~~~~~l~~~G~~v~~g  291 (378)
                      ..+.+.|+++|+++...
T Consensus       143 ~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A          143 PQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             GGSGGGEEEEEEEEEEE
T ss_pred             HHHHHhcCCCCEEEEEe
Confidence            45667899999998754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.44  E-value=0.0025  Score=58.01  Aligned_cols=80  Identities=19%  Similarity=0.214  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|||+||+|.+|...++.+...|.+|+++.+......+   .+.++.--.++..+-.+.+.+.+...+. .+|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDHPNLTFVEGSIADHALVNQLIGDL-QPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhcCCceEEEEeCCCHHHHHHHHhcc-CCcEEEE
Confidence            35789999999999999999888889999999875322111   1111211222333323334444443322 3999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        96 ~A~~   99 (333)
T 2q1w_A           96 TAAS   99 (333)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9985

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.41  E-value=0.0086  Score=52.21  Aligned_cols=79  Identities=18%  Similarity=0.204  Sum_probs=47.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH-HhCCCcEE-EccCccc---HHH-HHHHhcCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g  260 (378)
                      |+++||+|+++++|...++.+...  |++|+.+.+    ++++.+.+ +++|.... +..+-.+   ++. +.+.....|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR----SEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES----CHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC----CHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999888766655  467777774    44444433 34443332 2222122   221 111111223


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        78 ~id~lvnnAg~   88 (254)
T 3kzv_A           78 KIDSLVANAGV   88 (254)
T ss_dssp             CCCEEEEECCC
T ss_pred             CccEEEECCcc
Confidence            59999999985

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.38  E-value=0.017  Score=55.59  Aligned_cols=86  Identities=20%  Similarity=0.265  Sum_probs=54.1

Q ss_pred             cCCC--CEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCC---CcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHh--
Q 017064          186 LNSG--DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRA---GSDEAKEKLKGLGADEVF-TESQLEVKNVKGLL--  256 (378)
Q Consensus       186 ~~~g--~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~---~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~--  256 (378)
                      ++++  +++||+|++|++|...++.+...|+ +++.+.+...   ...+..+.++..|....+ ..+-.+.+.+.++.  
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  8999999999999999988888899 5665555321   122334555667765443 22323333333332  


Q ss_pred             -cCCCCCcEEEeCCCC
Q 017064          257 -ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 -~~~g~~Dvvid~~g~  271 (378)
                       ...+.+|++|+++|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence             222459999999985

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.35  E-value=0.012  Score=51.90  Aligned_cols=96  Identities=20%  Similarity=0.181  Sum_probs=66.8

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..+...+.....--.|.+++|.|++..+|.-+++++...|++|+++-+.   +                    .
T Consensus       138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---t--------------------~  194 (288)
T 1b0a_A          138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF---T--------------------K  194 (288)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS---C--------------------S
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC---c--------------------h
Confidence            4565555566666554434578999999996678999999999999998876421   1                    1


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                         .+.+.+..   +|+||.++|.+.+ ---+++++|..++.+|..
T Consensus       195 ---~L~~~~~~---ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          195 ---NLRHHVEN---ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             ---CHHHHHHH---CSEEEECSCCTTC-BCTTTSCTTCEEEECCCE
T ss_pred             ---hHHHHhcc---CCEEEECCCCcCc-CCHHHcCCCcEEEEccCC
Confidence               12222322   9999999998754 112457899999998843

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.33  E-value=0.0068  Score=52.90  Aligned_cols=102  Identities=15%  Similarity=0.082  Sum_probs=68.7

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc----EEEccCcccHHHHHH
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQLEVKNVKG  254 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~----~vi~~~~~~~~~i~~  254 (378)
                      .+.....+.++++||-.|+  +.|..+..+++..+++++++.    .+++..+.+++....    .++..+-.   .. .
T Consensus        46 ~~~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~d~~---~~-~  115 (266)
T 3ujc_A           46 KILSDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGID----ICSNIVNMANERVSGNNKIIFEANDIL---TK-E  115 (266)
T ss_dssp             HHTTTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHTCCSCTTEEEEECCTT---TC-C
T ss_pred             HHHHhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHHhhcCCCeEEEECccc---cC-C
Confidence            3334456789999999997  478889999998789998887    578888888765432    12211111   11 1


Q ss_pred             HhcCCCCCcEEEeCCCCcc---------HHHHHHhcccCCEEEEEec
Q 017064          255 LLANLPEPALGFNCVGGNS---------ASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~---------~~~~~~~l~~~G~~v~~g~  292 (378)
                       ... +.+|+|+.+..-..         +..+.+.|+|||+++....
T Consensus       116 -~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          116 -FPE-NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             -CCT-TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCC-CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence             111 25999997654221         3677899999999988763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.33  E-value=0.0068  Score=54.58  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=48.1

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec-CCCCcHHHHHHHHhCCC----cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGA----DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~ga----~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      |++|||+||+|.+|...++.+...|.+|++++| ... ..++...+.++..    -.++..+-.+.+.+.+...+   +|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d   76 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE-RKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEG---CV   76 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTT---CS
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCcc-chhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcC---CC
Confidence            578999999999999999988889999998886 321 1011112222211    11222222233445555543   99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||++++.
T Consensus        77 ~vih~A~~   84 (322)
T 2p4h_X           77 GIFHTASP   84 (322)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcCCc
Confidence            99999863

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.33  E-value=0.0076  Score=53.40  Aligned_cols=96  Identities=13%  Similarity=0.144  Sum_probs=66.6

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~  247 (378)
                      .+||++..+...+....---.|.+++|.|++..+|.-+++++...|++|+++-+.                       . 
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-----------------------t-  199 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK-----------------------T-  199 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-----------------------C-
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC-----------------------c-
Confidence            4555555555555543323568999999996579999999999999998765311                       1 


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                        ..+.+.+..   +|+||.++|.+.+ ---+++++|..+|.+|..
T Consensus       200 --~~L~~~~~~---ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          200 --AHLDEEVNK---GDILVVATGQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             --SSHHHHHTT---CSEEEECCCCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             --ccHHHHhcc---CCEEEECCCCccc-CCHHHcCCCcEEEEccCC
Confidence              123333433   9999999998754 222568899999999854

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.32  E-value=0.0059  Score=51.17  Aligned_cols=75  Identities=20%  Similarity=0.213  Sum_probs=46.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .++||+|++|++|...++.+...  +|+++.+    ++++.+.+ .+++. ..+..+-.+.+.+.+.....+++|++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r----~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGR----RAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECS----CHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEEC----CHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            36899999999999888776655  8888775    44444333 33433 44433333334444433312249999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        74 ag~   76 (207)
T 2yut_A           74 VGK   76 (207)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            984

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.31  E-value=0.0044  Score=53.25  Aligned_cols=100  Identities=16%  Similarity=0.202  Sum_probs=63.4

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVK  253 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i~  253 (378)
                      ......++++||-.|+ | .|..+..+++.. +.+++++.    .+++..+.++    ..|..   .++..+...  .+.
T Consensus        48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~  119 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIE----RDERRYEEAHKHVKALGLESRIELLFGDALQ--LGE  119 (233)
T ss_dssp             HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEEC----CCHHHHHHHHHHHHHTTCTTTEEEECSCGGG--SHH
T ss_pred             HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEECCHHH--HHH
Confidence            3345668899999998 4 788999999987 56777765    4666665554    34542   222222111  122


Q ss_pred             HHhcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064          254 GLLANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~  290 (378)
                      ..... +.+|+|+......    .+..+.+.|++||.++..
T Consensus       120 ~~~~~-~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          120 KLELY-PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             HHTTS-CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             hcccC-CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            22111 2499999766542    236778999999999875

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.29  E-value=0.0092  Score=51.85  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=63.1

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH-HHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN-VKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~-i~~  254 (378)
                      .+..+.++++||-.|+  +.|..+..+|+..  +.+++++.    .+++..+.++    ..|...-+.....+..+ +..
T Consensus        57 ~l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~  130 (248)
T 3tfw_A           57 LLVRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLE----ADAHHAQVARENLQLAGVDQRVTLREGPALQSLES  130 (248)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEE----CCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred             HHHhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh
Confidence            3345667899999997  4588889999887  46777766    4666655554    34543111111122222 222


Q ss_pred             HhcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      . .+.+.||+|+-.....    .+..+.+.|++||.++.-.
T Consensus       131 ~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          131 L-GECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             C-CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             c-CCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            2 2222599999544432    2467889999999987654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.29  E-value=0.034  Score=52.15  Aligned_cols=96  Identities=10%  Similarity=0.143  Sum_probs=70.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|+|.|. |.+|+..++.++..|..|+++.    .++++.+.+++.|...+ ..+..+.+.+.+.  +..++|+||-
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId----~d~~~v~~~~~~g~~vi-~GDat~~~~L~~a--gi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLD----HDPDHIETLRKFGMKVF-YGDATRMDLLESA--GAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEE----CCHHHHHHHHHTTCCCE-ESCTTCHHHHHHT--TTTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEE----CCHHHHHHHHhCCCeEE-EcCCCCHHHHHhc--CCCccCEEEE
Confidence            3567999999 9999999999999999999988    57888888888887644 3444444444443  2224999999


Q ss_pred             CCCCccH----HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                      +++.+..    ....+.+.+..+++...
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            9998654    23445566777776654

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.27  E-value=0.014  Score=52.58  Aligned_cols=86  Identities=16%  Similarity=0.170  Sum_probs=62.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+.    .++ +.+.+.|++..      +.+++.   .   ..|+|+.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~----~~~-~~~~~~g~~~~------~l~ell---~---~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPY----PNE-ERAKEVNGKFV------DLETLL---K---ESDVVTI  202 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS----CCH-HHHHHTTCEEC------CHHHHH---H---HCSEEEE
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCC----CCh-hhHhhcCcccc------CHHHHH---h---hCCEEEE
Confidence            4689999999 999999999999999999887753    222 34566776431      222322   2   2899998


Q ss_pred             CCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++....     + ...+..+++++.++.++
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~a  232 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTS  232 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECC
Confidence            887422     2 46778899999998887

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.26  E-value=0.011  Score=56.21  Aligned_cols=83  Identities=17%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCC-Cc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPE-PA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~-~D  263 (378)
                      +|+++||+|++|++|...++.+...|++|+++.+.. ..++..+...+.+...+ .|-.+. .++. +.+.....++ +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~-~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG-GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc-cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            578999999999999999988888899998887542 12222334445665433 222222 2222 2222222223 99


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus       291 ~lV~nAGv  298 (454)
T 3u0b_A          291 ILVNNAGI  298 (454)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.26  E-value=0.028  Score=52.16  Aligned_cols=82  Identities=9%  Similarity=0.017  Sum_probs=51.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHH-HcCCcEEEEecCCCCc--------HHHH-HHHHhCC------C---cEEEccCcccHH
Q 017064          190 DSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGS--------DEAK-EKLKGLG------A---DEVFTESQLEVK  250 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~~~~~--------~~~~-~~~~~~g------a---~~vi~~~~~~~~  250 (378)
                      -+|||+|++|.+|...++.+. ..|.+|+++.+.....        .+.. +.++++.      .   -.++..+-.+.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            479999999999999998887 8999999988653221        2222 1123331      1   233333333334


Q ss_pred             HHHHHhcCCCCCcEEEeCCCC
Q 017064          251 NVKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~  271 (378)
                      .+.+.....+.+|+||++++.
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~  103 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAF  103 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCc
Confidence            454444322249999999985

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.26  E-value=0.0093  Score=52.29  Aligned_cols=96  Identities=14%  Similarity=0.204  Sum_probs=65.9

Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTES  245 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~  245 (378)
                      .+||++..+...+.+..---.|.+++|.|++..+|..+++++...  |++|++.-+.   +                   
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~---t-------------------  194 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---T-------------------  194 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---C-------------------
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc---h-------------------
Confidence            455555555555655432356899999999556899999999988  8898765421   1                   


Q ss_pred             cccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          246 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                          ..+.+.+..   +|+||.++|.+.+ ---+++++|-.++.+|..
T Consensus       195 ----~~L~~~~~~---ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          195 ----RDLPALTRQ---ADIVVAAVGVAHL-LTADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             ----SCHHHHHTT---CSEEEECSCCTTC-BCGGGSCTTCEEEECCEE
T ss_pred             ----hHHHHHHhh---CCEEEECCCCCcc-cCHHHcCCCcEEEEccCC
Confidence                123333433   9999999998754 223567888888888843

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.25  E-value=0.024  Score=51.02  Aligned_cols=108  Identities=15%  Similarity=0.100  Sum_probs=61.4

Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHH-HHh----CCCc-EEEccCcccH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK-LKG----LGAD-EVFTESQLEV  249 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~----~ga~-~vi~~~~~~~  249 (378)
                      ..+|....---.|+++||+|+ |++|.+++..+...|+ +|+++.|... ..++.+. +.+    .+.. .+++.++  .
T Consensus       142 ~~~L~~~~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~-~~~~a~~la~~~~~~~~~~~~~~~~~~--~  217 (315)
T 3tnl_A          142 MRALKEAGHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDD-FYANAEKTVEKINSKTDCKAQLFDIED--H  217 (315)
T ss_dssp             HHHHHHTTCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSST-THHHHHHHHHHHHHHSSCEEEEEETTC--H
T ss_pred             HHHHHHcCCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCc-hHHHHHHHHHHhhhhcCCceEEeccch--H
Confidence            344544222235789999998 8999999999999999 6777765311 1444332 222    3322 2233322  2


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCccHH------H-HHHhcccCCEEEEEe
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNSAS------K-VLKFLSQGGTMVTYG  291 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~~~------~-~~~~l~~~G~~v~~g  291 (378)
                      +++.+...+   +|+||+|++.....      . ....++++..++.+-
T Consensus       218 ~~l~~~l~~---aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv  263 (315)
T 3tnl_A          218 EQLRKEIAE---SVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVV  263 (315)
T ss_dssp             HHHHHHHHT---CSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred             HHHHhhhcC---CCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence            233333333   99999998732210      1 234566666665554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=96.25  E-value=0.014  Score=53.20  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=49.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCC-CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~-~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|||+|++|.+|...++.+...  |.+|+++.+... ...+....+..-+. .++..+-.+.+.+.+...+   +|+||
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---~d~vi   80 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRV-ELVVGDIADAELVDKLAAK---ADAIV   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSE-EEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCe-EEEECCCCCHHHHHHHhhc---CCEEE
Confidence            47999999999999999888777  889999886421 11111111111122 2232333344566666654   89999


Q ss_pred             eCCCCc
Q 017064          267 NCVGGN  272 (378)
Q Consensus       267 d~~g~~  272 (378)
                      ++++..
T Consensus        81 h~A~~~   86 (348)
T 1oc2_A           81 HYAAES   86 (348)
T ss_dssp             ECCSCC
T ss_pred             ECCccc
Confidence            999853

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.23  E-value=0.013  Score=50.81  Aligned_cols=99  Identities=15%  Similarity=0.136  Sum_probs=66.5

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHh----CCCc---EEEccCcccHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKG----LGAD---EVFTESQLEVK  250 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~  250 (378)
                      +.....+.++++||-.|+ |. |..+..+++..  +.+++++.    .+++..+.+++    .|..   .++..+-   .
T Consensus        85 i~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~  155 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-GS-GALTLFLANIVGPEGRVVSYE----IREDFAKLAWENIKWAGFDDRVTIKLKDI---Y  155 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHTCTTTEEEECSCG---G
T ss_pred             HHHhhCCCCCCEEEEecC-Cc-hHHHHHHHHHhCCCeEEEEEe----cCHHHHHHHHHHHHHcCCCCceEEEECch---h
Confidence            334578899999999998 43 88999999985  46777665    35666655543    3533   2222221   1


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          251 NVKGLLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                         ..... +.+|+|+.....+  .+..+.+.|+++|+++...
T Consensus       156 ---~~~~~-~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          156 ---EGIEE-ENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             ---GCCCC-CSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---hccCC-CCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence               11222 2499999877764  5689999999999998764

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.21  E-value=0.0069  Score=52.26  Aligned_cols=103  Identities=16%  Similarity=0.128  Sum_probs=63.8

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH-HHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN-VKGL  255 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~-i~~~  255 (378)
                      ...+.++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.++    ..|.+.-+.....+..+ +...
T Consensus        55 l~~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~  128 (239)
T 2hnk_A           55 LTKISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCD----VSEEWTNVARKYWKENGLENKIFLKLGSALETLQVL  128 (239)
T ss_dssp             HHHHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred             HHHhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHH
Confidence            345667899999997 3 699999999987  56777776    3566555554    34543211111112212 2222


Q ss_pred             hcC------------C-CCCcEEEeCCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          256 LAN------------L-PEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~------------~-g~~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                      ...            . +.+|+|+...+...    +..+.+.|++||.++...
T Consensus       129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          129 IDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             HHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            111            0 24999998766542    367889999999998653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.18  E-value=0.012  Score=51.84  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|+++||+|+++++|...++.+...|++|+++.+.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   61 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA   61 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57899999999999999999888899999888754

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.18  E-value=0.012  Score=51.04  Aligned_cols=101  Identities=12%  Similarity=-0.002  Sum_probs=66.2

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhC-----CCcEEEccCcccHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGL-----GADEVFTESQLEVKNVK  253 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~-----ga~~vi~~~~~~~~~i~  253 (378)
                      .....+.++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.+++.     |.+.+- ....+..+. 
T Consensus        89 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D----~~~~~~~~a~~~~~~~~g~~~v~-~~~~d~~~~-  160 (258)
T 2pwy_A           89 VTLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYE----ARPHHLAQAERNVRAFWQVENVR-FHLGKLEEA-  160 (258)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHHHHCCCCCEE-EEESCGGGC-
T ss_pred             HHHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHhcCCCCEE-EEECchhhc-
Confidence            34467899999999998 5 489999999986  46777776    466666666542     533221 111111111 


Q ss_pred             HHhcCCCCCcEEEeCCCC--ccHHHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVGG--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      . ... +.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       161 ~-~~~-~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 E-LEE-AAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             C-CCT-TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C-CCC-CCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            0 111 249999987665  34588899999999998875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.16  E-value=0.0099  Score=53.39  Aligned_cols=34  Identities=15%  Similarity=0.290  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.+|||+|++|.+|...++.+...|.+|+++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   35 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFR   35 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccC
Confidence            4689999999999999999888889999998853

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.13  E-value=0.011  Score=54.51  Aligned_cols=81  Identities=14%  Similarity=0.168  Sum_probs=45.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHh-C---CCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKG-L---GAD-EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~-~---ga~-~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+|||+|++|.+|...++.+...|.+|+++.+..... .++.+.+.+ .   +.. .++..+-.+.+.+.+...+.+ +|
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d   80 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ-PD   80 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC-CS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC-CC
Confidence            5799999999999999998888899999988642110 011111110 0   111 222222223344444443323 89


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||+++|.
T Consensus        81 ~vih~A~~   88 (372)
T 1db3_A           81 EVYNLGAM   88 (372)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999884

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=96.13  E-value=0.018  Score=52.66  Aligned_cols=80  Identities=10%  Similarity=0.159  Sum_probs=47.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCC-CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~-~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...++.+... |.+|+++.+... ...++...+...+--.++..+-.+.+.+.+..... ++|+||++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~   80 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-CCCEEEEC
Confidence            5899999999999998877766 789999886421 11111111111111122333333334455444311 39999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        81 A~~   83 (361)
T 1kew_A           81 AAE   83 (361)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            985

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.11  E-value=0.0086  Score=49.23  Aligned_cols=96  Identities=17%  Similarity=0.156  Sum_probs=62.1

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc--EEEccCcccHHHHHHHhc
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD--EVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~--~vi~~~~~~~~~i~~~~~  257 (378)
                      ..+++|++||=.|+  +.|..+..+++. +.+|+++.    .+++..+.++    ..|.+  .++. .  +...+....+
T Consensus        18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD----~s~~~l~~a~~~~~~~~~~~v~~~~-~--~~~~l~~~~~   87 (185)
T 3mti_A           18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFD----VQEQALGKTSQRLSDLGIENTELIL-D--GHENLDHYVR   87 (185)
T ss_dssp             TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEE----SCHHHHHHHHHHHHHHTCCCEEEEE-S--CGGGGGGTCC
T ss_pred             HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEe-C--cHHHHHhhcc
Confidence            56789999999987  458888888887 88988887    4666655554    34432  2222 1  1122222222


Q ss_pred             CCCCCcEEEeCCCC----------------ccHHHHHHhcccCCEEEEEe
Q 017064          258 NLPEPALGFNCVGG----------------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       258 ~~g~~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +  .||+|+.+.+.                ..+..+.+.|+|||+++.+.
T Consensus        88 ~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  135 (185)
T 3mti_A           88 E--PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI  135 (185)
T ss_dssp             S--CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             C--CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence            2  49999866432                11266779999999998875

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.10  E-value=0.056  Score=41.77  Aligned_cols=93  Identities=13%  Similarity=0.136  Sum_probs=57.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +.+|+|.|+ |.+|...++.+...|.+|+++.+    ++++.+.+. .+|...+ ..+..+.+.+.+..-  .++|+||.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~----~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~--~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI----DKDICKKASAEIDALVI-NGDCTKIKTLEDAGI--EDADMYIA   75 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHCSSEEE-ESCTTSHHHHHHTTT--TTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC----CHHHHHHHHHhcCcEEE-EcCCCCHHHHHHcCc--ccCCEEEE
Confidence            357999998 99999999998888999888773    566665554 4565433 222222233333211  14999999


Q ss_pred             CCCCccHH----HHHHhcccCCEEEEE
Q 017064          268 CVGGNSAS----KVLKFLSQGGTMVTY  290 (378)
Q Consensus       268 ~~g~~~~~----~~~~~l~~~G~~v~~  290 (378)
                      +++.+...    ...+.+.+ ++++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           76 VTGKEEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             eeCCchHHHHHHHHHHHcCC-CEEEEE
Confidence            99876432    23344444 355543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.10  E-value=0.013  Score=50.43  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=30.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++||+|++|++|...++.+...|++|+++.+.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   35 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   35 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccC
Confidence            5789999999999999998888889999998864

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.08  E-value=0.07  Score=45.23  Aligned_cols=98  Identities=9%  Similarity=0.023  Sum_probs=63.0

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcC------CcEEEEecCCCCcHHHHHHHHh----CC-----C--cEEEccCcc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG------IHSINIIRDRAGSDEAKEKLKG----LG-----A--DEVFTESQL  247 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g------~~vi~~~~~~~~~~~~~~~~~~----~g-----a--~~vi~~~~~  247 (378)
                      .++++++||-.|+ |. |..+..+++..+      .+++++.    .+++..+.+++    .|     .  -.++..+..
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~  150 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLE----RVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY  150 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEE----SCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEe----CCHHHHHHHHHHHHHcCccccccCCEEEEECChH
Confidence            5789999999998 44 888999999876      5777776    46666555543    33     1  222222211


Q ss_pred             c-HHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEe
Q 017064          248 E-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       248 ~-~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g  291 (378)
                      . ..... ...+  .+|+|+...... ....+.+.|+++|+++..-
T Consensus       151 ~~~~~~~-~~~~--~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          151 QVNEEEK-KELG--LFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             GCCHHHH-HHHC--CEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             hcccccC-ccCC--CcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            1 00000 1112  499999776653 4488899999999998775

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.08  E-value=0.017  Score=52.52  Aligned_cols=87  Identities=10%  Similarity=0.067  Sum_probs=63.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|.|. |.+|...++.++.+|++|++..+.    .++ +.+.+.|++..      +   +.++..   ..|+|+.
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~----~~~-~~~~~~g~~~~------~---l~ell~---~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPI----ISP-EVSASFGVQQL------P---LEEIWP---LCDFITV  225 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS----SCH-HHHHHTTCEEC------C---HHHHGG---GCSEEEE
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCC----cch-hhhhhcCceeC------C---HHHHHh---cCCEEEE
Confidence            4789999999 999999999999999999887643    112 24556776431      2   223333   2899998


Q ss_pred             CCCCcc-----H-HHHHHhcccCCEEEEEec
Q 017064          268 CVGGNS-----A-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       268 ~~g~~~-----~-~~~~~~l~~~G~~v~~g~  292 (378)
                      ++....     + ...+..|++++.+|.++.
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            887532     2 567889999999888873

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.07  E-value=0.014  Score=51.65  Aligned_cols=36  Identities=17%  Similarity=0.171  Sum_probs=30.1

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      -.+..+|||+|++|.+|...++.+...|.+|+++.|
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   44 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDV   44 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccC
Confidence            356689999999999999999988888999998875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.02  E-value=0.072  Score=47.53  Aligned_cols=91  Identities=16%  Similarity=0.043  Sum_probs=60.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHH-HHHHhCCCc--EEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|    +.++. ++++.++..  .+++     .+.+.+...   .+|
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR----~~~ka~~la~~~~~~~~~~~~-----~~~~~~~~~---~aD  206 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANR----TVEKAERLVREGDERRSAYFS-----LAEAETRLA---EYD  206 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECS----SHHHHHHHHHHSCSSSCCEEC-----HHHHHHTGG---GCS
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHhhhccCceee-----HHHHHhhhc---cCC
Confidence            5789999999 9999999999999998 6666654    45554 455566652  2221     223444333   399


Q ss_pred             EEEeCCCCccHH------HHHHhcccCCEEEEEe
Q 017064          264 LGFNCVGGNSAS------KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       264 vvid~~g~~~~~------~~~~~l~~~G~~v~~g  291 (378)
                      +||+|++.....      -....++++..++.+.
T Consensus       207 ivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          207 IIINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             EEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            999999864421      1124577777777775

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.01  E-value=0.031  Score=51.43  Aligned_cols=86  Identities=15%  Similarity=0.113  Sum_probs=55.3

Q ss_pred             CCCCEEEEeCCCchHHHHHH-HHHHHcCCcEEEEecCCCCcHH------------HHHHHHhCCCcEE-EccCccc---H
Q 017064          187 NSGDSIVQNGATSIVGQCII-QIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADEV-FTESQLE---V  249 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av-~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~ga~~v-i~~~~~~---~  249 (378)
                      ..++++||+|+++++|+++. .+|...|+.++++.+..+..++            -.+.+++.|...+ ++.+-.+   .
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            45799999999999999755 4555779999998865432221            1234556665544 4444332   2


Q ss_pred             HH-HHHHhcCCCCCcEEEeCCCCc
Q 017064          250 KN-VKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       250 ~~-i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      ++ +..+....|++|+++.+.+.+
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            21 333333445799999999864

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=96.00  E-value=0.021  Score=54.71  Aligned_cols=102  Identities=13%  Similarity=0.167  Sum_probs=62.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc---CCcEEEEecCCCCcHHHHHHHHh-C----------------CCcEEEccCc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHR---GIHSINIIRDRAGSDEAKEKLKG-L----------------GADEVFTESQ  246 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~---g~~vi~~~~~~~~~~~~~~~~~~-~----------------ga~~vi~~~~  246 (378)
                      ..+.+|||+|++|.+|...++.+...   |.+|++++|... ..+..+.+++ +                .-..++..+-
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES-DEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS-HHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC-cHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            45789999999999999998777776   899999998642 2222222221 1                1122222221


Q ss_pred             c------cHHHHHHHhcCCCCCcEEEeCCCCc-------cH-------HHHHHhcccC--CEEEEEec
Q 017064          247 L------EVKNVKGLLANLPEPALGFNCVGGN-------SA-------SKVLKFLSQG--GTMVTYGG  292 (378)
Q Consensus       247 ~------~~~~i~~~~~~~g~~Dvvid~~g~~-------~~-------~~~~~~l~~~--G~~v~~g~  292 (378)
                      .      +.+.+.+...+   +|+||++++..       .+       ...++.+...  .++|+++.
T Consensus       150 ~~~~~gld~~~~~~~~~~---~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS  214 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAET---VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST  214 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHH---CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred             CCcccCCCHHHHHHHHcC---CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence            1      33455555553   99999999852       11       2344444444  38888885

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=95.99  E-value=0.022  Score=57.36  Aligned_cols=82  Identities=7%  Similarity=0.056  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH---hCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~---~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .+.+|||+||+|.+|...++.+...|.+|+++.+......+..+.++   ..+...+ ..+-.+.+.+.+.....+ +|+
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v-~~Dl~d~~~l~~~~~~~~-~D~   87 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY-EVDLCDRKGLEKVFKEYK-IDS   87 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEE-ECCTTCHHHHHHHHHHSC-CCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEE-EcCCCCHHHHHHHHHhCC-CCE
Confidence            46799999999999999999888889999998875432222222222   2333332 222223344444444223 999


Q ss_pred             EEeCCCC
Q 017064          265 GFNCVGG  271 (378)
Q Consensus       265 vid~~g~  271 (378)
                      ||.+++.
T Consensus        88 Vih~A~~   94 (699)
T 1z45_A           88 VIHFAGL   94 (699)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999985

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.98  E-value=0.016  Score=53.54  Aligned_cols=80  Identities=10%  Similarity=0.145  Sum_probs=48.6

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHH-HhC------CCcEEEccCcccHHHHHHHhcCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKL-KGL------GADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~-~~~------ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .+|||+||+|.+|...++.+...|.+|+++++..... .++.+.+ ...      +. .++..+-.+.+.+.+...+.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~-  106 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALM-KLHYADLTDASSLRRWIDVIK-  106 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCE-EEEECCTTCHHHHHHHHHHHC-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccce-EEEECCCCCHHHHHHHHHhcC-
Confidence            5899999999999999998888899999998753210 0001100 000      22 222223223344444443323 


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|+||.+++.
T Consensus       107 ~d~Vih~A~~  116 (381)
T 1n7h_A          107 PDEVYNLAAQ  116 (381)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECCcc
Confidence            8999999985

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.98  E-value=0.025  Score=48.22  Aligned_cols=99  Identities=18%  Similarity=0.088  Sum_probs=59.6

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCc-EEEccCcccHHHHHHHhc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~-~vi~~~~~~~~~i~~~~~  257 (378)
                      +.+++.+||=.|+  +.|..+..+|++.  +.+++++.    .+++..+.++    ..|.. .-+.....+..+......
T Consensus        53 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~  126 (221)
T 3dr5_A           53 NGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCID----PESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA  126 (221)
T ss_dssp             CCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEEC----SCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC
T ss_pred             CCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc
Confidence            3444559998886  7788999999976  56777765    3566555553    45543 111111112222221111


Q ss_pred             CCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064          258 NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~  290 (378)
                      . +.||+||-.....    .++.+.+.|+|||.++.-
T Consensus       127 ~-~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          127 N-DSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             T-TCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             C-CCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            1 2599999655433    247788999999998863

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.98  E-value=0.14  Score=40.41  Aligned_cols=95  Identities=18%  Similarity=0.107  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH---hCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~---~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .++|+|.|+ |.+|...++.+...|.+|+++.+.   .+++.+.+.   ..|.. ++..+..+.+.+.+..-  .++|.|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i--~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNL---PEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGI--DRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECC---CHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTT--TTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECC---ChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcCh--hhCCEE
Confidence            467999998 999999999999999999988842   244443333   33544 34344444444444311  249999


Q ss_pred             EeCCCCccHH----HHHHhcccCCEEEEE
Q 017064          266 FNCVGGNSAS----KVLKFLSQGGTMVTY  290 (378)
Q Consensus       266 id~~g~~~~~----~~~~~l~~~G~~v~~  290 (378)
                      |-+++.+...    ...+.+.+..+++..
T Consensus        76 i~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           76 LALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9999986543    233444455566554

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.95  E-value=0.01  Score=53.98  Aligned_cols=73  Identities=18%  Similarity=0.135  Sum_probs=48.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+||+|.+|...++.+...|.+|+++++.....    +.+...+... +..+-.+.+.+.+...+   +|+||.+++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~l~~~~~~~-~~~Dl~d~~~~~~~~~~---~d~vih~a~   86 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI----QRLAYLEPEC-RVAEMLDHAGLERALRG---LDGVIFSAG   86 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG----GGGGGGCCEE-EECCTTCHHHHHHHTTT---CSEEEEC--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh----hhhccCCeEE-EEecCCCHHHHHHHHcC---CCEEEECCc
Confidence            799999999999999999888999999998753211    1122224332 33333344556666553   999999998


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.94  E-value=0.04  Score=47.75  Aligned_cols=103  Identities=12%  Similarity=0.094  Sum_probs=61.4

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHH-HHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKN-VKGL  255 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~-i~~~  255 (378)
                      +....++++||-.|+  +.|..++.+|+++  +.+++++.    .+++..+.+    +..|.+.-+.....+..+ +..+
T Consensus        74 l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD----~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l  147 (247)
T 1sui_A           74 LLKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMD----INKENYELGLPVIKKAGVDHKIDFREGPALPVLDEM  147 (247)
T ss_dssp             HHHHTTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEE----SCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred             HHHhhCcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHH
Confidence            344567789999986  6788889999986  57777776    345544444    345642111111112222 2222


Q ss_pred             hcC---CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          256 LAN---LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~---~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...   .+.||+||-.....    .+..+.+.|++||.++.-.
T Consensus       148 ~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          148 IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             HHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             HhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence            100   12599999655432    2467889999999987643

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.93  E-value=0.015  Score=52.60  Aligned_cols=100  Identities=17%  Similarity=0.180  Sum_probs=64.5

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHH----hCCCcE--EEccCcccHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKN  251 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~ga~~--vi~~~~~~~~~  251 (378)
                      +.....++++++||-.|+ |. |..+..+++..+  .+|+++.    .+++..+.++    ..|...  ++..+-   ..
T Consensus        67 l~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~g~~~v~~~~~d~---~~  137 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVERLGIENVIFVCGDG---YY  137 (317)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCG---GG
T ss_pred             HHHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCeEEEECCh---hh
Confidence            334467899999999998 44 888888888754  3587776    4666665554    345432  222211   11


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      .  .... +.+|+|+....-..+ +.+.+.|+|||+++..-
T Consensus       138 ~--~~~~-~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          138 G--VPEF-SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             C--CGGG-CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             c--cccC-CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            0  0111 249999987665433 67889999999988764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.91  E-value=0.021  Score=51.76  Aligned_cols=34  Identities=18%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.+|||+||+|.+|...++.+...|.+|++++|.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~   42 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRD   42 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence            6799999999999999999888899999988875

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.90  E-value=0.23  Score=45.09  Aligned_cols=131  Identities=12%  Similarity=0.153  Sum_probs=78.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHH-H-cCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIAR-H-RGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~-~-~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -+|.|.|+ |.+|...++.++ . .+++++++++.   ++++.+ .++.+|...+++       ...++.... .+|+|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~---~~~~~~~~a~~~g~~~~~~-------~~~~~l~~~-~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACAL---DSNQLEWAKNELGVETTYT-------NYKDMIDTE-NIDAIF   76 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECS---CHHHHHHHHHTTCCSEEES-------CHHHHHTTS-CCSEEE
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecC---CHHHHHHHHHHhCCCcccC-------CHHHHhcCC-CCCEEE
Confidence            47999999 999998888776 4 47788887764   555554 456788765442       123333322 399999


Q ss_pred             eCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccch---hh---h-hc-CceEEEEechhhhccccHHHHHHHHHHHH
Q 017064          267 NCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTS---AF---I-FK-DLSLKGFWLQKWLSSEKATECRNMIDYLL  337 (378)
Q Consensus       267 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (378)
                      .|+.... ...+..+++.|-. |++..    +...+..   .+   . .+ ++.+.-.....         +...++.+.
T Consensus        77 i~tp~~~h~~~~~~al~~G~~-v~~eK----p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r---------~~p~~~~~~  142 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAGLN-VFCEK----PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRR---------YDDSYRYAK  142 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEECS----CCCSCHHHHHHHHHHHHTCTTSCEECCCGGG---------TCHHHHHHH
T ss_pred             EeCChHhHHHHHHHHHHCCCE-EEEcC----CCCCCHHHHHHHHHHHHhCCCCeEEEecccc---------cCHHHHHHH
Confidence            9998754 4667777877644 45542    2222221   12   1 23 45443222111         123466777


Q ss_pred             HHHHcCCcc
Q 017064          338 CLAREGKLK  346 (378)
Q Consensus       338 ~~l~~g~~~  346 (378)
                      +++++|.+-
T Consensus       143 ~~i~~g~iG  151 (346)
T 3cea_A          143 KIVDNGDIG  151 (346)
T ss_dssp             HHHHTTTTC
T ss_pred             HHHHcCCCC
Confidence            888888664

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.89  E-value=0.077  Score=48.70  Aligned_cols=85  Identities=11%  Similarity=0.128  Sum_probs=59.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |++|.|.|. |.+|...++.++.+|++|++..+.    . +.+.+.+.|+..      .+   +.++..   ..|+|+-+
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~----~-~~~~~~~~g~~~------~~---l~ell~---~aDvV~l~  237 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPW----L-PRSMLEENGVEP------AS---LEDVLT---KSDFIFVV  237 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSS----S-CHHHHHHTTCEE------CC---HHHHHH---SCSEEEEC
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCCEEEEECCC----C-CHHHHhhcCeee------CC---HHHHHh---cCCEEEEc
Confidence            789999999 999999999999999999887643    1 223344566542      12   223333   28888877


Q ss_pred             CCCc-c----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGGN-S----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~-~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +... .    + ...+..|++++.+|.++
T Consensus       238 ~Plt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          238 AAVTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             SCSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             CcCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence            6642 1    1 56778888888888877

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=95.89  E-value=0.026  Score=46.68  Aligned_cols=96  Identities=14%  Similarity=0.122  Sum_probs=58.0

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcC----------CcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCccc---H
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG----------IHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLE---V  249 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g----------~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~---~  249 (378)
                      ..++++++||-+|+ |. |..+..+++..|          .+|+++..    ++.+     .+.....+ ..+-..   .
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~----s~~~-----~~~~~~~~~~~d~~~~~~~   86 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDL----LHIF-----PLEGATFLCPADVTDPRTS   86 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECS----SCCC-----CCTTCEEECSCCTTSHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEec----hhcc-----cCCCCeEEEeccCCCHHHH
Confidence            34688999999998 66 999999999887          56666652    2211     01112233 222111   1


Q ss_pred             HHHHHHhcCCCCCcEEEe-----CCCC-------------ccHHHHHHhcccCCEEEEEe
Q 017064          250 KNVKGLLANLPEPALGFN-----CVGG-------------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+....++. .+|+|+.     +++.             ..+..+.+.|++||+++...
T Consensus        87 ~~~~~~~~~~-~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           87 QRILEVLPGR-RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHHHHSGGG-CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHhcCCC-CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            2233333332 3999994     3332             12356789999999998764

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.89  E-value=0.015  Score=53.26  Aligned_cols=88  Identities=20%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+..    ...+.+.+.|+..+        ..+.++...   .|+|+-
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~----~~~~~~~~~g~~~~--------~~l~ell~~---aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQ----MAPELEKETGAKFV--------EDLNEMLPK---CDVIVI  226 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSC----CCHHHHHHHCCEEC--------SCHHHHGGG---CSEEEE
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCc----cCHHHHHhCCCeEc--------CCHHHHHhc---CCEEEE
Confidence            4789999999 9999999999999999988876432    12233444565332        122333332   788887


Q ss_pred             CCCCc-----cH-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGN-----SA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~-----~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++...     .+ ...+..|+++..+|.++
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence            77632     11 56677788877777765

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.88  E-value=0.027  Score=49.58  Aligned_cols=92  Identities=13%  Similarity=0.026  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++++++|+|+ |++|.++++.+...|++|+++.|    +.++. +++++++...-++..+  .+++.+     +.+|++|
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R----~~~~~~~la~~~~~~~~~~~~~--~~~~~~-----~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR----TVSRAEELAKLFAHTGSIQALS--MDELEG-----HEFDLII  185 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----SHHHHHHHHHHTGGGSSEEECC--SGGGTT-----CCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHHHhhccCCeeEec--HHHhcc-----CCCCEEE
Confidence            5789999999 89999999999999988887764    45554 4445555310011111  112211     2499999


Q ss_pred             eCCCCccHHH----HHHhcccCCEEEEEe
Q 017064          267 NCVGGNSASK----VLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~~~~----~~~~l~~~G~~v~~g  291 (378)
                      +|++......    ....++++..++.+.
T Consensus       186 n~t~~~~~~~~~~i~~~~l~~~~~v~D~~  214 (271)
T 1nyt_A          186 NATSSGISGDIPAIPSSLIHPGIYCYDMF  214 (271)
T ss_dssp             ECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             ECCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            9999654310    123456666666654

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.87  E-value=0.017  Score=49.28  Aligned_cols=102  Identities=13%  Similarity=0.146  Sum_probs=62.9

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i  252 (378)
                      ......++++||-.|+  +.|..++.+++..  +.+++++.    .+++..+.++    ..|..   .++..+.  .+.+
T Consensus        63 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~  134 (229)
T 2avd_A           63 NLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCE----VDAQPPELGRPLWRQAEAEHKIDLRLKPA--LETL  134 (229)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEE----SCSHHHHHHHHHHHHTTCTTTEEEEESCH--HHHH
T ss_pred             HHHHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHCCCCCeEEEEEcCH--HHHH
Confidence            3455678899999997  3889999999876  46777666    3455544443    34542   2222221  1222


Q ss_pred             HHHhcCC--CCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANL--PEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~--g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+....  +.+|+|+......    .+..+.+.|++||.++...
T Consensus       135 ~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          135 DELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             HHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            2332210  2499998665433    3578889999999998754

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.85  E-value=0.028  Score=49.72  Aligned_cols=100  Identities=10%  Similarity=0.037  Sum_probs=64.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~  255 (378)
                      +.....+.++++||-.|+  +.|..+..+++..|++|+++.    .+++..+.+++    .|...-+.....+...   +
T Consensus        56 ~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd----~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~  126 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLT----LSKNQANHVQQLVANSENLRSKRVLLAGWEQ---F  126 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTCCCCSCEEEEESCGGG---C
T ss_pred             HHHHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHHHHhcCCCCCeEEEECChhh---C
Confidence            444466789999999997  448888999988899888887    46666665543    3422111111111111   1


Q ss_pred             hcCCCCCcEEEeCC-----CC----ccHHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCV-----GG----NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~-----g~----~~~~~~~~~l~~~G~~v~~g  291 (378)
                       .  +.+|+|+...     +.    ..+..+.+.|+|||+++...
T Consensus       127 -~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 -D--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             -C--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -C--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence             1  2599999652     21    12467889999999998765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=95.81  E-value=0.02  Score=51.84  Aligned_cols=79  Identities=13%  Similarity=0.076  Sum_probs=48.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCC-CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~-~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|||+|++|.+|...++.+...|  .+|+++.+... ...++.+.+.....-.++..+-.+.+.+.+...   ++|+||
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi   80 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR---KVDGVV   80 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH---TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh---CCCEEE
Confidence            479999999999999998887776  89998876421 111111111111111223333333445555553   399999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        81 h~A~~   85 (336)
T 2hun_A           81 HLAAE   85 (336)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.81  E-value=0.015  Score=53.54  Aligned_cols=88  Identities=16%  Similarity=0.163  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|.+|.|.|. |.+|...++.++.+|++ |++..+.    ..+.+.+.+.|+..+     .+.++   +..   ..|+|+
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~----~~~~~~~~~~g~~~~-----~~l~e---ll~---~aDvV~  226 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQ----ALPKDAEEKVGARRV-----ENIEE---LVA---QADIVT  226 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSS----CCCHHHHHHTTEEEC-----SSHHH---HHH---TCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCC----ccchhHHHhcCcEec-----CCHHH---HHh---cCCEEE
Confidence            5789999999 99999999999999998 8877643    212233455664421     11222   222   278888


Q ss_pred             eCCCCc-----cH-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGGN-----SA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~-----~~-~~~~~~l~~~G~~v~~g  291 (378)
                      .++...     .+ ...+..|++++.+|.++
T Consensus       227 l~~P~t~~t~~li~~~~l~~mk~ga~lIn~a  257 (364)
T 2j6i_A          227 VNAPLHAGTKGLINKELLSKFKKGAWLVNTA  257 (364)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             ECCCCChHHHHHhCHHHHhhCCCCCEEEECC
Confidence            877652     12 45677888888777776

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.80  E-value=0.027  Score=46.07  Aligned_cols=100  Identities=18%  Similarity=0.199  Sum_probs=62.2

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCC-cEEEccCcccHHHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGA-DEVFTESQLEVKNVKGL  255 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~i~~~  255 (378)
                      .....+.++++||-.|+ |. |..+..+++.. .+++++.    .+++..+.+++    .|. +.+ .....+...   .
T Consensus        26 ~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D----~~~~~~~~a~~~~~~~~~~~~~-~~~~~d~~~---~   94 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAID----RNPEAISTTEMNLQRHGLGDNV-TLMEGDAPE---A   94 (192)
T ss_dssp             HHHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEE----SCHHHHHHHHHHHHHTTCCTTE-EEEESCHHH---H
T ss_pred             HHhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEE----CCHHHHHHHHHHHHHcCCCcce-EEEecCHHH---h
Confidence            34467889999999998 44 88888888766 7777776    45666555543    443 111 111112112   1


Q ss_pred             hcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ....+.+|+|+......    .+..+.+.|+++|+++...
T Consensus        95 ~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           95 LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            11112499999765422    3467788999999998764

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.78  E-value=0.049  Score=51.69  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=58.0

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +.+|+|+|+ |++|...++.+...|.+|+++.+    +.++.+.+ ..++....+..+-.+.+.+.+...   ++|+||+
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~R----~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~---~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR----TLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVIS   74 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEES----SHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcCEEEEEEC----CHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc---CCcEEEE
Confidence            578999985 99999999888888999777764    45554433 234322222222223344555554   3999999


Q ss_pred             CCCCccH-HHHHHhcccCCEEEEE
Q 017064          268 CVGGNSA-SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~~~G~~v~~  290 (378)
                      |++.... .....++.++-.++..
T Consensus        75 ~a~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           75 LIPYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             CCC--CHHHHHHHHHHHTCEEEES
T ss_pred             CCccccchHHHHHHHhCCCeEEEe
Confidence            9986432 3344566666666544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.72  E-value=0.032  Score=48.47  Aligned_cols=33  Identities=12%  Similarity=0.195  Sum_probs=27.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.+|+|.|+ |++|..+++.+...|...+.++|.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~   63 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   63 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence            378999999 999999999999999966666654

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.69  E-value=0.029  Score=50.54  Aligned_cols=87  Identities=15%  Similarity=0.110  Sum_probs=62.2

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -.|.+|.|.|. |.+|...++.++..|++|++..+.    .++. .+.+.|+...      +.+++.   .   ..|+|+
T Consensus       140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~----~~~~-~~~~~g~~~~------~l~ell---~---~aDvVv  201 (313)
T 2ekl_A          140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDIL----DIRE-KAEKINAKAV------SLEELL---K---NSDVIS  201 (313)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSS----CCHH-HHHHTTCEEC------CHHHHH---H---HCSEEE
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCC----cchh-HHHhcCceec------CHHHHH---h---hCCEEE
Confidence            34789999999 999999999999999999887643    2222 3566776531      222322   2   289999


Q ss_pred             eCCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      .++....     + ...+..+++++.++.++
T Consensus       202 l~~P~~~~t~~li~~~~l~~mk~ga~lIn~a  232 (313)
T 2ekl_A          202 LHVTVSKDAKPIIDYPQFELMKDNVIIVNTS  232 (313)
T ss_dssp             ECCCCCTTSCCSBCHHHHHHSCTTEEEEESS
T ss_pred             EeccCChHHHHhhCHHHHhcCCCCCEEEECC
Confidence            9887422     2 56778899998888876

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.69  E-value=0.022  Score=53.61  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      .++.+|||+||+|.+|...+..+...|++|++++|..
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~  103 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD  103 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCC
Confidence            3456899999999999999988888899999999864

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.69  E-value=0.02  Score=51.40  Aligned_cols=120  Identities=11%  Similarity=0.156  Sum_probs=68.8

Q ss_pred             hhccccHHHHHHHHHHH---------hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          167 ATIIVNPLTALRMLEDF---------TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~---------~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      ..+||++..+...+.+.         ..--.|.+++|.|++..+|..+++++...|++|+++.+..   ....++...++
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~---~~l~~ra~~la  222 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN---IQKFTRGESLK  222 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE---EEEEESCCCSS
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch---HHHHhHHHHHh
Confidence            45565555665555552         2123679999999944679999999999999988764320   00011111222


Q ss_pred             CcE-EE-ccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064          238 ADE-VF-TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       238 a~~-vi-~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      ... .. .....+..++.+.+..   +|+||.++|.+.+----+++++|-.++.+|.
T Consensus       223 ~~~~~~t~~~~t~~~~L~e~l~~---ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi  276 (320)
T 1edz_A          223 LNKHHVEDLGEYSEDLLKKCSLD---SDVVITGVPSENYKFPTEYIKEGAVCINFAC  276 (320)
T ss_dssp             CCCCEEEEEEECCHHHHHHHHHH---CSEEEECCCCTTCCBCTTTSCTTEEEEECSS
T ss_pred             hhcccccccccccHhHHHHHhcc---CCEEEECCCCCcceeCHHHcCCCeEEEEcCC
Confidence            210 00 0000001345555544   9999999998643111244788888888874

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.68  E-value=0.025  Score=48.50  Aligned_cols=102  Identities=20%  Similarity=0.155  Sum_probs=62.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH-HHHHh
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN-VKGLL  256 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~-i~~~~  256 (378)
                      ....++++||-.|+  +.|..+..+++..  +.+++++.    .+++..+.++    ..|...-+.....+..+ +..+.
T Consensus        68 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD----~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~  141 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACD----QDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLT  141 (232)
T ss_dssp             HHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEE----SCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred             HHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence            44557789999997  4899999999987  46777766    4666655554    33542111111112222 33332


Q ss_pred             cCC--CCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          257 ANL--PEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       257 ~~~--g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...  +.||+||-.....    .+..+.+.|++||.++.-.
T Consensus       142 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          142 QGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             TSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             hcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            211  2599999554432    2477889999999998754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.67  E-value=0.022  Score=50.63  Aligned_cols=85  Identities=19%  Similarity=0.150  Sum_probs=53.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+. .|.+|+++.|...                .+..+-.+.+.+.+...+.+ +|+||++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~-~d~vih~a~   63 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLR-PDVIVNAAA   63 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHC-CSEEEECCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcC-CCEEEECcc
Confidence            69999999999999998888 7999999886420                01111122334444433222 999999998


Q ss_pred             Ccc------------------HHHHHHhccc-CCEEEEEecC
Q 017064          271 GNS------------------ASKVLKFLSQ-GGTMVTYGGM  293 (378)
Q Consensus       271 ~~~------------------~~~~~~~l~~-~G~~v~~g~~  293 (378)
                      ...                  ....++.++. +.++|+++..
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  105 (299)
T 1n2s_A           64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD  105 (299)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred             cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence            532                  1233444443 4588888753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.67  E-value=0.034  Score=51.40  Aligned_cols=75  Identities=13%  Similarity=0.050  Sum_probs=50.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +.+|||+|++|.+|...++.+...|.+|++++|......    .....+.. ++..+-.+.+.+.+...   ++|+||++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~v~-~~~~Dl~d~~~~~~~~~---~~d~Vih~  100 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM----TEDMFCDE-FHLVDLRVMENCLKVTE---GVDHVFNL  100 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS----CGGGTCSE-EEECCTTSHHHHHHHHT---TCSEEEEC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch----hhccCCce-EEECCCCCHHHHHHHhC---CCCEEEEC
Confidence            468999999999999999988888999999987532111    01112332 33333334455656554   39999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      ++.
T Consensus       101 A~~  103 (379)
T 2c5a_A          101 AAD  103 (379)
T ss_dssp             CCC
T ss_pred             cee
Confidence            984

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.66  E-value=0.017  Score=49.55  Aligned_cols=98  Identities=14%  Similarity=0.059  Sum_probs=62.8

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhc
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      ..++||++||=.|+  +.|..+..+|+..|.  +|+++.    .+++..+.+++    .+-...+..+......... ..
T Consensus        73 l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD----~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~-~~  145 (233)
T 4df3_A           73 LPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVE----FAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRH-LV  145 (233)
T ss_dssp             CCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEE----CCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTT-TC
T ss_pred             cCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHHhhHhhcCeeEEEEeccCcccccc-cc
Confidence            56899999999997  668889999998875  688776    46666665543    2211222222212111111 11


Q ss_pred             CCCCCcEEEeCCCCc-----cHHHHHHhcccCCEEEEE
Q 017064          258 NLPEPALGFNCVGGN-----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~-----~~~~~~~~l~~~G~~v~~  290 (378)
                        ..+|+|+.....+     .+..+.+.|+|||+++..
T Consensus       146 --~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          146 --EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             --CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             --ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence              2489988655543     236678899999998865

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.65  E-value=0.14  Score=43.15  Aligned_cols=77  Identities=9%  Similarity=0.047  Sum_probs=55.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|+|.|+ |.+|...++.+...|..|+++.    .++++.+.+. ..|.. ++..+..+.+.+.+..-  .++|++|-++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid----~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i--~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIIN----KDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEV--SKNDVVVILT   73 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTC--CTTCEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCc--ccCCEEEEec
Confidence            4899998 9999999999999999999888    4677776654 46654 34444444444544322  2499999999


Q ss_pred             CCccHH
Q 017064          270 GGNSAS  275 (378)
Q Consensus       270 g~~~~~  275 (378)
                      +.+...
T Consensus        74 ~~d~~n   79 (218)
T 3l4b_C           74 PRDEVN   79 (218)
T ss_dssp             SCHHHH
T ss_pred             CCcHHH
Confidence            987653

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.64  E-value=0.043  Score=46.47  Aligned_cols=103  Identities=16%  Similarity=0.163  Sum_probs=63.2

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKN  251 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~  251 (378)
                      ..+....++++||=.|+  +.|..+..+|+..  +.+++++.    .+++..+.++    ..|..   .++..+..  +.
T Consensus        51 ~~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~  122 (223)
T 3duw_A           51 QLLVQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLE----ASEKHADIARSNIERANLNDRVEVRTGLAL--DS  122 (223)
T ss_dssp             HHHHHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCHH--HH
T ss_pred             HHHHHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HH
Confidence            33345567899999987  5788889999887  57877776    3565555543    45542   22222211  12


Q ss_pred             HHHHhcCC-CCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANL-PEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~-g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      +..+.... +.||+||-.....    .+..+.+.|++||.++.-.
T Consensus       123 ~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          123 LQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             HHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             HHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            22222111 2499999655433    2467889999999887653

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.64  E-value=0.0072  Score=52.51  Aligned_cols=99  Identities=20%  Similarity=0.248  Sum_probs=63.6

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i  252 (378)
                      +.....+.++++||-.|+ | .|..+..+++..|++++++.    .+++..+.++    ..|..   .++..+-.   +.
T Consensus        28 l~~~~~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~v~gvD----~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~---~~   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGS-G-SGEMLCTWARDHGITGTGID----MSSLFTAQAKRRAEELGVSERVHFIHNDAA---GY   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETC-T-TCHHHHHHHHHTCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCCT---TC
T ss_pred             HHHhcCCCCCCEEEEECC-C-CCHHHHHHHHhcCCeEEEEe----CCHHHHHHHHHHHHhcCCCcceEEEECChH---hC
Confidence            334467899999999998 3 38888999998899998877    4565555553    34432   22221111   11


Q ss_pred             HHHhcCCCCCcEEEeCCCC-------ccHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGG-------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-------~~~~~~~~~l~~~G~~v~~g  291 (378)
                         ... +.||+|+....-       ..+..+.+.|+|||+++...
T Consensus        99 ---~~~-~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A           99 ---VAN-EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ---CCS-SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ---CcC-CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence               111 249999963321       12467789999999998764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.63  E-value=0.064  Score=51.13  Aligned_cols=94  Identities=15%  Similarity=0.151  Sum_probs=59.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +.+|+|+|+ |++|..++..+... |.+|+++.|    +.++.+.+. ..+... +..+-.+.+.+.+...+   +|+||
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R----~~~ka~~la~~~~~~~-~~~D~~d~~~l~~~l~~---~DvVI   93 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACR----TLANAQALAKPSGSKA-ISLDVTDDSALDKVLAD---NDVVI   93 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEES----SHHHHHHHHGGGTCEE-EECCTTCHHHHHHHHHT---SSEEE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEEC----CHHHHHHHHHhcCCcE-EEEecCCHHHHHHHHcC---CCEEE
Confidence            568999998 99999999888776 678777774    455554443 334332 22222223344444443   99999


Q ss_pred             eCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      +|++.... .....+++++-.++...
T Consensus        94 n~tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             ECCchhhhHHHHHHHHhcCCEEEEee
Confidence            99997543 23445677777776653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.63  E-value=0.047  Score=55.74  Aligned_cols=86  Identities=15%  Similarity=0.260  Sum_probs=54.3

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHH-HcCCc-EEEEecCC---CCcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHh---
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIAR-HRGIH-SINIIRDR---AGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLL---  256 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~-~~g~~-vi~~~~~~---~~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~---  256 (378)
                      +.++.++||+|++|++|...++.+. ..|++ ++.+.|..   +..++..+.++..|....+ ..+-.+.+.+.+..   
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3678999999999999999887765 78996 66666642   1223334555667876443 22222333333322   


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      .....+|++|+++|.
T Consensus       607 ~~~~~id~lVnnAGv  621 (795)
T 3slk_A          607 PDEHPLTAVVHAAGV  621 (795)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCEEEEECCCc
Confidence            111248999999985

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.62  E-value=0.07  Score=49.14  Aligned_cols=91  Identities=13%  Similarity=0.073  Sum_probs=64.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|+|+|+ |.+|..+++.+.. ...|.++.    .+.++.+.+++......+|.  .+.+.+.++..+   .|+||+|++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~----~~~~~~~~~~~~~~~~~~d~--~d~~~l~~~~~~---~DvVi~~~p   86 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGD----VNNENLEKVKEFATPLKVDA--SNFDKLVEVMKE---FELVIGALP   86 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEE----SCHHHHHHHTTTSEEEECCT--TCHHHHHHHHTT---CSEEEECCC
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEE----cCHHHHHHHhccCCcEEEec--CCHHHHHHHHhC---CCEEEEecC
Confidence            6999999 9999998887754 45776665    36777777765543323333  334566676664   999999998


Q ss_pred             CccH-HHHHHhcccCCEEEEEec
Q 017064          271 GNSA-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       271 ~~~~-~~~~~~l~~~G~~v~~g~  292 (378)
                      ...- .-+-.|+..+-.++.+..
T Consensus        87 ~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           87 GFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GGGHHHHHHHHHHHTCEEEECCC
T ss_pred             CcccchHHHHHHhcCcceEeeec
Confidence            7543 456678888999988763

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=95.61  E-value=0.019  Score=50.71  Aligned_cols=31  Identities=10%  Similarity=0.150  Sum_probs=28.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      +|||+|++|.+|...++.+...|.+|++++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK   37 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecc
Confidence            7999999999999999988888999999885

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=95.60  E-value=0.023  Score=52.07  Aligned_cols=77  Identities=12%  Similarity=0.088  Sum_probs=50.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-----CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRG-----IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g-----~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      +.+|||+||+|.+|...++.+...|     .+|+++++......     ....+.. ++..+-.+.+.+.+...+.+.+|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPIN-YVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCE-EEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceE-EEEeecCCHHHHHHHHhcCCCCC
Confidence            3579999999999999998888888     89999987532211     1112222 23233333445655554432399


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||.+++.
T Consensus        75 ~vih~a~~   82 (364)
T 2v6g_A           75 HVFYVTWA   82 (364)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.59  E-value=0.054  Score=46.08  Aligned_cols=95  Identities=15%  Similarity=0.125  Sum_probs=61.8

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcC-------CcEEEEecCCCCcHHHHHHHHh----CC-------CcEEEccCc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG-------IHSINIIRDRAGSDEAKEKLKG----LG-------ADEVFTESQ  246 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g-------~~vi~~~~~~~~~~~~~~~~~~----~g-------a~~vi~~~~  246 (378)
                      .++++++||-.|+ |. |..+..+++..+       .+|+++.    .+++..+.+++    .|       .-.++..+.
T Consensus        81 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-GS-GYLTACFYRYIKAKGVDADTRIVGIE----HQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG  154 (227)
T ss_dssp             TCCTTCEEEEESC-TT-SHHHHHHHHHHHHSCCCTTCEEEEEE----SCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred             hCCCCCEEEEECC-Cc-cHHHHHHHHhcccccCCccCEEEEEE----cCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence            5789999999998 44 888999998776       4777776    35665555542    22       122222221


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      ..     ..... +.+|+|+.+..... .....+.|++||+++..-
T Consensus       155 ~~-----~~~~~-~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          155 RK-----GYPPN-APYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GG-----CCGGG-CSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cc-----CCCcC-CCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            11     11111 24999998777543 478899999999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=95.58  E-value=0.029  Score=50.82  Aligned_cols=78  Identities=6%  Similarity=-0.025  Sum_probs=48.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc---C---CcEEEEecCCC-CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          191 SIVQNGATSIVGQCIIQIARHR---G---IHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~---g---~~vi~~~~~~~-~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      +|||+|++|.+|...++.+...   |   .+|+++.+... ...++...+....--.++..+-.+.+.+.+...   ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d   78 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR---GVD   78 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT---TCC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc---CCC
Confidence            5999999999999999887775   7   89999886421 112221111111111233333334455666553   399


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +||.+++.
T Consensus        79 ~Vih~A~~   86 (337)
T 1r6d_A           79 AIVHFAAE   86 (337)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99999985

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.58  E-value=0.024  Score=51.16  Aligned_cols=76  Identities=12%  Similarity=0.254  Sum_probs=49.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|||+|++|.+|...++.+...|.+|+++.+......+.   +.. +. .++..+-.+.+.+.+..... ++|+||+++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~~-~~~~~D~~~~~~~~~~~~~~-~~d~vih~a   75 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA---ITE-GA-KFYNGDLRDKAFLRDVFTQE-NIEAVMHFA   75 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCT-TS-EEEECCTTCHHHHHHHHHHS-CEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh---cCC-Cc-EEEECCCCCHHHHHHHHhhc-CCCEEEECC
Confidence            3799999999999999999888899999988653222111   111 22 23333323334455544322 399999999


Q ss_pred             CC
Q 017064          270 GG  271 (378)
Q Consensus       270 g~  271 (378)
                      +.
T Consensus        76 ~~   77 (330)
T 2c20_A           76 AD   77 (330)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.57  E-value=0.057  Score=48.46  Aligned_cols=97  Identities=16%  Similarity=0.020  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHH-HHh----CCCc-EEEccCcccHHHHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK-LKG----LGAD-EVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      .++++||+|+ |+.|.+++..+...|+ +++++.|.. ...++.+. +++    .+.. ..++..+  .+.+.+...   
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~-~~~~~a~~la~~~~~~~~~~v~~~~~~~--l~~~~~~l~---  219 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKD-DFFEKAVAFAKRVNENTDCVVTVTDLAD--QHAFTEALA---  219 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS-THHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH---
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCC-chHHHHHHHHHHhhhccCcceEEechHh--hhhhHhhcc---
Confidence            5789999998 9999999999999999 566666531 11344332 222    3332 2222222  111122222   


Q ss_pred             CCcEEEeCCCCccH---HH----HHHhcccCCEEEEEe
Q 017064          261 EPALGFNCVGGNSA---SK----VLKFLSQGGTMVTYG  291 (378)
Q Consensus       261 ~~Dvvid~~g~~~~---~~----~~~~l~~~G~~v~~g  291 (378)
                      .+|+||+|++....   ..    -...++++..++.+-
T Consensus       220 ~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v  257 (312)
T 3t4e_A          220 SADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV  257 (312)
T ss_dssp             HCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred             CceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence            29999999875321   11    124566666665554

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.51  E-value=0.047  Score=48.36  Aligned_cols=103  Identities=15%  Similarity=0.066  Sum_probs=58.0

Q ss_pred             HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHH-HHHhCCC----cEEEccCcccHHH
Q 017064          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKE-KLKGLGA----DEVFTESQLEVKN  251 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~-~~~~~ga----~~vi~~~~~~~~~  251 (378)
                      .+|.....--.+++++|+|+ |++|.+++..+...|+ +++++.|    +.++.+ ++++++.    ..+...+.   ++
T Consensus       116 ~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R----~~~~a~~la~~~~~~~~~~~i~~~~~---~~  187 (283)
T 3jyo_A          116 RGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL----DTSRAQALADVINNAVGREAVVGVDA---RG  187 (283)
T ss_dssp             HHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS----SHHHHHHHHHHHHHHHTSCCEEEECS---TT
T ss_pred             HHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEEC----CHHHHHHHHHHHHhhcCCceEEEcCH---HH
Confidence            34443222345789999999 9999999998888999 4666664    444443 3333321    11111111   12


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccH-----HHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFNCVGGNSA-----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~-----~~~~~~l~~~G~~v~~g  291 (378)
                      +.+...   .+|+||+|++....     .-....++++..++.+-
T Consensus       188 l~~~l~---~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          188 IEDVIA---AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             HHHHHH---HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             HHHHHh---cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence            222222   29999999974221     11235566766665554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=95.51  E-value=0.059  Score=46.98  Aligned_cols=66  Identities=11%  Similarity=0.149  Sum_probs=43.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+.. |.+|+++.+.....         .+  ...|..  +.+.+.+...+.+ +|+||+++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~~--~~~Dl~--~~~~~~~~~~~~~-~d~vi~~a~   66 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------GG--YKLDLT--DFPRLEDFIIKKR-PDVIINAAA   66 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------TC--EECCTT--SHHHHHHHHHHHC-CSEEEECCC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------CC--ceeccC--CHHHHHHHHHhcC-CCEEEECCc
Confidence            589999999999999988774 89999998753210         12  222322  2334444333223 999999998


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        67 ~   67 (273)
T 2ggs_A           67 M   67 (273)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.49  E-value=0.039  Score=49.24  Aligned_cols=74  Identities=12%  Similarity=0.039  Sum_probs=48.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+|||+|++|.+|...++.+...  |.+|+++.+.....    ....  +... +..+-.+.+.+.+.....+ +|+||+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~--~~~~-~~~D~~d~~~~~~~~~~~~-~d~vih   74 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT----DVVN--SGPF-EVVNALDFNQIEHLVEVHK-ITDIYL   74 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC----HHHH--SSCE-EECCTTCHHHHHHHHHHTT-CCEEEE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc----cccC--CCce-EEecCCCHHHHHHHHhhcC-CCEEEE
Confidence            57999999999999999888777  89999998754221    1112  2332 2233233445555444223 999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        75 ~a~~   78 (312)
T 2yy7_A           75 MAAL   78 (312)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9985

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.48  E-value=0.035  Score=47.79  Aligned_cols=102  Identities=16%  Similarity=0.145  Sum_probs=62.1

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i  252 (378)
                      .+....++++||-.|+  +.|..+..+|+++  +.+++++.    .+++..+.++    ..|..   .++..+..  +.+
T Consensus        64 ~l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD----~~~~~~~~a~~~~~~~g~~~~i~~~~gda~--~~l  135 (237)
T 3c3y_A           64 FVLKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAID----FDREAYEIGLPFIRKAGVEHKINFIESDAM--LAL  135 (237)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCHH--HHH
T ss_pred             HHHHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHH
Confidence            3344567789999986  5788888999886  56777666    3566555553    45643   12222211  112


Q ss_pred             HHHhc-C--CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLA-N--LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~-~--~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+.. +  .+.||+||-.....    .++.+.+.|++||.++.-.
T Consensus       136 ~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          136 DNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             HHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence            22211 0  12599999655432    2467889999999987643

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.43  E-value=0.025  Score=48.37  Aligned_cols=98  Identities=14%  Similarity=0.073  Sum_probs=61.1

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCC--c--EEEccCcccHHHHHHHhcC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGA--D--EVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga--~--~vi~~~~~~~~~i~~~~~~  258 (378)
                      ..+.++++||-.|+ |. |..+..+++..| .+|+++.    .+++..+.+++.-.  +  ..+..+......... .. 
T Consensus        70 ~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~-  141 (230)
T 1fbn_A           70 MPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIE----YAPRIMRELLDACAERENIIPILGDANKPQEYAN-IV-  141 (230)
T ss_dssp             CCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEE----SCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TS-
T ss_pred             cCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEE----CCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc-cC-
Confidence            45778999999998 44 888999999876 5777766    46666655543211  1  111111111111001 11 


Q ss_pred             CCCCcEEEeCCCCc-----cHHHHHHhcccCCEEEEE
Q 017064          259 LPEPALGFNCVGGN-----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-----~~~~~~~~l~~~G~~v~~  290 (378)
                       +.+|+|+.....+     .+..+.+.|+|+|+++..
T Consensus       142 -~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          142 -EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence             2499999665544     246788899999999875

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.42  E-value=0.25  Score=45.97  Aligned_cols=108  Identities=18%  Similarity=0.184  Sum_probs=66.0

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHH-----------HhCCC--cE-
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-----------KGLGA--DE-  240 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~-----------~~~ga--~~-  240 (378)
                      .+..+.....+.+|++||=+|+  |.|..++++|+..|++ ++++.    -+++..+.+           +.+|.  +. 
T Consensus       161 ~i~~il~~l~l~~gd~VLDLGC--GtG~l~l~lA~~~g~~kVvGID----iS~~~lelAr~n~e~frkr~~~~Gl~~~rV  234 (438)
T 3uwp_A          161 LVAQMIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVE----KADIPAKYAETMDREFRKWMKWYGKKHAEY  234 (438)
T ss_dssp             HHHHHHHHHCCCTTCEEEEESC--TTSHHHHHHHHHCCCSEEEEEE----CCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred             HHHHHHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            3444556678999999998886  7789999999988986 77776    354433333           22342  22 


Q ss_pred             -EEccCcccHHHHHHHhcCCCCCcEEEeCCC---C---ccHHHHHHhcccCCEEEEEecC
Q 017064          241 -VFTESQLEVKNVKGLLANLPEPALGFNCVG---G---NSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       241 -vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g---~---~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                       ++..+-.... ......   .+|+|+-+.-   .   ..+...++.|+|||++|.....
T Consensus       235 efi~GD~~~lp-~~d~~~---~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f  290 (438)
T 3uwp_A          235 TLERGDFLSEE-WRERIA---NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPF  290 (438)
T ss_dssp             EEEECCTTSHH-HHHHHH---TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred             EEEECcccCCc-cccccC---CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence             2222222211 111122   3999984321   1   1235677899999999987643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.39  E-value=0.026  Score=47.43  Aligned_cols=95  Identities=13%  Similarity=0.004  Sum_probs=63.6

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE--EccCcccHHHHHHHhcCCCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~i~~~~~~~g~  261 (378)
                      ..+.++.+||-.|+  +.|..+..+++. |++++++.    .+++..+.+++.|...+  +..+   ....   ... +.
T Consensus        42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D----~s~~~~~~a~~~~~~~~~~~~~d---~~~~---~~~-~~  107 (218)
T 3ou2_A           42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALD----GSAEMIAEAGRHGLDNVEFRQQD---LFDW---TPD-RQ  107 (218)
T ss_dssp             TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEE----SCHHHHHHHGGGCCTTEEEEECC---TTSC---CCS-SC
T ss_pred             hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEe----CCHHHHHHHHhcCCCCeEEEecc---cccC---CCC-Cc
Confidence            44788899999998  347788888887 88888877    57777788877553221  2111   1111   122 25


Q ss_pred             CcEEEeCCCCc---------cHHHHHHhcccCCEEEEEec
Q 017064          262 PALGFNCVGGN---------SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       262 ~Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~g~  292 (378)
                      +|+|+....-.         .+..+.+.|++||.++....
T Consensus       108 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          108 WDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            99999765421         23677899999999988863

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=95.38  E-value=0.036  Score=48.89  Aligned_cols=93  Identities=12%  Similarity=0.157  Sum_probs=59.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +.+|||+|+ |.+|...++.+...|.+|+++.|.....        ..+...+ ..+-.+.+.+.+...+  ++|+||.+
T Consensus         3 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~-~~Dl~d~~~~~~~~~~--~~d~vih~   70 (286)
T 3gpi_A            3 LSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTL-IADVTRPDTLASIVHL--RPEILVYC   70 (286)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEE-ECCTTCGGGCTTGGGG--CCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceE-EccCCChHHHHHhhcC--CCCEEEEe
Confidence            357999995 9999999999998999999999753211        1233332 2222222334444433  49999999


Q ss_pred             CCCcc-------------HHHHHHhcccC--CEEEEEecC
Q 017064          269 VGGNS-------------ASKVLKFLSQG--GTMVTYGGM  293 (378)
Q Consensus       269 ~g~~~-------------~~~~~~~l~~~--G~~v~~g~~  293 (378)
                      ++...             ....++.++..  +++|+++..
T Consensus        71 a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~  110 (286)
T 3gpi_A           71 VAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST  110 (286)
T ss_dssp             HHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEG
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Confidence            87421             23455555543  589988853

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.37  E-value=0.021  Score=49.21  Aligned_cols=97  Identities=10%  Similarity=0.048  Sum_probs=60.7

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC----CCcEEEccCcccHHHHHHHhcCCCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      ..+|.+||-.|+  |.|..+..+++..+.+++++.    -+++-.+.+++.    +....+.  ..+.+.+...... +.
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id----~~~~~~~~a~~~~~~~~~~~~~~--~~~a~~~~~~~~~-~~  128 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIE----CNDGVFQRLRDWAPRQTHKVIPL--KGLWEDVAPTLPD-GH  128 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEE----CCHHHHHHHHHHGGGCSSEEEEE--ESCHHHHGGGSCT-TC
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEe----CCHHHHHHHHHHHhhCCCceEEE--eehHHhhcccccc-cC
Confidence            468899999997  468888888887777877765    467766777643    2221111  1122333222222 24


Q ss_pred             CcEEE-eCCCCc-----------cHHHHHHhcccCCEEEEEe
Q 017064          262 PALGF-NCVGGN-----------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       262 ~Dvvi-d~~g~~-----------~~~~~~~~l~~~G~~v~~g  291 (378)
                      ||.|+ |+....           .+..+.+.|+|||+++++.
T Consensus       129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            88884 554321           1256789999999998764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.37  E-value=0.02  Score=49.47  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=45.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~i~~~~~~~g~~D  263 (378)
                      .++++||+|+++++|...++.+.. .|++|+++.+......         .....+..+-.+   ++.+.+... .+++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~-~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------ENLKFIKADLTKQQDITNVLDIIK-NVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------TTEEEEECCTTCHHHHHHHHHHTT-TCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---------ccceEEecCcCCHHHHHHHHHHHH-hCCCC
Confidence            467899999999999988876665 7888887765422111         111223222222   233333332 33599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        73 ~lv~nAg~   80 (244)
T 4e4y_A           73 GIFLNAGI   80 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999995

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.34  E-value=0.014  Score=53.90  Aligned_cols=80  Identities=13%  Similarity=0.147  Sum_probs=49.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHH-------HhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKL-------KGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~-------~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .+|||+|++|.+|...++.+...|.+|+++++..... .++.+.+       ...+. .++..+-.+.+.+.+...+.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~-  102 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM-KLHYGDLTDSTCLVKIINEVK-  102 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CE-EEEECCTTCHHHHHHHHHHHC-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCc-eEEEccCCCHHHHHHHHHhcC-
Confidence            5799999999999999998888899999998753210 0111111       00111 223223223344444443322 


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|+||.++|.
T Consensus       103 ~d~vih~A~~  112 (375)
T 1t2a_A          103 PTEIYNLGAQ  112 (375)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECCCc
Confidence            8999999985

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.33  E-value=0.037  Score=47.08  Aligned_cols=74  Identities=11%  Similarity=0.029  Sum_probs=48.8

Q ss_pred             CCCEEEEeCC----------------CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc--H
Q 017064          188 SGDSIVQNGA----------------TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE--V  249 (378)
Q Consensus       188 ~g~~VlV~g~----------------~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~--~  249 (378)
                      .|.+|||+||                +|++|.+.++.+...|++|+.+.+.....     .  ..|.+ +++..+..  .
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~-----~--~~g~~-~~dv~~~~~~~   78 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----T--PPFVK-RVDVMTALEME   78 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----C--CTTEE-EEECCSHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc-----c--CCCCe-EEccCcHHHHH
Confidence            5789999999                58999999999999999999887542100     0  12322 33333211  2


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCc
Q 017064          250 KNVKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      +.+.+..+   .+|++|.++|..
T Consensus        79 ~~v~~~~~---~~Dili~~Aav~   98 (226)
T 1u7z_A           79 AAVNASVQ---QQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHGG---GCSEEEECCBCC
T ss_pred             HHHHHhcC---CCCEEEECCccc
Confidence            33333333   499999999854

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.33  E-value=0.027  Score=52.32  Aligned_cols=88  Identities=13%  Similarity=0.054  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+..    .+.+...++|+...   .     .+.++...   .|+|+.
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~----~~~~~~~~~G~~~~---~-----~l~ell~~---aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR----LPESVEKELNLTWH---A-----TREDMYPV---CDVVTL  253 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC----CCHHHHHHHTCEEC---S-----SHHHHGGG---CSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCc----cchhhHhhcCceec---C-----CHHHHHhc---CCEEEE
Confidence            5789999999 9999999999999999998876432    11233444554321   0     12222222   677777


Q ss_pred             CCCCc-----cH-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGN-----SA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~-----~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++...     .+ ...+..|+++..+|.++
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECC
Confidence            66531     12 45566677766666665

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.32  E-value=0.03  Score=47.70  Aligned_cols=99  Identities=13%  Similarity=0.090  Sum_probs=64.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGL  255 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~  255 (378)
                      +.....+.++++||-.|+ | .|..+..+++.. .+++++.    .+++..+.+++    .|...++..+..   .  ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD----~~~~~~~~a~~~~~~~~~v~~~~~d~~---~--~~  129 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVE----INEKMYNYASKLLSYYNNIKLILGDGT---L--GY  129 (231)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEE----SCHHHHHHHHHHHTTCSSEEEEESCGG---G--CC
T ss_pred             HHHhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEe----CCHHHHHHHHHHHhhcCCeEEEECCcc---c--cc
Confidence            334467889999999998 4 388888888864 7877776    46776666654    221122222211   1  01


Q ss_pred             hcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      ... +.+|+|+....-.. ...+.+.|++||+++..-
T Consensus       130 ~~~-~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          130 EEE-KPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             GGG-CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ccC-CCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence            111 24999997765433 367889999999998775

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.31  E-value=0.016  Score=52.66  Aligned_cols=87  Identities=13%  Similarity=0.131  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+..    .+.+...++|+...      +.+++   ..   ..|+|+-
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~----~~~~~~~~~g~~~~------~l~el---l~---~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKA----LDTQTEQRLGLRQV------ACSEL---FA---SSDFILL  206 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSC----CCHHHHHHHTEEEC------CHHHH---HH---HCSEEEE
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCC----CcHhHHHhcCceeC------CHHHH---Hh---hCCEEEE
Confidence            4789999999 9999999999999999998876532    12223334454221      12222   22   2777777


Q ss_pred             CCCCc-----cH-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGN-----SA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~-----~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++...     .+ ...+..|+++..+|.++
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~a  236 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPC  236 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence            76531     11 46677777777777766

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=95.31  E-value=0.077  Score=49.27  Aligned_cols=35  Identities=9%  Similarity=0.107  Sum_probs=29.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ..+.+|||+||+|.+|...+..+...|.+|+++.+
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r   43 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN   43 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence            46789999999999999999888888999999874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=95.28  E-value=0.029  Score=50.95  Aligned_cols=76  Identities=17%  Similarity=0.154  Sum_probs=48.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-------CcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRG-------IHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g-------~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~  259 (378)
                      .+.+|||+||+|.+|...++.+...|       .+|+++.+......+      ..+.. ..+..+-.+.+.+.+...+ 
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~-   85 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVEA-   85 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHHT-
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHhc-
Confidence            35689999999999999998888889       789888865321111      11111 1222222223344444432 


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                       ++|+||++++.
T Consensus        86 -~~d~vih~A~~   96 (342)
T 2hrz_A           86 -RPDVIFHLAAI   96 (342)
T ss_dssp             -CCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             49999999985

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.26  E-value=0.088  Score=43.96  Aligned_cols=96  Identities=11%  Similarity=0.043  Sum_probs=58.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CC-----------------cEEEccC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-----------------DEVFTES  245 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga-----------------~~vi~~~  245 (378)
                      ..+.++.+||..|+  |.|..+..+++. |++|+++.    .+++-.+.+++. +.                 -.++..+
T Consensus        18 l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD----~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d   90 (203)
T 1pjz_A           18 LNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAE----LSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD   90 (203)
T ss_dssp             HCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEE----ECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred             cccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEe----CCHHHHHHHHHHccCCcccccccccccccCCccEEEECc
Confidence            45778999999997  456777788876 89999887    467766666532 11                 1111111


Q ss_pred             cccHHHHHHHhcCCCCCcEEEeCCCCc---------cHHHHHHhcccCCEEEEEe
Q 017064          246 QLEVKNVKGLLANLPEPALGFNCVGGN---------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~g  291 (378)
                      -..   +.....+  .||+|++...-.         .++...+.|+|||+++++.
T Consensus        91 ~~~---l~~~~~~--~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           91 FFA---LTARDIG--HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             CSS---STHHHHH--SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccc---CCcccCC--CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            111   1100001  499999754321         2356789999999944443

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.25  E-value=0.025  Score=47.95  Aligned_cols=104  Identities=13%  Similarity=0.104  Sum_probs=62.3

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccH-HHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEV-KNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~-~~i~~  254 (378)
                      ......++++||=.|+  +.|..+..+++..  +.+++++.    .+++..+.++    ..|...-+.....+. +.+..
T Consensus        58 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~  131 (225)
T 3tr6_A           58 LLVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCD----VDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAE  131 (225)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred             HHHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEe----CCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHH
Confidence            3345567889999987  4588899999876  46777776    3566555543    445431111111122 12222


Q ss_pred             HhcC--CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          255 LLAN--LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~--~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ....  .+.||+|+-.....    .+..+.+.|++||.++.-.
T Consensus       132 ~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          132 LIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             HHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            2211  02599999555433    2467889999999998654

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.22  E-value=0.055  Score=45.92  Aligned_cols=98  Identities=14%  Similarity=0.109  Sum_probs=59.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhc
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      ..+.++++||-.|+ | .|..+..+++..|  .+|+++.    .+++..+.++    ...-..++..+-........ ..
T Consensus        69 ~~~~~~~~vLDlG~-G-~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~  141 (227)
T 1g8a_A           69 FPIKPGKSVLYLGI-A-SGTTASHVSDIVGWEGKIFGIE----FSPRVLRELVPIVEERRNIVPILGDATKPEEYRA-LV  141 (227)
T ss_dssp             CCCCTTCEEEEETT-T-STTHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTT-TC
T ss_pred             cCCCCCCEEEEEec-c-CCHHHHHHHHHhCCCeEEEEEE----CCHHHHHHHHHHHhccCCCEEEEccCCCcchhhc-cc
Confidence            34788999999998 4 3888889998865  5777775    3564443332    22111222222111111111 12


Q ss_pred             CCCCCcEEEeCCCCc----c-HHHHHHhcccCCEEEEE
Q 017064          258 NLPEPALGFNCVGGN----S-ASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~----~-~~~~~~~l~~~G~~v~~  290 (378)
                      +  .+|+|+.....+    . +..+.+.|++||+++..
T Consensus       142 ~--~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          142 P--KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             C--CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             C--CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            2  499999766543    2 46788999999999876

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.20  E-value=0.023  Score=51.50  Aligned_cols=73  Identities=5%  Similarity=-0.028  Sum_probs=45.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLE-VKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|||+|++|.+|...++.+... |.+|+++++..    ++.+.+. ..+.. ++..+-.+ .+.+.+...+   +|+||.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~----~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~---~d~vih   73 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS----DAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK---CDVVLP   73 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC----GGGGGGTTCTTEE-EEECCTTTCSHHHHHHHHH---CSEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc----chHHHhhcCCCeE-EEeccccCcHHHHHhhccC---CCEEEE
Confidence            6999999999999999888877 89999998742    1111111 11222 22222111 1234444433   999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        74 ~A~~   77 (345)
T 2bll_A           74 LVAI   77 (345)
T ss_dssp             CBCC
T ss_pred             cccc
Confidence            9874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.20  E-value=0.084  Score=46.44  Aligned_cols=90  Identities=11%  Similarity=0.083  Sum_probs=59.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|||+|+ |.+|...+..+...|.+|++++|.    .++.+.+...+...+. .+-.+.+     .   .++|+||.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~-~D~~d~~-----~---~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN----PDQMEAIRASGAEPLL-WPGEEPS-----L---DGVTHLLIST   71 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESC----GGGHHHHHHTTEEEEE-SSSSCCC-----C---TTCCEEEECC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcC----hhhhhhHhhCCCeEEE-ecccccc-----c---CCCCEEEECC
Confidence            58999998 999999999998889999999964    4444445555554432 2222211     1   2499999999


Q ss_pred             CCcc-----HHHHHHhccc----CCEEEEEecC
Q 017064          270 GGNS-----ASKVLKFLSQ----GGTMVTYGGM  293 (378)
Q Consensus       270 g~~~-----~~~~~~~l~~----~G~~v~~g~~  293 (378)
                      +...     ....++.++.    -.++|+++..
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence            8531     2344444433    3689988743

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.18  E-value=0.035  Score=50.18  Aligned_cols=87  Identities=14%  Similarity=0.069  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec-CCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|.+|.|.|. |.+|...++.++..|++|++..+ ..  ..   ..+.++|+.. .    .+.+++   ..   ..|+|+
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~--~~---~~~~~~g~~~-~----~~l~el---l~---~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA--SS---SDEASYQATF-H----DSLDSL---LS---VSQFFS  207 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC--CH---HHHHHHTCEE-C----SSHHHH---HH---HCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCc--Ch---hhhhhcCcEE-c----CCHHHH---Hh---hCCEEE
Confidence            4789999999 99999999999999999988774 32  22   2344556532 1    012222   22   278888


Q ss_pred             eCCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      .++....     + ...+..++++..++.++
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~a  238 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTA  238 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECC
Confidence            8876421     2 45677888888887776

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.18  E-value=0.086  Score=46.60  Aligned_cols=88  Identities=9%  Similarity=-0.034  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHH-HHHHhCCC---cEEEccCcccHHHHHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGA---DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~ga---~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .+++++|+|+ |++|.+.+..+...|+ +|+++.|    +.++. +++++++.   ..+....     ++   .  . .+
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R----~~~~a~~la~~~~~~~~~~~~~~~-----~l---~--~-~a  188 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNR----TFAKAEQLAELVAAYGEVKAQAFE-----QL---K--Q-SY  188 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEES----SHHHHHHHHHHHGGGSCEEEEEGG-----GC---C--S-CE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEEC----CHHHHHHHHHHhhccCCeeEeeHH-----Hh---c--C-CC
Confidence            5789999999 8999999988888997 7777664    44443 33444432   1222221     11   1  1 49


Q ss_pred             cEEEeCCCCccHHH----HHHhcccCCEEEEEe
Q 017064          263 ALGFNCVGGNSASK----VLKFLSQGGTMVTYG  291 (378)
Q Consensus       263 Dvvid~~g~~~~~~----~~~~l~~~G~~v~~g  291 (378)
                      |+||+|++......    -.+.++++..++.+.
T Consensus       189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMM  221 (281)
T ss_dssp             EEEEECSCCCC----CSCCGGGEEEEEEEEESC
T ss_pred             CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEec
Confidence            99999998653221    124566665555554

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.12  E-value=0.026  Score=48.83  Aligned_cols=106  Identities=11%  Similarity=0.114  Sum_probs=62.3

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCc---EEEccCcccHHHHHHHh
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGLL  256 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~---~vi~~~~~~~~~i~~~~  256 (378)
                      .+....++++||=.|+  +.|..++.+|+..  +.+|+++.......+...+.++..|..   .++..+..  +.+..+.
T Consensus        54 ~l~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~--~~l~~~~  129 (242)
T 3r3h_A           54 MLIRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL--DTLHSLL  129 (242)
T ss_dssp             HHHHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH--HHHHHHH
T ss_pred             HHHhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHHHHHh
Confidence            3344567789999886  5677888888876  578887764333222334455556643   22222211  1122221


Q ss_pred             c--CCCCCcEEEeCCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          257 A--NLPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       257 ~--~~g~~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                      .  ..+.||+||-......    ++.+.+.|++||.++.-.
T Consensus       130 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          130 NEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             HHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence            1  0125999986554332    467889999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=95.08  E-value=0.038  Score=49.51  Aligned_cols=70  Identities=11%  Similarity=0.105  Sum_probs=46.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|||+|++|.+|...++.+...  |.+|+++.+......         +... +..+-.+.+.+.+.....+ +|+||++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~-~~~D~~d~~~~~~~~~~~~-~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKF-ITLDVSNRDEIDRAVEKYS-IDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCE-EECCTTCHHHHHHHHHHTT-CCEEEEC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceE-EEecCCCHHHHHHHHhhcC-CcEEEEC
Confidence            4899999999999999877766  789998876432111         2332 2223233344555444223 9999999


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      ++.
T Consensus        70 a~~   72 (317)
T 3ajr_A           70 AGI   72 (317)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            985

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.06  E-value=0.027  Score=51.52  Aligned_cols=77  Identities=12%  Similarity=0.163  Sum_probs=46.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC--CCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN--LPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~--~g~~Dvv  265 (378)
                      +.+|||+||+|.+|...++.+...| .+|+++.+...  ..+...+.  +..  +..+-.+.+.+.++..+  .+++|+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~--~~~--~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--GTKFVNLV--DLN--IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS--GGGGGGTT--TSC--CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC--cchhhccc--Cce--EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            4689999999999999999888889 89999886532  11111111  111  11111122334444432  1249999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |.+++.
T Consensus       120 ih~A~~  125 (357)
T 2x6t_A          120 FHEGAC  125 (357)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999984

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.04  E-value=0.069  Score=45.59  Aligned_cols=76  Identities=11%  Similarity=0.045  Sum_probs=49.2

Q ss_pred             CCCEEEEeCC----------------CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc--cH
Q 017064          188 SGDSIVQNGA----------------TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EV  249 (378)
Q Consensus       188 ~g~~VlV~g~----------------~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~--~~  249 (378)
                      .|.+|||+||                +|.+|.+.++.+..+|++|+.+.+......     ....|. .+++....  -.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-----~~~~~~-~~~~v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-----EPHPNL-SIREITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-----CCCTTE-EEEECCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cCCCCe-EEEEHhHHHHHH
Confidence            5789999999                788999999999999999999986532110     001122 22333221  12


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCc
Q 017064          250 KNVKGLLANLPEPALGFNCVGGN  272 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~  272 (378)
                      +.+.+..+   +.|++|.+++..
T Consensus        76 ~~v~~~~~---~~Dili~aAAvs   95 (232)
T 2gk4_A           76 IEMQERVQ---DYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHGG---GCSEEEECSBCC
T ss_pred             HHHHHhcC---CCCEEEEcCccc
Confidence            33444444   499999999853

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.03  E-value=0.054  Score=48.69  Aligned_cols=94  Identities=11%  Similarity=0.159  Sum_probs=61.6

Q ss_pred             CEEEEeCCCchHHHHHHHHH-H-HcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIA-R-HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la-~-~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      -+|.|.|+ |.+|...+..+ + ..+++++++++....+ ...+.++++|.....    .+.+++.+.+.+. ++|+||+
T Consensus         5 irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~~~~~-~~~~~a~~~g~~~~~----~~~e~ll~~~~~~-~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAAS-DGLARAQRMGVTTTY----AGVEGLIKLPEFA-DIDFVFD   77 (312)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTC-HHHHHHHHTTCCEES----SHHHHHHHSGGGG-GEEEEEE
T ss_pred             CEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeCChhh-hHHHHHHHcCCCccc----CCHHHHHhccCCC-CCcEEEE
Confidence            47899997 99999888887 4 4577888888653211 124566778865321    2234444432222 3999999


Q ss_pred             CCCCcc-HHHHHHhccc--CCEEEEE
Q 017064          268 CVGGNS-ASKVLKFLSQ--GGTMVTY  290 (378)
Q Consensus       268 ~~g~~~-~~~~~~~l~~--~G~~v~~  290 (378)
                      |++... .+.+..+++.  |.++++.
T Consensus        78 atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            999643 3667788887  8887763

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.03  E-value=0.38  Score=44.01  Aligned_cols=88  Identities=15%  Similarity=0.121  Sum_probs=60.3

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      -+|.|.|+ |.+|...+..++.. +++++++++.   ++++.+.++.+|+..   +.  +   ..++.... .+|+|+.|
T Consensus         6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~---~~~~~~~a~~~g~~~---~~--~---~~~ll~~~-~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDI---LAEKREAAAQKGLKI---YE--S---YEAVLADE-KVDAVLIA   72 (359)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECS---SHHHHHHHHTTTCCB---CS--C---HHHHHHCT-TCCEEEEC
T ss_pred             CcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcC---CHHHHHHHHhcCCce---eC--C---HHHHhcCC-CCCEEEEc
Confidence            36899999 99999888777765 7888888864   566666777777632   11  2   22333222 39999999


Q ss_pred             CCCcc-HHHHHHhcccCCEEEEEe
Q 017064          269 VGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      +.... ...+..++..|-. |++.
T Consensus        73 tp~~~h~~~~~~al~aGkh-Vl~E   95 (359)
T 3e18_A           73 TPNDSHKELAISALEAGKH-VVCE   95 (359)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEE
T ss_pred             CCcHHHHHHHHHHHHCCCC-EEee
Confidence            98754 4667777776655 5565

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.00  E-value=0.026  Score=48.01  Aligned_cols=96  Identities=15%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHH----hCCC-------cEEEccCcccHHH
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGA-------DEVFTESQLEVKN  251 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~ga-------~~vi~~~~~~~~~  251 (378)
                      .+.++++||-.|+ | .|..+..+++..|  .+++++.    .+++..+.++    ..|.       -.++..+..   .
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~---~  144 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGID----HIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR---M  144 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG---G
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEe----CCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc---c
Confidence            3789999999998 4 4888889998876  5777766    3566655554    2221       122222211   1


Q ss_pred             HHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEec
Q 017064          252 VKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      .  .... +.+|+|+..... .....+.+.|++||+++..-.
T Consensus       145 ~--~~~~-~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          145 G--YAEE-APYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             C--CGGG-CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             C--cccC-CCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            0  0111 249999876654 345888999999999988653

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=94.98  E-value=0.066  Score=48.67  Aligned_cols=86  Identities=20%  Similarity=0.252  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++..|.+|++..+..    ++ +.+.++|+..    .  +.+++   ..   ..|+|+.
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~----~~-~~~~~~g~~~----~--~l~~~---l~---~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTR----KE-EVERELNAEF----K--PLEDL---LR---ESDFVVL  210 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC----CH-HHHHHHCCEE----C--CHHHH---HH---HCSEEEE
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCc----ch-hhHhhcCccc----C--CHHHH---Hh---hCCEEEE
Confidence            4679999998 9999999999999999998877532    22 3344456421    1  12222   22   2888888


Q ss_pred             CCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++....     + ...+..++++..++.++
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            887532     2 45677888888887765

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=94.97  E-value=0.33  Score=44.73  Aligned_cols=99  Identities=12%  Similarity=0.190  Sum_probs=66.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc-C-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH---------------
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR-G-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV---------------  252 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i---------------  252 (378)
                      .+|.|+|++|.+|..++.+.+.. + .++++++... ..+...+.+++++...+...+.....++               
T Consensus         5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~-ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g~   83 (388)
T 1r0k_A            5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   83 (388)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC-CHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeCc
Confidence            57999999999999999888765 3 6777663221 2333445677889888765443222222               


Q ss_pred             ---HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEe
Q 017064          253 ---KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ---~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g  291 (378)
                         .++.. .. +|+|+++.++ .-+...+..++.|-++++..
T Consensus        84 ~~~~el~~-~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlAN  124 (388)
T 1r0k_A           84 DALVEAAM-MG-ADWTMAAIIGCAGLKATLAAIRKGKTVALAN  124 (388)
T ss_dssp             HHHHHHHT-SC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECC
T ss_pred             cHHHHHHc-CC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeC
Confidence               23333 24 8999999954 55677888899888887653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.95  E-value=0.22  Score=44.76  Aligned_cols=89  Identities=19%  Similarity=0.153  Sum_probs=60.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|.|.|+ |.+|...++.++..|.  +|++..    .++++.+.+.+.|.. .......    +.  ...   ..|+||
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~d----r~~~~~~~a~~~G~~~~~~~~~~----~~--~~~---~aDvVi   99 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYD----INPESISKAVDLGIIDEGTTSIA----KV--EDF---SPDFVM   99 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEEC----SCHHHHHHHHHTTSCSEEESCTT----GG--GGG---CCSEEE
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHCCCcchhcCCHH----HH--hhc---cCCEEE
Confidence            68999998 9999999999998898  777766    367777888888863 2221111    10  112   389999


Q ss_pred             eCCCCccHH----HHHHhcccCCEEEEEec
Q 017064          267 NCVGGNSAS----KVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       267 d~~g~~~~~----~~~~~l~~~G~~v~~g~  292 (378)
                      .|+......    .....++++..++.++.
T Consensus       100 lavp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          100 LSSPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             ECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             EeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            998876543    34455667776666653

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.94  E-value=0.068  Score=48.52  Aligned_cols=86  Identities=10%  Similarity=0.135  Sum_probs=56.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |.+|.|.|. |.+|...++.++..|.+|++..+..    ++.+.+.+.|....      +.+++   ..   ..|+|+.+
T Consensus       155 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~----~~~~~~~~~g~~~~------~l~e~---l~---~aDvVi~~  217 (330)
T 2gcg_A          155 QSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQ----PRPEEAAEFQAEFV------STPEL---AA---QSDFIVVA  217 (330)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSS----CCHHHHHTTTCEEC------CHHHH---HH---HCSEEEEC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC----cchhHHHhcCceeC------CHHHH---Hh---hCCEEEEe
Confidence            679999999 9999999999999999998887532    12223445554321      12222   22   27888888


Q ss_pred             CCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGGNS-----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~-----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +....     + ...+..++++..++.++
T Consensus       218 vp~~~~t~~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          218 CSLTPATEGLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             CCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            76421     2 45667778777777665

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=94.93  E-value=0.057  Score=48.06  Aligned_cols=75  Identities=12%  Similarity=0.133  Sum_probs=46.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC--CCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL--PEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~--g~~Dvvid  267 (378)
                      +|||+|++|.+|...++.+...| .+|+++.+...  ..+...+....    +..+-.+.+.+.++..+.  +++|+||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--GTKFVNLVDLN----IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS--GGGGHHHHTSC----CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC--CchhhhcCcce----eccccccHHHHHHHHhccccCCCcEEEE
Confidence            48999999999999999888889 89998886532  11112222222    111112223444544321  13999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        75 ~a~~   78 (310)
T 1eq2_A           75 EGAC   78 (310)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=94.93  E-value=0.13  Score=43.99  Aligned_cols=95  Identities=11%  Similarity=0.066  Sum_probs=61.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ....+++|.|+ |.+|...++.++..|. |+++.    .++++.+.+. .|.. ++..+..+.+.+.+..  ..++|.+|
T Consensus         7 ~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid----~~~~~~~~~~-~~~~-~i~gd~~~~~~l~~a~--i~~ad~vi   76 (234)
T 2aef_A            7 AKSRHVVICGW-SESTLECLRELRGSEV-FVLAE----DENVRKKVLR-SGAN-FVHGDPTRVSDLEKAN--VRGARAVI   76 (234)
T ss_dssp             ---CEEEEESC-CHHHHHHHHHSTTSEE-EEEES----CGGGHHHHHH-TTCE-EEESCTTCHHHHHHTT--CTTCSEEE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEE----CCHHHHHHHh-cCCe-EEEcCCCCHHHHHhcC--cchhcEEE
Confidence            45678999999 9999999988888888 76665    3566666666 5643 4444444444444431  12499999


Q ss_pred             eCCCCccHH----HHHHhcccCCEEEEEe
Q 017064          267 NCVGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                      -+++.+...    ...+.+.+..+++...
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~~~iia~~  105 (234)
T 2aef_A           77 VDLESDSETIHCILGIRKIDESVRIIAEA  105 (234)
T ss_dssp             ECCSCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred             EcCCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence            999886442    3345556666766554

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.93  E-value=0.032  Score=48.56  Aligned_cols=100  Identities=9%  Similarity=-0.093  Sum_probs=59.6

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEE--------------ccCc-c-
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVF--------------TESQ-L-  247 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi--------------~~~~-~-  247 (378)
                      ...++.+||..|+  |.|..+..+|+. |++|+++.    .++...+.+++ .+.....              .... . 
T Consensus        65 ~~~~~~~vLD~GC--G~G~~~~~La~~-G~~V~gvD----~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  137 (252)
T 2gb4_A           65 KGQSGLRVFFPLC--GKAIEMKWFADR-GHTVVGVE----ISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISL  137 (252)
T ss_dssp             TTCCSCEEEETTC--TTCTHHHHHHHT-TCEEEEEC----SCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEE
T ss_pred             cCCCCCeEEEeCC--CCcHHHHHHHHC-CCeEEEEE----CCHHHHHHHHHhcccccccccccccccccccccCCCceEE
Confidence            3468899999998  457777888875 99988887    57777777753 3321000              0000 0 


Q ss_pred             cHHHHHHHhcC-CCCCcEEEeCCCC-----c----cHHHHHHhcccCCEEEEEe
Q 017064          248 EVKNVKGLLAN-LPEPALGFNCVGG-----N----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       248 ~~~~i~~~~~~-~g~~Dvvid~~g~-----~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...++..+... .+.||+|++...-     +    .++...+.|+|||+++++.
T Consensus       138 ~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          138 YCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             EESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            00112222211 1259999975432     1    2356789999999986554

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=94.92  E-value=0.033  Score=49.82  Aligned_cols=75  Identities=15%  Similarity=0.232  Sum_probs=46.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+|++|.+|...++.+...|.+|+++.+......+.   + .-+.. ++..+-.+.+.+.+..... ++|+||.+++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~-~~~~~-~~~~Dl~~~~~~~~~~~~~-~~d~vi~~a~   75 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN---V-PKGVP-FFRVDLRDKEGVERAFREF-RPTHVSHQAA   75 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG---S-CTTCC-EECCCTTCHHHHHHHHHHH-CCSEEEECCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh---c-ccCeE-EEECCCCCHHHHHHHHHhc-CCCEEEECcc
Confidence            589999999999999998888899999887632111111   1 01222 2222222333444443322 3999999988


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        76 ~   76 (311)
T 2p5y_A           76 Q   76 (311)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=94.90  E-value=0.015  Score=52.39  Aligned_cols=95  Identities=20%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHHHHHhcC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i~~~~~~  258 (378)
                      +.++++||-.|+  +.|..+..+++..|++|+++.    .+++..+.++    ..|..   .++..+-..   +.  ...
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~--~~~  183 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVT----LSAAQADFGNRRARELRIDDHVRSRVCNMLD---TP--FDK  183 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CC--CCT
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHHHHHcCCCCceEEEECChhc---CC--CCC
Confidence            788999999997  458888899988899988887    4666665554    34532   222222111   10  111


Q ss_pred             CCCCcEEEeCCCC------ccHHHHHHhcccCCEEEEEec
Q 017064          259 LPEPALGFNCVGG------NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       259 ~g~~Dvvid~~g~------~~~~~~~~~l~~~G~~v~~g~  292 (378)
                       +.||+|+....-      ..+..+.+.|+|||+++....
T Consensus       184 -~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          184 -GAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             -TCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence             259999874331      234778899999999998763

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=94.89  E-value=0.012  Score=52.85  Aligned_cols=35  Identities=14%  Similarity=0.177  Sum_probs=31.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~  223 (378)
                      +.+|||+|++|.+|...++.+...|.+|++++|..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   41 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLR   41 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence            57899999999999999999988899999998753

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.88  E-value=0.21  Score=43.93  Aligned_cols=87  Identities=17%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|.|.|+ |.+|...++.++..|.  +|++..    .++++.+.+++.|... ...    +.+   +....  ..|+||.
T Consensus         3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d----~~~~~~~~~~~~g~~~~~~~----~~~---~~~~~--~aDvVil   68 (281)
T 2g5c_A            3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYD----INPESISKAVDLGIIDEGTT----SIA---KVEDF--SPDFVML   68 (281)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEEC----SCHHHHHHHHHTTSCSEEES----CGG---GGGGT--CCSEEEE
T ss_pred             EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHCCCcccccC----CHH---HHhcC--CCCEEEE
Confidence            6899998 9999999999888887  777765    3677777777777641 211    111   11220  2899999


Q ss_pred             CCCCccHH----HHHHhcccCCEEEEEe
Q 017064          268 CVGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                      |+......    .....++++..++.++
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            99875543    3334566777666655

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=94.87  E-value=0.058  Score=48.96  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+.+|||+|++|.+|...++.+...|.+|+++.+.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999999999888889999999875

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=94.83  E-value=0.081  Score=49.47  Aligned_cols=95  Identities=15%  Similarity=0.153  Sum_probs=57.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcC---CcEEEEecCCCCcHHHHHHH-HhCCC-----cEEEccCcccHHHHHHHhcCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKL-KGLGA-----DEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g---~~vi~~~~~~~~~~~~~~~~-~~~ga-----~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      .+|+|+|+ |++|..+++.+...|   .+|+++.+    +.++.+.+ .+++.     -..+..+-.+.+.+.++..+.+
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r----~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~   76 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASR----TLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK   76 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEES----CHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEEC----CHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence            37999999 999999998888777   37776664    45554333 33321     1222222222334444433222


Q ss_pred             CCcEEEeCCCCccH-HHHHHhcccCCEEEEE
Q 017064          261 EPALGFNCVGGNSA-SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       261 ~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~  290 (378)
                       +|+||+|++...- ..+..++..+-.++.+
T Consensus        77 -~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           77 -PQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             -CSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             -CCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence             9999999986432 3445677777777754

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=94.83  E-value=0.054  Score=49.10  Aligned_cols=33  Identities=21%  Similarity=0.077  Sum_probs=28.9

Q ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEec
Q 017064          189 GDSIVQNGATS--IVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       189 g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ++++||+|+++  ++|.+.++.+...|++|+++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~   36 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEec
Confidence            67899999965  9999999888889999998873

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=94.80  E-value=0.022  Score=49.79  Aligned_cols=93  Identities=12%  Similarity=0.003  Sum_probs=59.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|||+|++|.+|...++.+...|.+|+++.|......       ..+. .++..+-.+.+.+.+...+   +|+||+++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~-~~~~~Dl~d~~~~~~~~~~---~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHE-EIVACDLADAQAVHDLVKD---CDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTE-EECCCCTTCHHHHHHHHTT---CSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCc-cEEEccCCCHHHHHHHHcC---CCEEEECC
Confidence            47999999999999999888888999998886532110       1122 2333333344556666653   99999998


Q ss_pred             CCc---cH-----------HHHHHhccc--CCEEEEEecC
Q 017064          270 GGN---SA-----------SKVLKFLSQ--GGTMVTYGGM  293 (378)
Q Consensus       270 g~~---~~-----------~~~~~~l~~--~G~~v~~g~~  293 (378)
                      +..   ..           ...++.+.+  .+++|+++..
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  111 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSN  111 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCH
Confidence            742   11           223333333  3689998854

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.80  E-value=0.11  Score=45.98  Aligned_cols=87  Identities=11%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      -.++++||+|+ |+.|.+++..+...|+ +++++.|    +.++.+.+ .+++   .+.     .+++..    . .+|+
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nR----t~~ka~~La~~~~---~~~-----~~~l~~----l-~~Di  181 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTR----NPEKTSEIYGEFK---VIS-----YDELSN----L-KGDV  181 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEES----CHHHHHHHCTTSE---EEE-----HHHHTT----C-CCSE
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHhcC---ccc-----HHHHHh----c-cCCE
Confidence            35789999999 8999999999999999 6666664    45554333 3332   111     223322    2 3999


Q ss_pred             EEeCCCCccH------HHHHHhcccCCEEEEEe
Q 017064          265 GFNCVGGNSA------SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       265 vid~~g~~~~------~~~~~~l~~~G~~v~~g  291 (378)
                      ||+|++....      .-....++++..++.+.
T Consensus       182 vInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv  214 (282)
T 3fbt_A          182 IINCTPKGMYPKEGESPVDKEVVAKFSSAVDLI  214 (282)
T ss_dssp             EEECSSTTSTTSTTCCSSCHHHHTTCSEEEESC
T ss_pred             EEECCccCccCCCccCCCCHHHcCCCCEEEEEe
Confidence            9999853211      11345677777776664

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.78  E-value=0.088  Score=46.14  Aligned_cols=85  Identities=14%  Similarity=0.153  Sum_probs=56.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +++++|+|+ |++|.+++..+...|.+++++.|+.   +...+++ ++|.. .....+     +    .   .+|+||+|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~---~ka~~la-~~~~~-~~~~~~-----l----~---~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSS---RGLDFFQ-RLGCD-CFMEPP-----K----S---AFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC---TTHHHHH-HHTCE-EESSCC-----S----S---CCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHH-HCCCe-EecHHH-----h----c---cCCEEEEc
Confidence            889999998 9999999999988998887777642   2222333 66643 222221     1    1   39999999


Q ss_pred             CCCc-----cH-HH-HHHhcccCCEEEEEe
Q 017064          269 VGGN-----SA-SK-VLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~-----~~-~~-~~~~l~~~G~~v~~g  291 (378)
                      ++..     .+ .. ....++++..++.+.
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence            8743     22 22 233677888877775

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.75  E-value=0.57  Score=42.18  Aligned_cols=88  Identities=16%  Similarity=0.151  Sum_probs=55.0

Q ss_pred             EEEEeCCCchHHHHH-HHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCI-IQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~a-v~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.|.|+ |.+|... +..++..+.+++++++.   ++++. +..+++|...++  .  +   ..++.... .+|+|+.|
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~---~~~~~~~~~~~~g~~~~~--~--~---~~~~l~~~-~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMST---SAERGAAYATENGIGKSV--T--S---VEELVGDP-DVDAVYVS   69 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECS---CHHHHHHHHHHTTCSCCB--S--C---HHHHHTCT-TCCEEEEC
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECC---CHHHHHHHHHHcCCCccc--C--C---HHHHhcCC-CCCEEEEe
Confidence            5889999 9999876 54433378888888764   45444 345667764222  1  1   22333222 39999999


Q ss_pred             CCCcc-HHHHHHhcccCCEEEEEe
Q 017064          269 VGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      +.... ...+..++..|-. |++.
T Consensus        70 tp~~~h~~~~~~al~~Gk~-v~~e   92 (332)
T 2glx_A           70 TTNELHREQTLAAIRAGKH-VLCE   92 (332)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             CChhHhHHHHHHHHHCCCe-EEEe
Confidence            98755 4566677776544 5554

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=94.75  E-value=0.74  Score=41.91  Aligned_cols=88  Identities=11%  Similarity=-0.013  Sum_probs=57.2

Q ss_pred             CEEEEeCCCchHHH-HHHHHHHHc-CCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQ-CIIQIARHR-GIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~-~av~la~~~-g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      -+|.|.|+ |.+|. ..+..++.. +++++++++.   ++++. +.++++|....     .+   ..++.... .+|+|+
T Consensus        28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~---~~~~~~~~a~~~g~~~~-----~~---~~~ll~~~-~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASR---RWDRAKRFTERFGGEPV-----EG---YPALLERD-DVDAVY   94 (350)
T ss_dssp             EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEES---SHHHHHHHHHHHCSEEE-----ES---HHHHHTCT-TCSEEE
T ss_pred             eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcC---CHHHHHHHHHHcCCCCc-----CC---HHHHhcCC-CCCEEE
Confidence            37999999 99997 555555555 7888888864   44444 44566776543     12   22333222 399999


Q ss_pred             eCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          267 NCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      .|+.... ...+..++..|-. |++.
T Consensus        95 i~tp~~~h~~~~~~al~aGk~-Vl~E  119 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAGKH-VLAE  119 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCc-EEEe
Confidence            9998754 4666677776655 5665

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=94.74  E-value=1.2  Score=40.77  Aligned_cols=114  Identities=11%  Similarity=0.093  Sum_probs=67.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC----C------CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR----A------GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~----~------~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      ++.+|+|.|+ |..|..+++++...|++-+.+++.+    .      -.+.+..++++....    ...   ..+.+...
T Consensus       191 ~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~----~~~---~~L~eav~  262 (388)
T 1vl6_A          191 EEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE----RLS---GDLETALE  262 (388)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT----CCC---SCHHHHHT
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc----Cch---hhHHHHHc
Confidence            5579999999 9999999999999999444444432    1      123345555554321    111   12344343


Q ss_pred             CCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEE
Q 017064          258 NLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      +   +|++|-+++...+ +..++.|+++.-++.+..   ...+..+...+..+..+..+
T Consensus       263 ~---ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN---Pt~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          263 G---ADFFIGVSRGNILKPEWIKKMSRKPVIFALAN---PVPEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             T---CSEEEECSCSSCSCHHHHTTSCSSCEEEECCS---SSCSSCHHHHHHTTCSEEEE
T ss_pred             c---CCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC---CCCCCCHHHHHHhcCeEEEe
Confidence            3   8999998885444 667777888775544442   22344444444444344444

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=94.72  E-value=0.11  Score=45.58  Aligned_cols=89  Identities=9%  Similarity=-0.017  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHH-HHHhCCC--cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKE-KLKGLGA--DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~-~~~~~ga--~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+++++|+|+ |++|.+++..+...|+ +++++.|    +.++.+ ++++++.  ..++...     ++..    . .+|
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R----~~~~a~~la~~~~~~~~~~~~~~-----~l~~----~-~~D  183 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANR----DMAKALALRNELDHSRLRISRYE-----ALEG----Q-SFD  183 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECS----CHHHHHHHHHHHCCTTEEEECSG-----GGTT----C-CCS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhccCCeeEeeHH-----Hhcc----c-CCC
Confidence            5789999999 8999999988888997 6666664    444443 4455543  2222222     1111    1 499


Q ss_pred             EEEeCCCCccHH----HHHHhcccCCEEEEEe
Q 017064          264 LGFNCVGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       264 vvid~~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                      +||+|++.....    -..+.++++..++.+.
T Consensus       184 ivInaTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          184 IVVNATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             EEEECSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             EEEECCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            999998753211    0124577777776664

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.69  E-value=0.072  Score=48.53  Aligned_cols=85  Identities=19%  Similarity=0.199  Sum_probs=55.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |.+|.|.|. |.+|...++.++.+|++|++..+... ..+.   .  .|+..+        +.+.++...   .|+|+-+
T Consensus       173 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~-~~~~---~--~g~~~~--------~~l~ell~~---sDvV~l~  234 (345)
T 4g2n_A          173 GRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRL-SHAL---E--EGAIYH--------DTLDSLLGA---SDIFLIA  234 (345)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCC-CHHH---H--TTCEEC--------SSHHHHHHT---CSEEEEC
T ss_pred             CCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCc-chhh---h--cCCeEe--------CCHHHHHhh---CCEEEEe
Confidence            679999999 99999999999999999998775321 1111   1  143321        122233332   7788777


Q ss_pred             CCCc-c----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGGN-S----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~-~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +... .    + ...+..|+++..+|.++
T Consensus       235 ~Plt~~T~~li~~~~l~~mk~gailIN~a  263 (345)
T 4g2n_A          235 APGRPELKGFLDHDRIAKIPEGAVVINIS  263 (345)
T ss_dssp             SCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred             cCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence            7632 1    1 56677788877777765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.68  E-value=0.03  Score=46.93  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=30.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDR  223 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~  223 (378)
                      +.+|||+|++|.+|...++.+...|.  +|++++|..
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~   41 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   41 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCC
Confidence            56899999999999999999999998  898888653

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.67  E-value=0.058  Score=49.34  Aligned_cols=35  Identities=14%  Similarity=0.093  Sum_probs=30.6

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHH-HcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~  222 (378)
                      -.|.+|.|.|. |.+|...++.++ ..|.+|++..+.
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~  196 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVA  196 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCC
Confidence            34789999999 999999999999 999998887643

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.53  E-value=0.074  Score=47.21  Aligned_cols=83  Identities=14%  Similarity=0.173  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|.|.|. |.+|...++.++.+|++|++..+.....+         ...      .  ...+.++..+   .|+|+-
T Consensus       121 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~---------~~~------~--~~~l~ell~~---aDiV~l  179 (290)
T 3gvx_A          121 YGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQN---------VDV------I--SESPADLFRQ---SDFVLI  179 (290)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTT---------CSE------E--CSSHHHHHHH---CSEEEE
T ss_pred             ecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccccc---------ccc------c--cCChHHHhhc---cCeEEE
Confidence            3689999999 99999999999999999998875421110         010      0  0112222222   778887


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++.. +.    + ...+..|+++..+|.++
T Consensus       180 ~~P~t~~t~~li~~~~l~~mk~gailIN~a  209 (290)
T 3gvx_A          180 AIPLTDKTRGMVNSRLLANARKNLTIVNVA  209 (290)
T ss_dssp             CCCCCTTTTTCBSHHHHTTCCTTCEEEECS
T ss_pred             EeeccccchhhhhHHHHhhhhcCceEEEee
Confidence            7763 21    1 56677788888877776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	378
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	5e-26
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	1e-15
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	2e-12
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	3e-12
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-11
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-11
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-11
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	9e-11
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-10
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-10
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	5e-10
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	7e-10
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-10
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	2e-09
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	7e-09
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-08
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	4e-08
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	5e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	5e-08
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-08
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	7e-08
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	9e-08
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-07
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	6e-07
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	8e-07
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-06
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-06
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-06
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-06
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	5e-06
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	6e-06
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	6e-06
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	8e-06
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	9e-06
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	1e-05
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-05
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	4e-05
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	7e-05
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-04
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-04
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	0.001
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	0.002

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score =  101 bits (251), Expect = 5e-26
 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 7/188 (3%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDS-IVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           +   ATI VNPLTA  ML  +  L  G    +QNG TS VG+   QI +    +SI++IR
Sbjct: 3   INQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR 62

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG-----FNCVGGNSASK 276
           DR   DE    LK LGA +V TE Q   +     +    + + G      NCVGG S++ 
Sbjct: 63  DRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTG 122

Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
           + + L+  G M+TYGGMS +P+T+ TS +IFK+ +  GFW+ + L + K     + ++ +
Sbjct: 123 IARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE-LKTSTLNQI 181

Query: 337 LCLAREGK 344
           +    EGK
Sbjct: 182 IAWYEEGK 189

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (174), Expect = 1e-15
 Identities = 28/146 (19%), Positives = 56/146 (38%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AV     G P+ +    ++     K++ V +K+ A  +NP +     G Y  +P +P  
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G +  G + +VG   +    GD V  S   SG +  Y +      +K+ +       + 
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQ 123

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQ 194
             +  +          +  +G  I+ 
Sbjct: 124 YPLEKVAEAHENIIHGSGATGKMILL 149

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 63.2 bits (152), Expect = 2e-12
 Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 15/173 (8%)

Query: 48  SKAVVYEREGPPDSVIKM--IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--- 102
           ++AV+Y + G P  V+     E+    +  N+V VK L +P+NPSDIN+I+GVYP +   
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 103 ------PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                  +  A  G EG+ EV  VGS V+ L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 157 VSKDSPMEYAATIIVNPLTALRMLED-FTTLNSGDSIVQNG-ATSIVGQCIIQ 207
               +P +  A    N LT  + +E  +        + Q+G A S  G+ +I 
Sbjct: 124 --LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 62.4 bits (150), Expect = 3e-12
 Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 5/183 (2%)

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
             AAT  V  LTA   L +   L+ G+ ++ + AT  VG   + IA+  G          
Sbjct: 1   NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 60

Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283
           A  +           D    +   E+      L +     +  N + G +  + ++ L+ 
Sbjct: 61  AKREMLSRLGVEYVGDSRSVDFADEILE----LTDGYGVDVVLNSLAGEAIQRGVQILAP 116

Query: 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG 343
           GG  +  G            A + K  S     L   L  + A   R ++ ++L    +G
Sbjct: 117 GGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA-RYRQLLQHILQHVADG 175

Query: 344 KLK 346
           KL+
Sbjct: 176 KLE 178

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 59.9 bits (144), Expect = 1e-11
 Identities = 20/163 (12%), Positives = 53/163 (32%), Gaps = 8/163 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+  E+       + +  +   ++ ++ V +K+  + IN  D    +    +  + P +
Sbjct: 5   QALQAEKNADDV-SVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLI 63

Query: 109 GGYEGVG---EVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY 165
            G +  G          A                 G    Y          + ++  ++ 
Sbjct: 64  LGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 123

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208
           A    +  +    +  +  T  +   I+QN      G+ I+++
Sbjct: 124 AMVDQLLTIVDREVSLE-ETPGALKDILQNRIQ---GRVIVKL 162

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-11
 Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 51/193 (26%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V    G P   + + E+     K ++V +K++A  +  +D   + G  P     P 
Sbjct: 7   CKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPV 62

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------- 140
           + G+ G G V SVG  VT+L  GD VIP                                
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122

Query: 141 --------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
                                T+  Y V       K+     ++   T  ++     +  
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAF 182

Query: 181 EDFTTLNSGDSIV 193
           E   +  S  ++V
Sbjct: 183 ELMHSGKSIRTVV 195

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 60.1 bits (144), Expect = 2e-11
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 15/189 (7%)

Query: 162 PMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
           P+  A  TI +  LTA   L +   +  G++++ + A   VG  + QIA+ +G   +   
Sbjct: 2   PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG-- 59

Query: 221 RDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280
              AGSDE    LK +G D  F    +         A+       F+ VGG   + VL  
Sbjct: 60  --AAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQ 117

Query: 281 LSQGGTMVTYGGMS------KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 334
           +   G +   G +S      + P   S  + I+K L ++GF + +W    +    R+++ 
Sbjct: 118 MKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMK 177

Query: 335 YLLCLAREG 343
           ++     EG
Sbjct: 178 WV----LEG 182

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.0 bits (139), Expect = 9e-11
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 30/159 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P   +++ E+         V VK+ A+ +  +D++  EG +PV+P +P +
Sbjct: 7   KAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG--------------------------- 141
            G+EGVG V +VGS VTR+  GD V      +                            
Sbjct: 64  PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 123

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
            +  YV+ D +    + K+         + +    L  +
Sbjct: 124 GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM 162

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 57.3 bits (137), Expect = 2e-10
 Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 41/185 (22%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
            AV+Y      D  ++   +P  E KE++V ++M    I  SD++  E        V  P
Sbjct: 4   SAVLY---KQNDLRLEQRPIP--EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-------------------------- 140
            V G+E  G V  VG  V  L  GD V   P                             
Sbjct: 59  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118

Query: 141 -GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
            G    Y V      HK+  +  ++   T        +   E      + ++I       
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE-AARKKADNTIK------ 171

Query: 200 IVGQC 204
           ++  C
Sbjct: 172 VMISC 176

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 10/153 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V  +         +  +   ++ E DV V++  + +N  D         +    P V
Sbjct: 5   QAFVVNKTETEF-TAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPM 163
            G +  G V  V S   R   GD VI +         G +  Y          + K    
Sbjct: 64  PGIDLAGVV--VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER 121

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 196
             A  I +  L           L  G ++V+  
Sbjct: 122 I-AQEISLAELPQALKRILRGELR-GRTVVRLA 152

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 55.3 bits (132), Expect = 5e-10
 Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A++ E++     +  +  L    + E DV V +  + +N  D   I G   +    P +
Sbjct: 2   QALLLEQQDGKT-LASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPM 163
            G +  G V +  S   R   G  V+ +         G               + +    
Sbjct: 61  PGIDFAGTVRT--SEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 164 EYAATIIVNPLTALRML 180
           +  +           + 
Sbjct: 119 KEISLSEAPNFAEAIIN 135

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.4 bits (130), Expect = 7e-10
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 17/145 (11%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +R G P   +++++LP  E +E +V +++ A  +N +D     G Y  R   P +
Sbjct: 2   KAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E VG V                  +    G     V   +     + +  P+     
Sbjct: 59  PGMEVVGVVE------------GRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVF 106

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIV 193
                  A R L      ++G  +V
Sbjct: 107 PFAEAEAAFRAL--LDRGHTGKVVV 129

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.6 bits (133), Expect = 8e-10
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 40/187 (21%)

Query: 44  MSPPS--KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           MS P   + +  +      +  K  +  P    ++D+ +K+ A  +  SDI+   G +  
Sbjct: 1   MSYPEKFEGIAIQSHEDWKN-PKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG- 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSA-VTRLAPGDWV--------------------------- 133
             K+P V G+E VG+V  +G    + L  G  V                           
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 134 -------IPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 186
                       S G + +YV   +     + ++  +E           A   +E    +
Sbjct: 119 TTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEK-GDV 177

Query: 187 NSGDSIV 193
               ++V
Sbjct: 178 RYRFTLV 184

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 53.8 bits (128), Expect = 2e-09
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 6/143 (4%)

Query: 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 234
            ++  LE         S++  GAT  VG   + +   RG   +        + EA + LK
Sbjct: 10  LSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG----NREAADYLK 65

Query: 235 GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 294
            LGA EV +   +    +K L     +     + VGG   + +L  +  GG++   G   
Sbjct: 66  QLGASEVISREDVYDGTLKALSKQQWQ--GAVDPVGGKQLASLLSKIQYGGSVAVSGLTG 123

Query: 295 KKPITVSTSAFIFKDLSLKGFWL 317
              +  +   FI + +SL G   
Sbjct: 124 GGEVPATVYPFILRGVSLLGIDS 146

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 7e-09
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 6/155 (3%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
            +  A I +   TA R L     + +G+S++ +GA+  VG    QIAR  G+  +     
Sbjct: 3   FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 62

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
             G     +     GA EVF   ++   +            +    +   + SK L  LS
Sbjct: 63  EEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLS 118

Query: 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
            GG ++  G      I ++    + K+ S+ G  L
Sbjct: 119 HGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTL 151

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 51.1 bits (121), Expect = 2e-08
 Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 37/169 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP----- 103
           +AV     G P   + + E+   + K   V +K+ AA +  SD++  +G +         
Sbjct: 2   RAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 104 --KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS---------------------- 139
             K+P   G+E  G++  VG  V   + GD V  +P                        
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 140 ----SGTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF 183
                G +  Y +V      +K+ +  PM      +     A+  LE+F
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENF 167

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 49.6 bits (117), Expect = 4e-08
 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +  + + + G P+ V++ +E  P +  EN++ V+  A  IN  D     G+YP  P +P+
Sbjct: 1   ATRIEFHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPS 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY-- 165
             G E  G V  VGS V  +  GD V+ +  + G + S           +     ++   
Sbjct: 59  GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAE 118

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIV 193
                +        + + +    G S++
Sbjct: 119 QQKYPLKDAQRAHEILE-SRATQGSSLL 145

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 50.7 bits (120), Expect = 5e-08
 Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 51/193 (26%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V      P   + + E+       N++ +K++A  +  +D+  +      +   P 
Sbjct: 9   CKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLF-EGKHKDGFPV 64

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------------------ 137
           V G+EG G V SVG  VT   PG+ VIP                                
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124

Query: 138 -----------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
                              + T+  Y V +Q    K+     ++   T  +   +    +
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAI 184

Query: 181 EDFTTLNSGDSIV 193
           +         +++
Sbjct: 185 DLMKHGKCIRTVL 197

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.1 bits (118), Expect = 5e-08
 Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 14/181 (7%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
            E AA   V+ LTA   L+       G+ ++   A   +G   +Q+AR  G+  +     
Sbjct: 3   PEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 61

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
                E       LGA+E  T +++  +                  V G    + L  L+
Sbjct: 62  ----PEKLALPLALGAEEAATYAEVPERAKA------WGGLDLVLEVRGKEVEESLGLLA 111

Query: 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL-CLAR 341
            GG +V  G    +   +     + ++L++ GFWL   L   +       + +LL  L R
Sbjct: 112 HGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL--REGALVEEALGFLLPRLGR 169

Query: 342 E 342
           E
Sbjct: 170 E 170

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 5e-08
 Identities = 24/186 (12%), Positives = 45/186 (24%), Gaps = 14/186 (7%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P++    +     T      +   L  G      G   +    I+          I +  
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD- 60

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKF 280
               + +   + K  GA E            + L+          F C+G     +    
Sbjct: 61  ---INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALE 117

Query: 281 LSQGGTMVTY--GGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338
               G  V+   G  +      +    +    + KG     W S          +  L+ 
Sbjct: 118 ACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKS-------VESVPKLVS 170

Query: 339 LAREGK 344
                K
Sbjct: 171 EYMSKK 176

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 49.6 bits (117), Expect = 7e-08
 Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 9/183 (4%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
            E AA   +  LT   +L     +   +  + + A   VG    Q A+  G      +  
Sbjct: 3   FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK----LIG 58

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             G+ +  +     GA +V    + + V+ +K +        + ++ VG ++  + L  L
Sbjct: 59  TVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVV-YDSVGRDTWERSLDCL 117

Query: 282 SQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340
            + G MV++G  S     V+      K  L +    LQ ++++ +  E     + L  L 
Sbjct: 118 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTRE--ELTEASNELFSLI 175

Query: 341 REG 343
             G
Sbjct: 176 ASG 178

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 49.5 bits (117), Expect = 9e-08
 Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 11/158 (6%)

Query: 163 MEYAATIIVNPLTA---LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
              A  I     TA   +  LED         IV  GA+  VG   + +    G   + +
Sbjct: 3   ARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAV 62

Query: 220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
               +  +  K     LGA  V      E    + L   +   A   + VG    +KVL 
Sbjct: 63  SGRESTHEYLKS----LGASRVLPRD--EFAESRPLEKQVW--AGAIDTVGDKVLAKVLA 114

Query: 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
            ++ GG +   G      +  +   FI +++ L+G   
Sbjct: 115 QMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDS 152

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 47.7 bits (112), Expect = 3e-07
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E+   P   +K+ E+    +   +V V++ A  +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP 138
            G+EGVG V  VG  VT L  GD V     
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWL 88

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 46.9 bits (110), Expect = 6e-07
 Identities = 20/185 (10%), Positives = 49/185 (26%), Gaps = 13/185 (7%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P++    +     T      +   +  G +    G  ++    ++          I +  
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE-PALGFNCVGGNSASKVLKF 280
           +     +  EK K  GA +    +       + L             CVG     +    
Sbjct: 62  N----PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALE 117

Query: 281 LSQGGTMVTY-GGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339
               G  V+   G +      +    +    + KG     +         ++ +  ++  
Sbjct: 118 SCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG-------KDGVPKMVKA 170

Query: 340 AREGK 344
             + K
Sbjct: 171 YLDKK 175

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 46.8 bits (110), Expect = 8e-07
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V   E  P     + E+     K ++V +KM+A  I  SD + + G       V A
Sbjct: 9   CKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIA 65

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
              +E  G V S+G  VT + PGD VIP               +  + 
Sbjct: 66  G--HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFC 111

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 14/187 (7%)

Query: 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
           SP+E    I     T          +  G +    G   +    I+      G   I  +
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK-AAGAARIIGV 59

Query: 221 RDRAGSDEAKEKLKGLGADEVF--TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
                + +   K K +GA E     + +  ++ V   ++N             ++    L
Sbjct: 60  D---INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL 116

Query: 279 KFLSQGGTMVTYGGMSKKPITVSTSAFIF-KDLSLKGFWLQKWLSSEKATECRNMIDYLL 337
               +   +    G+      +S +  +     + KG     + S       ++ +  L+
Sbjct: 117 SCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS-------KDSVPKLV 169

Query: 338 CLAREGK 344
                 K
Sbjct: 170 ADFMAKK 176

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 18/185 (9%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P   AA ++   LT    L        G  +   G    +G     I++  G  +  I R
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRN-GCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR 59

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
                ++A +     GAD      +      +          +  + +     + + K +
Sbjct: 60  SSRKREDAMKM----GADHYIATLEEGDW-GEKYFDTFDLIVVCASSLTDIDFNIMPKAM 114

Query: 282 SQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 341
             GG +V+   + ++   +S   +  K +S+         S +   E   ++     L  
Sbjct: 115 KVGGRIVSI-SIPEQHEMLSLKPYGLKAVSISYSA---LGSIK---ELNQLLK----LVS 163

Query: 342 EGKLK 346
           E  +K
Sbjct: 164 EKDIK 168

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 4/158 (2%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           ++  A  + +  TA    +++    +G ++V  GA   +G   + IAR  G  ++ +I  
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAG 61

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFL 281
                +  E++           S  E +     + +           G + A  +  + L
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 282 SQGGTMVTYG-GMSKKPITVSTSAFI-FKDLSLKGFWL 317
            +GG     G  + + P+      ++  K+ + KG W+
Sbjct: 122 RRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV 159

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 44.9 bits (105), Expect = 4e-06
 Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 53/209 (25%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVE-----VKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           ++ VVY   G     ++ I+ P ++       E+ V +K+++  I  SD + + G    +
Sbjct: 2   NRGVVYL--GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ 59

Query: 103 PKVPAVGGYEGVG----------------------------------EVYSVGSAVTRLA 128
             +       G                                        +     R  
Sbjct: 60  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAG 119

Query: 129 PGDWVIPSPPSSGTWQSYVV---KDQSVWHKVSKDSPMEYAATIIVNPL-TALRMLEDFT 184
                +     +G    YV+    D ++     +D  ME     I   +   +  L+D  
Sbjct: 120 GAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIN--IAEVVGVQVISLDD-- 175

Query: 185 TLNSGDSIVQNGATSIVGQCIIQIARHRG 213
               G      G      + +I   +   
Sbjct: 176 -APRGYGEFDAGV---PKKFVIDPHKTFS 200

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 44.5 bits (104), Expect = 5e-06
 Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 9/155 (5%)

Query: 163 MEYAATIIVNPLTA---LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
           ++ A  I     TA   +  LE+         ++  GAT  VG   + +   RG      
Sbjct: 3   LKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS 62

Query: 220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
                G     + L+ LGA EV     +  + ++ L       A   + VGG + + VL 
Sbjct: 63  T----GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQR--WAAAVDPVGGRTLATVLS 116

Query: 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314
            +  GG +   G      +  +   FI + +SL G
Sbjct: 117 RMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLG 151

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 38/183 (20%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD--INRIEGV 98
           +A   P + ++V    GP D  ++   +P  E   N+V ++M +  I  SD        +
Sbjct: 1   AAAAKPNNLSLVVH--GPGDLRLENYPIP--EPGPNEVLLRMHSVGICGSDVHYWEYGRI 56

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------- 137
                K P V G+E  G V  VGS+V  L PGD V   P                     
Sbjct: 57  GNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSI 116

Query: 138 ------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLNSGD 190
                 P  G    +   + +  +K+  +          +   L A    +       G 
Sbjct: 117 FFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFETFK----KGLGL 172

Query: 191 SIV 193
            I+
Sbjct: 173 KIM 175

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 44.5 bits (104), Expect = 6e-06
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA +  + G P   I+ IE+     K  +V ++++A  + P+DIN  +        V  
Sbjct: 9   CKAAIAWKTGSPL-CIEEIEVS--PPKACEVRIQVIATCVCPTDINATDPKKKALFPVVL 65

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
              +E  G V SVG  VT   PGD VIP
Sbjct: 66  G--HECAGIVESVGPGVTNFKPGDKVIP 91

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 43.7 bits (102), Expect = 8e-06
 Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 12/184 (6%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P+E    +     T      +   +    S V  GA ++    ++          I +  
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
                +   E  K LGA  V      +       + +        +        + +  L
Sbjct: 62  V----ESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 282 SQGGTMVTYG-GMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340
              G +   G            +  +    ++ G               +  I  L+ L 
Sbjct: 118 GILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSP-------KKFIPELVRLY 170

Query: 341 REGK 344
           ++GK
Sbjct: 171 QQGK 174

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (102), Expect = 9e-06
 Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 19/191 (9%)

Query: 165 YAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +   I +  LT+L  +++   +++G   ++V +GA    G    QI    G   +  I  
Sbjct: 5   FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG 64

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282
                E    L      +     +      +   A      + F+ VGG+ ++ V+  ++
Sbjct: 65  T---QEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 283 QGGTMVTYGGMSKKPITVST---------SAFIFKDLSLKGFWLQKWLSSEKATECRNMI 333
           +   ++  G +S+    V           +    ++++ + F +  +       +    I
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKD-----KFEPGI 176

Query: 334 DYLLCLAREGK 344
             L    +EGK
Sbjct: 177 LQLSQWFKEGK 187

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 18/153 (11%)

Query: 48  SKAVVYER--EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           +K+   ++  +G P  S  ++  +    +K  +V ++ L   ++P            R K
Sbjct: 4   AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-----ASKRLK 58

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
             AV   + V  V  V S  +    G  V+    +   W ++ + D     K+  + P +
Sbjct: 59  EGAVMMGQQVARV--VESKNSAFPAGSIVL----AQSGWTTHFISDGKGLEKLLTEWPDK 112

Query: 165 YAATIIVNPLTALRMLEDFTTL----NSGDSIV 193
                         M   F  +    N G ++V
Sbjct: 113 KIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 145

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 42.6 bits (99), Expect = 3e-05
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V      P   + +  +     K ++V +K+LA+ I  SD + ++ + P +  V  
Sbjct: 9   CKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVI- 64

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 146
             G+E VG V S+G+ VT + PGD VIP           
Sbjct: 65  -LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRA 102

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 41.5 bits (96), Expect = 4e-05
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           +S++  +E  A +    +TA R ++         + V       +G   +Q+ +     +
Sbjct: 1   ISREKLVE-MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPAT 59

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           +  +  +   +E  +  + LGAD V    +  VK V  L                 +   
Sbjct: 60  VIALDVK---EEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDY 116

Query: 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336
               L + G ++  G      +   T   I  ++S +G  +  +       E   ++   
Sbjct: 117 TPYLLGRMGRLIIVGYG--GELRFPTIRVISSEVSFEGSLVGNY------VELHELVT-- 166

Query: 337 LCLAREGK 344
             LA +GK
Sbjct: 167 --LALQGK 172

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 41.1 bits (95), Expect = 7e-05
 Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 33/194 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            A V   +G      ++  L   + + ++V VK++A  +  +D+   +  YPV    PAV
Sbjct: 5   IAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL--PAV 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-------------------------GTW 143
            G+EG G + ++G  VT L  GD V+ S                              + 
Sbjct: 60  LGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSE 119

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203
            ++ +                  AT  ++       +         D +V+  A   + Q
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDF---PFDQLVKFYAFDEINQ 176

Query: 204 CIIQIARHRGIHSI 217
             I   +   +  I
Sbjct: 177 AAIDSRKGITLKPI 190

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           M   + A+V E+   P   +   E    ++    + V++L+A +  SD++   G  P R 
Sbjct: 1   MGLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP-RV 56

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDW 132
            +P + G+EG G V  V      L     
Sbjct: 57  PLPIILGHEGAGRVVEVNGEKRDLNGELL 85

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 14/160 (8%)

Query: 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
              +   A ++   +T    L  +     G  +   G        +  +           
Sbjct: 3   QEQLAAVAPLLCAGITTYSPLRHWQ-AGPGKKVGVVGIG-----GLGHMGIKLAHAMGAH 56

Query: 220 IRDRAGSDEAKEKLKGLGADEVF--TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
           +     S+  +E  K LGADEV     +     ++K     L   A   N          
Sbjct: 57  VVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLD------DF 110

Query: 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL 317
              L + GTM   G  +    +      I K  ++ G  +
Sbjct: 111 TTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMI 150

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV       P   ++ +++   E   NDV +++    +  SD++++   +         
Sbjct: 2   KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           G    VG V +VG  V + APGD V               +D    +
Sbjct: 59  GHEI-VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENY 104

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K             +  IE         D  V+ LA     SDI+ +        K   +
Sbjct: 2   KGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRK-NMI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP 137
            G+E VGEV  VGS V    PGD VI   
Sbjct: 57  LGHEAVGEVVEVGSEVKDFKPGDRVIVPC 85

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	378
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.91
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.7
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.68
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.59
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.08
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.08
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.99
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.89
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.84
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.82
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.78
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.75
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.7
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.69
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.65
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.63
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.62
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.62
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.62
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.61
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.6
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.6
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.6
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.58
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.57
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.57
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.55
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.51
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.5
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.47
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.46
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.46
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.46
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.45
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.44
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.44
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.44
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.44
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.43
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.43
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.43
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.43
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.42
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.39
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.37
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.36
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.35
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.33
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.33
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.33
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.33
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.26
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.25
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.24
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.23
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.22
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.21
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.17
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.16
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.16
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.09
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.09
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.08
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.06
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.04
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.02
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.02
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.0
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.98
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.94
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.92
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.91
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.84
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.75
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.69
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.69
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.68
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.66
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.59
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.59
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.58
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.54
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.53
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.48
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.42
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.37
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.33
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.32
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.31
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.28
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.23
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.21
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.2
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.2
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.17
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.12
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.05
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.99
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.98
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.93
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.92
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.89
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.88
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.87
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.83
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.8
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.71
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.66
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.62
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.59
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.54
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.52
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.5
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.44
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.39
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.39
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.38
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.37
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.36
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.33
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.3
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.28
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.25
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	95.11
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.06
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.98
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.95
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	94.94
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.93
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.92
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.89
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	94.86
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.83
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.79
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.73
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.68
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.67
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.59
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.58
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.5
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.38
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.33
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.16
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.03
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.94
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.94
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.89
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.86
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.84
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.83
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.82
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	93.69
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.63
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.48
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.47
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.43
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.36
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.34
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.31
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.3
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.29
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.2
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.08
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.98
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.95
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.84
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.76
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.75
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.56
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.56
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.53
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.34
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.22
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.1
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	91.99
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	91.88
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	91.81
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.68
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.68
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.68
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.61
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.59
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.45
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.44
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.13
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.11
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	91.04
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.89
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.75
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	90.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.48
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.33
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.27
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	90.17
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.04
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.99
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	89.85
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.82
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.81
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.66
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	89.65
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.64
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	89.59
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.44
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	89.43
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.36
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.1
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	89.05
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	89.04
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.99
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.94
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.78
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.76
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.6
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	88.53
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.47
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	88.45
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.27
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.22
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.02
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.92
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.91
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	87.89
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.87
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	87.8
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.74
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.74
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.62
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.34
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	86.95
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	86.56
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	86.17
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	86.13
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.08
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	86.05
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	85.58
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	85.55
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.54
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	85.42
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.35
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.29
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.09
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	84.9
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	84.8
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	84.78
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	84.67
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	84.63
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.63
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	84.55
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.53
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	84.22
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	84.2
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	83.78
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	83.65
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	83.37
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.33
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	83.32
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	82.99
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	82.83
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.59
d1v7ca_	351	Threonine synthase {Thermus thermophilus [TaxId: 2	82.47
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.36
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	82.2
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.84
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	81.82
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	81.5
d1ve1a1	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.26
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	81.15
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.0
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	80.79
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	80.75
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	80.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	80.09

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=216.93  Aligned_cols=148  Identities=20%  Similarity=0.260  Sum_probs=138.3

Q ss_pred             ccceEEEcccCCCccceEEe-eeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .||++.+++++++.. +++. +.+.|.+++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus         2 ~MkAv~~~~~G~p~~-l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEV-LKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEEESSCSSGGG-EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             ceeEEEEEccCCcce-EEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceee
Confidence            589999999998865 7774 68999999999999999999999999999998877767899999999999999999999


Q ss_pred             CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      +|++||||++....+|+|+||+++++++++++|+++++++||+++++.+|+|+++...+....|+++||+
T Consensus        81 ~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          81 AFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999887789999999999999999999999999999999999999999988999999999985

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2e-30  Score=216.01  Aligned_cols=148  Identities=26%  Similarity=0.352  Sum_probs=132.5

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      .+|.||||+++++++++   ++++++|.|.++++||+|||.++|+|++|++.+.|.++....+|.++|||++|+|+++|+
T Consensus         1 ~~P~tMkA~v~~~~g~p---l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~   77 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGS   77 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECT
T ss_pred             CcchhcEEEEEEeCCCC---CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCC
Confidence            37899999999999876   788999999999999999999999999999999998877667899999999999999999


Q ss_pred             CCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHH
Q 017064          123 AVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t  175 (378)
                      +++++++||||+..+.                           .+|+|+||+++++++++++|++++++.++++..++.|
T Consensus        78 ~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          78 GVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             CccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            9999999999986431                           1579999999999999999999999988888888889


Q ss_pred             HHHHHHHHhccCCCCEEEEe
Q 017064          176 ALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~  195 (378)
                      +++.++  +...+|++|||+
T Consensus       158 ~~~~~~--~g~~~G~~VLVl  175 (175)
T d1llua1         158 ILDQMR--AGQIEGRIVLEM  175 (175)
T ss_dssp             HHHHHH--TTCCSSEEEEEC
T ss_pred             HHHHHH--hCCCCCCEEEeC
Confidence            988875  334579999985

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=2.4e-30  Score=216.09  Aligned_cols=146  Identities=24%  Similarity=0.272  Sum_probs=127.5

Q ss_pred             ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCC--CCCCccCCCceeEEEEEecCCC
Q 017064           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +|+|+ +.++++    +++++++.|+++++||+||+.++|||++|++.+.+.....  .+.|+++|||++|+|+++|+++
T Consensus         2 ~maAV-l~g~~~----l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v   76 (178)
T d1e3ja1           2 NLSAV-LYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   76 (178)
T ss_dssp             CEEEE-EEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             ceEEE-EEcCCc----EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCccc
Confidence            34454 556654    8999999999999999999999999999999888654322  2578999999999999999999


Q ss_pred             CCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHH
Q 017064          125 TRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL  177 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  177 (378)
                      ++|++||||+..+.                           .+|+|+||+++++++++++|++++++++++++.++.|||
T Consensus        77 ~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (178)
T d1e3ja1          77 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV  156 (178)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHH
T ss_pred             CCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHH
Confidence            99999999986431                           258999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCEEEEeCCC
Q 017064          178 RMLEDFTTLNSGDSIVQNGAT  198 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~  198 (378)
                      +++.. +++++|++|+|+|+.
T Consensus       157 ~a~~~-~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         157 DAFEA-ARKKADNTIKVMISC  176 (178)
T ss_dssp             HHHHH-HHHCCTTCSEEEEEC
T ss_pred             HHHHH-hCCCCCCEEEEEccc
Confidence            99864 899999999999873

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=3.5e-29  Score=211.10  Aligned_cols=182  Identities=38%  Similarity=0.612  Sum_probs=158.0

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe-CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~-g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      +|+++||+++++++|||++|.+.+++++|++|+|+ |++|++|++++|+||++|++||++++..+..+++.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            58999999999999999999998999999988886 78899999999999999999999998776778888999999999


Q ss_pred             EEEccCccc----HHHHHHHh--cCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEE
Q 017064          240 EVFTESQLE----VKNVKGLL--ANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLK  313 (378)
Q Consensus       240 ~vi~~~~~~----~~~i~~~~--~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  313 (378)
                      +++++++.+    .+.+++.+  .+. ++|++|||+|++.+..++++|+++|+++.+|...+.+.+++...++.|++++.
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~-~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGG-EAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTC-CEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccC-CceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            999886532    23344443  233 49999999999999999999999999999998777778889999999999999


Q ss_pred             EEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          314 GFWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      |+++..|.. .+++...+.++++++++++|+
T Consensus       160 G~~~~~~~~-~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         160 GFWVTELLK-NNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             ECCHHHHHT-TCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEehHhhh-hCHHHHHHHHHHHHHHHHcCC
Confidence            998877644 467778899999999999985

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.3e-29  Score=200.99  Aligned_cols=143  Identities=22%  Similarity=0.332  Sum_probs=128.0

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  128 (378)
                      +++.++.+|.++. +++++.+.|.+++|||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~i~~~~~G~pe~-l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   79 (147)
T d1qora1           2 TRIEFHKHGGPEV-LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIK   79 (147)
T ss_dssp             EEEEBSSCCSGGG-CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             eEEEEcccCCCce-eEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceeeeeeeccccc
Confidence            5678899999864 999999999999999999999999999999999998764 36899999999999999999999999


Q ss_pred             CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhh--hhhccccHHHHHHHHHHHhccCCCCEEEE
Q 017064          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY--AATIIVNPLTALRMLEDFTTLNSGDSIVQ  194 (378)
Q Consensus       129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~VlV  194 (378)
                      +||||+......|+|+||++++.+.++++|+++++++  ++++++...++++++.+ .++++|++|||
T Consensus        80 vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          80 AGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             ccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            9999987666679999999999999999999998874  45567777788888876 78999999998

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5.9e-29  Score=208.93  Aligned_cols=179  Identities=23%  Similarity=0.274  Sum_probs=155.0

Q ss_pred             hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      +|||+++++++|||+++.+.+++++||+|||+|++|++|++++|+|++.|++|++++    .++++.+.++++|++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~----~~~~~~~~l~~~Ga~~vi~   76 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA----GSDAKREMLSRLGVEYVGD   76 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE----SSHHHHHHHHTTCCSEEEE
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeee----ccccccccccccccccccc
Confidence            479999999999999999988999999999999999999999999999999999999    4788899999999999999


Q ss_pred             cCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhc
Q 017064          244 ESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLS  322 (378)
Q Consensus       244 ~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (378)
                      +++.+ .+++++.+++.| +|++|||+|++.++.++++++++|+++.+|.....+........+.+++++.++....++.
T Consensus        77 ~~~~~~~~~v~~~t~~~g-~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          77 SRSVDFADEILELTDGYG-VDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             TTCSTHHHHHHHHTTTCC-EEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             CCccCHHHHHHHHhCCCC-EEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            88765 478999998877 9999999999999999999999999999986554433333344557899999988765533


Q ss_pred             cccHHHHHHHHHHHHHHHHcCCcccc
Q 017064          323 SEKATECRNMIDYLLCLAREGKLKYD  348 (378)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~g~~~~~  348 (378)
                       ..+....+.++++.+++++|++++.
T Consensus       156 -~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         156 -LQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             -HCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             -cCHHHHHHHHHHHHHHHHCCCCcee
Confidence             3566778899999999999999973

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-28  Score=204.40  Aligned_cols=152  Identities=25%  Similarity=0.364  Sum_probs=137.8

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||+++++++|||++|.+.+++++|++|||+|++|++|++++|+|+++|++|++++    .++++.+.++++|+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~   76 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA----GTEEGQKIVLQNGAHE   76 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccc----ccccccccccccCccc
Confidence            589999999999999999999888999999999999999999999999999999999999    5788999999999999


Q ss_pred             EEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechh
Q 017064          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK  319 (378)
Q Consensus       241 vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (378)
                      ++|+++.+ .+.+++.+++.+ +|++|||+|++.++.++++++++|+++.+|...  +.++++..++.+++++.|+++++
T Consensus        77 vi~~~~~~~~~~i~~~t~~~g-~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~--~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          77 VFNHREVNYIDKIKKYVGEKG-IDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             EEETTSTTHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS--CEEECTHHHHTTTCEEEECCGGG
T ss_pred             ccccccccHHHHhhhhhccCC-ceEEeecccHHHHHHHHhccCCCCEEEEEecCC--CCCCCHHHHHHCCCEEEEEEecC
Confidence            99998765 477889998877 999999999988899999999999999998533  45677888899999999997654

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=3.3e-29  Score=203.27  Aligned_cols=147  Identities=20%  Similarity=0.128  Sum_probs=131.8

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      +++|||+++..++++.. +++++++.|++++|||+|||+++|||++|+..+.|.++...+.|+++|+|++|+|++  .++
T Consensus         1 m~~~KA~v~~~~~~~~~-~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~   77 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFT-AGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQH   77 (152)
T ss_dssp             CCEEEEEEEEEETTEEE-EEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCS
T ss_pred             CCceEEEEEEecCCceE-EEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCC
Confidence            35799999999998764 778999999999999999999999999999999998877667899999999999998  567


Q ss_pred             CCCCCCCEEeeCCCC-----CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeC
Q 017064          125 TRLAPGDWVIPSPPS-----SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g  196 (378)
                      +.|++||+|++....     +|+|+||+++|+++++++|+++|. +||+++++++|+|.++...++++ |++|||+|
T Consensus        78 ~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          78 PRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             SSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            889999999876432     689999999999999999999984 78889999999999998878886 99999986

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=8.1e-29  Score=210.08  Aligned_cols=148  Identities=22%  Similarity=0.232  Sum_probs=134.0

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      .+.++||+++..++.+   ++++|++.|.|++|||+|||.++|+|++|++.+.|..... .+|.++|||++|+|+++|++
T Consensus         5 ~~~~~kAav~~~~~~p---l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~-~~p~i~GhE~~G~v~~vG~~   80 (199)
T d1cdoa1           5 KVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD-GFPVVLGHEGAGIVESVGPG   80 (199)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT-SCSEECCCCEEEEEEEECTT
T ss_pred             CceEEEEEEEecCCCC---cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc-ccccccccccceEEEEEcCC
Confidence            3456789999999877   8899999999999999999999999999999999865443 68999999999999999999


Q ss_pred             CCCCCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEE
Q 017064          124 VTRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~  156 (378)
                      +++|++||||+..+..                                               .|+|+||++++++.+++
T Consensus        81 v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~  160 (199)
T d1cdoa1          81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (199)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             CceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEE
Confidence            9999999999875431                                               28999999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      +|+++++++++++.+++.|++.++......+.|++|||+
T Consensus       161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999999999988889999999985

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=6.7e-29  Score=205.25  Aligned_cols=151  Identities=22%  Similarity=0.269  Sum_probs=129.9

Q ss_pred             CCHhhhhhccccHHHHHHHHH---HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      +|++|||+++++++|||++++   +.+..++|++|||+|++|++|.+++|+||+.|++|++++    +++++.++++++|
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~----~s~~k~~~~~~lG   76 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEAST----GKAAEHDYLRVLG   76 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCTTCHHHHHHTT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEec----CchHHHHHHHhcc
Confidence            689999999999999997754   457788999999999999999999999999999999999    5788899999999


Q ss_pred             CcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          238 ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       238 a~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +++++|+++.+.+ ..+.+++.| +|+|||++|++.+..++++|+++|+++.+|...+...+++...++.|++++.|++.
T Consensus        77 a~~vi~~~~~~~~-~~~~~~~~g-vD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~  154 (176)
T d1xa0a2          77 AKEVLAREDVMAE-RIRPLDKQR-WAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDS  154 (176)
T ss_dssp             CSEEEECC----------CCSCC-EEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCS
T ss_pred             cceeeecchhHHH-HHHHhhccC-cCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeC
Confidence            9999998776533 344555545 99999999999999999999999999999988777788999999999999999754

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1.5e-28  Score=203.97  Aligned_cols=143  Identities=25%  Similarity=0.353  Sum_probs=123.6

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |||++++.++++   +++++++.|.+++|||+|||+++|||++|++.+.+.......+|.++|||++|+|+++|++++++
T Consensus         1 MkA~v~~~~g~p---l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~   77 (171)
T d1rjwa1           1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHL   77 (171)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             CeEEEEecCCCC---cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCc
Confidence            899999998876   88999999999999999999999999999999987766666789999999999999999999999


Q ss_pred             CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||||+..+.                           .+|+|+||+++++++++++|++++++.|++ . ...++++.+
T Consensus        78 ~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~-~~~~~~~~~  155 (171)
T d1rjwa1          78 KVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-E-KINEVFDRM  155 (171)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-G-GHHHHHHHH
T ss_pred             eeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHH-H-HHHHHHHHH
Confidence            99999975331                           148999999999999999999999876654 3 356777777


Q ss_pred             HHHhccCCCCEEEEeCC
Q 017064          181 EDFTTLNSGDSIVQNGA  197 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~  197 (378)
                      .+ +.+ +|++|||.|.
T Consensus       156 ~~-~~~-~G~tVlViG~  170 (171)
T d1rjwa1         156 LK-GQI-NGRVVLTLED  170 (171)
T ss_dssp             HT-TCC-SSEEEEECCC
T ss_pred             Hh-cCC-CCCEEEEeCC
Confidence            54 555 5999999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.2e-28  Score=206.96  Aligned_cols=150  Identities=19%  Similarity=0.191  Sum_probs=129.7

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      ..|.+||++.+..+++..+ +++.+++.++++++||+||+.++|||++|++.+.|.++.. ++|+++|||++|+|+++|+
T Consensus         2 ~~P~~~ka~~~~~~~~~~~-~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~-~~P~i~GHE~~G~Vv~vG~   79 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKN-PKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM-KMPLVVGHEIVGKVVKLGP   79 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTS-CEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC-CSSEECCCCEEEEEEEECT
T ss_pred             CCCceeEEEEEeCCCcCCc-ceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCC-CCCcCcccccccchhhccc
Confidence            4688999999999988765 7888888778899999999999999999999999887643 6899999999999999999


Q ss_pred             CC-CCCCCCCEEeeCCC----------------------------------CCcccccceeccCCceEEcCCCCCHhhhh
Q 017064          123 AV-TRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (378)
Q Consensus       123 ~v-~~~~~Gd~V~~~~~----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa  167 (378)
                      ++ +.+++||||...+.                                  .+|+|+||+++++++++++|+++++++|+
T Consensus        80 ~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aa  159 (192)
T d1piwa1          80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLP  159 (192)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEE
T ss_pred             ccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHH
Confidence            98 66999999964320                                  15899999999999999999999998876


Q ss_pred             hccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          168 TIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      .+.....|||+++.. +++++|++|||.
T Consensus       160 l~~~~~~ta~~~l~~-~~vk~g~~Vvv~  186 (192)
T d1piwa1         160 VGEAGVHEAFERMEK-GDVRYRFTLVGY  186 (192)
T ss_dssp             SSHHHHHHHHHHHHH-TCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHH-hCCCCCCEEEEE
Confidence            655446789999975 999999999986

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=2.1e-28  Score=202.37  Aligned_cols=141  Identities=23%  Similarity=0.346  Sum_probs=126.3

Q ss_pred             ceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064           49 KAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        49 ~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      ||+++..++++   +++++++.|++ +++||+|||.++|||++|++.+.|..+.  .+++|+++|||++|+|+++|++++
T Consensus         1 kA~~~~~~g~p---l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~   77 (171)
T d1h2ba1           1 KAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   77 (171)
T ss_dssp             CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CEEEEEeCCCC---CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCC
Confidence            68899999987   78899999986 6899999999999999999999887643  235799999999999999999999


Q ss_pred             CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (378)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~  179 (378)
                      ++++||||++.+.                          .+|+|+||+++++++++++|++++++.++++..++.|||++
T Consensus        78 ~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a  157 (171)
T d1h2ba1          78 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER  157 (171)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred             cCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence            9999999987542                          15899999999999999999999999899898999999999


Q ss_pred             HHHHhccCCCCEEEE
Q 017064          180 LEDFTTLNSGDSIVQ  194 (378)
Q Consensus       180 l~~~~~~~~g~~VlV  194 (378)
                      +.. +++ .|++|||
T Consensus       158 l~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         158 LEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHT-TCC-SSEEEEE
T ss_pred             HHh-cCC-CCCEEEe
Confidence            975 788 8999998

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.2e-28  Score=193.85  Aligned_cols=131  Identities=26%  Similarity=0.338  Sum_probs=121.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||+++++.++++   +++.+.+.|.++++||+||++++|||++|++...|.++....+|+++|||++|+|          
T Consensus         1 MkA~~~~~~G~~---l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV----------   67 (131)
T ss_dssp             CEEEEECSTTSC---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE----------
T ss_pred             CcEEEEccCCCC---CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee----------
Confidence            899999999876   7889999999999999999999999999999999988777789999999999999          


Q ss_pred             CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                       +||+|+++.. +|+|+||++++++.++++|+++++++||++++++.|||++|.+.+  +.|++||++
T Consensus        68 -vGd~V~~~~~-~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 -EGRRYAALVP-QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             -TTEEEEEECS-SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             -ccceEEEEec-cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence             3999998876 599999999999999999999999999999999999999998765  459999874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.2e-27  Score=200.04  Aligned_cols=176  Identities=21%  Similarity=0.262  Sum_probs=148.6

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||+++++++|||++|.+.+++++||+|||+|++|++|++++|+|++.|++|++++    .+++|.+.++++|+++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~----~s~~k~~~~~~lGa~~   76 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV----GTAQKAQSALKAGAWQ   76 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEE----SSHHHHHHHHHHTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecc----cchHHHHHHHhcCCeE
Confidence            589999999999999999999988999999999999999999999999999999999998    5899999999999999


Q ss_pred             EEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhc-CceEEEEech
Q 017064          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFWLQ  318 (378)
Q Consensus       241 vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~  318 (378)
                      ++|+++.+ .+++++++++.+ +|+++|++|++.+..++.+++++|+++.++.....+...+...+..+ .+.+....+.
T Consensus        77 vi~~~~~d~~~~v~~~t~g~g-~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~  155 (179)
T d1qora2          77 VINYREEDLVERLKEITGGKK-VRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQ  155 (179)
T ss_dssp             EEETTTSCHHHHHHHHTTTCC-EEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHH
T ss_pred             EEECCCCCHHHHHHHHhCCCC-eEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEe
Confidence            99998765 578999998876 99999999999999999999999999999877766666665555444 3444333333


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcC
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      .+.  ..++...+.++++++++++|
T Consensus       156 ~~~--~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         156 GYI--TTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHC--CSHHHHHHHHHHHHHHHHTT
T ss_pred             eec--CCHHHHHHHHHHHHHHHHCc
Confidence            221  23556677888899999887

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=4e-28  Score=200.98  Aligned_cols=166  Identities=23%  Similarity=0.315  Sum_probs=133.8

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||+++++++|||+++.+ +++++||+|||+|++|++|++++|+||++|++|++++    .++++.+.++++|+++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~----~~~~~~~~~~~lGa~~   75 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA----SRPEKLALPLALGAEE   75 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE----SSGGGSHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccc----ccccccccccccccce
Confidence            5899999999999999999976 8999999999999999999999999999999999998    4678889999999999


Q ss_pred             EEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhh
Q 017064          241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKW  320 (378)
Q Consensus       241 vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (378)
                      ++|+.+    ...+.+.+.| +|+||||+| +.+..++++++++|+++.+|..++.+.++++..++.|++++.|+++..+
T Consensus        76 ~i~~~~----~~~~~~~~~g-~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          76 AATYAE----VPERAKAWGG-LDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             EEEGGG----HHHHHHHTTS-EEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             eeehhh----hhhhhhcccc-ccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcCh
Confidence            998764    3445556655 999999988 5788999999999999999977666677888899999999999988765


Q ss_pred             hccccHHHHHHHHHHHHHH
Q 017064          321 LSSEKATECRNMIDYLLCL  339 (378)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~  339 (378)
                      ..  .++...+.+..++.+
T Consensus       150 ~~--~~~~~~~~~~~l~p~  166 (171)
T d1iz0a2         150 LR--EGALVEEALGFLLPR  166 (171)
T ss_dssp             TT--CHHHHHHHHHHHGGG
T ss_pred             hh--hHHHHHHHHHHHHHH
Confidence            32  233344444444433

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=4.1e-28  Score=204.98  Aligned_cols=146  Identities=25%  Similarity=0.278  Sum_probs=131.9

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .+|||+++..++++   ++++++|.|+|+++||||||.++|||++|++++.|.++.. ++|+++|||++|+|+++|++|+
T Consensus         5 ~~~kAav~~~~g~~---l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~-~~p~v~GhE~~G~V~~vG~~V~   80 (197)
T d2fzwa1           5 IKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG-CFPVILGHLGAGIVESVGEGVT   80 (197)
T ss_dssp             EEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC-CSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc-cccccCCcceeeEEEeecCCce
Confidence            46899999999987   8899999999999999999999999999999999976543 6899999999999999999999


Q ss_pred             CCCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEEcC
Q 017064          126 RLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKVS  158 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~iP  158 (378)
                      ++++||+|+..+..                                               .|+|+||+++++.+++++|
T Consensus        81 ~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence            99999999865321                                               2899999999999999999


Q ss_pred             CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      +++++++++++++++.|++.++..+...+.+++|||.
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999999776666788999884

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=1.1e-27  Score=201.57  Aligned_cols=144  Identities=26%  Similarity=0.330  Sum_probs=125.7

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .+|+++++...+.+   ++++++|.|+|+++||+|||.++|||++|++++.|.++.  ++|+++|||++|+|+++|++++
T Consensus         2 k~~~Aav~~~~g~~---l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             EEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCC
T ss_pred             ceeEEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc--cCCcccccceEEEeeecCccce
Confidence            46899999998876   899999999999999999999999999999999998764  5899999999999999999999


Q ss_pred             CCCCCCEEeeCCCC------------------------------------------------CcccccceeccCCceEEc
Q 017064          126 RLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHKV  157 (378)
Q Consensus       126 ~~~~Gd~V~~~~~~------------------------------------------------~G~~~~~~~~~~~~~~~i  157 (378)
                      +|++||||+..+..                                                .|+|+||+++++.+++++
T Consensus        77 ~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          77 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             eEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            99999999753210                                                268999999999999999


Q ss_pred             CCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       158 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      |++++++++                         +++.|+ |++|++|+|+|+.+|++.++.+
T Consensus       157 p~~i~~~~~-------------------------~~i~g~-g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL-------------------------VKFYAF-DEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG-------------------------EEEEEG-GGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCcccE-------------------------EEEeCc-HHHHHHHHHHHHHcCCCEEEEe
Confidence            999886543                         344555 9999999999999999877765

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.95  E-value=3.9e-27  Score=197.32  Aligned_cols=168  Identities=26%  Similarity=0.368  Sum_probs=145.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ++++++++|||++|.+.+++++||+|||+|++|++|++++|+||..|++||+++    +++++.++++++|+++++++++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~----~~~~~~~~~~~~Ga~~vi~~~~   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA----GSDEKIAYLKQIGFDAAFNYKT   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeC----CCHHHHHHHHhhhhhhhccccc
Confidence            567788999999999999999999999999999999999999999999999999    5788999999999999999887


Q ss_pred             cc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCC------CCccccchhhhhcCceEEEEechh
Q 017064          247 LE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSK------KPITVSTSAFIFKDLSLKGFWLQK  319 (378)
Q Consensus       247 ~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  319 (378)
                      ++ .+.+.+.+.+.| +|+||||+|++.++.++++++++|+++.+|..+.      .+..+++..++.|++++.|++...
T Consensus        84 ~~~~~~~~~~~~~~G-vd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          84 VNSLEEALKKASPDG-YDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             CSCHHHHHHHHCTTC-EEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             ccHHHHHHHHhhcCC-CceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence            65 566777877766 9999999999999999999999999999985432      123345567889999999987765


Q ss_pred             hhccccHHHHHHHHHHHHHHHHcC
Q 017064          320 WLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      |    .++...+.++++.+++++|
T Consensus       163 ~----~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 W----QGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             C----CHHHHHHHHHHHHHHHHTT
T ss_pred             c----ChHHHHHHHHHHHHHHhCc
Confidence            5    4556678899999999886

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.5e-28  Score=202.59  Aligned_cols=144  Identities=25%  Similarity=0.262  Sum_probs=123.1

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ++|++++++.+++    +++++++.|+++++||+|||.++|||++|++.+.+....  ..++|+++|||++|+|+++|++
T Consensus         6 p~~~a~V~~gp~~----l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~   81 (185)
T d1pl8a1           6 PNNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS   81 (185)
T ss_dssp             CCCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTT
T ss_pred             CCCEEEEEeCCCe----EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccc
Confidence            3578999998875    899999999999999999999999999999998764321  2357899999999999999999


Q ss_pred             CCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064          124 VTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      +++|++||||+..+.                           .+|+|+||++++.++++++|+++++++|++++  ..+|
T Consensus        82 v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a  159 (185)
T d1pl8a1          82 VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKA  159 (185)
T ss_dssp             CCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGH
T ss_pred             eeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHH
Confidence            999999999986431                           25789999999999999999999999988776  3456


Q ss_pred             HHHHHHHhccCCCCEEEEeCC
Q 017064          177 LRMLEDFTTLNSGDSIVQNGA  197 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~  197 (378)
                      ++++.. .++++|++||| |+
T Consensus       160 ~~a~~~-~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         160 LEAFET-FKKGLGLKIML-KC  178 (185)
T ss_dssp             HHHHHH-HHTTCCSEEEE-EC
T ss_pred             HHHHHH-hCCCCCCEEEE-Ee
Confidence            777654 77899999999 44

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=7.6e-28  Score=204.84  Aligned_cols=146  Identities=25%  Similarity=0.295  Sum_probs=129.3

Q ss_pred             cCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (378)
Q Consensus        43 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~  122 (378)
                      ..+.||||+++..++.+   ++++++|.|.|+++||+|||.++|||++|++.+.|.++.  .+|+++|||++|+|+++|+
T Consensus         4 ~~~~~~KAaV~~~~g~p---l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~v~GHE~~G~V~~vG~   78 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA--LFPVVLGHECAGIVESVGP   78 (202)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC--CSSBCCCCEEEEEEEEECT
T ss_pred             CCeEEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc--ccccccccccceEEeeecC
Confidence            45678999999999886   889999999999999999999999999999999998764  5799999999999999999


Q ss_pred             CCCCCCCCCEEeeCCCC---------------------------------------------------CcccccceeccC
Q 017064          123 AVTRLAPGDWVIPSPPS---------------------------------------------------SGTWQSYVVKDQ  151 (378)
Q Consensus       123 ~v~~~~~Gd~V~~~~~~---------------------------------------------------~G~~~~~~~~~~  151 (378)
                      +|+++++||||++.+..                                                   .|+|+||+++++
T Consensus        79 ~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~  158 (202)
T d1e3ia1          79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE  158 (202)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             CceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEeh
Confidence            99999999999875421                                                   289999999999


Q ss_pred             CceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeC
Q 017064          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (378)
Q Consensus       152 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g  196 (378)
                      .+++++|++++++.+++..+++.+++.++..   +++|++|.|..
T Consensus       159 ~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         159 ANLARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             GGEEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             hhEEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            9999999999999989888888888888753   46899987753

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=3.5e-27  Score=196.25  Aligned_cols=142  Identities=24%  Similarity=0.301  Sum_probs=122.1

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      |+.+|||++++.++++   +++++++.|.++++||+|||.++|||++|++++.|.++.. ++|+++|||++|+|+++|++
T Consensus         1 m~~k~kA~v~~~~~~p---l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~-~~P~vlGHE~~G~V~~vG~~   76 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV-PLPIILGHEGAGRVVEVNGE   76 (184)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC-CSSBCCCCEEEEEEEEESSC
T ss_pred             CCceEEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc-ccccccceeeeeeeeEEecc
Confidence            5678999999999886   7889999999999999999999999999999999987654 68999999999999999999


Q ss_pred             CC-----CCCCCCEEeeCCC-----------------------------------CCcccccceecc-CCceEEcCCCCC
Q 017064          124 VT-----RLAPGDWVIPSPP-----------------------------------SSGTWQSYVVKD-QSVWHKVSKDSP  162 (378)
Q Consensus       124 v~-----~~~~Gd~V~~~~~-----------------------------------~~G~~~~~~~~~-~~~~~~iP~~~~  162 (378)
                      |+     .+++||+|+..+.                                   .+|+|+||++++ +.+++++|++++
T Consensus        77 v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~  156 (184)
T d1vj0a1          77 KRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKIT  156 (184)
T ss_dssp             CBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCC
T ss_pred             ccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCC
Confidence            86     4689999986321                                   158999999986 579999999999


Q ss_pred             HhhhhhccccHHHHHHHHHHHhccCCCCEEEEeC
Q 017064          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (378)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g  196 (378)
                      +++      +..+|++++.. +++++|++|||+.
T Consensus       157 ~~~------pl~~A~~a~~~-~~~~~G~~VlI~~  183 (184)
T d1vj0a1         157 HRL------PLKEANKALEL-MESREALKVILYP  183 (184)
T ss_dssp             EEE------EGGGHHHHHHH-HHHTSCSCEEEEC
T ss_pred             HHH------HHHHHHHHHHH-hCCCcCCEEEEee
Confidence            653      24467888865 8999999999974

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=3.5e-26  Score=189.89  Aligned_cols=171  Identities=18%  Similarity=0.192  Sum_probs=147.6

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      ++++.|++++|++.|||+++.+.+++++|++|+|+|+ |++|++++|+||++|++++++++   .+++|++.++++|+++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~---~~~~k~~~a~~~Ga~~   76 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVD---IVESRLELAKQLGATH   76 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHHHTCSE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeec---cHHHHHHHHHHcCCeE
Confidence            3577899999999999999988899999999999998 99999999999999998887776   4789999999999999


Q ss_pred             EEccCccc-HHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCC-CCCccccchhhhhcCceEEEEec
Q 017064          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       241 vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      ++|+++.+ .+++++++++  ++|+||||+|+. .++.+++.++++|+++.+|... ..+.++++..++.+++++.|+.+
T Consensus        77 ~i~~~~~~~~~~i~~~t~g--g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~  154 (174)
T d1f8fa2          77 VINSKTQDPVAAIKEITDG--GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE  154 (174)
T ss_dssp             EEETTTSCHHHHHHHHTTS--CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred             EEeCCCcCHHHHHHHHcCC--CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEe
Confidence            99988765 4678888887  499999999985 5688999999999999998543 33467888899999999999876


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +++       ..+++++++++++++|+
T Consensus       155 g~~-------~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         155 GSG-------SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GGS-------CHHHHHHHHHHHHHTTS
T ss_pred             cCC-------ChHHHHHHHHHHHHcCC
Confidence            654       12466889999999985

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=1.1e-28  Score=202.28  Aligned_cols=152  Identities=18%  Similarity=0.159  Sum_probs=135.2

Q ss_pred             cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~  125 (378)
                      .+||+++++.+++... +++++++.|++++|||+|||+|+|||++|++.+.|.++.....|.++|+|++|+|++  +.+.
T Consensus         2 ~~~ka~~~~~~g~~~~-l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~   78 (162)
T d1tt7a1           2 TLFQALQAEKNADDVS-VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDP   78 (162)
T ss_dssp             CEEEEEEECCGGGSCC-CEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSST
T ss_pred             CcEEEEEEEecCCCeE-EEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--cccc
Confidence            5789999999998876 999999999999999999999999999999999998877667889999999999998  5678


Q ss_pred             CCCCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch
Q 017064          126 RLAPGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (378)
Q Consensus       126 ~~~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~  200 (378)
                      ++++||+|++...     .+|+|+||+++|+++++++|+++|+++||++++.++|||.++.. .....+++|||+|++|+
T Consensus        79 ~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1          79 RFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred             ccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence            8999999987653     26899999999999999999999999999999999999977654 45666788999998775


Q ss_pred             H
Q 017064          201 V  201 (378)
Q Consensus       201 ~  201 (378)
                      +
T Consensus       158 v  158 (162)
T d1tt7a1         158 V  158 (162)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=4.4e-26  Score=188.77  Aligned_cols=168  Identities=19%  Similarity=0.200  Sum_probs=144.4

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+.+||+++|+++|||+++.+ .++++||+|+|+|++|++|++++|+++++|++.+++++   .+++|+++++++|+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~-~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~---~~~~~~~~~~~~Ga~~   76 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD---VREEAVEAAKRAGADY   76 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEE---SSHHHHHHHHHHTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccceeeeeecccccccccccccc---cchhhHHHHHHcCCce
Confidence            5789999999999999999966 89999999999998899999999999999974444443   4789999999999999


Q ss_pred             EEccCccc-HHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       241 vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      ++++++.+ .+++++.+.+.+ +|++|||+|++. ++.++++++++|+++.+|.. ..+.+++...++.+++++.|+..+
T Consensus        77 ~i~~~~~~~~~~~~~~~~~~~-~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~i~i~Gs~~~  154 (170)
T d1jvba2          77 VINASMQDPLAEIRRITESKG-VDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF-GADLHYHAPLITLSEIQFVGSLVG  154 (170)
T ss_dssp             EEETTTSCHHHHHHHHTTTSC-EEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS-CCCCCCCHHHHHHHTCEEEECCSC
T ss_pred             eeccCCcCHHHHHHHHhhccc-chhhhcccccchHHHhhhhhcccCCEEEEeccc-cCccccCHHHHHhCCcEEEEEecC
Confidence            99988765 467888887766 999999999854 58899999999999999854 446778888899999999998765


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      ++          ++++++++++++|+
T Consensus       155 ~~----------~d~~~~l~lv~~GK  170 (170)
T d1jvba2         155 NQ----------SDFLGIMRLAEAGK  170 (170)
T ss_dssp             CH----------HHHHHHHHHHHTTS
T ss_pred             CH----------HHHHHHHHHHHcCC
Confidence            32          56888899999885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=1.2e-25  Score=186.28  Aligned_cols=166  Identities=20%  Similarity=0.247  Sum_probs=144.6

Q ss_pred             CHhhhhhccccHHHHHHHHHHHh-ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      .+.++|+++++++|||+++.+.. .+++|++|||+|+ |++|++++|+|+++|++++++++   .+++|++.++++|+++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~---~~~~k~~~~~~~ga~~   80 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALD---VKEEKLKLAERLGADH   80 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE---SSHHHHHHHHHTTCSE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCccccccc---chhHHHHHHhhcccce
Confidence            36789999999999999998855 4899999999998 99999999999999987766665   4789999999999999


Q ss_pred             EEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechh
Q 017064          241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK  319 (378)
Q Consensus       241 vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (378)
                      ++++++++.+.+.+.+.+.| +|+||||+|+. .++.++++++++|+++.+|..  .+.++++..++.+++++.|++.++
T Consensus        81 ~i~~~~~~~~~~~~~~~~~g-~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~--~~~~~~~~~l~~k~~~i~Gs~~~~  157 (172)
T d1h2ba2          81 VVDARRDPVKQVMELTRGRG-VNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG--GELRFPTIRVISSEVSFEGSLVGN  157 (172)
T ss_dssp             EEETTSCHHHHHHHHTTTCC-EEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS--SCCCCCHHHHHHTTCEEEECCSCC
T ss_pred             eecCcccHHHHHHHhhCCCC-ceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc--ccccCCHHHHHhCCcEEEEEEecC
Confidence            99998888888888888876 99999999986 579999999999999999953  346788888999999999998764


Q ss_pred             hhccccHHHHHHHHHHHHHHHHcCC
Q 017064          320 WLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +          ++++++++++++|+
T Consensus       158 ~----------~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 Y----------VELHELVTLALQGK  172 (172)
T ss_dssp             H----------HHHHHHHHHHHTTS
T ss_pred             H----------HHHHHHHHHHHcCC
Confidence            3          55788899999885

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=3.7e-26  Score=190.28  Aligned_cols=142  Identities=25%  Similarity=0.322  Sum_probs=118.2

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-------CCCCCccCCCceeEEEEEe
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------RPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~v  120 (378)
                      |||+++..++++   +++++++.|++++|||+|||.++|||++|++++.|.++.       ..++|+++|||++|+|+++
T Consensus         1 MKA~~~~~~G~p---l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~   77 (177)
T d1jvba1           1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (177)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEEeCCCC---CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeee
Confidence            899999999987   788999999999999999999999999999999987542       2258999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCCC--------------------------CcccccceeccCC-ceEEcCCCCCHhhhhhccccH
Q 017064          121 GSAVTRLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNP  173 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~~--------------------------~G~~~~~~~~~~~-~~~~iP~~~~~~~aa~~~~~~  173 (378)
                      |+++++|++||||++.+..                          +|+|+||++++.. .++++|+..+.+.|+....++
T Consensus        78 g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~  157 (177)
T d1jvba1          78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEA  157 (177)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGH
T ss_pred             ccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHH
Confidence            9999999999999875421                          4899999999765 466776666555544445578


Q ss_pred             HHHHHHHHHHhccCCCCEEEE
Q 017064          174 LTALRMLEDFTTLNSGDSIVQ  194 (378)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~VlV  194 (378)
                      .++++++.. .++ .|++|||
T Consensus       158 ~~a~~~~~~-~~~-~G~~VlI  176 (177)
T d1jvba1         158 NEAIDNLEN-FKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHHHT-TCC-CSEEEEE
T ss_pred             HHHHHHHHh-hcc-cCCceEC
Confidence            889998865 665 5899998

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=3.2e-28  Score=201.65  Aligned_cols=141  Identities=21%  Similarity=0.192  Sum_probs=114.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      ||++++.++++    ++++|.|.|.++++||+||+.++|||++|++.+.+..+.. ++|+++|||++|+|+++|+++++|
T Consensus         1 MKa~v~~~~~~----l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~-~~P~i~GhE~~G~V~~vG~~v~~~   75 (177)
T d1jqba1           1 MKGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD-RKNMILGHEAVGEVVEVGSEVKDF   75 (177)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCC-CSSEECCCCEEEEEEEECTTCCSC
T ss_pred             CeEEEEEeCCC----eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCC-CCCccCcceeeEEeeeccccccee
Confidence            89999999987    8999999999999999999999999999998876544332 579999999999999999999999


Q ss_pred             CCCCEEeeCCC-----------------------------CCcccccceeccC--CceEEcCCCCCHhhhhhccccHHHH
Q 017064          128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQ--SVWHKVSKDSPMEYAATIIVNPLTA  176 (378)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------~~G~~~~~~~~~~--~~~~~iP~~~~~~~aa~~~~~~~ta  176 (378)
                      ++||||+..+.                             .+|+|+||+++|.  .+++++|+++++++++...+..   
T Consensus        76 ~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~~---  152 (177)
T d1jqba1          76 KPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHG---  152 (177)
T ss_dssp             CTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEES---
T ss_pred             cCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHHH---
Confidence            99999985331                             1589999999986  4699999999998887665432   


Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~a  205 (378)
                      +..+        ++.+++.|+ |++|+.+
T Consensus       153 ~~~~--------~~~vlv~g~-gp~gl~a  172 (177)
T d1jqba1         153 FDHI--------EEALLLMKD-KPKDLIK  172 (177)
T ss_dssp             GGGH--------HHHHHHHHH-CCTTCSE
T ss_pred             HHHh--------cCceEEECC-CHHHhhe
Confidence            2222        234666666 6666543

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=4e-26  Score=182.93  Aligned_cols=130  Identities=15%  Similarity=0.117  Sum_probs=114.7

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |||++++.++++.. +++++++.|++++|||+|||.++|||++|.....|.++....+|.++|+|++|+|+++|.  +.+
T Consensus         1 MkA~v~~~~~~~~~-l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~   77 (146)
T d1o89a1           1 LQALLLEQQDGKTL-ASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRF   77 (146)
T ss_dssp             CEEEEEECC---CE-EEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTC
T ss_pred             CeEEEEEcCCCceE-EEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCc
Confidence            89999999988765 889999999999999999999999999999999998877767899999999999999766  579


Q ss_pred             CCCCEEeeCCCC-----CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064          128 APGDWVIPSPPS-----SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (378)
Q Consensus       128 ~~Gd~V~~~~~~-----~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l  180 (378)
                      ++||+|++....     +|+|+||+++|+++++++|+++|+++||++++++.||+..+
T Consensus        78 ~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          78 HAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             cceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999875532     69999999999999999999999999999998888886544

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=7.7e-29  Score=209.68  Aligned_cols=155  Identities=22%  Similarity=0.215  Sum_probs=128.4

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCC-------CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEV-------KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-------~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v  120 (378)
                      +|++++..++.    ++++|+|.|.+       .++||+|||.++|||++|++++.|.++.  ++|+++|||++|+|+++
T Consensus         2 ~kA~v~~~~~~----le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~--~~P~v~GHE~~G~Vv~v   75 (201)
T d1kola1           2 NRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEK   75 (201)
T ss_dssp             EEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEE
T ss_pred             cEEEEEeCCCc----eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc--ccceeccceeeeeeecc
Confidence            58999999885    89999998865       4699999999999999999999998765  58999999999999999


Q ss_pred             cCCCCCCCCCCEEeeCCC------------------------------------CCcccccceeccC--CceEEcCCCCC
Q 017064          121 GSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQ--SVWHKVSKDSP  162 (378)
Q Consensus       121 G~~v~~~~~Gd~V~~~~~------------------------------------~~G~~~~~~~~~~--~~~~~iP~~~~  162 (378)
                      |++|++|++||||+..+.                                    .+|+|+||+++|.  .++++||++.+
T Consensus        76 G~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~  155 (201)
T d1kola1          76 GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK  155 (201)
T ss_dssp             CTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred             ccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCC
Confidence            999999999999975421                                    1489999999985  47999999877


Q ss_pred             HhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 017064          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI  214 (378)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~  214 (378)
                      ..+++++.....++++++.. ...+.++    +|+ |++|+.++|+||++||
T Consensus       156 ~~~~~~~~~~~~~~~~a~~~-~~~~~g~----~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         156 AMEKINIAEVVGVQVISLDD-APRGYGE----FDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHTCCHHHHHTEEEECGGG-HHHHHHH----HHH-TCSCEEEECTTCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHh-CCCCCeE----Eee-CHHHHHHHHHHHHcCC
Confidence            77777666556666666644 4444443    476 9999999999999886

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=9e-26  Score=189.57  Aligned_cols=175  Identities=18%  Similarity=0.189  Sum_probs=132.0

Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCC--CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      ++|+...| ++++++|||++|.+.+++++|  ++|||+||+|++|++++|+||..|++++++++.  +.+++....+++|
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~--~~e~~~~l~~~~g   77 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG--TQEKCLFLTSELG   77 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES--SHHHHHHHHHHSC
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccc--hHHHHhhhhhccc
Confidence            35666654 677899999999998999987  899999999999999999999999987665532  2344455567899


Q ss_pred             CcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcccc---------chhhhh
Q 017064          238 ADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS---------TSAFIF  307 (378)
Q Consensus       238 a~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------~~~~~~  307 (378)
                      +++++|+.+++. +.+++.++ .| +|+|||++|++.+..++++++++|+++.+|..++.....+         ...+..
T Consensus        78 ad~vi~~~~~~~~~~~~~~~~-~G-vDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          78 FDAAVNYKTGNVAEQLREACP-GG-VDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             CSEEEETTSSCHHHHHHHHCT-TC-EEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             ceEEeeccchhHHHHHHHHhc-cC-ceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999999998765 45666664 45 9999999999999999999999999999996544221111         123566


Q ss_pred             cCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          308 KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      |++++.|+....+.     +...+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~-----~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYK-----DKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCG-----GGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchH-----HHHHHHHHHHHHHHHCcC
Confidence            89999998765542     234577899999999885

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=1.2e-28  Score=205.50  Aligned_cols=160  Identities=36%  Similarity=0.576  Sum_probs=136.1

Q ss_pred             cccceEEEcccCCCccceE--EeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC---------CCCccCCCcee
Q 017064           46 PPSKAVVYEREGPPDSVIK--MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPAVGGYEGV  114 (378)
Q Consensus        46 ~~~~a~~~~~~~~~~~~~~--~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~---------~~p~~~G~e~~  114 (378)
                      .|||++++.++++|.+.++  ..++|.|.++++||+|||++++||++|++.++|.++...         ..|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            5789999999998865444  456777889999999999999999999999988765432         36788999999


Q ss_pred             EEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH-HhccCCCCEEE
Q 017064          115 GEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED-FTTLNSGDSIV  193 (378)
Q Consensus       115 G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~Vl  193 (378)
                      |+|+++|.++..++.||+|.......|+|+||+++++++++++|++++...+  +++.++|||+++.. .+++++||+||
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vl  159 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELY  159 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHH
T ss_pred             cccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEE
Confidence            9999999999999999999988877899999999999999999998754444  45678899988764 35799999999


Q ss_pred             EeC-CCchHHHHHHH
Q 017064          194 QNG-ATSIVGQCIIQ  207 (378)
Q Consensus       194 V~g-~~g~~G~~av~  207 (378)
                      |.| |+|++|++++|
T Consensus       160 i~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         160 QDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHTGGGSCEEEE
T ss_pred             EECccchhhhheEEe
Confidence            998 55779998776

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=3.1e-25  Score=182.89  Aligned_cols=163  Identities=20%  Similarity=0.225  Sum_probs=138.2

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||+++|+++|||+++++ +++++|++|+|.|+ |++|++++|+||++|++|+++.    .+++|++.++++|+++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~-~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~----~~~~~~~~a~~~Ga~~   74 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQ-TNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAID----IDDAKLELARKLGASL   74 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceec----chhhHHHhhhccCccc
Confidence            5899999999999999999976 89999999999998 9999999999999999999888    5899999999999999


Q ss_pred             EEccCccc-HHHHHHHhcCCCCCcEEEeCCC-CccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVG-GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       241 vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      ++|+.+.+ .+.+++.+.+   +|.++++++ .+.++.++++++++|+++.+|.. ..+.+++...++.|++++.|++.+
T Consensus        75 ~i~~~~~~~~~~~~~~~~g---~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~~~i~Gs~~~  150 (166)
T d1llua2          75 TVNARQEDPVEAIQRDIGG---AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLP-PGDFPTPIFDVVLKGLHIAGSIVG  150 (166)
T ss_dssp             EEETTTSCHHHHHHHHHSS---EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCC-SSEEEEEHHHHHHTTCEEEECCSC
T ss_pred             cccccchhHHHHHHHhhcC---CcccccccccchHHHHHHHHhcCCcEEEEEEec-CCCccCCHHHHHhCCcEEEEEeec
Confidence            99988765 4556666654   555555555 46678999999999999999954 446778888999999999998765


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcC
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      +.          ++++++++++++|
T Consensus       151 ~~----------~d~~e~l~l~~~G  165 (166)
T d1llua2         151 TR----------ADLQEALDFAGEG  165 (166)
T ss_dssp             CH----------HHHHHHHHHHHTT
T ss_pred             CH----------HHHHHHHHHHHCc
Confidence            32          4578888999887

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=6.6e-25  Score=181.51  Aligned_cols=169  Identities=20%  Similarity=0.247  Sum_probs=140.0

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++||.++|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+|+++|++++++++   .+++|++.++++|++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d---~~~~r~~~a~~~Ga~~~   77 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAID---INGEKFPKAKALGATDC   77 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCSEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeec---cchHHHHHHHHhCCCcc
Confidence            578999999999999999988899999999999998 99999999999999997776665   47889999999999999


Q ss_pred             EccCcc--cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          242 FTESQL--EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       242 i~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +++...  ..+.+.+.+.+.| +|++|||+|.+ .+..++++++++ |+++.+|.. ..+.++++..++ .+.++.|+.+
T Consensus        78 i~~~~~~~~~~~~~~~~~~~G-~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~-~~~~~i~~~~~~-~~k~i~Gs~~  154 (174)
T d1e3ia2          78 LNPRELDKPVQDVITELTAGG-VDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VDEMTIPTVDVI-LGRSINGTFF  154 (174)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSC-BSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS-SSEEEEEHHHHH-TTCEEEECSG
T ss_pred             cCCccchhhhhhhHhhhhcCC-CcEEEEecccchHHHHHHHHhhcCCeEEEecCCC-CCccccchHHHh-ccCEEEEEEe
Confidence            987653  4566666666656 99999999995 568999999996 999999954 445666666655 3568889887


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +++       ...+++.++++++++|+
T Consensus       155 Gs~-------~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         155 GGW-------KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GGC-------CHHHHHHHHHHHHHTTS
T ss_pred             eCC-------ChHHHHHHHHHHHHCcC
Confidence            765       13466788889988875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=4.9e-25  Score=182.11  Aligned_cols=166  Identities=22%  Similarity=0.255  Sum_probs=141.4

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||+++++++|||++++. .++++|++|||+|+ |++|++++|+|++.|++|++++    .+++|+++++++|++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~-~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~----~~~~r~~~~k~~Ga~~   74 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD----IGDEKLELAKELGADL   74 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccC----CCHHHhhhhhhcCcce
Confidence            5899999999999999999986 89999999999987 9999999999999999988887    5899999999999999


Q ss_pred             EEccCcccH-HHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          241 VFTESQLEV-KNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       241 vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      ++++.+.+. +.+++.+.+   .|.+++++++ ..+..++++++++|+++.+|.. ..+.+++...++.+++++.|+..+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~-~~~~~~~~~~~~~~~~~i~gs~~~  150 (168)
T d1rjwa2          75 VVNPLKEDAAKFMKEKVGG---VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLP-PEEMPIPIFDTVLNGIKIIGSIVG  150 (168)
T ss_dssp             EECTTTSCHHHHHHHHHSS---EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC-SSEEEEEHHHHHHTTCEEEECCSC
T ss_pred             ecccccchhhhhcccccCC---CceEEeecCCHHHHHHHHHHhccCCceEecccc-cCCCCCCHHHHHHCCcEEEEEeeC
Confidence            999988765 457777765   4444455555 5679999999999999999854 456678888899999999998764


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcCCcc
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREGKLK  346 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~  346 (378)
                      .          +++++++++++++|++|
T Consensus       151 ~----------~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         151 T----------RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             C----------HHHHHHHHHHHHTTSCC
T ss_pred             C----------HHHHHHHHHHHHhCCCC
Confidence            2          25688899999999885

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.8e-25  Score=184.52  Aligned_cols=164  Identities=20%  Similarity=0.185  Sum_probs=136.5

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      +.+.||++.|++.|+|+++.+ +++++||+|+|+|+ |++|++++|+||++|++|+++.    .+++|++.++++|++++
T Consensus         2 p~e~AApl~cag~Ta~~al~~-~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~a~~lGa~~~   75 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVIS----RSSRKREDAMKMGADHY   75 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-hCcCCCCEEEEECC-CCcchhHHHHhhhccccccccc----cchhHHHHhhccCCcEE
Confidence            457789999999999999986 89999999999998 9999999999999999999887    47788999999999999


Q ss_pred             EccCcccHHHHHHHhcCCCCCcEEEeCCCCc---cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          242 FTESQLEVKNVKGLLANLPEPALGFNCVGGN---SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       242 i~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      +++.+.. +..++. .+  ++|+++||++..   .+..++++++++|+++.+|.. ..+..++...++.|++++.|+..+
T Consensus        76 i~~~~~~-~~~~~~-~~--~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          76 IATLEEG-DWGEKY-FD--TFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP-EQHEMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             EEGGGTS-CHHHHS-CS--CEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC-CSSCCEEECGGGCBSCEEEECCCC
T ss_pred             eeccchH-HHHHhh-hc--ccceEEEEecCCccchHHHHHHHhhccceEEEeccc-cccccccHHHHHhCCcEEEEEeeC
Confidence            9876542 112222 22  499999998863   367899999999999999954 445677888899999999998765


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcCCcc
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREGKLK  346 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~  346 (378)
                      +.          +.++++++|+++|++|
T Consensus       151 ~~----------~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 SI----------KELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CH----------HHHHHHHHHHHHTTCC
T ss_pred             CH----------HHHHHHHHHHHhCCCC
Confidence            32          5688899999999885

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.92  E-value=1.1e-25  Score=190.51  Aligned_cols=144  Identities=28%  Similarity=0.339  Sum_probs=121.7

Q ss_pred             CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      ...+|||+++..++++   +++++++.|.|+++||+|||.++|||++|++.+.|.++.  ++|+++|||++|+|+++|++
T Consensus         5 ~~~k~KAavl~~~~~~---l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv~vG~~   79 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEG   79 (198)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTT
T ss_pred             CceEEEEEEEecCCCC---CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEEecCcc
Confidence            4557899999988876   889999999999999999999999999999999998765  58999999999999999999


Q ss_pred             CCCCCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEE
Q 017064          124 VTRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHK  156 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~  156 (378)
                      ++++++||||+..+..                                               .|+|+||+++++.++++
T Consensus        80 v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~  159 (198)
T d2jhfa1          80 VTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAK  159 (198)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEE
T ss_pred             ccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEE
Confidence            9999999999875421                                               27999999999999999


Q ss_pred             cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (378)
Q Consensus       157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~  195 (378)
                      +|+.++++.+++..++..+...+.   ..+.+|++|.|.
T Consensus       160 ~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi  195 (198)
T d2jhfa1         160 IDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTI  195 (198)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred             CCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence            999999877766555443333222   346789998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=1.2e-24  Score=181.95  Aligned_cols=166  Identities=19%  Similarity=0.315  Sum_probs=136.5

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +++.+|++.|++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .+++|++.++++|+++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~   76 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIA----GSPNRLKLAEEIGADL   76 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccc----cccccccccccccceE
Confidence            467789999999999999998889999999999998 9999999999999999 567766    5899999999999999


Q ss_pred             EEccCcccH----HHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCC-CCCccccc-hhhhhcCceEE
Q 017064          241 VFTESQLEV----KNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS-KKPITVST-SAFIFKDLSLK  313 (378)
Q Consensus       241 vi~~~~~~~----~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~-~~~~~~~~~~~  313 (378)
                      ++|+.+.+.    +.+++.+++.| +|+||||+|++ .++.++++++++|+++++|... ..+.++++ ..++.|++++.
T Consensus        77 vi~~~~~~~~~~~~~i~~~~~~~g-~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~  155 (182)
T d1vj0a2          77 TLNRRETSVEERRKAIMDITHGRG-ADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFK  155 (182)
T ss_dssp             EEETTTSCHHHHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEE
T ss_pred             EEeccccchHHHHHHHHHhhCCCC-ceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEE
Confidence            999887643    45777787776 99999999985 4689999999999999998543 23444554 34678999999


Q ss_pred             EEechhhhccccHHHHHHHHHHHHHHHHcC
Q 017064          314 GFWLQKWLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      |++.++.          +.+++++++++++
T Consensus       156 G~~~~~~----------~~~~~~~~~i~~~  175 (182)
T d1vj0a2         156 GIWVSDT----------SHFVKTVSITSRN  175 (182)
T ss_dssp             ECCCCCH----------HHHHHHHHHHHTC
T ss_pred             EEEeCCH----------HHHHHHHHHHHHC
Confidence            9876532          3456666777665

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=2.2e-24  Score=179.53  Aligned_cols=171  Identities=15%  Similarity=0.170  Sum_probs=136.9

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++||+++|++.|+|+++.+.+++++||+|||+|+ |++|++++|+|+++|++++++++   .+++|+++++++|++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~---~~~~k~~~ak~lGa~~~   77 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD---INKDKFARAKEFGATEC   77 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC---SCGGGHHHHHHHTCSEE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEc---ccHHHHHHHHHhCCcEE
Confidence            578999999999999999988899999999999998 89999999999999987666665   47888999999999999


Q ss_pred             EccCc--ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCceEEEEec
Q 017064          242 FTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       242 i~~~~--~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +++.+  .+..+..+.+.+.| +|++||++|++.. ..++.+++++|+++.++...... ...+....+.+++++.|+.+
T Consensus        78 i~~~~~~~~~~~~~~~~~~~g-~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~  156 (176)
T d2fzwa2          78 INPQDFSKPIQEVLIEMTDGG-VDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAF  156 (176)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EeCCchhhHHHHHHHHHcCCC-CcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEee
Confidence            98865  34555555555545 9999999998654 78889999998888876443322 33334444568899999987


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +++       ...+++.++++++++|+
T Consensus       157 G~~-------~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         157 GGW-------KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             GGC-------CHHHHHHHHHHHHHTTS
T ss_pred             eCC-------cHHHHHHHHHHHHHcCC
Confidence            654       12456888889998885

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=1e-25  Score=190.29  Aligned_cols=143  Identities=25%  Similarity=0.360  Sum_probs=122.3

Q ss_pred             CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (378)
Q Consensus        45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v  124 (378)
                      ..|||++++..++++   ++++|+|.|+|+++||+|||.++|||++|++.+.|.++.  .+|+++|||++|+|+++|+++
T Consensus         6 ~~~~KAav~~~~g~~---l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~--~~P~i~GHE~~G~Vv~~G~~v   80 (198)
T d1p0fa1           6 DITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGV   80 (198)
T ss_dssp             CEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCCEEEEEEEECTTC
T ss_pred             ceEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc--ccccccceeeeeeeeecCccc
Confidence            458999999999876   899999999999999999999999999999999998765  589999999999999999999


Q ss_pred             CCCCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEEc
Q 017064          125 TRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKV  157 (378)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~i  157 (378)
                      .++++||||+..+..                                               .|+|+||+++++..++++
T Consensus        81 ~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~ki  160 (198)
T d1p0fa1          81 TCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI  160 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             ccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEEC
Confidence            999999999874421                                               278999999999999999


Q ss_pred             CCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (378)
Q Consensus       158 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~  203 (378)
                      |+++++..+++..+..          ..+.+++.|||.|+ |++|+
T Consensus       161 p~~~~~~~~~~~~~~~----------~~v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         161 DPKINVNFLVSTKLTL----------DQINKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             CTTSCGGGGEEEEECG----------GGHHHHHHHTTTSS-CSEEE
T ss_pred             CCCCCHHHHHHhhcch----------hhcCCCCEEEEECC-CcceE
Confidence            9999988777665543          22334456888887 77764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=8.2e-26  Score=187.02  Aligned_cols=170  Identities=21%  Similarity=0.255  Sum_probs=138.6

Q ss_pred             CCHhhhhhccccHHHHHHHHH---HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      +|+.+||+++++++|||++++   +.....++++|||+|++|++|++++|+||++|++||+++    +++++.+.++++|
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~----~~~~k~~~~~~lG   76 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVS----GRESTHEYLKSLG   76 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHT
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEe----cchhHHHHHHhhc
Confidence            588999999999999998764   333445567999999999999999999999999999999    5788889999999


Q ss_pred             CcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEec
Q 017064          238 ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       238 a~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +|+++|+++.+..  +.+ .+. .+|.++|++|++.+..++++++++|+++.+|...+.+.+.+...++.|++++.|++.
T Consensus        77 ad~vi~~~~~~~~--~~l-~~~-~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~  152 (177)
T d1o89a2          77 ASRVLPRDEFAES--RPL-EKQ-VWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDS  152 (177)
T ss_dssp             EEEEEEGGGSSSC--CSS-CCC-CEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCS
T ss_pred             cccccccccHHHH--HHH-Hhh-cCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEec
Confidence            9999998765422  112 222 379999999999999999999999999999988777778888899999999999765


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHc
Q 017064          318 QKWLSSEKATECRNMIDYLLCLARE  342 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~  342 (378)
                      ..    ..++...+.++++.+.+.+
T Consensus       153 ~~----~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         153 VM----TPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             SS----CCHHHHHHHHHHHHHHSCH
T ss_pred             cc----CCHHHHHHHHHHHHHhccc
Confidence            32    2455556667766665443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=2.6e-24  Score=178.06  Aligned_cols=168  Identities=20%  Similarity=0.145  Sum_probs=136.2

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      +|+++|+.+++++.|+|+++.. +++++||+|+|+|+ |++|++++|+||.+|+ +|+++.    .+++|++.++++|++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~-a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d----~~~~r~~~a~~lGa~   74 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAEL-ADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVG----SRPICVEAAKFYGAT   74 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHH-TTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEEC----CCHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEEcC-Ccchhhhhhhhhccccccccccc----chhhhHHHHHhhCcc
Confidence            5789999999999999999865 99999999999998 9999999999999999 465555    588999999999999


Q ss_pred             EEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCC-Cccccc--hhhhhcCceEEE
Q 017064          240 EVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKK-PITVST--SAFIFKDLSLKG  314 (378)
Q Consensus       240 ~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~  314 (378)
                      +++|+++.+ .+.+++++++.| +|+||||+|++. +++++++++++|+++.+|..... ..+++.  .....+++++.+
T Consensus        75 ~~i~~~~~~~~~~v~~~t~g~G-~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g  153 (174)
T d1jqba2          75 DILNYKNGHIEDQVMKLTNGKG-VDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKG  153 (174)
T ss_dssp             EEECGGGSCHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEE
T ss_pred             ccccccchhHHHHHHHHhhccC-cceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEE
Confidence            999998765 567999998877 999999999754 68999999999999999955432 222322  223457889888


Q ss_pred             EechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          315 FWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +.....         +..++++.++++.|+
T Consensus       154 ~~~~~~---------r~~~e~l~~li~~gk  174 (174)
T d1jqba2         154 GLCPGG---------RLRAERLRDMVVYNR  174 (174)
T ss_dssp             BCCCCH---------HHHHHHHHHHHHTTS
T ss_pred             ecCCCC---------cccHHHHHHHHHcCC
Confidence            765421         234567778888775

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.1e-24  Score=179.69  Aligned_cols=165  Identities=19%  Similarity=0.222  Sum_probs=132.3

Q ss_pred             CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc
Q 017064          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      ..++..+|++.|+++|+|+++++ +++++||+|+|+|+ |++|++++|+||++|++++++.    .+++++++++++|++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~-~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~----~~~~~~~~a~~lGad   76 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFT----TSEAKREAAKALGAD   76 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCS
T ss_pred             cccHHHHHHHHhHHHHHHHHHHH-hCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhc----cchhHHHHHhccCCc
Confidence            34678889999999999999975 99999999999998 9999999999999999999877    467788999999999


Q ss_pred             EEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          240 EVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       240 ~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      +++++.+.+..    ....+ ++|++|||+|++ .+..++++++++|+++.+|........++...++.+++++.|++.+
T Consensus        77 ~~i~~~~~~~~----~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~  151 (168)
T d1uufa2          77 EVVNSRNADEM----AAHLK-SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG  151 (168)
T ss_dssp             EEEETTCHHHH----HTTTT-CEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSC
T ss_pred             EEEECchhhHH----HHhcC-CCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeec
Confidence            99998865421    12222 499999999985 5899999999999999999665555566778888899999998765


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcCCc
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREGKL  345 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g~~  345 (378)
                      +.          +.++++++++++++|
T Consensus       152 ~~----------~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         152 GI----------PETQEMLDFCAEHGI  168 (168)
T ss_dssp             CH----------HHHHHHHHHHHHHTC
T ss_pred             CH----------HHHHHHHHHHHHcCC
Confidence            32          456778888877654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.9e-24  Score=176.43  Aligned_cols=166  Identities=19%  Similarity=0.198  Sum_probs=136.8

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCc
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGAD  239 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~  239 (378)
                      +|+++||.+. ++.+||+++.+ +++++||+|+|+|+ |++|++++|+|+++|++ |+++.    .+++|+++++++|++
T Consensus         1 vS~e~Aal~e-pla~a~~a~~~-~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d----~~~~rl~~a~~~Ga~   73 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHACRR-GGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTD----LSATRLSKAKEIGAD   73 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHH-HHHHHHHHHHH-hCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEecc----CCHHHHHHHHHhCCc
Confidence            5789999875 57889999876 89999999999998 99999999999999995 55555    589999999999999


Q ss_pred             EEEccCcccHHH---HHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEE
Q 017064          240 EVFTESQLEVKN---VKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       240 ~vi~~~~~~~~~---i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      ++++.++.+..+   ....+.+.+ +|++|||+|++. ++.++++++++|+++++|... .+.++++..++.|++++.|+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~g~g-~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~-~~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          74 LVLQISKESPQEIARKVEGQLGCK-PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS-EMTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHTSC-CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC-SCCCCCHHHHHHTTCEEEEC
T ss_pred             ccccccccccccccccccccCCCC-ceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC-CCCccCHHHHHHCCcEEEEE
Confidence            999988765433   222334444 999999999865 589999999999999999644 45678889999999999998


Q ss_pred             echhhhccccHHHHHHHHHHHHHHHHcCCcc
Q 017064          316 WLQKWLSSEKATECRNMIDYLLCLAREGKLK  346 (378)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~  346 (378)
                      +.+.           +.++++++++++|+++
T Consensus       152 ~~~~-----------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FRYC-----------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             CSCS-----------SCHHHHHHHHHTTSCC
T ss_pred             eCCH-----------hHHHHHHHHHHcCCCC
Confidence            6321           3467889999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=3.2e-24  Score=177.58  Aligned_cols=168  Identities=17%  Similarity=0.109  Sum_probs=133.7

Q ss_pred             HhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      +.+||++.|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+||++|++.+++++   .+++|+++++++|+++++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d---~~~~kl~~a~~lGa~~~i   77 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG---THKDKFPKAIELGATECL   77 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC---SCGGGHHHHHHTTCSEEE
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccC---ChHHHHHHHHHcCCcEEE
Confidence            46799999999999999988899999999999998 99999999999999996666665   478999999999999999


Q ss_pred             ccCccc--HHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhccc-CCEEEEEecCCCCCccccch-hhhhcCceEEEEec
Q 017064          243 TESQLE--VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQ-GGTMVTYGGMSKKPITVSTS-AFIFKDLSLKGFWL  317 (378)
Q Consensus       243 ~~~~~~--~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~  317 (378)
                      |+++.+  .+++.+.+.+.| +|++||++|+.. +..++..+++ +|+++.+|.... ...++.. ..+.+++++.|+.+
T Consensus        78 ~~~~~d~~~~~~~~~~~~~G-~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~-~~~~~~~~~~~~~~~~i~Gs~~  155 (174)
T d1p0fa2          78 NPKDYDKPIYEVICEKTNGG-VDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP-NERLPLDPLLLLTGRSLKGSVF  155 (174)
T ss_dssp             CGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT-TCCEEECTHHHHTTCEEEECSG
T ss_pred             cCCCchhHHHHHHHHhcCCC-CcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC-ccccccCHHHHhCCCEEEEEEe
Confidence            987643  566766666655 999999999854 5778888876 599999995432 3334432 23447889999987


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +++ .       .++++++++++++|+
T Consensus       156 G~~-~-------~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         156 GGF-K-------GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGC-C-------GGGHHHHHHHHHTTS
T ss_pred             CCC-C-------HHHHHHHHHHHHcCC
Confidence            654 1       135678888888875

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.2e-24  Score=178.83  Aligned_cols=133  Identities=22%  Similarity=0.232  Sum_probs=111.0

Q ss_pred             cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (378)
Q Consensus        48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~  127 (378)
                      |||+....++++   ++++|++.|+|+++||+|||.++|||++|++.+.|..+.. .+|+++|||++|+|+++|++|+++
T Consensus         1 m~a~~~~~~~~p---l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~-~~P~i~GhE~~G~V~~vG~~V~~~   76 (179)
T d1uufa1           1 IKAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT-VYPCVPGHEIVGRVVAVGDQVEKY   76 (179)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC-CSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CeEEEEccCCCC---CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccc-cccccccccccccchhhccccccC
Confidence            789999999887   8999999999999999999999999999999999976653 689999999999999999999999


Q ss_pred             CCCCEEeeCCC-----------------------------------CCcccccceeccCCceEEcCCCCCHhhhhhcccc
Q 017064          128 APGDWVIPSPP-----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (378)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~  172 (378)
                      ++||+|...+.                                   .+|+|+||+++++++++++|+.......+   .+
T Consensus        77 ~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~a---~~  153 (179)
T d1uufa1          77 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRA---DQ  153 (179)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEECG---GG
T ss_pred             CCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhHh---ch
Confidence            99999964330                                   14899999999999999999765322221   24


Q ss_pred             HHHHHHHHHHHhccCC
Q 017064          173 PLTALRMLEDFTTLNS  188 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~  188 (378)
                      +.++++++.+ +.++-
T Consensus       154 l~~a~~a~~~-a~v~~  168 (179)
T d1uufa1         154 INEAYERMLR-GDVKY  168 (179)
T ss_dssp             HHHHHHHHHT-TCSSS
T ss_pred             hHHHHHHHHH-hCccc
Confidence            6678888765 55543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=1.9e-23  Score=172.71  Aligned_cols=163  Identities=18%  Similarity=0.241  Sum_probs=132.7

Q ss_pred             CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+++||++. +..+||+++.+ +++++||+|+|+|+ |++|++++|+||++|++|+++.    .+++|++.++++|++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~----~~~~r~~~a~~~ga~~   73 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHACRR-AGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTA----RSPRRLEVAKNCGADV   73 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHH-HHHHHHHHHHH-hCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccc----hHHHHHHHHHHcCCcE
Confidence            5789999884 57789999976 89999999999986 9999999999999999999887    5899999999999998


Q ss_pred             EEccCcc--cH----HHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEE
Q 017064          241 VFTESQL--EV----KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLK  313 (378)
Q Consensus       241 vi~~~~~--~~----~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  313 (378)
                      .++.+..  +.    +.++... +.+ +|+||||+|++. ++.++++++++|+++.+|... .+.++++..++.|++++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~-g~g-~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~-~~~~~~~~~~~~k~i~i~  150 (170)
T d1e3ja2          74 TLVVDPAKEEESSIIERIRSAI-GDL-PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS-QMVTVPLVNACAREIDIK  150 (170)
T ss_dssp             EEECCTTTSCHHHHHHHHHHHS-SSC-CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS-SCCCCCHHHHHTTTCEEE
T ss_pred             EEeccccccccchhhhhhhccc-ccC-CceeeecCCChHHHHHHHHHHhcCCceEEEecCC-CCCCcCHHHHHHCCCEEE
Confidence            8765532  22    2333333 334 999999999965 689999999999999999544 456788888999999999


Q ss_pred             EEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          314 GFWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      |++.+.           +.++++++++++|+
T Consensus       151 gs~~~~-----------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         151 SVFRYC-----------NDYPIALEMVASGR  170 (170)
T ss_dssp             ECCSCS-----------SCHHHHHHHHHTTS
T ss_pred             EEECCH-----------HHHHHHHHHHHcCC
Confidence            985421           23667888988885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.91  E-value=2.1e-23  Score=173.34  Aligned_cols=171  Identities=14%  Similarity=0.169  Sum_probs=139.3

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++||+++|++.|+|+++.+.+++++||+|+|+|+ |++|+++++++++.|+.++++++   .+++|++.++++|++++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~---~~~~rl~~a~~~GAd~~   77 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATDF   77 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCCEE
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeec---chHHHHHHHHHcCCcEE
Confidence            578999999999999999988899999999999998 99999999999999986665554   47889999999999999


Q ss_pred             EccCcc--cHHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          242 FTESQL--EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       242 i~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      +|+.+.  ..+++++.+.+.| +|++||++|+.. ...++.+++++|.++.++.........+....+.+++++.|+..+
T Consensus        78 in~~~~~~~~~~~~~~~~~~G-~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G  156 (175)
T d1cdoa2          78 VNPNDHSEPISQVLSKMTNGG-VDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFG  156 (175)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSC-BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGG
T ss_pred             EcCCCcchhHHHHHHhhccCC-cceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEe
Confidence            998764  3567777777766 999999999855 577888888876665555455545555666677789999999876


Q ss_pred             hhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          319 KWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      ++       ..++++.++++++.+|+
T Consensus       157 ~~-------~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         157 GF-------KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             GC-------CHHHHHHHHHHHHHTTS
T ss_pred             CC-------cHHHHHHHHHHHHHcCC
Confidence            54       13467888899998875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.90  E-value=4.9e-23  Score=171.19  Aligned_cols=171  Identities=15%  Similarity=0.155  Sum_probs=135.2

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++||+++|++.|+|+++.+.+++++||+|||+|+ |++|++++++++..|+..+++++   .+++|++.++++|++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~---~~~~k~~~a~~~Ga~~~   77 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD---INKDKFAKAKEVGATEC   77 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCSEE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeec---CcHHHHHHHHHhCCeeE
Confidence            578999999999999999988899999999999999 89999999999999975555554   47889999999999999


Q ss_pred             EccCcc--cHHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCceEEEEec
Q 017064          242 FTESQL--EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFWL  317 (378)
Q Consensus       242 i~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  317 (378)
                      +++.+.  +.....+.+.+.| +|++||++|.+. ...++.+++++|+.+.++...... .......++.+++++.|+.+
T Consensus        78 i~~~~~~~~~~~~~~~~~~~G-~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~  156 (176)
T d2jhfa2          78 VNPQDYKKPIQEVLTEMSNGG-VDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIF  156 (176)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EecCCchhHHHHHHHHHhcCC-CCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEE
Confidence            987653  4566666666655 999999999865 478899999986555555443333 23334456679999999987


Q ss_pred             hhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          318 QKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                      +++       ..++++.++++++++|+
T Consensus       157 G~~-------~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         157 GGF-------KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             GGC-------CHHHHHHHHHHHHHTTS
T ss_pred             eCC-------CHHHHHHHHHHHHHCcC
Confidence            654       13456778888888875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=4.7e-23  Score=170.76  Aligned_cols=153  Identities=20%  Similarity=0.169  Sum_probs=124.3

Q ss_pred             CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (378)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v  241 (378)
                      ++++||.++|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+|+++|++.+++++   .+++|++.++++|++++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd---~~~~kl~~Ak~~GA~~~   78 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGID---LNKDKFEKAMAVGATEC   78 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHHTCSEE
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEec---CcHHHHHHHHhcCCcEE
Confidence            589999999999999999988899999999999998 99999999999999975444443   48999999999999999


Q ss_pred             EccCccc--HHHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccC-CEEEEEecCCCCC-ccccchhhhhcCceEEEEe
Q 017064          242 FTESQLE--VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQG-GTMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFW  316 (378)
Q Consensus       242 i~~~~~~--~~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  316 (378)
                      +|+.+.+  .+.+.+.+.+.| +|++||++|... +..++..+.++ |+++.+|...... ..+++..+ .++.++.|+.
T Consensus        79 in~~~~~~~~~~~~~~~~g~G-~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~-~~~~~i~Gs~  156 (176)
T d1d1ta2          79 ISPKDSTKPISEVLSEMTGNN-VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLL-FTGRTWKGCV  156 (176)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSC-CCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHH-HTTCEEEECS
T ss_pred             ECccccchHHHHHHHHhcccc-ceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHH-hCCCEEEEEE
Confidence            9987643  566778788776 999999999865 57777777655 9999999654332 33344444 4788999988


Q ss_pred             chhh
Q 017064          317 LQKW  320 (378)
Q Consensus       317 ~~~~  320 (378)
                      +++.
T Consensus       157 ~G~~  160 (176)
T d1d1ta2         157 FGGL  160 (176)
T ss_dssp             GGGC
T ss_pred             EeCC
Confidence            7654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=1.6e-24  Score=177.52  Aligned_cols=141  Identities=26%  Similarity=0.318  Sum_probs=119.4

Q ss_pred             cHHHHHH---HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc
Q 017064          172 NPLTALR---MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE  248 (378)
Q Consensus       172 ~~~ta~~---~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~  248 (378)
                      +++|||.   +|.+.+...++++|||+|++|++|++++|+||++|++||+++    ++++|.++++++|+++++++++.+
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~----~s~~k~~~~~~lGad~vi~~~~~~   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVAST----GNREAADYLKQLGASEVISREDVY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEE----SSSSTHHHHHHHTCSEEEEHHHHC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEe----cCHHHHHHHHhhcccceEeccchh
Confidence            4567764   455555677888999999999999999999999999999999    578889999999999999876544


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEech
Q 017064          249 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQ  318 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (378)
                      .+.+.+ +.+.+ +|+|||++|++.+..++++++++|+++.+|...+.+.+++...++.|++++.|+...
T Consensus        80 ~~~~~~-~~~~g-vd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~  147 (167)
T d1tt7a2          80 DGTLKA-LSKQQ-WQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV  147 (167)
T ss_dssp             SSCCCS-SCCCC-EEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred             chhhhc-ccCCC-ceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence            333333 44444 999999999999999999999999999999888888888999999999999997643

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=3e-21  Score=162.24  Aligned_cols=165  Identities=12%  Similarity=0.019  Sum_probs=131.2

Q ss_pred             hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      ++.+++...+.|||+++.. +++++||+|||+|+ |++|++++++|+++|+.++++++   .+++|++.++++|++++++
T Consensus         2 ~d~~~l~d~~~ta~~a~~~-a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d---~~~~rl~~a~~~Ga~~~~~   76 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGD---LNPARLAHAKAQGFEIADL   76 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCEEEET
T ss_pred             chHHhcccHHHHHHHHHHH-hCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeec---ccchhhHhhhhccccEEEe
Confidence            4667788889999999865 99999999999998 99999999999999996555554   4889999999999999999


Q ss_pred             cCccc-HHHHHHHhcCCCCCcEEEeCCCCc----------------cHHHHHHhcccCCEEEEEecCCCCC---------
Q 017064          244 ESQLE-VKNVKGLLANLPEPALGFNCVGGN----------------SASKVLKFLSQGGTMVTYGGMSKKP---------  297 (378)
Q Consensus       244 ~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~~~~---------  297 (378)
                      +.+.+ .+.+.+++++.| +|++|||+|.+                .++.++++++++|+++.+|......         
T Consensus        77 ~~~~~~~~~i~~~t~g~g-~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~  155 (195)
T d1kola2          77 SLDTPLHEQIAALLGEPE-VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAK  155 (195)
T ss_dssp             TSSSCHHHHHHHHHSSSC-EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHH
T ss_pred             CCCcCHHHHHHHHhCCCC-cEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhh
Confidence            87765 467888998877 99999999953                4689999999999999999644321         


Q ss_pred             ---ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064          298 ---ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK  344 (378)
Q Consensus       298 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  344 (378)
                         .+++...++.|++++.+-..          ...+.++++++++..++
T Consensus       156 ~~~~~~~~~~~~~k~~~i~~g~~----------~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         156 IGSLSIRFGLGWAKSHSFHTGQT----------PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TTCCCCCHHHHHHTTCEEEESSC----------CHHHHHHHHHHHHHTTS
T ss_pred             cCceeeeHHHHHhhcceeccCCC----------chHHHHHHHHHHHHcCC
Confidence               12344456778888754211          13455777888887764

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.68  E-value=4.7e-16  Score=123.15  Aligned_cols=135  Identities=18%  Similarity=0.208  Sum_probs=102.6

Q ss_pred             ccceEEEccc--CCC-ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064           47 PSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (378)
Q Consensus        47 ~~~a~~~~~~--~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~  123 (378)
                      +.|+|++.+.  |.| .+.|++++.+.|++++|||+||+++.++++..+..+....     ....+..+.+|+|++  ++
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~~-----~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLK-----EGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGSC-----TTSBCCCCEEEEEEE--ES
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccccc-----cCCccccceEEEEEE--eC
Confidence            3477888765  333 2359999999999999999999999999987665443221     223455678999987  67


Q ss_pred             CCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCH-----hhhhhccccHHH-HHHHHHHHhccCCCCEEEE
Q 017064          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM-----EYAATIIVNPLT-ALRMLEDFTTLNSGDSIVQ  194 (378)
Q Consensus       124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~-----~~aa~~~~~~~t-a~~~l~~~~~~~~g~~VlV  194 (378)
                      .++|++||+|++.    ++|+||.+++.+.+.++|+..+.     ...+++...++| ||.++..  ..+.|++||+
T Consensus        76 ~~~f~~GD~V~g~----~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~  146 (147)
T d1v3va1          76 NSAFPAGSIVLAQ----SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT  146 (147)
T ss_dssp             CTTSCTTCEEEEC----CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred             CCcccCCCEEEEc----cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence            7899999999975    68999999999999999876543     345566677887 4556644  4567999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=6.5e-16  Score=107.20  Aligned_cols=74  Identities=26%  Similarity=0.302  Sum_probs=66.8

Q ss_pred             CCHhhhhhccccHHHHHHHHH---HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (378)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (378)
                      +|+++|++++++++|||.+++   +....+++++|||+|++|++|.+++|+||.+|++|++++    +++++.++++++|
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t----~s~~k~~~~~~lG   76 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVS----GRESTHEYLKSLG   76 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEE----CCHHHHHHHHHCC
Confidence            589999999999999988765   445568999999999999999999999999999999999    5889999999988


Q ss_pred             C
Q 017064          238 A  238 (378)
Q Consensus       238 a  238 (378)
                      |
T Consensus        77 A   77 (77)
T d1o8ca2          77 A   77 (77)
T ss_dssp             E
T ss_pred             C
Confidence            5

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.3e-05  Score=67.94  Aligned_cols=80  Identities=14%  Similarity=0.147  Sum_probs=61.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+ ..++++....+..+-.+.+.+++.....|++|++|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r----~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR----TQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            6899999999999999999999999999999885    455544 44566655444444444556677767777899999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99985

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=1.4e-05  Score=67.74  Aligned_cols=80  Identities=15%  Similarity=0.094  Sum_probs=60.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++. +..++++....+..+-.+.+.+.+.....|++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR----TNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            5899999999999999999999999999999885    44444 344566544444444344556777777777899999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.99  E-value=8.5e-06  Score=66.42  Aligned_cols=77  Identities=10%  Similarity=0.006  Sum_probs=53.9

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCC-cEEEccCcccHHHHHHHhcCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGA-DEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga-~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      --.|++|||+|++|++|...++.+...|++|+++.|    +.++.+.+    .+ ... ....|..  +.+.+.+..+  
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~--   91 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR----KLDKAQAAADSVNKRFKVNVTAAETA--DDASRAEAVK--   91 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHTCCCEEEECC--SHHHHHHHTT--
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhccc----chHHHHHHHHHHHhccchhhhhhhcc--cHHHHHHHhc--
Confidence            347899999999999999999999999999999986    44444333    21 221 1222222  3345666654  


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                       ++|++|+++|.
T Consensus        92 -~iDilin~Ag~  102 (191)
T d1luaa1          92 -GAHFVFTAGAI  102 (191)
T ss_dssp             -TCSEEEECCCT
T ss_pred             -CcCeeeecCcc
Confidence             39999999884

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=1.9e-05  Score=66.91  Aligned_cols=102  Identities=20%  Similarity=0.349  Sum_probs=67.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE---EccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV---FTESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v---i~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      +|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+ ++++....   .|-.+. .+++ +.+.....|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r----~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTAT----SENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            5799999999999999999999999999998885    45554433 44554332   232222 2222 3333344456


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhc--ccCCEEEEEecC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFL--SQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l--~~~G~~v~~g~~  293 (378)
                      +|++|+++|...                          .+.++..|  +.+|++|.++..
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            999999998521                          13345555  347999999843

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.87  E-value=3.8e-05  Score=60.92  Aligned_cols=102  Identities=12%  Similarity=0.150  Sum_probs=74.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-c--------------------cc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-Q--------------------LE  248 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~--------------------~~  248 (378)
                      -+|+|+|+ |..|+.|+..|+.+|++|.+..    .+.++++.+++++...+--.. .                    ..
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D----~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~  104 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATD----VRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  104 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEe----ccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHH
Confidence            58999999 9999999999999999999887    467778888888876652100 0                    01


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCCC-----cc--HHHHHHhcccCCEEEEEecCCCCCcc
Q 017064          249 VKNVKGLLANLPEPALGFNCVGG-----NS--ASKVLKFLSQGGTMVTYGGMSKKPIT  299 (378)
Q Consensus       249 ~~~i~~~~~~~g~~Dvvid~~g~-----~~--~~~~~~~l~~~G~~v~~g~~~~~~~~  299 (378)
                      .+.+.+....   .|+||-++=-     +.  .+..++.|++|+.+|.+....+.+.+
T Consensus       105 ~~~l~~~l~~---aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~E  159 (183)
T d1l7da1         105 AEAVLKELVK---TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP  159 (183)
T ss_dssp             HHHHHHHHTT---CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred             HHHHHHHHHh---hhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccc
Confidence            1234444443   9999987742     22  27899999999999999866555543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.84  E-value=3.8e-05  Score=65.16  Aligned_cols=104  Identities=16%  Similarity=0.160  Sum_probs=69.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      -.|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+..++++...+ .|-.+. .+++ +.+.....|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----STTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            36899999999999999999999999999988875    3445566677776543 222221 2222 222222234599


Q ss_pred             EEEeCCCCcc--------------------------HHHHHHhccc--CCEEEEEecCC
Q 017064          264 LGFNCVGGNS--------------------------ASKVLKFLSQ--GGTMVTYGGMS  294 (378)
Q Consensus       264 vvid~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~  294 (378)
                      ++|+++|...                          .+.++..|.+  +|++|.++...
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9999998420                          0334555543  68999998554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.82  E-value=4.5e-05  Score=64.84  Aligned_cols=80  Identities=19%  Similarity=0.248  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEEE---ccCcc-cHHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQL-EVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~  258 (378)
                      +++.+||+|+++++|.+.++.+...|++|+++.+    ++++.    +.+++.|.....   |-.+. .++. +.+....
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r----~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR----TQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES----SHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999988899999998885    34443    344556655432   22221 2222 2223333


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        85 ~g~iDilvnnag~   97 (251)
T d2c07a1          85 HKNVDILVNNAGI   97 (251)
T ss_dssp             CSCCCEEEECCCC
T ss_pred             cCCceeeeecccc
Confidence            4469999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.78  E-value=7.4e-05  Score=65.25  Aligned_cols=84  Identities=18%  Similarity=0.169  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-----CcHHHH----HHHHhCCCcEEEccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----GSDEAK----EKLKGLGADEVFTESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-----~~~~~~----~~~~~~ga~~vi~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|++..+..+     ...++.    +.....+.....+..+. ..++ +....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5899999999999999999999999999988754311     112222    23344555555555443 2222 33333


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...|++|++|+++|.
T Consensus        86 ~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCcc
Confidence            444569999999984

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.75  E-value=0.00018  Score=56.07  Aligned_cols=100  Identities=15%  Similarity=0.106  Sum_probs=72.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .-+|+|.|+ |..|+.|++.|+.+|+.|.+..    .+.++++.+++....  .....++   +.+.+....   .|+||
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D----~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~~---aDivI  100 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFD----INVERLSYLETLFGSRVELLYSNS---AEIETAVAE---ADLLI  100 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHHT---CSEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEe----CcHHHHHHHHHhhcccceeehhhh---hhHHHhhcc---CcEEE
Confidence            468999999 9999999999999999999887    477787777653221  1222222   334444443   99999


Q ss_pred             eCCCC-----cc--HHHHHHhcccCCEEEEEecCCCCCcc
Q 017064          267 NCVGG-----NS--ASKVLKFLSQGGTMVTYGGMSKKPIT  299 (378)
Q Consensus       267 d~~g~-----~~--~~~~~~~l~~~G~~v~~g~~~~~~~~  299 (378)
                      .++=-     +.  .+..++.|++|..+|.+....+...+
T Consensus       101 ~aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~E  140 (168)
T d1pjca1         101 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVE  140 (168)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBT
T ss_pred             EeeecCCcccCeeecHHHHhhcCCCcEEEEeecCCCCccc
Confidence            98752     22  27899999999999999865555443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.70  E-value=0.00013  Score=62.25  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-E--ccCcc-cH----HHHHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EV----KNVKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i--~~~~~-~~----~~i~~~  255 (378)
                      +|+++||+|+++++|.+.++.+...|++|+.+.+    ++++.+    .+++.+.... +  |-.+. .+    +.+.+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r----~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR----NEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998885    444433    3334444322 2  22221 22    223333


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      .++  .+|++++++|.
T Consensus        83 ~~g--~idilvnnAG~   96 (259)
T d1xq1a_          83 FGG--KLDILINNLGA   96 (259)
T ss_dssp             HTT--CCSEEEEECCC
T ss_pred             hCC--Ccccccccccc
Confidence            333  59999999985

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.69  E-value=0.00019  Score=60.80  Aligned_cols=103  Identities=16%  Similarity=0.196  Sum_probs=68.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEc-cC--c-ccHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFT-ES--Q-LEVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~-~~--~-~~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+ ..++++...+.- .+  + .+.+. +.......|.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI----NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999988874    455544 445677655432 22  1 12222 2222222245


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcc-cCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLS-QGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~-~~G~~v~~g~~~  294 (378)
                      +|++|+++|...                          .+.++..|+ .+|++|.++...
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999999998421                          133455554 579999998554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.65  E-value=0.00021  Score=60.44  Aligned_cols=102  Identities=19%  Similarity=0.266  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-----HHHhCCCcEE-E--ccCcc-cHHH-HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-----KLKGLGADEV-F--TESQL-EVKN-VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-----~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~  257 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+     +.++.|.+.. +  |-.+. .++. +.+...
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR----NLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999998885    333322     2234565543 2  22222 2222 222222


Q ss_pred             CCCCCcEEEeCCCCcc--------------------------HHHHHHhcc--cCCEEEEEecC
Q 017064          258 NLPEPALGFNCVGGNS--------------------------ASKVLKFLS--QGGTMVTYGGM  293 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~~--------------------------~~~~~~~l~--~~G~~v~~g~~  293 (378)
                      ..|++|++|+++|...                          .+.++..|.  .+|++|.++..
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            2235999999998521                          134566664  46899999754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.63  E-value=0.00013  Score=61.38  Aligned_cols=80  Identities=15%  Similarity=0.197  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEE-ccCcc-cHHH-HHHHhcCCCCCc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVF-TESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi-~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+. .+++++..+. |-.+. ++++ +.+.....|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r----~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   79 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDI----EEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCce
Confidence            4799999999999999999999999999999885    4555544 4567765542 22221 2222 222222223599


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        80 ilVnnAG~   87 (242)
T d1ulsa_          80 GVVHYAGI   87 (242)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=9e-05  Score=62.63  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+.+ .+....+ .+....+.+.......+++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r----~~~~l~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDI----NESKLQELEKYPGIQTRV-LDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHGGGGGSTTEEEEE-CCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHhccCCceee-eeccccccccccccccccceeEE
Confidence            5799999999999999999999999999999985    5666655544 4433222 22222222333322333599999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      +++|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.62  E-value=0.00013  Score=61.64  Aligned_cols=82  Identities=18%  Similarity=0.145  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCc-ccHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQ-LEVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..  .++..+.+++.|.....   |-.+ ..++. +.+.....|++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~--~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--hHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999887653  34445566777765443   2222 12222 22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.62  E-value=0.0001  Score=62.75  Aligned_cols=82  Identities=17%  Similarity=0.159  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCcc-cH----HHHHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL-EV----KNVKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~~-~~----~~i~~~~~~~  259 (378)
                      +|+++||+|+++++|.+.++.+...|++|+++.+.....++..+.+++.+.....   |-.+. ..    +++.+..++ 
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g-   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG-   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC-
Confidence            6899999999999999999999999999999986422222333445566665543   22221 22    233333333 


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                       .+|++++++|.
T Consensus        84 -~idilinnag~   94 (258)
T d1ae1a_          84 -KLNILVNNAGV   94 (258)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CcEEEeccccc
Confidence             59999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.61  E-value=5.1e-05  Score=65.17  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC---CCcEEEccCcc---cHHH-HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL---GADEVFTESQL---EVKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~---ga~~vi~~~~~---~~~~-i~~~~~~~  259 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+ +++   +....+..+-.   +++. +.+.....
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999998885    44444433 333   33333322222   2222 22222223


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |++|++|+++|.
T Consensus        81 g~iD~lVnnAG~   92 (268)
T d2bgka1          81 GKLDIMFGNVGV   92 (268)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcceecccccc
Confidence            459999999983

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.60  E-value=4.2e-05  Score=63.18  Aligned_cols=104  Identities=17%  Similarity=0.139  Sum_probs=69.7

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      +..++++|++||..|+  +.|+.++.+|+..|.+|+++.+.+.-.+...+.++++|.+.+......-...   .... +.
T Consensus        72 ~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---~~~~-~p  145 (215)
T d1jg1a_          72 EIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---FPPK-AP  145 (215)
T ss_dssp             HHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---CGGG-CC
T ss_pred             HhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---Cccc-Cc
Confidence            4578999999999995  7799999999988988988874322222334455667866543222110000   1111 24


Q ss_pred             CcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          262 PALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       262 ~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ||.|+-+.+.+.. ...++.|++||++|..-
T Consensus       146 fD~Iiv~~a~~~ip~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         146 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ceeEEeecccccCCHHHHHhcCCCCEEEEEE
Confidence            9999987776554 67889999999998753

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00011  Score=61.97  Aligned_cols=81  Identities=20%  Similarity=0.174  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-EccCccc---HHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLE---VKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~  258 (378)
                      .|+++||+||++++|...+..+...|++|+++.+    ++++.+    .+++.|.... +..+-.+   ++. ++.....
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r----~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI----NKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999888889999999885    455443    3345665433 2222222   222 3333334


Q ss_pred             CCCCcEEEeCCCCc
Q 017064          259 LPEPALGFNCVGGN  272 (378)
Q Consensus       259 ~g~~Dvvid~~g~~  272 (378)
                      .|.+|++|+++|..
T Consensus        82 ~g~idilinnag~~   95 (244)
T d1yb1a_          82 IGDVSILVNNAGVV   95 (244)
T ss_dssp             TCCCSEEEECCCCC
T ss_pred             cCCCceeEeecccc
Confidence            45699999999953

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=8.3e-05  Score=64.03  Aligned_cols=101  Identities=15%  Similarity=0.195  Sum_probs=62.7

Q ss_pred             CCEE-EEeCCCchHHHHHHH-HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---H----HHHHHHhcC
Q 017064          189 GDSI-VQNGATSIVGQCIIQ-IARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---V----KNVKGLLAN  258 (378)
Q Consensus       189 g~~V-lV~g~~g~~G~~av~-la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~----~~i~~~~~~  258 (378)
                      |.+| ||+|+++++|+..++ +++..|++|+.++|..+..++..+.++..|.. .++..+-.+   +    +.+.+..  
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~--   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY--   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH--
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc--
Confidence            5666 899999999998875 55666999999996422222223334444433 222222222   2    2343333  


Q ss_pred             CCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEec
Q 017064          259 LPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  292 (378)
                       |++|++|+++|...                          .+..+..|++.|+++.++.
T Consensus        80 -g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 -GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             -SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             -CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence             35999999998420                          1334567788999999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.58  E-value=9.9e-05  Score=62.85  Aligned_cols=83  Identities=18%  Similarity=0.225  Sum_probs=53.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCCCc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL-EVKN-VKGLLANLPEPA  263 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~~D  263 (378)
                      |+.+||+|+++++|.+.++.+...|++|+++.+..+.-++..+.+++.|.....   |-.+. .++. +.+.....|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            677899999999999999999999999999885321112223344556655432   22221 2222 223333344699


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      ++|+++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999985

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.57  E-value=0.00014  Score=61.85  Aligned_cols=107  Identities=17%  Similarity=0.208  Sum_probs=66.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEE-E---ccC-c-ccHHH-HHHHhcCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEV-F---TES-Q-LEVKN-VKGLLANL  259 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~v-i---~~~-~-~~~~~-i~~~~~~~  259 (378)
                      .|++|||+|+++++|...+..+...|++|+++.|..+. .++...++ ..+-..+ +   |.. + ..+++ +.+.....
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC-HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc-HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999887543 33343333 3333222 1   221 1 11222 22222222


Q ss_pred             CCCcEEEeCCCCcc---H---------------HHHHHhcc-----cCCEEEEEecCCC
Q 017064          260 PEPALGFNCVGGNS---A---------------SKVLKFLS-----QGGTMVTYGGMSK  295 (378)
Q Consensus       260 g~~Dvvid~~g~~~---~---------------~~~~~~l~-----~~G~~v~~g~~~~  295 (378)
                      |++|++|+++|...   +               +..+..|.     ++|++|.++....
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            35999999999631   1               23344443     3689998875543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.00016  Score=61.27  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCccc---HHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLE---VKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~---~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+. +++....+..+-.+   +++ +.+.....|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK----DESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999999998874    556655554 45543333332222   222 22222223459


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++|+++|.
T Consensus        81 DilVnnAG~   89 (250)
T d1ydea1          81 DCVVNNAGH   89 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEecccc
Confidence            999999983

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.55  E-value=0.00025  Score=60.31  Aligned_cols=103  Identities=21%  Similarity=0.232  Sum_probs=69.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH----HHHHHhCCCcEEE-ccCccc---HHH-HHHHhc
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA----KEKLKGLGADEVF-TESQLE---VKN-VKGLLA  257 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~----~~~~~~~ga~~vi-~~~~~~---~~~-i~~~~~  257 (378)
                      -.|+++||+|+++++|.+.++.+...|++|+++.+.   +++.    .+.+++.|.+.+. ..+-.+   ++. +.....
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~---~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC---ChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999999999987754   3333    3445567766543 222222   211 222222


Q ss_pred             CCCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEec
Q 017064          258 NLPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  292 (378)
                      ..|++|++|+++|...                          .+.++..|+.+|.++.+..
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            3335999999998531                          1446677888888887764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=0.00014  Score=61.85  Aligned_cols=84  Identities=15%  Similarity=0.201  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcc---cHHH-HHHHhcCCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQL---EVKN-VKGLLANLPEP  262 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~---~~~~-i~~~~~~~g~~  262 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+.-++..+.+++.|..... ..+-.   +++. +.+.....|++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999885321112222344566655432 22211   2222 22222222359


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999985

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.50  E-value=0.0005  Score=58.81  Aligned_cols=103  Identities=19%  Similarity=0.228  Sum_probs=68.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH----HHHHHhCCCcEEEc-cCccc---HHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA----KEKLKGLGADEVFT-ESQLE---VKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~----~~~~~~~ga~~vi~-~~~~~---~~~-i~~~~~~  258 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+.   +++.    .+.+++.|.+.... .+-.+   +.. +.+....
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~---~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC---chHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999988753   3333    33445667655432 22222   211 2222222


Q ss_pred             CCCCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecC
Q 017064          259 LPEPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       259 ~g~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      .|++|++++++|...                          .+.+...|...|+.+.++..
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            235999999998531                          13456788889999888744

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.47  E-value=0.0002  Score=60.93  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEE---ccCc-ccHHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF---TESQ-LEVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~  258 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.|.+...   |-.+ ..+++ +......
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM----NREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998875    444433    34556655432   2222 12222 2222222


Q ss_pred             CCCCcEEEeCCCC
Q 017064          259 LPEPALGFNCVGG  271 (378)
Q Consensus       259 ~g~~Dvvid~~g~  271 (378)
                      .|++|++|+++|.
T Consensus        80 ~g~iDilVnnaG~   92 (260)
T d1zema1          80 FGKIDFLFNNAGY   92 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCeehhhhcc
Confidence            3459999999884

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.46  E-value=9.3e-05  Score=62.78  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC--Cc-EEEccC--cc-cH----HHHHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVFTES--QL-EV----KNVKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--a~-~vi~~~--~~-~~----~~i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+ ++++  .. ..+..+  +. .+    +.+.+..
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999998885    44444433 2332  12 223222  21 12    2333333


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                         |++|++|+++|.
T Consensus        81 ---G~iDiLVnnAg~   92 (251)
T d1zk4a1          81 ---GPVSTLVNNAGI   92 (251)
T ss_dssp             ---SSCCEEEECCCC
T ss_pred             ---CCceEEEecccc
Confidence               359999999985

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.46  E-value=0.001  Score=55.68  Aligned_cols=103  Identities=22%  Similarity=0.316  Sum_probs=68.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVF---TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++-+...|++|+++.+    ++++ .+..+++|.+...   |-.+. ..++ +.......|+
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDR----EERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999985    4444 3455678865443   22221 2222 2222222235


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|...                          .+..+..+..++.++..+...
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            999999987421                          033456777888877776444

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.46  E-value=0.00014  Score=62.43  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCc----EEE--ccCcc-cHHH-HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD----EVF--TESQL-EVKN-VKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~----~vi--~~~~~-~~~~-i~~~  255 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.|..    ..+  |-.+. .+++ +.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR----NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence            5899999999999999999999999999998885    444433    33444432    222  22222 2222 2222


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      ....|++|++++++|.
T Consensus        79 ~~~~G~iDilVnnAG~   94 (274)
T d1xhla_          79 LAKFGKIDILVNNAGA   94 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCceEEEeeccc
Confidence            2223359999999884

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.45  E-value=0.00019  Score=60.97  Aligned_cols=107  Identities=17%  Similarity=0.177  Sum_probs=67.0

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH---HH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV---KN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~---~~-i~~~~~~~g~  261 (378)
                      .|+++||+||+|  ++|.+.++.+...|++|+++.+.+...++..+.....+....+..+-.+.   +. +.......|+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            579999999977  79999998888889999877754322222233444566555554443322   22 1112222235


Q ss_pred             CcEEEeCCCCcc---------------H---------------HHHHHhcccCCEEEEEecCC
Q 017064          262 PALGFNCVGGNS---------------A---------------SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       262 ~Dvvid~~g~~~---------------~---------------~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +|++|+++|...               +               +.+...++++|++|.++...
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~  149 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYA  149 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehH
Confidence            999999997410               0               12334667789999988543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.44  E-value=0.00022  Score=60.64  Aligned_cols=80  Identities=14%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEEE---ccCc-ccHHH-HHHHhcC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQ-LEVKN-VKGLLAN  258 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~  258 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.    +.+++.|.....   |-.+ ..++. +.+....
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSR----NQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998885    34443    333455554432   2222 12222 2222222


Q ss_pred             CC-CCcEEEeCCCC
Q 017064          259 LP-EPALGFNCVGG  271 (378)
Q Consensus       259 ~g-~~Dvvid~~g~  271 (378)
                      .+ .+|++|+++|.
T Consensus        83 ~~~~idilvnnAG~   96 (259)
T d2ae2a_          83 FHGKLNILVNNAGI   96 (259)
T ss_dssp             TTTCCCEEEECCCC
T ss_pred             hCCCceEEEECCce
Confidence            22 49999999984

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.44  E-value=0.00016  Score=62.14  Aligned_cols=80  Identities=15%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCc----EEE--ccCcc-cHHH-HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD----EVF--TESQL-EVKN-VKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~----~vi--~~~~~-~~~~-i~~~  255 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.|..    ..+  |-.+. .++. +.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r----~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGR----SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999885    444433    33444431    122  22222 2222 2222


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      ....|++|++|+++|.
T Consensus        80 ~~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCceEEEeCCcc
Confidence            2223359999999884

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.44  E-value=2.8e-05  Score=65.55  Aligned_cols=97  Identities=19%  Similarity=0.222  Sum_probs=62.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-------HHHHHHHhcCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-------VKNVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-------~~~i~~~~~~~g  260 (378)
                      +|++|||+|+++++|.+.++.+...|++|+.+.+..  .++       ......+.....+       ...+.+..+. +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE--NEE-------ASASVIVKMTDSFTEQADQVTAEVGKLLGD-Q   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC--CTT-------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc--ccc-------ccccceeecccCcHHHHHHHHHHHHHHhCC-C
Confidence            479999999999999999999999999998876432  110       1111222212111       1233333333 2


Q ss_pred             CCcEEEeCCCCc----c-----------------------HHHHHHhcccCCEEEEEecCC
Q 017064          261 EPALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       261 ~~Dvvid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++|++|+++|..    .                       .+.++..++++|++|.++...
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~  131 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA  131 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHH
Confidence            499999999841    0                       023566788999999998543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.44  E-value=0.00016  Score=61.60  Aligned_cols=84  Identities=15%  Similarity=0.251  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHhCCCcEEE---ccCc-ccHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+. .++..+.+++.|.+...   |-.+ .++++ +.+.....|+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999888999999998864211 11223445567765443   2222 12222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999985

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.43  E-value=0.00033  Score=59.29  Aligned_cols=80  Identities=16%  Similarity=0.111  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEE---ccCc-ccHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi---~~~~-~~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++. +..+++|.....   |-.+ .++++ +.+.....|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADV----LDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999899999988885    34444 455677755432   2222 12222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        80 iDilVnnAg~   89 (254)
T d1hdca_          80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEecCcc
Confidence            9999999984

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.43  E-value=0.00018  Score=61.31  Aligned_cols=84  Identities=19%  Similarity=0.164  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+...+..+ +.++.|.+...   |-.+. .+++ +.+.....|+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999876433333333 33455654432   22221 2222 2222333346


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999984

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.43  E-value=0.00023  Score=60.01  Aligned_cols=100  Identities=17%  Similarity=0.271  Sum_probs=63.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|||+|+++++|.+.++.+...|++|++..+.   ++++.    +.++..|.+.. +  |-.+. .++. +.+.....|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~---~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYAR---SAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999887642   33333    33345665433 2  22221 2222 2223333446


Q ss_pred             CcEEEeCCCCcc--------------------------HHHHHHhc--ccCCEEEEEecC
Q 017064          262 PALGFNCVGGNS--------------------------ASKVLKFL--SQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~~--------------------------~~~~~~~l--~~~G~~v~~g~~  293 (378)
                      +|++|+++|...                          .+.++..|  +.+|++|.++..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            999999998521                          03345555  457999999854

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00041  Score=57.95  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|+++||+|+++++|.+.++.+...|++|+++.+    ++++   +++.+...+.-.-...++.+.+..   |++|++|+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r----~~~~---l~~~~~~~~~~Dv~~~~~~~~~~~---g~iD~lVn   72 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEEL---LKRSGHRYVVCDLRKDLDLLFEKV---KEVDILVL   72 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHH---HHHTCSEEEECCTTTCHHHHHHHS---CCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHH---HHhcCCcEEEcchHHHHHHHHHHh---CCCcEEEe
Confidence            5799999999999999999999999999998884    4443   445565554321122334444433   45999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      ++|.
T Consensus        73 nAG~   76 (234)
T d1o5ia_          73 NAGG   76 (234)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00011  Score=62.57  Aligned_cols=77  Identities=14%  Similarity=0.211  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCc-EEE----ccCc-ccH----HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVF----TESQ-LEV----KNVK  253 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~-~vi----~~~~-~~~----~~i~  253 (378)
                      .|+++||+|+++++|.+.+..+...|++|+.+.+    ++++.+.    +++.+.. .++    |-.+ +++    +.+.
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r----~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR----TVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999998885    4444333    3444422 222    2222 222    2333


Q ss_pred             HHhcCCCCCcEEEeCCCC
Q 017064          254 GLLANLPEPALGFNCVGG  271 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~  271 (378)
                      +..   |++|++|+++|.
T Consensus        85 ~~~---g~iD~lVnnAg~   99 (257)
T d1xg5a_          85 SQH---SGVDICINNAGL   99 (257)
T ss_dssp             HHH---CCCSEEEECCCC
T ss_pred             Hhc---CCCCEEEecccc
Confidence            333   359999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.39  E-value=0.00019  Score=61.21  Aligned_cols=80  Identities=13%  Similarity=0.154  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCc----EEE--ccCcc-cHHH-HHHH
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD----EVF--TESQL-EVKN-VKGL  255 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~----~vi--~~~~~-~~~~-i~~~  255 (378)
                      .|+.+||+|+++++|.+.++.+...|++|+++.+    ++++.+    .++..|..    ..+  |-.+. .+++ +...
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   79 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGR----HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   79 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999998885    444433    33344422    222  22222 2222 2222


Q ss_pred             hcCCCCCcEEEeCCCC
Q 017064          256 LANLPEPALGFNCVGG  271 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~  271 (378)
                      ....|++|++|+++|.
T Consensus        80 ~~~~g~iDilvnnAG~   95 (264)
T d1spxa_          80 LGKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHHSCCCEEEECCC-
T ss_pred             HHHhCCCCEeeccccc
Confidence            2233459999999884

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.37  E-value=0.00025  Score=60.12  Aligned_cols=78  Identities=17%  Similarity=0.098  Sum_probs=51.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEEE-ccCccc---HHH-HHHHhcCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF-TESQLE---VKN-VKGLLANLP  260 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi-~~~~~~---~~~-i~~~~~~~g  260 (378)
                      +.+||+|+++++|.+.++.+...|++|+++.+    ++++.    +.+++.|.+... ..+-.+   ++. +.+.....|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY----NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            34699999999999999888889999998885    34443    334556655432 222222   222 222333344


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|++|+++|.
T Consensus        78 ~iDilVnnAG~   88 (255)
T d1gega_          78 GFDVIVNNAGV   88 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CccEEEecccc
Confidence            69999999984

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.36  E-value=0.00029  Score=60.07  Aligned_cols=101  Identities=19%  Similarity=0.139  Sum_probs=66.3

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      ....+++||++||=.|+  +.|.++..+|+..|  .+|+++.    .+++..+.+    +.+|....+.....+   +..
T Consensus        96 i~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD----~~~~~~~~A~~~~~~~g~~~~v~~~~~d---~~~  166 (266)
T d1o54a_          96 AMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYE----KREEFAKLAESNLTKWGLIERVTIKVRD---ISE  166 (266)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEEC----CCHHHHHHHHHHHHHTTCGGGEEEECCC---GGG
T ss_pred             HHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEe----CCHHHHHHHHHHHHHhccccCcEEEecc---ccc
Confidence            34589999999999997  55888889999875  5777776    466665555    346642111111111   111


Q ss_pred             HhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..... .+|.|+--...+  .+.++.+.|+|||+++.+.
T Consensus       167 ~~~~~-~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 GFDEK-DVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CCSCC-SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ccccc-ceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            12222 388888766653  4589999999999998764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.35  E-value=0.00067  Score=57.30  Aligned_cols=78  Identities=8%  Similarity=-0.096  Sum_probs=48.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc--cHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |+||+|+++++|++.++.+...|++|++..+..+..++-......+..-.+.+..+.  .++++.+..   |++|++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~---G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY---GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH---SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc---CCCCEEEEC
Confidence            789999999999999998889999998877543222222222223333333332221  123344444   359999998


Q ss_pred             CCC
Q 017064          269 VGG  271 (378)
Q Consensus       269 ~g~  271 (378)
                      +|.
T Consensus        79 Ag~   81 (252)
T d1zmta1          79 DIF   81 (252)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            773

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=0.00053  Score=57.60  Aligned_cols=80  Identities=15%  Similarity=0.109  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+ ..++++.....   |-.+. .+++ +.+.....|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI----LDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999998885    455544 44556544332   22221 2222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        81 idilinnAG~   90 (244)
T d1nffa_          81 LHVLVNNAGI   90 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.33  E-value=0.00038  Score=59.03  Aligned_cols=80  Identities=14%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVF---TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++. +..+++|.....   |-.+. .+++ +.+.....|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r----~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADI----NLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999998875    44444 445667765443   22221 2222 2222222235


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|++|+++|.
T Consensus        80 iDilVnnAg~   89 (256)
T d1k2wa_          80 IDILVNNAAL   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEeeccc
Confidence            9999999984

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.33  E-value=0.00043  Score=58.33  Aligned_cols=81  Identities=16%  Similarity=0.195  Sum_probs=50.3

Q ss_pred             CEEEEeCCCchHHHHHHHHHH---HcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC--c-ccHH----HHHHHhcCC
Q 017064          190 DSIVQNGATSIVGQCIIQIAR---HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--Q-LEVK----NVKGLLANL  259 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~---~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~--~-~~~~----~i~~~~~~~  259 (378)
                      ++|||+|+++++|.+.++.+.   ..|++|+++.|..+..++-.+..+..+--.++..+  + +.++    .++.... .
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~-~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK-D   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG-G
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh-c
Confidence            589999999999999886553   46899999998765444333334443333333222  2 2222    2332222 2


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      +++|++|+++|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            359999999884

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.33  E-value=4.8e-05  Score=62.92  Aligned_cols=100  Identities=18%  Similarity=0.181  Sum_probs=64.8

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHH
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+..++++|++||-.|+  +.|..++.+|+..|.  +|+++.    .+++..+.++    ..+.+.+.-... +....  
T Consensus        68 l~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id----~~~~~~~~a~~~~~~~~~~n~~~~~~-d~~~~--  138 (213)
T d1dl5a1          68 MEWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVERLGIENVIFVCG-DGYYG--  138 (213)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEES-CGGGC--
T ss_pred             HHhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEee----cchhhHHHhhhhHhhhcccccccccC-chHHc--
Confidence            34588999999999997  448899999998764  677666    3555554443    455443321111 11110  


Q ss_pred             HhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEE
Q 017064          255 LLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~  290 (378)
                      .... +.||+|+.+.+-..+ +..++.|+|||+++..
T Consensus       139 ~~~~-~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         139 VPEF-SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             CGGG-CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             cccc-cchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            0111 249999987775544 6788999999999874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=0.00045  Score=59.61  Aligned_cols=104  Identities=10%  Similarity=0.058  Sum_probs=68.9

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcEEEccCcccHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLEVKN  251 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~vi~~~~~~~~~  251 (378)
                      -+..+.+.+++++|++||=+|+  |.|..+..+|+..|++|++++    -+++..+.    +++.|....+.....+.. 
T Consensus        49 k~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git----~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~-  121 (291)
T d1kpia_          49 KRKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLT----LSENQYAHDKAMFDEVDSPRRKEVRIQGWE-  121 (291)
T ss_dssp             HHHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHSCCSSCEEEEECCGG-
T ss_pred             HHHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeecc----chHHHHHHHHHHHHhhccchhhhhhhhccc-
Confidence            3445667789999999999997  666778899999999999988    45665443    445565432222111111 


Q ss_pred             HHHHhcCCCCCcEEEe-----CCCC-----------ccHHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFN-----CVGG-----------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g  291 (378)
                         ...  +.||.|+.     .++.           ..++.+.+.|+|||+++.-.
T Consensus       122 ---~~~--~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 ---EFD--EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             ---GCC--CCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ---ccc--cccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence               112  25998874     3332           12477889999999998654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.25  E-value=4.6e-05  Score=64.05  Aligned_cols=95  Identities=16%  Similarity=0.227  Sum_probs=61.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-------HHHHHHHhcCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-------VKNVKGLLANLPE  261 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-------~~~i~~~~~~~g~  261 (378)
                      +.+|||+|+++++|.+.++.+...|++|+.+.+.....         ......+..+..+       .+.+..... .|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------ADSNILVDGNKNWTEQEQSILEQTASSLQ-GSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------SSEEEECCTTSCHHHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc---------ccccceeccccCchhHHHHHHHHHHHHhc-CCC
Confidence            45799999999999999999999999999887642110         1111222222211       122333332 346


Q ss_pred             CcEEEeCCCCc----c-----------------------HHHHHHhcccCCEEEEEecC
Q 017064          262 PALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       262 ~Dvvid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~  293 (378)
                      +|++|+++|..    .                       .+..+..|+++|+++.++..
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            99999999841    0                       02356778899999999854

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.24  E-value=0.00016  Score=61.57  Aligned_cols=79  Identities=18%  Similarity=0.090  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh--CCCcEE-E--ccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG--LGADEV-F--TESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~--~ga~~v-i--~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+    .+  .+...+ +  |-.+. +++. +.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   78 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV----SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   78 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999998885    44443322    22  232322 2  32222 2222 12222


Q ss_pred             cCCCCCcEEEeCCC
Q 017064          257 ANLPEPALGFNCVG  270 (378)
Q Consensus       257 ~~~g~~Dvvid~~g  270 (378)
                      ...|++|++|+++|
T Consensus        79 ~~~G~iDiLVnnAG   92 (258)
T d1iy8a_          79 ERFGRIDGFFNNAG   92 (258)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHhCCCCEEEECCc
Confidence            22235999999998

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.23  E-value=0.0007  Score=56.73  Aligned_cols=100  Identities=14%  Similarity=0.173  Sum_probs=61.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCc-------EEEEecCCCCcHHHHH----HHHhCCCcEE-E--ccCcc-cHHH-HHH
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIH-------SINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKG  254 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~-------vi~~~~~~~~~~~~~~----~~~~~ga~~v-i--~~~~~-~~~~-i~~  254 (378)
                      .|||+|+++++|.+.+..+...|++       |+...+    ++++.+    .+++.|.... +  |-.+. .+++ +.+
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r----~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR----TAADLEKISLECRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES----CHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            4799999999999999888888988       666654    444433    3345565433 2  22221 2222 222


Q ss_pred             HhcCCCCCcEEEeCCCCcc--------------------------HHHHHHhcc--cCCEEEEEecCC
Q 017064          255 LLANLPEPALGFNCVGGNS--------------------------ASKVLKFLS--QGGTMVTYGGMS  294 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~--------------------------~~~~~~~l~--~~G~~v~~g~~~  294 (378)
                      .....|.+|++|+++|...                          .+.++..|+  .+|+++.++...
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  146 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA  146 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence            3333446999999998521                          033455554  478999987543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00013  Score=61.88  Aligned_cols=103  Identities=14%  Similarity=0.235  Sum_probs=63.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---h-C-CCcEE-E--ccCcc-cHHH-HHHHh
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---G-L-GADEV-F--TESQL-EVKN-VKGLL  256 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~-~-ga~~v-i--~~~~~-~~~~-i~~~~  256 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+ .   + . +.... +  |-.+. +++. +.+..
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW----NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   77 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999885    44443322 2   2 2 22222 2  22221 2222 22222


Q ss_pred             cCCCCCcEEEeCCCCcc---H---------------HHHHHhccc-----CCEEEEEecCC
Q 017064          257 ANLPEPALGFNCVGGNS---A---------------SKVLKFLSQ-----GGTMVTYGGMS  294 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~---~---------------~~~~~~l~~-----~G~~v~~g~~~  294 (378)
                      ...|++|++|+++|...   +               ..++..|.+     +|++|.++...
T Consensus        78 ~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~  138 (254)
T d2gdza1          78 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  138 (254)
T ss_dssp             HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             HHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence            22345999999999531   1               233444443     58899998543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.21  E-value=0.00061  Score=58.42  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TESQL-EVKN-VKGLLANLPE  261 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~  261 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+ ..+++|.....   |..+. +.+. +.+.....|.
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK----SAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999885    455554 34456654332   22221 2222 2222223345


Q ss_pred             CcEEEeCCC
Q 017064          262 PALGFNCVG  270 (378)
Q Consensus       262 ~Dvvid~~g  270 (378)
                      +|++++++|
T Consensus        80 idilvnnAG   88 (276)
T d1bdba_          80 IDTLIPNAG   88 (276)
T ss_dssp             CCEEECCCC
T ss_pred             ccccccccc
Confidence            999999998

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.17  E-value=0.00051  Score=59.08  Aligned_cols=104  Identities=10%  Similarity=0.069  Sum_probs=68.8

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN  251 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~  251 (378)
                      -...+.+..++++|++||=.|+  |.|..++.+|+..|++|++++    -++++.+.++    +.|...-+.....+   
T Consensus        50 k~~~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git----~s~~Q~~~a~~~~~~~g~~~~v~~~~~d---  120 (285)
T d1kpga_          50 KIDLALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLT----LSKNQANHVQQLVANSENLRSKRVLLAG---  120 (285)
T ss_dssp             HHHHHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTCCCCSCEEEEESC---
T ss_pred             HHHHHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEe----ccHHHHHHHHHHHHhhhhhhhhHHHHhh---
Confidence            3445666788999999999997  778999999999999999998    4676666554    33322111111111   


Q ss_pred             HHHHhcCCCCCcEEEe-----CCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFN-----CVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid-----~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+.+ ++  .+|.|+.     .+|..    .++.+.+.|+|||+++...
T Consensus       121 ~~~~-~~--~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         121 WEQF-DE--PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             GGGC-CC--CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hhcc-cc--cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            1111 22  4888764     33332    2367889999999998644

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.16  E-value=0.0011  Score=56.05  Aligned_cols=87  Identities=18%  Similarity=0.240  Sum_probs=55.2

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCC---CCcHHHHHHHHhCCCcEEE-ccCcccH---HHHHHHh
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDR---AGSDEAKEKLKGLGADEVF-TESQLEV---KNVKGLL  256 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~---~~~~~~~~~~~~~ga~~vi-~~~~~~~---~~i~~~~  256 (378)
                      .++|+.++||+|+++++|+..++.+...|++ ++.+.|..   +...+..+.++..|....+ ..+-.+.   ..+....
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4789999999999999999999888888996 55454431   1223334455667765433 2222232   3333323


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      ...+.+|.++++.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence            333358999999985

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.16  E-value=0.00063  Score=58.84  Aligned_cols=80  Identities=16%  Similarity=0.206  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-----HHHhCCCcEE-EccCccc---HHH-HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-----KLKGLGADEV-FTESQLE---VKN-VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-----~~~~~ga~~v-i~~~~~~---~~~-i~~~~~  257 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+.    +++.+     +..+.|.... +..+-.+   ++. +.....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~----~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC----HHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            46999999999999999999999999999999863    33322     2233454433 3222222   221 222233


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+++|++++++|.
T Consensus       100 ~~g~iDilvnnAg~  113 (294)
T d1w6ua_         100 VAGHPNIVINNAAG  113 (294)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             hccccchhhhhhhh
Confidence            33459999999985

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.09  E-value=0.0026  Score=49.36  Aligned_cols=73  Identities=16%  Similarity=0.231  Sum_probs=51.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHH-HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      -.+.+|||.|+ |.+|...++.+...|++ ++++-|    +.++ .++++++|.. +++.     +++......   +|+
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nR----t~~ka~~l~~~~~~~-~~~~-----~~~~~~l~~---~Di   87 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR----TYERAVELARDLGGE-AVRF-----DELVDHLAR---SDV   87 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS----SHHHHHHHHHHHTCE-ECCG-----GGHHHHHHT---CSE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcC----cHHHHHHHHHhhhcc-cccc-----hhHHHHhcc---CCE
Confidence            46789999999 99999999999989996 445543    4444 4566777753 2322     233333333   999


Q ss_pred             EEeCCCCcc
Q 017064          265 GFNCVGGNS  273 (378)
Q Consensus       265 vid~~g~~~  273 (378)
                      ||.|++.+.
T Consensus        88 vi~atss~~   96 (159)
T d1gpja2          88 VVSATAAPH   96 (159)
T ss_dssp             EEECCSSSS
T ss_pred             EEEecCCCC
Confidence            999999753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.09  E-value=0.00096  Score=56.91  Aligned_cols=83  Identities=12%  Similarity=0.074  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcc---cHH-HHHHHhcCCC
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQL---EVK-NVKGLLANLP  260 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~---~~~-~i~~~~~~~g  260 (378)
                      +|+++||+|++|  ++|.+.++.+...|++|+++.+.+. .+++.+.+ .+.+...++..+..   +.+ .+.+.....|
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            589999999876  7999999999999999999887642 33343333 33333333322221   121 2223333344


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ++|+++.++|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            69999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00067  Score=58.79  Aligned_cols=81  Identities=22%  Similarity=0.249  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HH-h----CCCcEE-E--ccCcc-cHHH-H
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LK-G----LGADEV-F--TESQL-EVKN-V  252 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~-~----~ga~~v-i--~~~~~-~~~~-i  252 (378)
                      -.|+++||+|+++++|.+.++.+...|++|+++.+    +.++.+.    ++ .    .|...+ +  |-.+. .++. +
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r----~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASR----KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            46899999999999999999999999999999885    4444322    22 1    233332 2  22221 2222 2


Q ss_pred             HHHhcCCCCCcEEEeCCCC
Q 017064          253 KGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~  271 (378)
                      .+.....|++|++|+++|.
T Consensus        86 ~~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHhCCeEEEEeeccc
Confidence            2222222359999999985

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.06  E-value=0.00093  Score=56.65  Aligned_cols=81  Identities=20%  Similarity=0.174  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HH-HhCCCcEEE---ccCc-ccHHH-HHHHhc
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KL-KGLGADEVF---TESQ-LEVKN-VKGLLA  257 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~-~~~ga~~vi---~~~~-~~~~~-i~~~~~  257 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+.   ..++.+    .+ ...|.....   |-.+ ++++. +.+...
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~---~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG---DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS---CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999988864   223222    22 234544432   2222 12222 222222


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..|++|++|+++|.
T Consensus        80 ~~G~iDiLVnnAG~   93 (260)
T d1x1ta1          80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCcEEEeeccc
Confidence            22359999999985

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00045  Score=56.31  Aligned_cols=96  Identities=18%  Similarity=0.169  Sum_probs=65.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      .++|+|+||+|.+|...+..+...|.+|++++|.    .++.......+++ ++..+-.+.+.+.+...+   .|+||.+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~----~~~~~~~~~~~~~-~~~gD~~d~~~l~~al~~---~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD----SSRLPSEGPRPAH-VVVGDVLQAADVDKTVAG---QDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----GGGSCSSSCCCSE-EEESCTTSHHHHHHHHTT---CSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcC----hhhcccccccccc-cccccccchhhHHHHhcC---CCEEEEE
Confidence            4789999999999999999888889999999964    3333222233443 344444455667666654   9999999


Q ss_pred             CCCcc-----------HHHHHHhcccC--CEEEEEec
Q 017064          269 VGGNS-----------ASKVLKFLSQG--GTMVTYGG  292 (378)
Q Consensus       269 ~g~~~-----------~~~~~~~l~~~--G~~v~~g~  292 (378)
                      +|...           ....++.++..  .+++.++.
T Consensus        75 ~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             eccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            98521           13445555554  37888764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00084  Score=57.24  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=52.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-----hCCCcEEE-ccCccc---H----HHHH
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-----GLGADEVF-TESQLE---V----KNVK  253 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-----~~ga~~vi-~~~~~~---~----~~i~  253 (378)
                      -.|+++||+||++++|.+.++.+...|++|+++.|    ++++.+.+.     ..+..... ..+..+   .    +.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r----~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   87 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR----SKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG   87 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHH
Confidence            46899999999999999999999999999999996    455544332     23433322 222211   1    2233


Q ss_pred             HHhcCCCCCcEEEeCCCC
Q 017064          254 GLLANLPEPALGFNCVGG  271 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~  271 (378)
                      ...+   ..|++++++|.
T Consensus        88 ~~~g---~~~~li~nag~  102 (269)
T d1xu9a_          88 KLMG---GLDMLILNHIT  102 (269)
T ss_dssp             HHHT---SCSEEEECCCC
T ss_pred             HHhC---Ccccccccccc
Confidence            3333   49999998875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.02  E-value=0.0009  Score=57.38  Aligned_cols=104  Identities=11%  Similarity=0.120  Sum_probs=67.0

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN  251 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~  251 (378)
                      -+..+.+..++++|++||=.|+  +.|..+..+++..|++|+++.    -+++..+.++    +.|....+.....+.  
T Consensus        40 k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~----ls~~q~~~a~~~~~~~~l~~~~~~~~~d~--  111 (280)
T d2fk8a1          40 KVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLT----LSKNQHARCEQVLASIDTNRSRQVLLQGW--  111 (280)
T ss_dssp             HHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTSCCSSCEEEEESCG--
T ss_pred             HHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEec----chHHHHHHHHHHHHhhccccchhhhhhhh--
Confidence            3555666678999999999998  445667888999999999988    4666655553    445322111111111  


Q ss_pred             HHHHhcCCCCCcEEEe-----CCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFN-----CVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid-----~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                       ... .+  .+|.|+.     .++..    .++...+.|+|||+++.-.
T Consensus       112 -~~~-~~--~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         112 -EDF-AE--PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             -GGC-CC--CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hhh-cc--chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence             111 22  4898864     33333    2477889999999998754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.011  Score=45.57  Aligned_cols=103  Identities=14%  Similarity=0.082  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064          174 LTALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       174 ~ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      -+.+.++.+..+ .-.|++|+|.|- |-+|...++.++.+|++|+++..    .+-+.-.+.--|....         .+
T Consensus         8 ~S~~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~----dp~~al~A~~dG~~v~---------~~   73 (163)
T d1li4a1           8 ESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEI----DPINALQAAMEGYEVT---------TM   73 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHTTCEEC---------CH
T ss_pred             hhHHHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeec----ccchhHHhhcCceEee---------eh
Confidence            345666655444 568999999998 99999999999999999998873    3433322223343321         23


Q ss_pred             HHHhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEecC
Q 017064          253 KGLLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~~  293 (378)
                      .+...   ..|+++-++|+.. + .+-++.|+++--+..+|..
T Consensus        74 ~~a~~---~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          74 DEACQ---EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             HHHTT---TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             hhhhh---hccEEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            33333   3899999999854 3 7889999999988888743

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.98  E-value=0.0037  Score=45.42  Aligned_cols=91  Identities=8%  Similarity=-0.119  Sum_probs=64.5

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc-cCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT-ESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~-~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|.+|||.|+ |.+|..-++.+...|++|+++...  .+++...++.+-+....-. +.+.   .    ..   ++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~--~~~~~~~~~~~~~i~~~~~~~~~~---d----l~---~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALT--FIPQFTVWANEGMLTLVEGPFDET---L----LD---SCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESS--CCHHHHHHHTTTSCEEEESSCCGG---G----GT---TCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecc--CChHHHHHHhcCCceeeccCCCHH---H----hC---CCcEEe
Confidence            4789999999 999999999999999999888743  3444445554433332221 1111   1    11   389999


Q ss_pred             eCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          267 NCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       267 d~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      .+++.+.. .......++.|.+|.+.
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeC
Confidence            99998777 46678888899998876

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.94  E-value=0.00046  Score=57.07  Aligned_cols=98  Identities=12%  Similarity=0.040  Sum_probs=64.2

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHh
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~  256 (378)
                      .+..++++|++||-.|+  +.|..++.+|+. +.+|+++.    .+++..+.+++    ..-..++..+...  .   ..
T Consensus        63 l~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE----~~~~~~~~A~~~~~~~~nv~~~~~d~~~--g---~~  130 (224)
T d1vbfa_          63 LDELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVE----INEKMYNYASKLLSYYNNIKLILGDGTL--G---YE  130 (224)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEE----SCHHHHHHHHHHHTTCSSEEEEESCGGG--C---CG
T ss_pred             HHHhhhcccceEEEecC--CCCHHHHHHHHH-hccccccc----ccHHHHHHHHHHHhcccccccccCchhh--c---ch
Confidence            34578999999999997  577888878875 67888877    35666665553    2222222222111  0   01


Q ss_pred             cCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          257 ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      .. +.||.|+-+.+.+.+ ...++.|++||++|..-
T Consensus       131 ~~-~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         131 EE-KPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             GG-CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hh-hhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEE
Confidence            11 249999876665444 67789999999998864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.92  E-value=0.00082  Score=56.61  Aligned_cols=78  Identities=23%  Similarity=0.224  Sum_probs=50.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhC-CCc-EEE--ccCcc-cH----HHHHHHhc
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGL-GAD-EVF--TESQL-EV----KNVKGLLA  257 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~-ga~-~vi--~~~~~-~~----~~i~~~~~  257 (378)
                      .++|||+||++++|.+.++.+...|+  +|+.+.|    +.++.+.+++. +.. +++  |-.+. .+    +.+.+..+
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R----~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR----DVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES----SGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC----CHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999988877886  5777775    34444555543 332 222  22221 22    33444444


Q ss_pred             CCCCCcEEEeCCCC
Q 017064          258 NLPEPALGFNCVGG  271 (378)
Q Consensus       258 ~~g~~Dvvid~~g~  271 (378)
                      ..+ +|++|+++|.
T Consensus        79 ~~~-idilinnAG~   91 (250)
T d1yo6a1          79 SDG-LSLLINNAGV   91 (250)
T ss_dssp             GGC-CCEEEECCCC
T ss_pred             CCC-eEEEEEcCcc
Confidence            333 9999999984

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.0025  Score=53.65  Aligned_cols=85  Identities=20%  Similarity=0.121  Sum_probs=55.5

Q ss_pred             CCCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----HHHHHHhcCCC
Q 017064          187 NSGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLLANLP  260 (378)
Q Consensus       187 ~~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----~~i~~~~~~~g  260 (378)
                      -.|+++||+|+++  ++|.+.+..+...|++|+++.+.+...+...+.....+....+..+..+.    ..........+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3689999999988  78888888888999999988875432222233445566555544333222    22333344445


Q ss_pred             CCcEEEeCCCC
Q 017064          261 EPALGFNCVGG  271 (378)
Q Consensus       261 ~~Dvvid~~g~  271 (378)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            68999998864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.0011  Score=52.19  Aligned_cols=100  Identities=17%  Similarity=0.098  Sum_probs=60.7

Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC---CCcEEEccCcccHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL---GADEVFTESQLEVKNV  252 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~i  252 (378)
                      ..+|.+..-..+|++|||+|+ |+.+.+++..+...|++++++.|    +.++.+.+ +.+   +....+..++      
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nR----t~~ka~~l~~~~~~~~~~~~~~~~~------   74 (170)
T d1nyta1           6 LSDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR----TVSRAEELAKLFAHTGSIQALSMDE------   74 (170)
T ss_dssp             HHHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----SHHHHHHHHHHTGGGSSEEECCSGG------
T ss_pred             HHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccc----hHHHHHHHHHHHhhccccccccccc------
Confidence            345655444567899999999 99999999988899998777665    44554433 333   2222222211      


Q ss_pred             HHHhcCCCCCcEEEeCCCCccHH----HHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                        ....  .+|++|+|+......    .-.+.++++..++.+-
T Consensus        75 --~~~~--~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          75 --LEGH--EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             --GTTC--CCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             --cccc--ccceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence              1111  499999998643221    1134566666655553

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0006  Score=57.26  Aligned_cols=105  Identities=21%  Similarity=0.222  Sum_probs=67.4

Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHH
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNV  252 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i  252 (378)
                      +..|....++.||++||=.|+  +.|..+..+++..|++|+++.    -+++..+.++    ..|...-+.....+.   
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD----~s~~~~~~ar~~~~~~gl~~~v~~~~~d~---   92 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGID----MSSLFTAQAKRRAEELGVSERVHFIHNDA---   92 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCC---
T ss_pred             HHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEe----cccchhhHHHHHHHHhhccccchhhhhHH---
Confidence            445667799999999999997  556778888888899998887    4665555443    455431111111111   


Q ss_pred             HHHhcCCCCCcEEEeCCCC-------ccHHHHHHhcccCCEEEEEe
Q 017064          253 KGLLANLPEPALGFNCVGG-------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+... +.||+|+..-.-       ..+....+.|+|||+++...
T Consensus        93 ~~~~~~-~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          93 AGYVAN-EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             TTCCCS-SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             hhcccc-CceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            112222 259999854332       12367789999999998754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.69  E-value=0.0023  Score=53.35  Aligned_cols=76  Identities=14%  Similarity=0.106  Sum_probs=48.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHH-HHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~-i~~~~~~~g~~Dvv  265 (378)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..+..+       +. .....|..+. .+++ +.+.....|++|++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------~~-~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------GL-FGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------TS-EEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-------Cc-eEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            5799999999999999999999999999999986532111       10 0111222222 2222 22222222359999


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      |+++|.
T Consensus        78 VnnAG~   83 (237)
T d1uzma1          78 VSNAGL   83 (237)
T ss_dssp             EEECSC
T ss_pred             Eeeecc
Confidence            999985

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.69  E-value=0.0039  Score=48.77  Aligned_cols=73  Identities=12%  Similarity=0.218  Sum_probs=50.0

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHh
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~  256 (378)
                      .|.+ .++.++++|||.|+ |+.+.+++..++..|+ ++.++.|    +.++.+.+ ..++...+ +...          
T Consensus         8 ~l~~-~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR----~~~ka~~L~~~~~~~~~-~~~~----------   70 (167)
T d1npya1           8 LIEK-YHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYAR----NVKTGQYLAALYGYAYI-NSLE----------   70 (167)
T ss_dssp             HHHH-TTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECS----CHHHHHHHHHHHTCEEE-SCCT----------
T ss_pred             HHHH-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecc----cHHHHHHHHHhhhhhhh-hccc----------
Confidence            4444 56667899999999 9999999999999998 5555554    55665544 44554432 2111          


Q ss_pred             cCCCCCcEEEeCCC
Q 017064          257 ANLPEPALGFNCVG  270 (378)
Q Consensus       257 ~~~g~~Dvvid~~g  270 (378)
                      ..  .+|++|+|+.
T Consensus        71 ~~--~~DliINaTp   82 (167)
T d1npya1          71 NQ--QADILVNVTS   82 (167)
T ss_dssp             TC--CCSEEEECSS
T ss_pred             cc--chhhheeccc
Confidence            01  4999999986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.68  E-value=0.0077  Score=44.90  Aligned_cols=76  Identities=14%  Similarity=0.166  Sum_probs=56.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|+|.|+ |.+|+..++.+...|..|+++.    .++++.+.+.+ ++.. ++..+..+.+.+++..-.  .+|.++-++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid----~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~--~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLID----IDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIE--DADMYIAVT   73 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTT--TCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceec----CChhhhhhhhhhhhhh-hccCcccchhhhhhcChh--hhhhhcccC
Confidence            5899999 9999999999999999998887    57888777754 5654 454555554455544222  499999998


Q ss_pred             CCccH
Q 017064          270 GGNSA  274 (378)
Q Consensus       270 g~~~~  274 (378)
                      .++..
T Consensus        74 ~~d~~   78 (132)
T d1lssa_          74 GKEEV   78 (132)
T ss_dssp             SCHHH
T ss_pred             CcHHH
Confidence            88654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.66  E-value=0.0032  Score=55.48  Aligned_cols=82  Identities=11%  Similarity=0.115  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .|++|||+||+|-+|...++.+...|.+|+++.+.........+..+.. +... +..+-.+.+.+.+..... .+|+++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~-~~~Dl~d~~~l~~~~~~~-~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQS-EIGDIRDQNKLLESIREF-QPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEE-EECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeE-EEeeccChHhhhhhhhhc-hhhhhh
Confidence            4689999999999999999999999999999987654333322222211 2222 222222333444433332 389999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .+++.
T Consensus        85 ~~aa~   89 (356)
T d1rkxa_          85 HMAAQ   89 (356)
T ss_dssp             ECCSC
T ss_pred             hhhcc
Confidence            98875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00062  Score=56.36  Aligned_cols=95  Identities=15%  Similarity=0.100  Sum_probs=61.1

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCC-------cEEEccCcccHHH
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGA-------DEVFTESQLEVKN  251 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga-------~~vi~~~~~~~~~  251 (378)
                      .+++|++||-.|+  +.|+.++.+|+..|  .+|+++..    .++-.+.+    +..+.       ..+...+...   
T Consensus        73 ~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~----~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~---  143 (224)
T d1i1na_          73 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDH----IKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM---  143 (224)
T ss_dssp             TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEES----CHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG---
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcC----CHHHHHHHHHhccccCcccccccceEEEEeeccc---
Confidence            6899999999996  77888899999876  37777763    45444443    22222       1122111110   


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                        ..... +.||+|+.+.+-+.+ ...++.|++||++|..-
T Consensus       144 --~~~~~-~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         144 --GYAEE-APYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             --CCGGG-CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --ccchh-hhhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence              00111 249999987765444 77889999999998754

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.59  E-value=0.0055  Score=48.76  Aligned_cols=100  Identities=10%  Similarity=-0.011  Sum_probs=62.1

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC----CCcE------EEccCc-c----
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GADE------VFTESQ-L----  247 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----ga~~------vi~~~~-~----  247 (378)
                      ...+.||++||..||  |.|..++.+|+. |++|+++.    -+++-.+.+++.    +...      ...... .    
T Consensus        15 ~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD----~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (201)
T d1pjza_          15 SLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAE----LSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG   87 (201)
T ss_dssp             HHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEE----ECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred             HcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeec----ccHHHHHHHHHHhccccchhhhhhhhhccccccceecc
Confidence            367899999999998  667889999874 99999987    467777777642    1110      000000 0    


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCc---------cHHHHHHhcccCCEEEEEe
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGN---------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~g  291 (378)
                      +...+......  .+|+|++...-.         .++...++|++||+++...
T Consensus        88 d~~~l~~~~~~--~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          88 DFFALTARDIG--HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             CCSSSTHHHHH--SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccccccccc--ceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            00011111111  389998865532         2366789999999987654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.58  E-value=0.006  Score=51.13  Aligned_cols=93  Identities=18%  Similarity=0.186  Sum_probs=57.9

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHHHHHHhcCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~i~~~~~~~  259 (378)
                      ..++|++||=.|++  .|..++.+++ .|++|+++..    +++..+.    ++..|... ++..+      +...... 
T Consensus       117 ~~~~g~~VLDiGcG--sG~l~i~aa~-~g~~V~gvDi----s~~av~~A~~na~~n~~~~~~~~~d------~~~~~~~-  182 (254)
T d2nxca1         117 HLRPGDKVLDLGTG--SGVLAIAAEK-LGGKALGVDI----DPMVLPQAEANAKRNGVRPRFLEGS------LEAALPF-  182 (254)
T ss_dssp             HCCTTCEEEEETCT--TSHHHHHHHH-TTCEEEEEES----CGGGHHHHHHHHHHTTCCCEEEESC------HHHHGGG-
T ss_pred             hcCccCEEEEcccc--hhHHHHHHHh-cCCEEEEEEC----ChHHHHHHHHHHHHcCCceeEEecc------ccccccc-
Confidence            36899999999983  4667765554 6899887763    4443333    34455432 22221      1122222 


Q ss_pred             CCCcEEEeCCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          260 PEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       260 g~~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                      +.+|+|+.+.....    +....+.|+|||++++.|
T Consensus       183 ~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         183 GPFDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            25999997665433    256779999999998765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.54  E-value=0.0052  Score=53.42  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=54.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC-CCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~-~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|||+||+|-+|...+..+...|.+|+++.+.. ....++...+...+--.++..+-.+.+.+.+...+.. +|+||.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~-~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYM-PDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHC-CSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcC-CceEEeec
Confidence            699999999999999998888899999875321 1233444455555444444444444455555544433 89999998


Q ss_pred             CC
Q 017064          270 GG  271 (378)
Q Consensus       270 g~  271 (378)
                      +.
T Consensus        81 a~   82 (338)
T d1orra_          81 GQ   82 (338)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0011  Score=46.45  Aligned_cols=83  Identities=14%  Similarity=0.116  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|+|.|. |..|+++++++...|++|++..+..  .++..+.++. +....+.....  ..+    .   .+|.++-
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~--~~~~~~~~~~-~~~~~~~~~~~--~~~----~---~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRM--TPPGLDKLPE-AVERHTGSLND--EWL----M---AADLIVA   70 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSS--SCTTGGGSCT-TSCEEESBCCH--HHH----H---HCSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCc--CchhHHHHhh-ccceeecccch--hhh----c---cCCEEEE
Confidence            4689999999 9999999999999999999887532  2222222222 33333332221  111    1   2899998


Q ss_pred             CCCCccHHHHHHhccc
Q 017064          268 CVGGNSASKVLKFLSQ  283 (378)
Q Consensus       268 ~~g~~~~~~~~~~l~~  283 (378)
                      +.|-+.-...++....
T Consensus        71 SPGi~~~~~~~~~a~~   86 (93)
T d2jfga1          71 SPGIALAHPSLSAAAD   86 (93)
T ss_dssp             CTTSCTTSHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHH
Confidence            8886554344433333

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.016  Score=49.40  Aligned_cols=81  Identities=11%  Similarity=0.053  Sum_probs=46.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC--CcHHH-HHHHHhC---CCcE-EEccCcccHHHHH---HHhcCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--GSDEA-KEKLKGL---GADE-VFTESQLEVKNVK---GLLANL  259 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~--~~~~~-~~~~~~~---ga~~-vi~~~~~~~~~i~---~~~~~~  259 (378)
                      +.|||+||++++|.+.+..+...|++++.+.....  ...++ .+.++++   +... .+..+-.+.+.+.   +.... 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence            34689999999999999998889998665542211  11222 2333333   3332 2322322222222   22222 


Q ss_pred             CCCcEEEeCCCC
Q 017064          260 PEPALGFNCVGG  271 (378)
Q Consensus       260 g~~Dvvid~~g~  271 (378)
                      |.+|++++++|.
T Consensus        82 g~idilvnnag~   93 (285)
T d1jtva_          82 GRVDVLVCNAGL   93 (285)
T ss_dssp             SCCSEEEECCCC
T ss_pred             cchhhhhhcccc
Confidence            359999999985

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.42  E-value=0.041  Score=42.02  Aligned_cols=101  Identities=16%  Similarity=0.094  Sum_probs=72.0

Q ss_pred             HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (378)
Q Consensus       176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~  254 (378)
                      .+.++.+..+ +-.|++++|.|= |-+|...++-+|.+|++|+++-.    ++-+.=.+.--|..         +..+.+
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~----DPi~alqA~mdGf~---------v~~~~~   74 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEI----DPICAIQAVMEGFN---------VVTLDE   74 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS----CHHHHHHHHTTTCE---------ECCHHH
T ss_pred             HHHHHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEec----CchhhHHHHhcCCc---------cCchhH
Confidence            4455555444 578999999998 99999999999999999998873    44332222222322         123444


Q ss_pred             HhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEecC
Q 017064          255 LLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~~  293 (378)
                      ...   ..|++|-++|+.. + ..-++.|+.+.-+...|..
T Consensus        75 a~~---~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          75 IVD---KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             HTT---TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             ccc---cCcEEEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence            443   3899999999854 3 7789999999999888843

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.37  E-value=0.0031  Score=50.31  Aligned_cols=96  Identities=16%  Similarity=0.215  Sum_probs=61.2

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-E--EEccCcccHHHHHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-E--VFTESQLEVKNVKGL  255 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~i~~~  255 (378)
                      ..++++|++||=.|+  +.|..++.+|+. +.+|+++.    .+++..+.+    +.+|.. .  ++..+   ..+.   
T Consensus        28 ~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD----~~~~~l~~a~~n~~~~gl~~~v~~~~gd---a~~~---   94 (186)
T d1l3ia_          28 LAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAID----RNPEAISTTEMNLQRHGLGDNVTLMEGD---APEA---   94 (186)
T ss_dssp             HHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEE----SCHHHHHHHHHHHHHTTCCTTEEEEESC---HHHH---
T ss_pred             hcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEec----CCHHHHHHHHHHHHHcCCCcceEEEECc---hhhc---
Confidence            478999999998887  556677777765 56888776    356655555    346642 2  22222   2222   


Q ss_pred             hcCCCCCcEEEeCCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          256 LANLPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                      ......+|.|+...+...    ++.+.+.|+|+|+++...
T Consensus        95 ~~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          95 LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            122225999986655432    467789999999987653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.33  E-value=0.05  Score=41.15  Aligned_cols=98  Identities=12%  Similarity=0.164  Sum_probs=68.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHH-----------------
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK-----------------  250 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-----------------  250 (378)
                      ++|.|+|++|.+|..+.++.+..  ..+|++.+-.. ..+.-.++++++...++.-.++....                 
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            78999999999999999999876  57888887542 23344567788999988755543222                 


Q ss_pred             -HHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEE
Q 017064          251 -NVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       251 -~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  290 (378)
                       .+.+....  .+|+++.+..+ .-+...+..++.|-++.+.
T Consensus        82 ~~l~~~~~~--~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          82 DALVEAAMM--GADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHHTS--CCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cchheeccc--ccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence             22222221  38999988655 5567788888888775543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0045  Score=51.73  Aligned_cols=50  Identities=18%  Similarity=0.185  Sum_probs=38.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      +|+.+||+||++++|.+.++.+...|++|+++.+..+   +..+..++++...
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~~~   53 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS---GGEAQAKKLGNNC   53 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS---SHHHHHHHHCTTE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHhCCCc
Confidence            5899999999999999999999999999998886532   2223445555443

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.31  E-value=0.0015  Score=54.84  Aligned_cols=99  Identities=12%  Similarity=0.069  Sum_probs=63.8

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHH----hCC-CcEEEccCcccHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLK----GLG-ADEVFTESQLEVKNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~----~~g-a~~vi~~~~~~~~~i~~  254 (378)
                      ...+++||++||=.|+  +.|.++..+|++.|.  +|+++.    .+++..+.++    +++ .+.+--... +   +..
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD----~~e~~~~~A~~n~~~~~~~~nv~~~~~-D---i~~  148 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVE----RDEDNLKKAMDNLSEFYDIGNVRTSRS-D---IAD  148 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEEC----SCHHHHHHHHHHHHTTSCCTTEEEECS-C---TTT
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEE----CCHHHHHHHHHHHHHhcCCCceEEEEe-e---eec
Confidence            3488999999999987  557888889998764  677766    3566666554    332 222211111 1   112


Q ss_pred             HhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..... .||.|+-....+  .+.++.+.|+|||+++...
T Consensus       149 ~~~~~-~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         149 FISDQ-MYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             CCCSC-CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ccccc-eeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            22222 499998655543  5689999999999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.031  Score=43.97  Aligned_cols=108  Identities=14%  Similarity=0.079  Sum_probs=62.1

Q ss_pred             HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhC----CCc-EEEccCcccHHH
Q 017064          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL----GAD-EVFTESQLEVKN  251 (378)
Q Consensus       178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~----ga~-~vi~~~~~~~~~  251 (378)
                      .++....---.+++|+|.|+ |+.|.+++..+...|++.+.++.......++. .+++++    ... .+.+..  +.+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~   83 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLA--DQQA   83 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT--CHHH
T ss_pred             HHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecc--cccc
Confidence            34554332235789999999 99999998888888996666554332233332 233322    221 112222  2233


Q ss_pred             HHHHhcCCCCCcEEEeCCCCccH-------HHHHHhcccCCEEEEEe
Q 017064          252 VKGLLANLPEPALGFNCVGGNSA-------SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~~-------~~~~~~l~~~G~~v~~g  291 (378)
                      +......   +|++|+|+.-...       ..-+..++++..++.+-
T Consensus        84 ~~~~~~~---~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          84 FAEALAS---ADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HHHHHHT---CSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             hhhhhcc---cceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            4443443   9999999863221       11245678888888775

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.23  E-value=0.0055  Score=48.09  Aligned_cols=98  Identities=12%  Similarity=0.111  Sum_probs=57.1

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC---CCcEEEccCcccHHHHHH
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL---GADEVFTESQLEVKNVKG  254 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~i~~  254 (378)
                      +|.......++++|+|.|+ |+.+.+++..+...+.+++++.|    +.++.+.+ +.+   +....+..+..       
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR----~~~~a~~l~~~~~~~~~~~~~~~~~~-------   75 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR----TFSKTKELAERFQPYGNIQAVSMDSI-------   75 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES----SHHHHHHHHHHHGGGSCEEEEEGGGC-------
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccc----hHHHHHHHHHHHhhccccchhhhccc-------
Confidence            3444333457889999999 99999999888777778777775    44444333 332   22222222111       


Q ss_pred             HhcCCCCCcEEEeCCCCccHH----HHHHhcccCCEEEEEe
Q 017064          255 LLANLPEPALGFNCVGGNSAS----KVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~~~~~----~~~~~l~~~G~~v~~g  291 (378)
                         ....+|++|+|+......    ...+.++++..++.+.
T Consensus        76 ---~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          76 ---PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             ---CCSCCSEEEECCCC-------CCCHHHHHHCSCEEESC
T ss_pred             ---cccccceeeecccccccccccchhhhhhcccceeeeee
Confidence               012499999998854321    1234456667666554

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.21  E-value=0.0024  Score=52.63  Aligned_cols=95  Identities=17%  Similarity=0.193  Sum_probs=57.9

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHc---C----CcEEEEecCCCCcHHHHHHHHh---------CCCc--EEEccCc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHR---G----IHSINIIRDRAGSDEAKEKLKG---------LGAD--EVFTESQ  246 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~---g----~~vi~~~~~~~~~~~~~~~~~~---------~ga~--~vi~~~~  246 (378)
                      .+++|++||..|+  +.|+.++.+++..   |    .+|+.+..    .++..+.+++         .+..  .++..+.
T Consensus        77 ~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~----~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~  150 (223)
T d1r18a_          77 HLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEH----QAELVRRSKANLNTDDRSMLDSGQLLIVEGDG  150 (223)
T ss_dssp             TCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEES----CHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEec----CHHHHHHHHHhhhhcchhhcCccEEEEEeccc
Confidence            7899999999996  6677776666654   3    37887763    4443333321         1211  2222221


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      ..     ..... +.||.|+-+.+-+.. ...++.|++||++|..-
T Consensus       151 ~~-----~~~~~-~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pv  190 (223)
T d1r18a_         151 RK-----GYPPN-APYNAIHVGAAAPDTPTELINQLASGGRLIVPV  190 (223)
T ss_dssp             GG-----CCGGG-CSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cc-----ccccc-cceeeEEEEeechhchHHHHHhcCCCcEEEEEE
Confidence            10     00111 249999887776554 67789999999998753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.20  E-value=0.017  Score=45.08  Aligned_cols=95  Identities=15%  Similarity=0.138  Sum_probs=61.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +++|||.|+ |.+|..+++.+...|.+|+++.|    +.++.+.+.+ ++...+................   ..|.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr----~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR----TLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEES----CHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC----ChHHHHHHHhcccccccccccccchhhhHhhhh---ccceeEe
Confidence            689999998 99999999988888999888874    5666666554 5443333222222223333333   3888888


Q ss_pred             CCCCccH-HHHHHhcccCCEEEEEe
Q 017064          268 CVGGNSA-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~~~G~~v~~g  291 (378)
                      +...... .....++..+..++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          74 LIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             eccchhhhHHHHHHHhhccceeecc
Confidence            7776444 44456666666666543

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.20  E-value=0.00098  Score=55.42  Aligned_cols=99  Identities=11%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNVK  253 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i~  253 (378)
                      +.+.+.++||++||=.|+  |.|..+..+++. +++++++.    -+++-.+.+    +..|.+.  ++..+.   +++ 
T Consensus         8 l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD----~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVD----ATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEE----SCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-
T ss_pred             HHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEe----CChhhhhhhhhhhccccccccccccccc---ccc-
Confidence            556789999999999997  667777888774 78888776    355544444    3344332  121111   111 


Q ss_pred             HHhcCCCCCcEEEeCCCCc-------cHHHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVGGN-------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g  291 (378)
                      .. +. +.||+|+.+-.-.       .++.+.+.|+|||.++...
T Consensus        77 ~~-~~-~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          77 PF-PD-DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             CS-CT-TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cc-cc-cccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            01 11 2599999755421       2477889999999988764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.17  E-value=0.0052  Score=50.38  Aligned_cols=73  Identities=16%  Similarity=0.211  Sum_probs=48.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCc--EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIH--SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~--vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+|||+||+|.+|...+..+...|.+  |+...|    ++++...+. -+... +..+-.+.+...+...+   +|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R----~~~~~~~~~-~~~~~-~~~d~~~~~~~~~~~~~---~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR----SAQGKEKIG-GEADV-FIGDITDADSINPAFQG---IDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEES----CHHHHHHTT-CCTTE-EECCTTSHHHHHHHHTT---CSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcC----CHHHHHhcc-CCcEE-EEeeecccccccccccc---ceeeEE
Confidence            58999999999999999999888865  444553    444443322 23333 33333444556665554   999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.12  E-value=0.0064  Score=51.28  Aligned_cols=83  Identities=16%  Similarity=0.126  Sum_probs=53.7

Q ss_pred             cCCCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE---EccCcc-c----HHHHHH
Q 017064          186 LNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV---FTESQL-E----VKNVKG  254 (378)
Q Consensus       186 ~~~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v---i~~~~~-~----~~~i~~  254 (378)
                      +-.|+++||+|++  .++|.+.++.+...|++|+.+.+.   .++..+.+ +.++....   .|..+. +    .+.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~---~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD---RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC---hHHHHHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence            4468999999964  469999988888999999988753   33332333 44554322   222221 1    234555


Q ss_pred             HhcCCCCCcEEEeCCCC
Q 017064          255 LLANLPEPALGFNCVGG  271 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~  271 (378)
                      .....+.+|++++++|.
T Consensus        80 ~~~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGF   96 (268)
T ss_dssp             HHCTTCCEEEEEECCCC
T ss_pred             ccccCCCcceeeecccc
Confidence            55555568999999983

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.05  E-value=0.0079  Score=52.76  Aligned_cols=80  Identities=9%  Similarity=0.040  Sum_probs=52.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH---HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA---KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~---~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +.|||+||+|-+|...+..+...|.+|+++.+......+.   .+....-+...+ ..+-.+.+.+.+.....+ +|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~~-~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY-EVDLCDRKGLEKVFKEYK-IDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEE-ECCTTCHHHHHHHHHHSC-CCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEE-EeecCCHHHHHHHHhccC-CCEEE
Confidence            5799999999999999988888899999876432222222   222233344333 223234455666554444 99999


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .+++.
T Consensus        80 hlAa~   84 (347)
T d1z45a2          80 HFAGL   84 (347)
T ss_dssp             ECCSC
T ss_pred             Ecccc
Confidence            99875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.023  Score=49.38  Aligned_cols=79  Identities=11%  Similarity=0.056  Sum_probs=51.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH---HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE---KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~---~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|||+||+|-+|...+..+...|.+|+++.+..........   ....-+...+ ..+-.+.+.+.+.....+ +|+||.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~l~~~~~~~~-~d~ViH   79 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV-EGDIRNEALMTEILHDHA-IDTVIH   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEE-ECCTTCHHHHHHHHHHTT-CSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEE-EeecCCHHHHHHHHhccC-CCEEEE
Confidence            49999999999999999998899999998654322332222   2223334332 233333455555544333 999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        80 lAa~   83 (338)
T d1udca_          80 FAGL   83 (338)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            8864

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.98  E-value=0.0017  Score=55.67  Aligned_cols=101  Identities=14%  Similarity=0.018  Sum_probs=65.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i  252 (378)
                      +...+.+.+|++||=.|+  |.|..+..+++..|++|+++.    -++...+.++    ..|..   .++..+-.   + 
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD----~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~---~-  128 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLN----IAPVQNKRNEEYNNQAGLADNITVKYGSFL---E-  128 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHHTCTTTEEEEECCTT---S-
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEe----ccchhhhhhhcccccccccccccccccccc---c-
Confidence            445567899999999997  467788889988899998877    3555544443    33432   22222211   1 


Q ss_pred             HHHhcCCCCCcEEEeCCCC-------ccHHHHHHhcccCCEEEEEec
Q 017064          253 KGLLANLPEPALGFNCVGG-------NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       253 ~~~~~~~g~~Dvvid~~g~-------~~~~~~~~~l~~~G~~v~~g~  292 (378)
                        +.-..+.||+|+..-.-       ..++.+.+.|+|||+++....
T Consensus       129 --l~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         129 --IPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             --CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --ccccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence              11111359999864432       124788899999999988753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.93  E-value=0.011  Score=51.80  Aligned_cols=81  Identities=14%  Similarity=0.163  Sum_probs=51.5

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-----CCC--cEEEccCcccHHHHHHHh
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-----LGA--DEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-----~ga--~~vi~~~~~~~~~i~~~~  256 (378)
                      .-+.+|++|||+|++|-+|...++.+...|.+|++++|.    .++...++.     ...  ...+..+-.+...+....
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC----chhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            346789999999999999999998888889999999963    344333321     111  122222211222333333


Q ss_pred             cCCCCCcEEEeCCCC
Q 017064          257 ANLPEPALGFNCVGG  271 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~  271 (378)
                      .   ++|.++.+++.
T Consensus        82 ~---~~~~v~~~a~~   93 (342)
T d1y1pa1          82 K---GAAGVAHIASV   93 (342)
T ss_dssp             T---TCSEEEECCCC
T ss_pred             c---cchhhhhhccc
Confidence            3   38999988875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.92  E-value=0.023  Score=44.53  Aligned_cols=91  Identities=10%  Similarity=0.093  Sum_probs=59.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-------ccHHHHHHHhcCCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-------LEVKNVKGLLANLPEP  262 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-------~~~~~i~~~~~~~g~~  262 (378)
                      +++.|.|+ |.+|++.+..+...|..|.++.+    .+++.+.+++.|.........       .....+.+...   ..
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~a   73 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDI----DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK---DA   73 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT---TC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc---CC
Confidence            68999999 99999999999999999999884    677777776655322211110       00112333333   39


Q ss_pred             cEEEeCCCCccHHHHH----HhcccCCEEE
Q 017064          263 ALGFNCVGGNSASKVL----KFLSQGGTMV  288 (378)
Q Consensus       263 Dvvid~~g~~~~~~~~----~~l~~~G~~v  288 (378)
                      |++|-++........+    .++.++-.++
T Consensus        74 D~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             CEEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            9999999877665444    4455555444

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.89  E-value=0.009  Score=50.74  Aligned_cols=32  Identities=16%  Similarity=0.139  Sum_probs=28.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+||+|+++++|.+.++.+...|++|+++.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~   35 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   35 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            46999999999999999999999999988754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.88  E-value=0.02  Score=42.52  Aligned_cols=92  Identities=12%  Similarity=0.074  Sum_probs=62.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +++|.|+ |.+|+..++.+...|..|+++.    .++++.+.+++.|...++ .+..+.+.+.+..-.  .+|.+|-+++
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid----~d~~~~~~~~~~~~~~~~-gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVD----INEEKVNAYASYATHAVI-ANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEE----SCHHHHHHTTTTCSEEEE-CCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEec----CcHHHHHHHHHhCCccee-eecccchhhhccCCc--cccEEEEEcC
Confidence            5788898 9999999999999999999887    588888888888876554 344333334443111  3899998888


Q ss_pred             CccHH----HHHHhcccCCEEEEE
Q 017064          271 GNSAS----KVLKFLSQGGTMVTY  290 (378)
Q Consensus       271 ~~~~~----~~~~~l~~~G~~v~~  290 (378)
                      .+...    .......+..+++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          74 ANIQASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             SCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             chHHhHHHHHHHHHHcCCCcEEee
Confidence            75432    222334445565544

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0078  Score=49.52  Aligned_cols=105  Identities=13%  Similarity=0.023  Sum_probs=65.1

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEE------------EccCc
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEV------------FTESQ  246 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~v------------i~~~~  246 (378)
                      +.....+.++.+||..||  |.|..+..+|+ .|++|+++.    .+++..+.+++ .+....            .....
T Consensus        37 ~~~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD----~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (229)
T d2bzga1          37 LDTFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVE----ISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSS  109 (229)
T ss_dssp             HHHHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEEC----SCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEe----CCHHHHHHHHHHhhccccccchhcccccceeeecC
Confidence            334456789999999998  55888888887 599998887    57777776653 222111            10000


Q ss_pred             cc----HHHHHHHh-cCCCCCcEEEeCCCCc---------cHHHHHHhcccCCEEEEEe
Q 017064          247 LE----VKNVKGLL-ANLPEPALGFNCVGGN---------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       247 ~~----~~~i~~~~-~~~g~~Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..    ...+..+. ...+.+|+|+++..-.         .+....++|+|||+++...
T Consensus       110 ~~v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         110 GNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             SSEEEEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CcEEEEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            00    01122221 1122489999876521         2267789999999987665

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.83  E-value=0.025  Score=50.46  Aligned_cols=109  Identities=20%  Similarity=0.212  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh---------------C
Q 017064          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG---------------L  236 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~---------------~  236 (378)
                      +......+. ..++++|+++|=+|+  |.|..+.++|+..|+ +++++.    -++...+.++.               .
T Consensus       202 ~~~i~~Il~-~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GID----iS~~~i~~Ak~~~~e~~~~~~~~g~~~  274 (406)
T d1u2za_         202 PNFLSDVYQ-QCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCE----IMDDASDLTILQYEELKKRCKLYGMRL  274 (406)
T ss_dssp             HHHHHHHHH-HTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEE----CCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred             HHHHHHHHH-HhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHHHHHHhhhhhhhcccc
Confidence            334445554 488999999888886  889999999999987 677776    35555444432               1


Q ss_pred             CCcEE-EccCcccHHHHHHHhcCCCCCcEEEeCCC-C-c----cHHHHHHhcccCCEEEEEe
Q 017064          237 GADEV-FTESQLEVKNVKGLLANLPEPALGFNCVG-G-N----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       237 ga~~v-i~~~~~~~~~i~~~~~~~g~~Dvvid~~g-~-~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      +.... +..+.............   +|+++-..- . +    .+...++.|+|||++|..-
T Consensus       275 ~~~~~~~~~~f~~~~~~d~~~~~---adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         275 NNVEFSLKKSFVDNNRVAELIPQ---CDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CCEEEEESSCSTTCHHHHHHGGG---CSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccceeeeeechhhcccccccccc---ceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            22122 11111122333333333   888874322 1 2    2367788999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.012  Score=42.41  Aligned_cols=36  Identities=17%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             cCCC-CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          186 LNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       186 ~~~g-~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.++ .+|.|+|+ |.+|.+.++-|+.+|.++++....
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~   43 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRY   43 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            3444 46999998 999999999999999999988744

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.71  E-value=0.0017  Score=53.58  Aligned_cols=99  Identities=10%  Similarity=0.128  Sum_probs=63.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNVK  253 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i~  253 (378)
                      +.+.++++++++||=.|+  |.|..+..+++. |++++++.    -+++-.+.+    ...|.+.  ++..+..   .+ 
T Consensus         7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD----~s~~~i~~A~~~~~~~~~~~i~~~~~d~~---~l-   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFD----LTEDILKVARAFIEGNGHQQVEYVQGDAE---QM-   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-
T ss_pred             HHHhcCCCCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEE----CCHHHHhhhhhcccccccccccccccccc---cc-
Confidence            445689999999999998  367777777754 78888776    355544444    3455442  2222211   11 


Q ss_pred             HHhcCCCCCcEEEeCCCC-------ccHHHHHHhcccCCEEEEEe
Q 017064          254 GLLANLPEPALGFNCVGG-------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       254 ~~~~~~g~~Dvvid~~g~-------~~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+..  +.||+|+..-.-       ..+....+.|+|||+++...
T Consensus        76 ~~~~--~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          76 PFTD--ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             CSCT--TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccc--cccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            1111  259999866542       12478899999999998764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.66  E-value=0.013  Score=49.11  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=28.0

Q ss_pred             CCCEEEEeCCCchHHHHHHH-HHH--HcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQ-IAR--HRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~-la~--~~g~~vi~~~~  221 (378)
                      .|+.++|+|+++++|.+.++ +|+  ..|++|+++.|
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r   41 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR   41 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEEC
Confidence            46889999999999998775 455  36999999985

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.62  E-value=0.029  Score=44.94  Aligned_cols=79  Identities=19%  Similarity=0.266  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.+|+|.|. |.+|..+++.+...|++|++..    .+.++......+|++.+ ..+     +   +..-  ..|+.+-
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d----~d~~~~~~~~~~g~~~~-~~~-----~---~~~~--~~DI~iP   89 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVAD----TDTERVAHAVALGHTAV-ALE-----D---VLST--PCDVFAP   89 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEEC-CGG-----G---GGGC--CCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEec----chHHHHHHHHhhccccc-Ccc-----c---cccc--cceeeec
Confidence            5789999998 9999999999999999998665    46777777778887643 111     1   1222  4899998


Q ss_pred             CCCCccH-HHHHHhcc
Q 017064          268 CVGGNSA-SKVLKFLS  282 (378)
Q Consensus       268 ~~g~~~~-~~~~~~l~  282 (378)
                      |+.+..+ ......++
T Consensus        90 cA~~~~I~~~~a~~i~  105 (201)
T d1c1da1          90 CAMGGVITTEVARTLD  105 (201)
T ss_dssp             CSCSCCBCHHHHHHCC
T ss_pred             ccccccccHHHHhhhh
Confidence            8776554 44555554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.60  E-value=0.079  Score=40.04  Aligned_cols=98  Identities=12%  Similarity=0.195  Sum_probs=67.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHH-----------------
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK-----------------  250 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-----------------  250 (378)
                      ++|.|+|++|.+|..+..+.+..  ..+|++.+-.. ..+.-.++++++...+++-.++....                 
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            36899999999999999999977  46888877542 23334456778888888766543221                 


Q ss_pred             ---HHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEE
Q 017064          251 ---NVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVT  289 (378)
Q Consensus       251 ---~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~  289 (378)
                         .+.++.... ++|+|+.+..+ .-+...+..++.|-++.+
T Consensus        81 g~~~l~~~~~~~-~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          81 GQQAACDMAALE-DVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             SHHHHHHHHTCT-TCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             ChHHHHHHhcCC-CCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence               222322222 38999988776 445777788887776544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.59  E-value=0.024  Score=47.36  Aligned_cols=32  Identities=19%  Similarity=0.315  Sum_probs=29.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.||+|+++++|.+.++.+...|++|+.+.+.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~   34 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH   34 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            57999999999999999999999999999864

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.54  E-value=0.034  Score=48.50  Aligned_cols=77  Identities=22%  Similarity=0.294  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CCcEEEccCccc-HHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GADEVFTESQLE-VKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvv  265 (378)
                      ..++|+|+||+|.+|...+..+...|.+|++++|+.. + .+...+... |++ ++..+-.+ .+.+.....+   .|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~-~~~~~~~~~~~v~-~~~gD~~d~~~~~~~a~~~---~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-G-LIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEG---AHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-S-HHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTT---CSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc-h-hhhhhhcccCCCE-EEEeeCCCcHHHHHHHhcC---CceE
Confidence            4579999999999999999999999999999998642 2 233333443 444 33333222 2334555543   7777


Q ss_pred             EeCCC
Q 017064          266 FNCVG  270 (378)
Q Consensus       266 id~~g  270 (378)
                      +....
T Consensus        76 ~~~~~   80 (350)
T d1xgka_          76 FINTT   80 (350)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            76554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.52  E-value=0.022  Score=50.65  Aligned_cols=32  Identities=9%  Similarity=0.103  Sum_probs=28.5

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      |.+|||+|++|-+|...+..+...|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999998874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.015  Score=47.76  Aligned_cols=77  Identities=18%  Similarity=0.313  Sum_probs=48.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+++|||+||+|.+|...++.+...|.  +|++++|........  ...  ..... ..+-.+.+.+.+...+   +|++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~--~~~--~i~~~-~~D~~~~~~~~~~~~~---~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE--AYK--NVNQE-VVDFEKLDDYASAFQG---HDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG--GGG--GCEEE-ECCGGGGGGGGGGGSS---CSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc--ccc--eeeee-eecccccccccccccc---cccc
Confidence            447999999999999999998887785  788888753221111  111  11211 1222223445554443   9999


Q ss_pred             EeCCCCc
Q 017064          266 FNCVGGN  272 (378)
Q Consensus       266 id~~g~~  272 (378)
                      |.|+|..
T Consensus        85 i~~~~~~   91 (232)
T d2bkaa1          85 FCCLGTT   91 (232)
T ss_dssp             EECCCCC
T ss_pred             ccccccc
Confidence            9999863

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.44  E-value=0.05  Score=46.05  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHH---HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEA---KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~---~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      .+|||+||+|.+|...+..+...|.+|++++|.... ...+   ...+...+++.+ ..+-.+.+.+.+...+   .+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v-~~d~~d~~~~~~~~~~---~~~~   79 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASLDDHQRLVDALKQ---VDVV   79 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCSSCHHHHHHHHTT---CSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEE-EeecccchhhhhhccC---cchh
Confidence            569999999999999999888899999999986432 2222   333345566544 2333344556665554   7888


Q ss_pred             EeCCCC
Q 017064          266 FNCVGG  271 (378)
Q Consensus       266 id~~g~  271 (378)
                      +.+.+.
T Consensus        80 ~~~~~~   85 (312)
T d1qyda_          80 ISALAG   85 (312)
T ss_dssp             EECCCC
T ss_pred             hhhhhh
Confidence            888764

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.013  Score=48.24  Aligned_cols=96  Identities=10%  Similarity=0.052  Sum_probs=59.5

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC----CcEEEccCcccHHHHHHHhcCCCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG----ADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g----a~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      ..+|.+||-.|+  |.|..+..++++.+.+++++.    -+++-.+.+++..    ....+.  ..+...+...... +.
T Consensus        51 ~~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id----~s~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~  121 (229)
T d1zx0a1          51 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIE----CNDGVFQRLRDWAPRQTHKVIPL--KGLWEDVAPTLPD-GH  121 (229)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEE----CCHHHHHHHHHHGGGCSSEEEEE--ESCHHHHGGGSCT-TC
T ss_pred             ccCCCeEEEeec--cchHHHHHHHHcCCCeEEEeC----CCHHHHHHHHHHhhhcccccccc--ccccccccccccc-cc
Confidence            367899999997  677888899987777887765    4677777766432    211111  1122222222222 24


Q ss_pred             CcEEE-eCCCCc-----------cHHHHHHhcccCCEEEEE
Q 017064          262 PALGF-NCVGGN-----------SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       262 ~Dvvi-d~~g~~-----------~~~~~~~~l~~~G~~v~~  290 (378)
                      ||.++ |.....           .+..+.+.|+|||.+++.
T Consensus       122 fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         122 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            88885 655432           124577899999999764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.39  E-value=0.009  Score=47.75  Aligned_cols=87  Identities=20%  Similarity=0.193  Sum_probs=58.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|.|. |.+|...+++++.+|++|++..+.....     .....+....        ..+.++...   .|+|+-
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-----~~~~~~~~~~--------~~l~~ll~~---sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDG-----VERALGLQRV--------STLQDLLFH---SDCVTL  110 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTT-----HHHHHTCEEC--------SSHHHHHHH---CSEEEE
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCccccc-----chhhhccccc--------cchhhcccc---CCEEEE
Confidence            4789999999 9999999999999999999877432111     1112232211        123333332   788887


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++.. +.    + ...++.|+++..+|.++
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecC
Confidence            6653 21    1 67789999999888876

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.38  E-value=0.034  Score=42.84  Aligned_cols=85  Identities=20%  Similarity=0.178  Sum_probs=56.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-cEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|.|.|+ |.+|...+..++..|.+|++..+    ++++.+.+++.|. +...+..+    .    ..   ..|+||-|+
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~----~~~~~~~a~~~~~~~~~~~~~~----~----~~---~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSR----QQSTCEKAVERQLVDEAGQDLS----L----LQ---TAKIIFLCT   65 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHTTSCSEEESCGG----G----GT---TCSEEEECS
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEEC----CchHHHHHHHhhccceeeeecc----c----cc---ccccccccC
Confidence            4789998 99999888888888999988763    6777888888774 33332211    1    11   388888888


Q ss_pred             CCccHHHH----HHhcccCCEEEEEe
Q 017064          270 GGNSASKV----LKFLSQGGTMVTYG  291 (378)
Q Consensus       270 g~~~~~~~----~~~l~~~G~~v~~g  291 (378)
                      ........    ...+.++--++.++
T Consensus        66 p~~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PIQLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CHHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cHhhhhhhhhhhhhhcccccceeecc
Confidence            65444333    34444555555444

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.37  E-value=0.023  Score=45.38  Aligned_cols=84  Identities=15%  Similarity=0.101  Sum_probs=57.6

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |.+|.|+|. |.+|...+++++.+|++|++..+.  .+.+.    ...+..      .   ..+.++...   .|+++.+
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~--~~~~~----~~~~~~------~---~~l~~~l~~---sDii~~~  103 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIF--RNPEL----EKKGYY------V---DSLDDLYKQ---ADVISLH  103 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS--CCHHH----HHTTCB------C---SCHHHHHHH---CSEEEEC
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcccccccCcc--ccccc----ccceee------e---ccccccccc---ccccccc
Confidence            789999999 999999999999999999887532  12211    111211      1   123333332   8998887


Q ss_pred             CCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +.- +.    + .+.++.|+++..+|.++
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         104 VPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             CCccccccccccHHHHhhhCCccEEEecC
Confidence            763 21    2 67889999998888875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.36  E-value=0.022  Score=49.32  Aligned_cols=81  Identities=10%  Similarity=0.170  Sum_probs=49.6

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-CcHHHHHHH----HhC--CCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKL----KGL--GADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-~~~~~~~~~----~~~--ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      +++||+||+|-+|...+..+...|.+|+++++... .+.++.+.+    ...  ....++..+-.+.+.+.+.....+ +
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~-~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK-P   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC-C
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhc-c
Confidence            57999999999999999999989999999987421 011111111    011  112222233233444554433333 9


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      |+|+.+++.
T Consensus        81 D~Vih~Aa~   89 (339)
T d1n7ha_          81 DEVYNLAAQ   89 (339)
T ss_dssp             SEEEECCSC
T ss_pred             chhhhcccc
Confidence            999999985

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.33  E-value=0.015  Score=45.97  Aligned_cols=86  Identities=19%  Similarity=0.123  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|.++.|.|. |.+|+..+++++.+|++|++..+..  .++.   ....+...      .   .+.++...   .|+|+-
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~--~~~~---~~~~~~~~------~---~l~ell~~---sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYV--SPAR---AAQLGIEL------L---SLDDLLAR---ADFISV  104 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS--CHHH---HHHHTCEE------C---CHHHHHHH---CSEEEE
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCC--ChhH---HhhcCcee------c---cHHHHHhh---CCEEEE
Confidence            4689999999 9999999999999999999876431  2222   12223221      1   22333332   889887


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++.- +.    + ...++.|+++..+|.++
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEec
Confidence            7653 22    2 67889999999988876

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.30  E-value=0.013  Score=43.39  Aligned_cols=94  Identities=13%  Similarity=0.097  Sum_probs=60.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|.|+|++|-+|+...++++..+.+++...+..  +            ...              .   ..+|++||.+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~--~------------~~~--------------~---~~~DVvIDFS~   50 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN--G------------VEE--------------L---DSPDVVIDFSS   50 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT--E------------EEE--------------C---SCCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC--c------------HHH--------------h---ccCCEEEEecC
Confidence            589999999999999999999999888776321  0            000              0   14899999999


Q ss_pred             CccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEE
Q 017064          271 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF  315 (378)
Q Consensus       271 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  315 (378)
                      .+.+...++.....+.=+.+|.+...+.......-..+.+.+...
T Consensus        51 p~~~~~~l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~a   95 (128)
T d1vm6a3          51 PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQA   95 (128)
T ss_dssp             GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEEC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCEEee
Confidence            888876666555555556677554333333322233455555443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.024  Score=43.62  Aligned_cols=97  Identities=18%  Similarity=0.168  Sum_probs=68.5

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      ..+||++...+..|....---.|++|+|.|.+..+|.-...++...|++|+++- ..  +.                   
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h-~~--t~-------------------   72 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH-RF--TK-------------------   72 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC-SS--CS-------------------
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccc-cc--cc-------------------
Confidence            456666666776676644456799999999999999999999999999986543 21  10                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                          .+.+.+.   ..|++|-++|.+.+-. -++++++-.++.+|..
T Consensus        73 ----~l~~~~~---~ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          73 ----NLRHHVE---NADLLIVAVGKPGFIP-GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ----CHHHHHH---HCSEEEECSCCTTCBC-TTTSCTTCEEEECCCE
T ss_pred             ----hhHHHHh---hhhHhhhhccCccccc-ccccCCCcEEEecCce
Confidence                1112222   2899999999765411 2578899999998843

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.25  E-value=0.012  Score=48.42  Aligned_cols=93  Identities=14%  Similarity=0.152  Sum_probs=65.3

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      .+.++.+||=.|+  |.|..+..+++ .|++|+++.    .+++..+.+++.+....+..+..+   + ....  +.||+
T Consensus        39 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD----~s~~~l~~a~~~~~~~~~~~~~~~---l-~~~~--~~fD~  105 (246)
T d2avna1          39 YLKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVD----PSKEMLEVAREKGVKNVVEAKAED---L-PFPS--GAFEA  105 (246)
T ss_dssp             HCCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEE----SCHHHHHHHHHHTCSCEEECCTTS---C-CSCT--TCEEE
T ss_pred             hcCCCCEEEEECC--CCchhcccccc-cceEEEEee----cccccccccccccccccccccccc---c-cccc--ccccc
Confidence            3567889998887  57888888886 489988887    578888889887766665544322   1 1111  25999


Q ss_pred             EEeCCCC--------ccHHHHHHhcccCCEEEEE
Q 017064          265 GFNCVGG--------NSASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       265 vid~~g~--------~~~~~~~~~l~~~G~~v~~  290 (378)
                      |+.....        ..+....+.|+|||.++..
T Consensus       106 ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         106 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            9865442        1236778999999998764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.11  E-value=0.007  Score=50.93  Aligned_cols=98  Identities=16%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh----C---CCcEE-EccCcccHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----L---GADEV-FTESQLEVKN  251 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~---ga~~v-i~~~~~~~~~  251 (378)
                      ...+++||++||=.|+  +.|.++..+|+..|.  +|+++.    .+++..+.+++    +   ..+.+ +...+     
T Consensus        90 ~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d----~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d-----  158 (264)
T d1i9ga_          90 HEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYE----QRADHAEHARRNVSGCYGQPPDNWRLVVSD-----  158 (264)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHHTSCCTTEEEECSC-----
T ss_pred             HHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEec----CCHHHHHHHHHhhhhhccCCCceEEEEecc-----
Confidence            4589999999998886  778999999999875  676665    46666666543    1   11211 11111     


Q ss_pred             HHHH-hcCCCCCcEEEeCCCC--ccHHHHHHhcccCCEEEEEe
Q 017064          252 VKGL-LANLPEPALGFNCVGG--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       252 i~~~-~~~~g~~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +... ... +.||.||-....  ..+..+.+.|+|||+++.+.
T Consensus       159 ~~~~~~~~-~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         159 LADSELPD-GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             GGGCCCCT-TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccC-CCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            1111 112 249988866665  34588999999999998764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0086  Score=51.82  Aligned_cols=38  Identities=11%  Similarity=0.185  Sum_probs=26.9

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEe
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINII  220 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~  220 (378)
                      +.+...+.+|++||-.|+ | .|.+++.+|++ |+ +|+++.
T Consensus        27 i~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~~-Ga~~V~aid   65 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGC-G-TGILSMFAAKA-GAKKVLGVD   65 (311)
T ss_dssp             HHHCGGGTTTCEEEEETC-T-TSHHHHHHHHT-TCSEEEEEE
T ss_pred             HHhccccCCcCEEEEECC-C-CCHHHHHHHHc-CCCEEEEEe
Confidence            445456778999999998 3 66777777765 76 566554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.00  E-value=0.012  Score=50.43  Aligned_cols=34  Identities=12%  Similarity=0.067  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.+
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~   42 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            579999999976  8999999999999999988874

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.98  E-value=0.019  Score=50.42  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=46.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHh----CCCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      +.|||+||+|-+|...+..+...|.+|+++.+.... +.++.+.+..    .... .++..+-.+.+.+.+...+.. +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ-PD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC-CS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccC-CC
Confidence            578999999999999999998889999998864211 1222222211    1111 122222234455665555433 89


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +|+.+++.
T Consensus        81 ~v~h~aa~   88 (357)
T d1db3a_          81 EVYNLGAM   88 (357)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeecc
Confidence            99999874

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.95  E-value=0.019  Score=47.04  Aligned_cols=98  Identities=15%  Similarity=0.146  Sum_probs=63.4

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhc
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      ..++||++||=.|+  +.|..+..+|+..|.  +|+++.    -+++..+.++    ..+....+..+..........  
T Consensus        69 l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD----~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~--  140 (227)
T d1g8aa_          69 FPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIE----FSPRVLRELVPIVEERRNIVPILGDATKPEEYRAL--  140 (227)
T ss_dssp             CCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTT--
T ss_pred             cccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEe----CcHHHHHHHHHHHHhcCCceEEEEECCCccccccc--
Confidence            57899999999997  678889999998864  788776    4666655554    333333332222222221111  


Q ss_pred             CCCCCcEEEeCCCCc-----cHHHHHHhcccCCEEEEE
Q 017064          258 NLPEPALGFNCVGGN-----SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       258 ~~g~~Dvvid~~g~~-----~~~~~~~~l~~~G~~v~~  290 (378)
                       ...+|+++.....+     .+..+.+.|++||.++.+
T Consensus       141 -~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         141 -VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             12488888655432     246778999999998865

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.95  E-value=0.15  Score=39.37  Aligned_cols=98  Identities=15%  Similarity=0.200  Sum_probs=66.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----------HHHHHHhcCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----------KNVKGLLANL  259 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----------~~i~~~~~~~  259 (378)
                      +|.|.|- |-+|...++.+... ...++.+.+.  ...+....+...+.+......+...          ..+.....  
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   78 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE--   78 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT--
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecC--CChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhc--
Confidence            6889998 99999988877654 4688888765  3445555667777665442222110          01222222  


Q ss_pred             CCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCC
Q 017064          260 PEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       260 g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  294 (378)
                       ++|+|+||+|.... +.+-.++..|-+.|..+...
T Consensus        79 -~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 -KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             -TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             -cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence             39999999998654 66678889999999887544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=94.94  E-value=0.07  Score=44.76  Aligned_cols=79  Identities=20%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--cHHHHHHH---HhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--~~~~~~~~---~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      ++|||+||+|.+|...+..+...|.+|++++|....  ..++...+   ...+++ ++..+-.+.....+...+   .+.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~---~~~   79 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVKN---VDV   79 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHHT---CSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcE-EEEeecccchhhhhhhhh---cee
Confidence            679999999999999999998889999999976432  22233333   233443 343343344444454443   888


Q ss_pred             EEeCCCCc
Q 017064          265 GFNCVGGN  272 (378)
Q Consensus       265 vid~~g~~  272 (378)
                      ++.+.+..
T Consensus        80 vi~~~~~~   87 (307)
T d1qyca_          80 VISTVGSL   87 (307)
T ss_dssp             EEECCCGG
T ss_pred             eeeccccc
Confidence            88888753

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.93  E-value=0.049  Score=44.47  Aligned_cols=104  Identities=13%  Similarity=0.093  Sum_probs=64.3

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccH-HHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV-KNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~-~~i~~  254 (378)
                      .+.+....++||=.|  +..|+.++.+|+++  +.+++.+..    +++..+.+    +..|.+.-+.....+. +.+.+
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~----~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~  126 (227)
T d1susa1          53 MLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDI----NKENYELGLPVIKKAGVDHKIDFREGPALPVLDE  126 (227)
T ss_dssp             HHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEES----CCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred             HHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEec----cchhHHHHHHHHHHhccccceeeeehHHHHHHHH
Confidence            334455668999998  58899999999977  457776663    44444444    4567654333222222 22333


Q ss_pred             Hhc---CCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064          255 LLA---NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       255 ~~~---~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      +..   ..+.||.||--+...    .++.++..|++||.++.=.
T Consensus       127 l~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         127 MIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             HHHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             HHhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            321   123599998544432    3478899999999987643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.92  E-value=0.032  Score=47.86  Aligned_cols=79  Identities=15%  Similarity=0.271  Sum_probs=48.6

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc---EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~---~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++|||+|++|-+|...+..+...|.+|+++.+...  ....+.++.++.+   .++..+-.+...+.+..... ..++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC--cccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-cccccc
Confidence            47999999999999999988888999999987532  1122333333322   22222222333444433322 277888


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .++..
T Consensus        78 ~~a~~   82 (321)
T d1rpna_          78 NLAAQ   82 (321)
T ss_dssp             ECCSC
T ss_pred             ccccc
Confidence            77764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.89  E-value=0.17  Score=43.51  Aligned_cols=80  Identities=6%  Similarity=0.080  Sum_probs=51.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC------cEEEccCcccHHHHHHHhcCCCCC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga------~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .++|||+|++|-+|...+..+...|.+|+++++......+..+..+.+..      -.++..+..+.........+   .
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~---~   92 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG---V   92 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT---C
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc---c
Confidence            37899999999999999999999999999987544344544444433221      22333343344444443332   7


Q ss_pred             cEEEeCCCC
Q 017064          263 ALGFNCVGG  271 (378)
Q Consensus       263 Dvvid~~g~  271 (378)
                      +.++.+...
T Consensus        93 ~~v~~~~a~  101 (341)
T d1sb8a_          93 DYVLHQAAL  101 (341)
T ss_dssp             SEEEECCSC
T ss_pred             ccccccccc
Confidence            777766653

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.027  Score=48.72  Aligned_cols=99  Identities=14%  Similarity=0.179  Sum_probs=61.9

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh----CC-----------CcEE--E
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LG-----------ADEV--F  242 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~g-----------a~~v--i  242 (378)
                      ...+++||++||=.|+  +.|.++..+|++.|.  +|+.+.    .+++..+.+++    ++           .+.+  .
T Consensus        92 ~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E----~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~  165 (324)
T d2b25a1          92 SMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFE----VRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  165 (324)
T ss_dssp             HHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEE----SSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEec----CCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEE
Confidence            3489999999998886  569999999999875  677776    46666655542    11           1111  1


Q ss_pred             ccCcc-cHHHHHHHhcCCCCCcEEEeCCCC--ccHHHHHHhcccCCEEEEEe
Q 017064          243 TESQL-EVKNVKGLLANLPEPALGFNCVGG--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       243 ~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+-. ....+   ..+  .+|.||--...  ..+.++.+.|+|||+++.+.
T Consensus       166 ~~di~~~~~~~---~~~--~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         166 HKDISGATEDI---KSL--TFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             ESCTTCCC------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             ecchhhccccc---CCC--CcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11110 00111   111  38888754444  35689999999999998775

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.83  E-value=0.16  Score=38.27  Aligned_cols=98  Identities=16%  Similarity=0.043  Sum_probs=61.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      -++++|.|. |.+|...++.++..|.+++++...++...++.+.++..|...+ ..+..+.+.+++..-.  .+|.++-+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~~d~~~L~~a~i~--~a~~vi~~   78 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSNDSSVLKKAGID--RCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTSHHHHHHHTTT--TCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEE-EccCcchHHHHHhccc--cCCEEEEc
Confidence            368999999 9999999999999999998887431111123334444565544 4444454445444322  48999999


Q ss_pred             CCCccH----HHHHHhcccCCEEEEE
Q 017064          269 VGGNSA----SKVLKFLSQGGTMVTY  290 (378)
Q Consensus       269 ~g~~~~----~~~~~~l~~~G~~v~~  290 (378)
                      ++.+..    ....+.+.+.-+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCCCceEEE
Confidence            887654    2334455566666544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.79  E-value=0.13  Score=39.62  Aligned_cols=89  Identities=19%  Similarity=0.166  Sum_probs=57.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCC-cEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      ++|+|.|+ |.+|...+..++..|.  +|++..    .+++..+.+++.|. +.........       ...  ..|+||
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D----~~~~~~~~a~~~~~~~~~~~~~~~~-------~~~--~~dlIi   67 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYD----INPESISKAVDLGIIDEGTTSIAKV-------EDF--SPDFVM   67 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEEC----SCHHHHHHHHHTTSCSEEESCGGGG-------GGT--CCSEEE
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEE----CChHHHHHHHHhhcchhhhhhhhhh-------hcc--cccccc
Confidence            36999998 9999999988888885  566655    47888888888775 3333222111       001  277777


Q ss_pred             eCCCCccH----HHHHHhcccCCEEEEEec
Q 017064          267 NCVGGNSA----SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       267 d~~g~~~~----~~~~~~l~~~G~~v~~g~  292 (378)
                      -|+.....    ......+.++..++.++.
T Consensus        68 la~p~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          68 LSSPVRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             ECSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             ccCCchhhhhhhhhhhcccccccccccccc
Confidence            77775433    334455666666666553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.73  E-value=0.027  Score=47.21  Aligned_cols=61  Identities=18%  Similarity=0.279  Sum_probs=42.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+||+|-+|...+..++..|.+|+++.+.+                  +|.  .+...+.+...+.. +|+||++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~--~d~~~~~~~l~~~~-~d~vih~a~   61 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDI--TNVLAVNKFFNEKK-PNVVINCAA   61 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCT--TCHHHHHHHHHHHC-CSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccC--CCHHHHHHHHHHcC-CCEEEeecc
Confidence            489999999999999999999999998887421                  011  12233444433323 899999887


Q ss_pred             Cc
Q 017064          271 GN  272 (378)
Q Consensus       271 ~~  272 (378)
                      ..
T Consensus        62 ~~   63 (281)
T d1vl0a_          62 HT   63 (281)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.68  E-value=0.18  Score=38.94  Aligned_cols=97  Identities=16%  Similarity=0.248  Sum_probs=63.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----------HHHHHHhcCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----------KNVKGLLANL  259 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----------~~i~~~~~~~  259 (378)
                      +|.|.|- |-+|....+++...+ .+++++.+..  .......+...+.+......+...          .....+..  
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~--   77 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTR--PDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD--   77 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESS--CSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCC--cHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhc--
Confidence            6889997 999999999887554 6788777653  334445566667665443222110          02233333  


Q ss_pred             CCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064          260 PEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       260 g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~  293 (378)
                       ++|+|+||+|.-.. ..+-.++..|-++|..+..
T Consensus        78 -~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          78 -EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             -TCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             -CCCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence             39999999998544 5566788888888876533

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.67  E-value=0.0096  Score=51.63  Aligned_cols=99  Identities=17%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCc---EEEccCcccHHHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGL  255 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~---~vi~~~~~~~~~i~~~  255 (378)
                      +.+...+.+|++||-.|+ | .|.+++.+|+ .|++ |+++. .........+..+..+..   .++..+..+      +
T Consensus        25 i~~~~~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd-~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~------~   94 (316)
T d1oria_          25 MFHNRHLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIE-CSSISDYAVKIVKANKLDHVVTIIKGKVEE------V   94 (316)
T ss_dssp             HHTCHHHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEE-CSTTHHHHHHHHHHTTCTTTEEEEESCTTT------C
T ss_pred             HHhccccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEc-CcHHHhhhhhHHHHhCCccccceEeccHHH------c
Confidence            433344678999999998 3 4777776666 5764 66554 322222333344444432   222222211      1


Q ss_pred             hcCCCCCcEEEeCCCC------ccH----HHHHHhcccCCEEE
Q 017064          256 LANLPEPALGFNCVGG------NSA----SKVLKFLSQGGTMV  288 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~------~~~----~~~~~~l~~~G~~v  288 (378)
                      ......+|+|+.....      ..+    ...-+.|+|+|+++
T Consensus        95 ~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          95 ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            1111249999753322      122    33457999999875

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.59  E-value=0.034  Score=48.88  Aligned_cols=79  Identities=9%  Similarity=0.165  Sum_probs=46.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC---CcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---a~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|||+||+|-+|...+..+...|.++++.+|...... ..+.+..+.   .-..+..+-.+...+.++..+. ++|+||.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~Vih   79 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-NLESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDAVMH   79 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-cHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-CCCEEEE
Confidence            5999999999999999988888998777665421111 111122211   1112222223344455544333 3999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        80 lAa~   83 (361)
T d1kewa_          80 LAAE   83 (361)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9874

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.044  Score=42.38  Aligned_cols=97  Identities=13%  Similarity=0.171  Sum_probs=69.8

Q ss_pred             hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~  246 (378)
                      +.+||++...+..|.+..---.|++|+|.|.+..+|.-...++...|++|+.+-..   +.                   
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~---t~-------------------   74 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---TA-------------------   74 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---CS-------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecc---cc-------------------
Confidence            55677777777777664444579999999999999999999999999999876521   10                   


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                          .+.+.+.   ..|+++-++|.+.+-. -++++++-.++.+|..
T Consensus        75 ----~l~~~~~---~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          75 ----HLDEEVN---KGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ----SHHHHHT---TCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             ----cHHHHHh---hccchhhccccccccc-cccccCCCeEeccCcc
Confidence                1122222   3899999999765511 3588888888888843

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.50  E-value=0.066  Score=42.00  Aligned_cols=82  Identities=13%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .|++|.|+|. |.+|...+++++.+|++|++..+...          + +.....       ..+.++...   .|+|+.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~----------~-~~~~~~-------~~l~ell~~---sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK----------E-GPWRFT-------NSLEEALRE---ARAAVC   98 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC----------C-SSSCCB-------SCSHHHHTT---CSEEEE
T ss_pred             cCceEEEecc-ccccccceeeeecccccccccccccc----------c-cceeee-------echhhhhhc---cchhhc
Confidence            4789999999 99999999999999999998864311          0 111111       123344443   899998


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      ++.- +.    + ...++.|+++..+|.++
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccccceeeeccccceEEecc
Confidence            7753 21    1 68899999999999876

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.34  Score=41.57  Aligned_cols=102  Identities=19%  Similarity=0.189  Sum_probs=62.1

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh-----------CC----CcEEEc
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG-----------LG----ADEVFT  243 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-----------~g----a~~vi~  243 (378)
                      +.+..+++++++||=.|+  |.|..+.++|+..++ +++++.    -+++..+.+++           +|    .-.++.
T Consensus       143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid----~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~  216 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVE----KADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  216 (328)
T ss_dssp             HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEE----CSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEe----CCHHHHHHHHHHHHHHHHHhhhccccCCceEEEE
Confidence            335588999999999986  789999999999888 476665    35555444421           12    122333


Q ss_pred             cCcccHHHHHHHhcCCCCCcEEEeCCC-C-c----cHHHHHHhcccCCEEEEEe
Q 017064          244 ESQLEVKNVKGLLANLPEPALGFNCVG-G-N----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       244 ~~~~~~~~i~~~~~~~g~~Dvvid~~g-~-~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+-... ........   +|+|+-..- . +    .+...++.|+|||++|..-
T Consensus       217 gd~~~~-~~~~~~~~---advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         217 GDFLSE-EWRERIAN---TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CCTTSH-HHHHHHHH---CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             Cccccc-ccccccCc---ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            322221 12222222   788874322 1 1    2356788899999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.33  E-value=0.026  Score=49.49  Aligned_cols=76  Identities=16%  Similarity=0.105  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+-+|||+||+|-+|...+..+...|.+|+++.+.....     .............+-.+.+.+.+...+   +|.|+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~Vih   85 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTEG---VDHVFN   85 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHTT---CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-----hhhhcccCcEEEeechhHHHHHHHhhc---CCeEee
Confidence            456899999999999999999999999999886432111     111122223333333344555555543   999999


Q ss_pred             CCCC
Q 017064          268 CVGG  271 (378)
Q Consensus       268 ~~g~  271 (378)
                      +++.
T Consensus        86 ~a~~   89 (363)
T d2c5aa1          86 LAAD   89 (363)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.023  Score=48.88  Aligned_cols=32  Identities=16%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ++|||+||+|-+|...+..+...|.+|+++.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            58999999999999999888888999999865

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.03  E-value=0.06  Score=43.30  Aligned_cols=99  Identities=14%  Similarity=0.072  Sum_probs=60.3

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHHHhcC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      ..++||++||=.|+  +.|..+..+++..+. +|+++.    -+++..+.+    +..+-...+..+........   ..
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvD----is~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~---~~  122 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVE----YSAKPFEKLLELVRERNNIIPLLFDASKPWKYS---GI  122 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEEC----CCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT---TT
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEe----CCHHHHHHHHHHhhccCCceEEEeeccCccccc---cc
Confidence            57899999999998  456678888887754 666665    466555544    34443333323222211111   11


Q ss_pred             CCCCcEEEeCCCCc-----cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGGN-----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...+|+++......     .+..+.+.|++||.++.+-
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            11377777654432     2367789999999998763

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.94  E-value=0.2  Score=43.12  Aligned_cols=81  Identities=11%  Similarity=0.087  Sum_probs=51.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC------CCCcHHHHHHHHh--CCCcEEEccCcccHHHHHHHhcCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD------RAGSDEAKEKLKG--LGADEVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~------~~~~~~~~~~~~~--~ga~~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      ++|||+||+|-+|...+..+...|.+|+++.+.      .....+.......  ..--.++..+-.+.+.+.+...+.. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS-   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc-
Confidence            689999999999999999998899999988531      1112233333322  1222344444344555666544433 


Q ss_pred             CcEEEeCCCC
Q 017064          262 PALGFNCVGG  271 (378)
Q Consensus       262 ~Dvvid~~g~  271 (378)
                      +|+++.+++.
T Consensus        82 ~~~i~h~Aa~   91 (346)
T d1ek6a_          82 FMAVIHFAGL   91 (346)
T ss_dssp             EEEEEECCSC
T ss_pred             cccccccccc
Confidence            7888888774

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.94  E-value=0.14  Score=39.82  Aligned_cols=96  Identities=9%  Similarity=0.170  Sum_probs=59.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cH--------HHHHHHhcCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EV--------KNVKGLLANLP  260 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~--------~~i~~~~~~~g  260 (378)
                      +|.|.|- |-+|....+.+... ..+++++.+..  .......+...+.......+.. ..        ..+.....   
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~---   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTS--PNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK---   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSS--CSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH---
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCC--CcHHHHHhcccCcceeccCccceeccccceecCCchhhhhh---
Confidence            5789997 99999999998865 56888887653  3344444444444433222211 00        01222222   


Q ss_pred             CCcEEEeCCCCccH-HHHHHhcccCCEEEEEec
Q 017064          261 EPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       261 ~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~  292 (378)
                      ++|+||||+|.... +.+-.+++.|-+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            29999999997543 556677777767776653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.89  E-value=0.033  Score=45.75  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ++++||+|+++++|.+.++.+...|++|+++.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~   34 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   34 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999999999999999999998864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.86  E-value=0.088  Score=41.92  Aligned_cols=83  Identities=14%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |.+|.|.|. |.+|...+++++.+|++|++..+......       ....+      -.   .+.++...   .|++.-+
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~------~~---~l~~l~~~---~D~v~~~  104 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD-------HPDFD------YV---SLEDLFKQ---SDVIDLH  104 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC-------CTTCE------EC---CHHHHHHH---CSEEEEC
T ss_pred             ceeeeeeec-ccccccccccccccceeeeccCCccchhh-------hcchh------HH---HHHHHHHh---cccceee
Confidence            689999999 99999999999999999998764211000       00111      11   23333332   7888876


Q ss_pred             CCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +.. +.    + ...++.|+++..+|.++
T Consensus       105 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         105 VPGIEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             ecccccccccccHHHhhccCCceEEEecc
Confidence            653 22    1 67889999999998886

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.84  E-value=0.17  Score=38.06  Aligned_cols=81  Identities=15%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             EEEEeCCCchHHHHHHH-HHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQ-IARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~-la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.+.|+ |.+|.+.++ ++++-+.++++..+    ++++.+.+. ++|.... +..+.    +    .   ..|+||-|
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r----~~~~~~~l~~~~~~~~~-~~~~~----v----~---~~Div~la   64 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANR----GAEKRERLEKELGVETS-ATLPE----L----H---SDDVLILA   64 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECS----SHHHHHHHHHHTCCEEE-SSCCC----C----C---TTSEEEEC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeC----ChhHHHHhhhhcccccc-ccccc----c----c---ccceEEEe
Confidence            5788999 999998777 44543467776653    566666654 5675432 22211    1    1   37888888


Q ss_pred             CCCccHHHHHHhcccCCEEE
Q 017064          269 VGGNSASKVLKFLSQGGTMV  288 (378)
Q Consensus       269 ~g~~~~~~~~~~l~~~G~~v  288 (378)
                      +-...+...++-+++.++++
T Consensus        65 vkP~~~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          65 VKPQDMEAACKNIRTNGALV   84 (152)
T ss_dssp             SCHHHHHHHHTTCCCTTCEE
T ss_pred             cCHHHHHHhHHHHhhcccEE
Confidence            87666677777777666654

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.74  Score=39.80  Aligned_cols=107  Identities=21%  Similarity=0.271  Sum_probs=74.5

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc--------------
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--------------  247 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~--------------  247 (378)
                      +.+.+++++.|+... +|..|.+.+..|+.+|.+.++++... .+++|.+.++.+|++-+......              
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~-~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEK-MSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSC-CCHHHHHHHHHTTCEEEECCC-------CCHHHHHHH
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeecc-chHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHH
Confidence            335667777655554 49999999999999999998887544 68889999999999866521100              


Q ss_pred             ------------------c--------HHHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEec
Q 017064          248 ------------------E--------VKNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       248 ------------------~--------~~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g~  292 (378)
                                        +        ..++.+-+++  .+|.++-++|+--.    ...+....+.-+++.+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~--~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDG--KLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTT--CCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCC--CCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                              0        0123333333  49999999997432    456667778888887763

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.82  E-value=0.051  Score=43.05  Aligned_cols=87  Identities=17%  Similarity=0.119  Sum_probs=57.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      |.++.|.|. |.+|...+++++.+|+++++..+... .. .. .... +...   .     ..+.++...   .|+|+.+
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~-~~-~~-~~~~-~~~~---~-----~~l~~ll~~---sD~v~l~  110 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA-SS-SD-EASY-QATF---H-----DSLDSLLSV---SQFFSLN  110 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC-CH-HH-HHHH-TCEE---C-----SSHHHHHHH---CSEEEEC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhcccccccccccc-cc-ch-hhcc-cccc---c-----CCHHHHHhh---CCeEEec
Confidence            789999999 99999999999999999998764321 11 11 1111 1111   0     123333332   7888876


Q ss_pred             CCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          269 VGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +.- +.    + ...++.|+++..+|.++
T Consensus       111 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         111 APSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCCCchHhheecHHHhhCcCCccEEEecC
Confidence            653 21    2 67889999999888876

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.69  E-value=0.099  Score=45.15  Aligned_cols=33  Identities=24%  Similarity=0.117  Sum_probs=28.0

Q ss_pred             CCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEec
Q 017064          189 GDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       189 g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ++..||+|+  +.++|.+.++.+...|++|+++.+
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~   36 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            467899995  459999999999999999998774

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.63  E-value=0.043  Score=44.27  Aligned_cols=93  Identities=12%  Similarity=0.095  Sum_probs=57.8

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc-EEEccCcccHHHHHHHhcCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~-~vi~~~~~~~~~i~~~~~~~  259 (378)
                      .++++++||=+||  |.|..+..+++. |++++++.    -+++..+.++    ..+.. ..+..+..   .   +.-..
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~~-~~~v~giD----~S~~~i~~ak~~~~~~~~~~~~~~~d~~---~---l~~~~  100 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLEDY-GFEVVGVD----ISEDMIRKAREYAKSRESNVEFIVGDAR---K---LSFED  100 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTCCCEEEECCTT---S---CCSCT
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhhh-hccccccc----ccccchhhhhhhhccccccccccccccc---c---ccccC
Confidence            4688899999998  457788888874 88988876    4666555554    34422 12222211   1   11111


Q ss_pred             CCCcEEEeCCCCc---------cHHHHHHhcccCCEEEEE
Q 017064          260 PEPALGFNCVGGN---------SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       260 g~~Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~  290 (378)
                      +.+|+|+....-.         .+..+.+.|+|||+++..
T Consensus       101 ~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         101 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            2599998654421         135678999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.16  Score=39.55  Aligned_cols=36  Identities=17%  Similarity=0.076  Sum_probs=31.5

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ...+++|+|.|+ |+.|+.|+..+..+|.+|++.-+.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEecc
Confidence            345689999999 999999999999999999888753

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.47  E-value=0.13  Score=44.23  Aligned_cols=100  Identities=19%  Similarity=0.134  Sum_probs=57.8

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccH-HHHHHHhcC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEV-KNVKGLLAN  258 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~-~~i~~~~~~  258 (378)
                      .+++|++||=.++  +.|..++.+|+. |+ +|+.+.    .+++..+.++    ..|...-+.....++ +.+..+...
T Consensus       142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD----~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~  214 (324)
T d2as0a2         142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGID----KSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK  214 (324)
T ss_dssp             GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT
T ss_pred             hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeec----CCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhc
Confidence            3678999988775  556666666655 66 566655    4677666654    466531111111222 222222222


Q ss_pred             CCCCcEEEeCCCC---c-------------cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGG---N-------------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~---~-------------~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...||+|+-....   .             .+..++++|+|||.++++.
T Consensus       215 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             cCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            2259999853321   1             1255778999999999886

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.43  E-value=0.14  Score=37.87  Aligned_cols=76  Identities=13%  Similarity=0.150  Sum_probs=48.7

Q ss_pred             EEEEeCCCchHHHHHHHHHH-HcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|.|.|++|-+|+..++... ..+.++++..+...    ......                      ..  ++|++||++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~----~~~~~~----------------------~~--~~DvvIDFS   52 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD----PLSLLT----------------------DG--NTEVVIDFT   52 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC----CTHHHH----------------------TT--TCSEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC----chhhhc----------------------cc--cCCEEEEcc
Confidence            58999999999999888765 45778887774311    001111                      11  378888888


Q ss_pred             CCccHHHHHHhcccCCEEEEEecCC
Q 017064          270 GGNSASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       270 g~~~~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      -.+.....++.....|.=+.+|.+.
T Consensus        53 ~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          53 HPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             CTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             cHHHHHHHHHHHHhcCCCEEEeccc
Confidence            7777766665555555555566443

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.36  E-value=0.016  Score=45.15  Aligned_cols=97  Identities=9%  Similarity=0.127  Sum_probs=61.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc------CcccHHHHHHHhcCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE------SQLEVKNVKGLLANLP  260 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~------~~~~~~~i~~~~~~~g  260 (378)
                      -.|++|+|.|.+.-+|.=...++...|++|+..-..   +...    ...+++..+..      .....+.++.....  
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~--   97 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN---NIQK----FTRGESLKLNKHHVEDLGEYSEDLLKKCSLD--   97 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS---EEEE----EESCCCSSCCCCEEEEEEECCHHHHHHHHHH--
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc---cccc----cccccceeeeeeccccccccchhHHhhcccc--
Confidence            458999999998889998888888899998754311   1100    01122111111      11112334544443  


Q ss_pred             CCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064          261 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM  293 (378)
Q Consensus       261 ~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~  293 (378)
                       .|++|.++|.+.+.---+++++|..++.+|..
T Consensus        98 -aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          98 -SDVVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             -CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             -CCEEEEccCCCccccChhhcccCceEeecccc
Confidence             99999999987653334688899999998843

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.34  E-value=0.22  Score=34.28  Aligned_cols=73  Identities=11%  Similarity=0.026  Sum_probs=51.1

Q ss_pred             ccCCCCEEEEeCCCchHHHHH-HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCc
Q 017064          185 TLNSGDSIVQNGATSIVGQCI-IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~a-v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      .+...+++-+.|. |+.|..+ +++++..|..|.+....   .....+.+++.|......++...   +    .   +.|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~---~~~~~~~L~~~Gi~v~~g~~~~~---i----~---~~d   69 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIA---DGVVTQRLAQAGAKIYIGHAEEH---I----E---GAS   69 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESC---CSHHHHHHHHTTCEEEESCCGGG---G----T---TCS
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCC---CChhhhHHHHCCCeEEECCcccc---C----C---CCC
Confidence            3456789999999 8889777 79999999999988653   23444566778987555444322   1    1   388


Q ss_pred             EEEeCCCC
Q 017064          264 LGFNCVGG  271 (378)
Q Consensus       264 vvid~~g~  271 (378)
                      +|+-+.+-
T Consensus        70 ~vV~S~AI   77 (96)
T d1p3da1          70 VVVVSSAI   77 (96)
T ss_dssp             EEEECTTS
T ss_pred             EEEECCCc
Confidence            88876664

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.31  E-value=0.026  Score=49.03  Aligned_cols=100  Identities=16%  Similarity=0.138  Sum_probs=50.5

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc---EEEccCcccHHHHHHHh
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGLL  256 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~---~vi~~~~~~~~~i~~~~  256 (378)
                      +.+...+.+|++||-.|+  |.|.++..+|+ .|++.+..++.........+..+..|..   .++..+..+   +.  .
T Consensus        30 I~~~~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~---l~--~  101 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLED---VH--L  101 (328)
T ss_dssp             HHHHHHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT---SC--C
T ss_pred             HHhccccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhh---cc--C
Confidence            333345678999999998  34666665555 5775444444321111222333444432   222222111   10  1


Q ss_pred             cCCCCCcEEEeCCCC------ccH----HHHHHhcccCCEEE
Q 017064          257 ANLPEPALGFNCVGG------NSA----SKVLKFLSQGGTMV  288 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~------~~~----~~~~~~l~~~G~~v  288 (378)
                      .. .++|+|+...-.      ...    ...-+.|+|||.++
T Consensus       102 ~~-~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         102 PF-PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SS-SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cc-cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            11 249998753321      122    23347899999874

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.30  E-value=0.082  Score=41.69  Aligned_cols=88  Identities=14%  Similarity=0.058  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|.|.|. |.+|...+++++.+|++|+...+..  ..+..  .+..+....        ..+.++...   .|+|+-
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~--~~~~~--~~~~~~~~~--------~~l~~~l~~---sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR--LPESV--EKELNLTWH--------ATREDMYPV---CDVVTL  106 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC--CCHHH--HHHHTCEEC--------SSHHHHGGG---CSEEEE
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecc--ccccc--ccccccccc--------CCHHHHHHh---ccchhh
Confidence            4789999999 9999999999999999999887532  12221  122222111        123334433   888877


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +..- +.    + .+.++.|+++..+|.++
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            6653 21    1 67888998888888775

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.29  E-value=0.12  Score=39.36  Aligned_cols=85  Identities=12%  Similarity=0.148  Sum_probs=56.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|.|.|. |.+|...+.-+...|.+|++..    .++++.+.+.+.|+... +.    .+++.+      ..|++|-|+.
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d----~~~~~~~~~~~~~~~~~-~~----~~e~~~------~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSD----RNPEAIADVIAAGAETA-ST----AKAIAE------QCDVIITMLP   65 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEEC-SS----HHHHHH------HCSEEEECCS
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEe----CCcchhHHHHHhhhhhc-cc----HHHHHh------CCCeEEEEcC
Confidence            4788999 9999988887777899998876    37788888888776432 11    112211      2788888886


Q ss_pred             CccH-HH-------HHHhcccCCEEEEEe
Q 017064          271 GNSA-SK-------VLKFLSQGGTMVTYG  291 (378)
Q Consensus       271 ~~~~-~~-------~~~~l~~~G~~v~~g  291 (378)
                      .+.. ..       ....++++-.++.++
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~s   94 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMS   94 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECC
Confidence            5432 22       345566666666665

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.20  E-value=0.098  Score=42.33  Aligned_cols=106  Identities=11%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHH----HHHHhCCCcEEEccCcccH-HHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAK----EKLKGLGADEVFTESQLEV-KNV  252 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~----~~~~~~ga~~vi~~~~~~~-~~i  252 (378)
                      |..+.+....++||=.|.  ..|+.++.+|+++  +.+++.+..    +++..    +.++..|....+.....+. +.+
T Consensus        51 L~~L~~~~~~k~vLEiGt--~~GyStl~~a~al~~~g~i~tie~----~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l  124 (219)
T d2avda1          51 LANLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEV----DAQPPELGRPLWRQAEAEHKIDLRLKPALETL  124 (219)
T ss_dssp             HHHHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEES----CSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred             HHHHHHccCCCeEEEEec--hhhHHHHHHHHhCCCCceEEEEee----chhHHHHHHHHHHhcCccceEEEEEeehhhcc
Confidence            334455667789999985  7888999999876  457766653    44443    3444566543333222222 223


Q ss_pred             HHHh--cCCCCCcEEEeCCCCcc----HHHHHHhcccCCEEEEEe
Q 017064          253 KGLL--ANLPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       253 ~~~~--~~~g~~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~g  291 (378)
                      ..+.  +..+.||.||--.....    +..+++.|++||-++.=.
T Consensus       125 ~~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         125 DELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             HHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hhhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence            3322  11235999986555432    468899999999987643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.08  E-value=0.081  Score=42.30  Aligned_cols=69  Identities=14%  Similarity=0.233  Sum_probs=42.1

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      ++|||+||+|-+|...+..+...|.  +|++..|.....           ... +.....+..++.....+  .+|.||.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------~~~-~~~~~~d~~~~~~~~~~--~~d~vi~   68 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPR-LDNPVGPLAELLPQLDG--SIDTAFC   68 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTT-EECCBSCHHHHGGGCCS--CCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------ccc-ccccccchhhhhhcccc--chheeee
Confidence            7999999999999999988887776  555555321100           000 11111222333333222  4899999


Q ss_pred             CCCCc
Q 017064          268 CVGGN  272 (378)
Q Consensus       268 ~~g~~  272 (378)
                      |+|..
T Consensus        69 ~~g~~   73 (212)
T d2a35a1          69 CLGTT   73 (212)
T ss_dssp             CCCCC
T ss_pred             eeeee
Confidence            99864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.98  E-value=0.16  Score=39.33  Aligned_cols=94  Identities=16%  Similarity=0.179  Sum_probs=56.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      .+|-|.|. |.+|...+.-+...|.+|++..+    ++++.+.+.+.++...........+++......   .|.++-++
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~---~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNR----TVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKK---PRRIILLV   74 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECS----STHHHHHHHHTTTTTSSCEECSSHHHHHHHBCS---SCEEEECS
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcC----CHHHHHHHHHhccccccccchhhhhhhhhhhcc---cceEEEec
Confidence            46889999 99999888888778999998874    667777666554421000001122333333332   66666666


Q ss_pred             CCcc-----HHHHHHhcccCCEEEEEe
Q 017064          270 GGNS-----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       270 g~~~-----~~~~~~~l~~~G~~v~~g  291 (378)
                      ....     .+.....++++-.++.++
T Consensus        75 ~~~~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          75 KAGQAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             CTTHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             CchHHHHHHHHHHHhccccCcEEEecC
Confidence            5432     134555666666666654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.95  E-value=0.13  Score=43.49  Aligned_cols=101  Identities=9%  Similarity=0.057  Sum_probs=58.8

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEcc---CcccHHHHHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTE---SQLEVKNVKG  254 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~---~~~~~~~i~~  254 (378)
                      ...+.+++++||=+|+  |.|..++.+|+. |++|+++.    -+++-.+.+++    .+.......   .+.+......
T Consensus        50 ~~l~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD----~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVD----ASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK  122 (292)
T ss_dssp             HHHHHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred             HHhhhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeecc----CchHHHHHHHHHHHhcccccccceeeeeecccccccc
Confidence            3344567789999987  667788888876 89988876    46665555532    222111000   0011111111


Q ss_pred             HhcCCCCCcEEEeCCCC---------------ccHHHHHHhcccCCEEEE
Q 017064          255 LLANLPEPALGFNCVGG---------------NSASKVLKFLSQGGTMVT  289 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~---------------~~~~~~~~~l~~~G~~v~  289 (378)
                      .......+|.|+.....               ..++.+.+.|+|||.++.
T Consensus       123 ~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         123 DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             HSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             ccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            11111249999864321               135788899999999886

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.84  E-value=0.17  Score=38.15  Aligned_cols=85  Identities=15%  Similarity=0.088  Sum_probs=59.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|.+.|+ |.+|.+.+.-....|.++++..+    +.++.+.+ +++|....-     +.+++   ..   ..|+||-|+
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r----~~~~~~~l~~~~g~~~~~-----~~~~~---~~---~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGS----SLERSKEIAEQLALPYAM-----SHQDL---ID---QVDLVILGI   65 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECS----SHHHHHHHHHHHTCCBCS-----SHHHH---HH---TCSEEEECS
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcC----hHHhHHhhccccceeeec-----hhhhh---hh---ccceeeeec
Confidence            4788998 99999888766667888887764    45555544 567754321     11222   22   389999999


Q ss_pred             CCccHHHHHHhcccCCEEEEEe
Q 017064          270 GGNSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       270 g~~~~~~~~~~l~~~G~~v~~g  291 (378)
                      -...+...+..++++..++.+.
T Consensus        66 kp~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          66 KPQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             CGGGHHHHHTTSCCCSCEEECC
T ss_pred             chHhHHHHhhhcccceeEeccc
Confidence            8777888888888877776553

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.76  E-value=1.4  Score=33.78  Aligned_cols=134  Identities=13%  Similarity=0.047  Sum_probs=75.7

Q ss_pred             EEEEeCCCchHHHH-HHHHHHHcC--CcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          191 SIVQNGATSIVGQC-IIQIARHRG--IHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       191 ~VlV~g~~g~~G~~-av~la~~~g--~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +|.|.|+ |.+|.- .+...+..+  .+++++++.   ++++.+ +.+.++...+++.       ..++.... .+|+|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~---~~~~~~~~~~~~~~~~~~~~-------~~ell~~~-~id~v~   72 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSR---TRSHAEEFAKMVGNPAVFDS-------YEELLESG-LVDAVD   72 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECS---SHHHHHHHHHHHSSCEEESC-------HHHHHHSS-CCSEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEec---cHhhhhhhhccccccceeee-------eecccccc-ccceee
Confidence            5789998 889864 466666543  477878764   444444 4456776655421       22223232 499999


Q ss_pred             eCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccc------hhhhh-cCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          267 NCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVST------SAFIF-KDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       267 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      -|+.... ...+..++..| .=|++..    |...+.      ..... ++..+.-.+...+      ..+...+.++.+
T Consensus        73 I~tp~~~h~~~~~~al~~g-k~V~~EK----Pl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~------~~~~~~~~~~~~  141 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRKG-VHVICEK----PISTDVETGKKVVELSEKSEKTVYIAENFRE------NSYQKEFEDFYQ  141 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEES----SSSSSHHHHHHHHHHHHHCSSCEEEECGGGC------CHHHHHHHHHHH
T ss_pred             ccccccccccccccccccc-hhhhcCC----CCcCCHHHHHHHHHHHHHhCCeEEEEeeccc------cccCHHHHHHHH
Confidence            8887654 46666777765 4466653    322222      12222 2333322111111      124456778889


Q ss_pred             HHHcCCccc
Q 017064          339 LAREGKLKY  347 (378)
Q Consensus       339 ~l~~g~~~~  347 (378)
                      ++++|++-.
T Consensus       142 ~i~~G~ig~  150 (181)
T d1zh8a1         142 VVAEGKPND  150 (181)
T ss_dssp             HHHSCCCCS
T ss_pred             HHHCCCCcc
Confidence            999987653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.2  Score=41.09  Aligned_cols=81  Identities=16%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc--------------------HHHHHHHHhCCCcEEEc-cCc-c
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--------------------DEAKEKLKGLGADEVFT-ESQ-L  247 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~--------------------~~~~~~~~~~ga~~vi~-~~~-~  247 (378)
                      .+|+|.|+ |++|..++..+...|...+.++|.+.-.                    +...+.++++..+.-+. ... .
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~  109 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  109 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence            79999999 9999999999999999888888653311                    11123334433332222 221 1


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGGNSA  274 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~  274 (378)
                      ...........   +|+++|+..+...
T Consensus       110 ~~~~~~~~~~~---~divid~~d~~~~  133 (247)
T d1jw9b_         110 DDAELAALIAE---HDLVLDCTDNVAV  133 (247)
T ss_dssp             CHHHHHHHHHT---SSEEEECCSSHHH
T ss_pred             hhccccccccc---cceeeeccchhhh
Confidence            22334444443   9999999987554

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.66  E-value=0.13  Score=42.02  Aligned_cols=96  Identities=15%  Similarity=0.093  Sum_probs=59.2

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc-EEEccCcccHHHHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKG  254 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~-~vi~~~~~~~~~i~~  254 (378)
                      +.......++++||=.|+  |.|..+..+++ .|++|+++.    -+++-.+.++    ..+.. .++..+-      ..
T Consensus        33 ~~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD----~s~~mi~~a~~~~~~~~~~i~~~~~d~------~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLD----LHEEMLRVARRKAKERNLKIEFLQGDV------LE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEE----SCHHHHHHHHHHHHHTTCCCEEEESCG------GG
T ss_pred             HHHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEe----eccccccccccccccccccchheehhh------hh
Confidence            344456677889999998  34788887777 588988876    3555555444    33432 2222221      11


Q ss_pred             HhcCCCCCcEEEeCCCC----------ccHHHHHHhcccCCEEEE
Q 017064          255 LLANLPEPALGFNCVGG----------NSASKVLKFLSQGGTMVT  289 (378)
Q Consensus       255 ~~~~~g~~Dvvid~~g~----------~~~~~~~~~l~~~G~~v~  289 (378)
                      +.-. +.||+|+...+.          ..++.+.++|+|||.++.
T Consensus       100 l~~~-~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         100 IAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccc-cccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            1112 249999875432          123678899999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.56  E-value=0.077  Score=45.84  Aligned_cols=31  Identities=6%  Similarity=0.128  Sum_probs=25.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CcEEEEec
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIR  221 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~  221 (378)
                      +|||+||+|-+|...++.+...| .+|+++..
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~   33 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI   33 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            59999999999999998777777 57887754

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=92.56  E-value=0.39  Score=36.77  Aligned_cols=98  Identities=16%  Similarity=0.167  Sum_probs=62.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-------CcEEE-------ccC------cccHH
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-------ADEVF-------TES------QLEVK  250 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-------a~~vi-------~~~------~~~~~  250 (378)
                      +|.|.|- |-+|.++.+++...+.+++++-+.  .+.+....+.++.       .+.-.       +..      ..+.+
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~--~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDL--TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECS--SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCC--cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            4789998 999999999988889999888876  3566666664322       11111       111      11122


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCC
Q 017064          251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      ++.....   ++|+|+||+|.-. .+.+..++..|-+-|.+..+.
T Consensus        79 ~i~W~~~---gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          79 EIPWAEA---GVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             GCCTGGG---TEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             HCccccc---CCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            2322111   3999999999744 467777888776666666443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.53  E-value=0.21  Score=42.86  Aligned_cols=99  Identities=15%  Similarity=0.114  Sum_probs=56.9

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcE--EEccCcccHHHHHHHhcC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~--vi~~~~~~~~~i~~~~~~  258 (378)
                      ...+|++||=.++  +.|..++++|+ .+++|+++.    .+++..+.++    ..|.+.  ++..+..+  -++.+...
T Consensus       142 ~~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD----~s~~al~~a~~n~~~ngl~~~~~i~~d~~~--~~~~~~~~  212 (318)
T d1wxxa2         142 ERFRGERALDVFS--YAGGFALHLAL-GFREVVAVD----SSAEALRRAEENARLNGLGNVRVLEANAFD--LLRRLEKE  212 (318)
T ss_dssp             GGCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEE----SCHHHHHHHHHHHHHTTCTTEEEEESCHHH--HHHHHHHT
T ss_pred             HHhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeec----chHHHHHHHHHHHHHcCCCCcceeeccHHH--HhhhhHhh
Confidence            3457899987776  33555566664 355777665    4677766664    466542  22222211  22223222


Q ss_pred             CCCCcEEEeCCC-----Cc-----------cHHHHHHhcccCCEEEEEec
Q 017064          259 LPEPALGFNCVG-----GN-----------SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       259 ~g~~Dvvid~~g-----~~-----------~~~~~~~~l~~~G~~v~~g~  292 (378)
                      ...||+|+-...     ..           .+..+++.|+|||.++++..
T Consensus       213 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         213 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            235999984322     11           12467889999999998763

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.34  E-value=0.033  Score=44.36  Aligned_cols=93  Identities=14%  Similarity=0.129  Sum_probs=56.7

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcEE-EccCcccHHHHHHHhcCCC
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-FTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~v-i~~~~~~~~~i~~~~~~~g  260 (378)
                      +.+| +||=+|+  +.|..+..+++ .|++|+++.    -+++..+.+    ...|.+.+ +...+     +...... +
T Consensus        29 ~~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD----~s~~~l~~a~~~~~~~~~~~~~~~~~d-----~~~~~~~-~   94 (198)
T d2i6ga1          29 VAPG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWD----KNPASMANLERIKAAEGLDNLQTDLVD-----LNTLTFD-G   94 (198)
T ss_dssp             SCSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEE----SCHHHHHHHHHHHHHTTCTTEEEEECC-----TTTCCCC-C
T ss_pred             CCCC-cEEEECC--CCCHHHHHHHH-Hhhhhcccc----CcHHHHHHHHHHhhhccccchhhhhee-----ccccccc-c
Confidence            4554 8999998  48888888876 589998876    356555544    34555422 11111     1111111 2


Q ss_pred             CCcEEEeCCCC-----c----cHHHHHHhcccCCEEEEEec
Q 017064          261 EPALGFNCVGG-----N----SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       261 ~~Dvvid~~g~-----~----~~~~~~~~l~~~G~~v~~g~  292 (378)
                      .||+|+....-     +    .+..+.++|+++|.++....
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            49999964432     1    23567789999999887653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.22  E-value=0.24  Score=38.76  Aligned_cols=84  Identities=14%  Similarity=0.120  Sum_probs=57.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      .+.+|+|+|. |.+|...+++++.+|++|++..+.....           .+....     ...+.++...   .|+++-
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-----------~~~~~~-----~~~l~ell~~---sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLP-----------LGNATQ-----VQHLSDLLNM---SDVVSL  102 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCC-----------CTTCEE-----CSCHHHHHHH---CSEEEE
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccch-----------hhhhhh-----hhhHHHHHhh---ccceee
Confidence            4789999999 9999999999999999999887431100           000000     1123333332   889888


Q ss_pred             CCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064          268 CVGG-NS----A-SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~-~~----~-~~~~~~l~~~G~~v~~g  291 (378)
                      +..- +.    + .+.++.|+++..+|.++
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         103 HVPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             CCCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             cccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            7663 21    1 68889999999998876

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=92.10  E-value=0.78  Score=35.00  Aligned_cols=100  Identities=14%  Similarity=0.070  Sum_probs=63.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-------CCcEEE-------ccCc------ccHH
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-------GADEVF-------TESQ------LEVK  250 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~vi-------~~~~------~~~~  250 (378)
                      +|.|.|- |-+|.++...+...+.+++++-+.. .+.+....+.++       ..+-..       +...      .+.+
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~-~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPF-IALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTT-SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCC-cCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            5789998 9999999999988899888887643 345566555432       121111       1111      1122


Q ss_pred             HHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCC
Q 017064          251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       251 ~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      ++.....   ++|+||||+|... ...+..++..|-+-|.+..+..
T Consensus        80 ~i~W~~~---gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          80 NIPWSKA---GAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             GCCHHHH---TCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             HCCcccc---CCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence            2222111   3999999999744 4677888988877777775544

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.99  E-value=0.091  Score=42.89  Aligned_cols=99  Identities=12%  Similarity=-0.005  Sum_probs=59.7

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhcC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      ..++||++||=+||  +.|..+..+|+.. +.+|+++.    -+++..+.+++    .+....+..+.......   ...
T Consensus        70 l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVD----iS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~---~~~  140 (230)
T d1g8sa_          70 MPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIE----YAPRIMRELLDACAERENIIPILGDANKPQEY---ANI  140 (230)
T ss_dssp             CCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEE----SCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG---TTT
T ss_pred             CCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEe----CcHHHHHHHHHHHhhhcccceEEEeeccCccc---ccc
Confidence            56899999999998  5678888888864 34777776    46666555543    23223333222221111   111


Q ss_pred             CCCCcEEEeCCCCc-----cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGGN-----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-----~~~~~~~~l~~~G~~v~~g  291 (378)
                      ...+|+++......     .+..+.+.|++||.++..-
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            11255666555432     1367788999999987653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=1.2  Score=33.41  Aligned_cols=86  Identities=13%  Similarity=-0.014  Sum_probs=54.1

Q ss_pred             EEEEeCCCchHHHH-HHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQC-IIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~-av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.|.|+ |.+|.- .....+. -+.+++++++..  .+......++++... .  +  +.+++   ..   .+|+|+.|
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~--~~~~~~~~~~~~~~~-~--~--~~~~l---~~---~~D~V~I~   68 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICESWRIPY-A--D--SLSSL---AA---SCDAVFVH   68 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHHHHTCCB-C--S--SHHHH---HT---TCSEEEEC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEech--hHhhhhhhhcccccc-c--c--cchhh---hh---hccccccc
Confidence            5789998 888864 5665554 478999888753  233344556677542 1  1  12233   22   39999988


Q ss_pred             CCCcc-HHHHHHhcccCCEEEEEe
Q 017064          269 VGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      +.... ...+..++..|=. |++.
T Consensus        69 tp~~~h~~~~~~al~~gk~-V~~E   91 (164)
T d1tlta1          69 SSTASHFDVVSTLLNAGVH-VCVD   91 (164)
T ss_dssp             SCTTHHHHHHHHHHHTTCE-EEEE
T ss_pred             ccchhccccccccccccce-eecc
Confidence            87654 4666777777655 5665

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.81  E-value=0.26  Score=42.33  Aligned_cols=32  Identities=19%  Similarity=0.356  Sum_probs=29.0

Q ss_pred             EE-EEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          191 SI-VQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       191 ~V-lV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +| ||+||+|-+|...+..+...|.+|+++++.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            57 999999999999999988899999999874

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.68  E-value=0.38  Score=34.32  Aligned_cols=38  Identities=16%  Similarity=0.202  Sum_probs=33.5

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ....++++|+|.|+ |.+|.-.++.++.+|.+|..+.+.
T Consensus        17 l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~   54 (121)
T d1mo9a2          17 LDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRT   54 (121)
T ss_dssp             CCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             HhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeecc
Confidence            55678899999999 999999999999999999988754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.68  E-value=0.31  Score=39.43  Aligned_cols=80  Identities=15%  Similarity=0.118  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      -.|.+|+|.|- |.+|..+++++...|++++++.    .+..+.+.+ ...|+..+ +.++        +..-  ..|+.
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d----~~~~~~~~~~~~~g~~~~-~~~~--------~~~~--~cDIl  100 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTD----VNKAAVSAAVAEEGADAV-APNA--------IYGV--TCDIF  100 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHCCEEC-CGGG--------TTTC--CCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeec----ccHHHHHHHHHhcCCccc-CCcc--------cccc--cccEe
Confidence            35789999999 9999999999999999999776    345555444 34665432 2211        1111  38888


Q ss_pred             EeCCCCccH-HHHHHhcc
Q 017064          266 FNCVGGNSA-SKVLKFLS  282 (378)
Q Consensus       266 id~~g~~~~-~~~~~~l~  282 (378)
                      +=|+.+..+ ......++
T Consensus       101 ~PcA~~~~I~~~~~~~l~  118 (230)
T d1leha1         101 APCALGAVLNDFTIPQLK  118 (230)
T ss_dssp             EECSCSCCBSTTHHHHCC
T ss_pred             cccccccccChHHhhccC
Confidence            888876554 33344443

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.68  E-value=0.74  Score=38.50  Aligned_cols=104  Identities=15%  Similarity=0.235  Sum_probs=72.2

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----------------
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----------------  247 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----------------  247 (378)
                      +.+.++.+|+... +|..|++++..|+.+|.+.++++... .++.|.+.++.+|++-++...+.                
T Consensus        55 g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~-~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          55 GEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDN-MSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESC-CCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccC-chhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            5566666655555 49999999999999999999888654 57888899999999865422110                


Q ss_pred             ------------cH--------HHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEe
Q 017064          248 ------------EV--------KNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       248 ------------~~--------~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                                  ..        .++.+..++  .+|.++-++|+.-.    ...++...+..+++-+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~--~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGG--RITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTT--CCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCC--CCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                        00        122222333  48999999886432    45667778888887776

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.65  E-value=0.066  Score=35.45  Aligned_cols=31  Identities=16%  Similarity=0.169  Sum_probs=28.5

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ++|.|.|+ |.+|.+.++-|+.+|.++++...
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp   32 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGL   32 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECT
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcC
Confidence            47999999 99999999999999999998874

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.61  E-value=0.57  Score=40.79  Aligned_cols=81  Identities=7%  Similarity=0.060  Sum_probs=46.6

Q ss_pred             EEEEeCCCchHHHHHHH-HHHHcCCcEEEEecCC---------CCcHHHHHHHHhCC---------CcEEEccCcccHHH
Q 017064          191 SIVQNGATSIVGQCIIQ-IARHRGIHSINIIRDR---------AGSDEAKEKLKGLG---------ADEVFTESQLEVKN  251 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~-la~~~g~~vi~~~~~~---------~~~~~~~~~~~~~g---------a~~vi~~~~~~~~~  251 (378)
                      +|||+||+|-+|...+. |++..|.+|+++....         ...+.....+....         ...++..+-.+.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            69999999999977775 5567799998874210         01122222222111         12233333334445


Q ss_pred             HHHHhcCCCCCcEEEeCCCC
Q 017064          252 VKGLLANLPEPALGFNCVGG  271 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~  271 (378)
                      +.+.....+++|+||.+++.
T Consensus        84 l~~~~~~~~~~d~ViH~Aa~  103 (383)
T d1gy8a_          84 LNGVFTRHGPIDAVVHMCAF  103 (383)
T ss_dssp             HHHHHHHSCCCCEEEECCCC
T ss_pred             hhhhhhccceeehhhccccc
Confidence            55554433348999999974

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.59  E-value=0.11  Score=42.77  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.|||+|+++++|.+.++.+...|++|+++.+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~   34 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            468999999999999999999999999988754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.45  E-value=0.29  Score=37.17  Aligned_cols=46  Identities=17%  Similarity=0.050  Sum_probs=35.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~  240 (378)
                      .+|.+.|. |.+|...+.-+...|.+|.+..    .+.++.+.+...|+..
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d----~~~~~~~~~~~~~~~~   47 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFD----LVQSAVDGLVAAGASA   47 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SSHHHHHHHHHTTCEE
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEE----Cchhhhhhhhhhhccc
Confidence            36889998 9999987777777799998876    3677777777777543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.44  E-value=0.1  Score=43.41  Aligned_cols=94  Identities=13%  Similarity=0.018  Sum_probs=60.1

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---EEEccCcccHHHHHHHhc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~i~~~~~  257 (378)
                      .+++|++||-.+|  ++|..++.+|+.-+++|+++.    .+++..+.++    ..|.+   .++..+..      ....
T Consensus       104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd----~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~------~~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIE----KDPYTFKFLVENIHLNKVEDRMSAYNMDNR------DFPG  171 (260)
T ss_dssp             HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEEC----CCHHHHHHHHHHHHHTTCTTTEEEECSCTT------TCCC
T ss_pred             hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEec----CCHHHHHHHHHHHHHhCCCceEEEEEcchH------Hhcc
Confidence            4689999999886  677888888887556877776    4677766664    34542   33333321      1122


Q ss_pred             CCCCCcEEE-eCCCC--ccHHHHHHhcccCCEEEEEe
Q 017064          258 NLPEPALGF-NCVGG--NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       258 ~~g~~Dvvi-d~~g~--~~~~~~~~~l~~~G~~v~~g  291 (378)
                      . +.+|.|+ +....  ..+..+++.+++||.+....
T Consensus       172 ~-~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         172 E-NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             C-SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C-CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            2 3488665 33322  34578999999999876543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.13  E-value=0.4  Score=34.18  Aligned_cols=37  Identities=19%  Similarity=0.308  Sum_probs=32.3

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++..++|+|.|+ |.+|.-+++.+..+|.+|..+.+.
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehh
Confidence            4556789999999 999999999999999999988853

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.11  E-value=0.67  Score=35.75  Aligned_cols=88  Identities=10%  Similarity=0.021  Sum_probs=56.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHH-HHHHhCCCc---EEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAK-EKLKGLGAD---EVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~-~~~~~~ga~---~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +|.|.|+ |.+|...++.++.. +++++++++.   ++++. +..+.++..   .++       ....++.... .+|+|
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~~-~iD~v   70 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASR---SLEKAKAFATANNYPESTKIH-------GSYESLLEDP-EIDAL   70 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECS---SHHHHHHHHHHTTCCTTCEEE-------SSHHHHHHCT-TCCEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeC---Cccccccchhccccccceeec-------CcHHHhhhcc-cccee
Confidence            4789998 89999888877765 6788888764   44443 344556642   222       1233333332 49999


Q ss_pred             EeCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          266 FNCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       266 id~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      +-|+.... ++.+..++..|=. |++.
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g~~-v~~E   96 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKGKH-ILLE   96 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTTCE-EEEC
T ss_pred             eecccchhhcchhhhhhhccce-eecc
Confidence            99887644 5677777776644 5565

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=91.04  E-value=0.35  Score=40.11  Aligned_cols=94  Identities=12%  Similarity=0.050  Sum_probs=62.6

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCC-cEEEccCcccHHHHHHHhcCCCCCc
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQLEVKNVKGLLANLPEPA  263 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~i~~~~~~~g~~D  263 (378)
                      ..++.+||=.|+  |.|..+..+++.. +.+++++.    .+++..+.+++... ...+..+...   + . ... +.+|
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD----~s~~~~~~a~~~~~~~~~~~~d~~~---l-~-~~~-~sfD  149 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLD----VSKVAIKAAAKRYPQVTFCVASSHR---L-P-FSD-TSMD  149 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEE----SCHHHHHHHHHHCTTSEEEECCTTS---C-S-BCT-TCEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEec----chHhhhhhhhcccccccceeeehhh---c-c-CCC-CCEE
Confidence            456788998887  5677777788765 56777776    46777777765322 2222222111   1 0 111 2499


Q ss_pred             EEEeCCCCccHHHHHHhcccCCEEEEEe
Q 017064          264 LGFNCVGGNSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       264 vvid~~g~~~~~~~~~~l~~~G~~v~~g  291 (378)
                      +|+.......++...+.|+|||.++...
T Consensus       150 ~v~~~~~~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         150 AIIRIYAPCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EEEEESCCCCHHHHHHHEEEEEEEEEEE
T ss_pred             EEeecCCHHHHHHHHHHhCCCcEEEEEe
Confidence            9998777777889999999999998876

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.89  E-value=0.086  Score=44.20  Aligned_cols=63  Identities=21%  Similarity=0.143  Sum_probs=38.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      +|||+||+|-+|...+..+...|- ++++.+.   ..       .+-.    |.  .+.+.+.+...+. ++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~---~~-------~~~~----Dl--~~~~~~~~~i~~~-~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVH---SK-------EFCG----DF--SNPKGVAETVRKL-RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTT---CS-------SSCC----CT--TCHHHHHHHHHHH-CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECC---Cc-------cccC----cC--CCHHHHHHHHHHc-CCCEEEEecc
Confidence            599999999999998887776664 4444421   10       0111    11  1233444443332 3899999997


Q ss_pred             C
Q 017064          271 G  271 (378)
Q Consensus       271 ~  271 (378)
                      .
T Consensus        64 ~   64 (298)
T d1n2sa_          64 H   64 (298)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.75  E-value=0.069  Score=40.23  Aligned_cols=93  Identities=15%  Similarity=0.257  Sum_probs=48.4

Q ss_pred             EEEEeCCCchHHHHHHHH-HHHcC---CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          191 SIVQNGATSIVGQCIIQI-ARHRG---IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~l-a~~~g---~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +|.|.||+|-+|+-.+++ +.+..   .++......+  +..+  .. .++........   ..+... ..   ++|++|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~--s~g~--~~-~~~~~~~~~~~---~~~~~~-~~---~~DivF   70 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ--LGQA--AP-SFGGTTGTLQD---AFDLEA-LK---ALDIIV   70 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS--TTSB--CC-GGGTCCCBCEE---TTCHHH-HH---TCSEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc--cccc--cc-cccCCceeeec---ccchhh-hh---cCcEEE
Confidence            689999999999999974 55432   3444444211  1000  00 00100000000   011111 12   399999


Q ss_pred             eCCCCccHHHHHHhcccCC---EEEEEecCCC
Q 017064          267 NCVGGNSASKVLKFLSQGG---TMVTYGGMSK  295 (378)
Q Consensus       267 d~~g~~~~~~~~~~l~~~G---~~v~~g~~~~  295 (378)
                      -|++.+........+...|   .++..+....
T Consensus        71 ~a~~~~~s~~~~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          71 TCQGGDYTNEIYPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred             EecCchHHHHhhHHHHhcCCCeecccCCcccc
Confidence            9999888766555554444   4666664443

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=90.59  E-value=0.89  Score=38.77  Aligned_cols=114  Identities=15%  Similarity=0.222  Sum_probs=74.7

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-------
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-------  248 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-------  248 (378)
                      |++.+.....-.+..+|+...+ |..|.+.+..++..|.++++++... .+.+|.+.++.+|++-++.....+       
T Consensus        62 a~~~i~~~~~~~~~~~vv~ass-GN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASA-GNHAQGVAFSSARLGVKALIVMPTA-TADIKVDAVRGFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEEC-SSSHHHHHHHHHHTTCCEEEECCSS-CCHHHHHHHHHHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeeccc-chhHHHHHHhhccccccceeecccc-chhHHHHHHHhcCCEEEEcCcccccchhhhh
Confidence            4445544333344455555554 9999999999999999999887554 578888999999998765322210       


Q ss_pred             ----------------H-------HHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEe
Q 017064          249 ----------------V-------KNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       249 ----------------~-------~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                                      .       ....++....+.+|.||-++|+--.    ...+..+.+..+++.+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                            0       0011111222359999999987432    45667777888888775

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.48  E-value=0.35  Score=39.48  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=32.0

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      -.|.+|+|.|. |.+|..+++++...|++|+++.+.
T Consensus        29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            46899999998 999999999999999999988854

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.33  E-value=0.057  Score=43.72  Aligned_cols=97  Identities=8%  Similarity=-0.075  Sum_probs=59.6

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC----CCcEEEccCcccHHHHHHHhcCCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GADEVFTESQLEVKNVKGLLANLP  260 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~i~~~~~~~g  260 (378)
                      ...++.+||=.|+  |.|..+..+++..+.+|+++.    .+++-.+.+++.    +...+ .....+..+   +....+
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD----~s~~~l~~ak~~~~~~~~~~~-~f~~~d~~~---~~~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVD----ITEDFLVQAKTYLGEEGKRVR-NYFCCGLQD---FTPEPD  126 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEE----SCHHHHHHHHHHTGGGGGGEE-EEEECCGGG---CCCCSS
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEee----cCHHHhhcccccccccccccc-ccccccccc---cccccc
Confidence            3567788999987  678888888777777887776    467766666542    22221 111111111   111123


Q ss_pred             CCcEEEeCCCC-----c----cHHHHHHhcccCCEEEEEe
Q 017064          261 EPALGFNCVGG-----N----SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       261 ~~Dvvid~~g~-----~----~~~~~~~~l~~~G~~v~~g  291 (378)
                      .+|+|+....-     +    .+..+.+.|+++|.++...
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            59999975442     1    2366789999999998875

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.27  E-value=0.78  Score=38.31  Aligned_cols=34  Identities=12%  Similarity=0.187  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .|.+|+|.|- |.+|..+++.+...|++|+++.+.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            4789999999 999999999999999999998853

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.17  E-value=0.26  Score=38.16  Aligned_cols=32  Identities=16%  Similarity=0.098  Sum_probs=28.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +|.|+||+|++|...++.+...|.+|++..|.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            47888777999999999999999999999863

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.04  E-value=1.4  Score=35.57  Aligned_cols=35  Identities=14%  Similarity=0.218  Sum_probs=29.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHH-HHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIA-RHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la-~~~g~~vi~~~~~  222 (378)
                      -.|.+|+|.|. |.+|..+++.+ +..|++++++.+.
T Consensus        29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence            45889999998 99999999877 5789999988753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.99  E-value=0.027  Score=43.47  Aligned_cols=98  Identities=14%  Similarity=0.088  Sum_probs=55.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-ccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.|.|++|-+|+..++++... ++++++.++.+... .   .-+++|-..-..... .....+.....   .+|++||.
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~-~---~g~d~~~~~~~~~~~~~~~~~~~~~~~---~~DViIDF   78 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-L---LGSDAGELAGAGKTGVTVQSSLDAVKD---DFDVFIDF   78 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-T---CSCCTTCSSSSSCCSCCEESCSTTTTT---SCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch-h---ccchhhhhhccccCCceeeccHHHHhc---ccceEEEe
Confidence            5899999999999999988754 77877776432111 0   000111000000000 00001111111   38999999


Q ss_pred             CCCccHHHHHHhcccCCEEEEEecCCC
Q 017064          269 VGGNSASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       269 ~g~~~~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      +..+.....++.....|.=+.+|.+..
T Consensus        79 s~p~~~~~~~~~a~~~~~~~ViGTTG~  105 (162)
T d1diha1          79 TRPEGTLNHLAFCRQHGKGMVIGTTGF  105 (162)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred             ccHHHHHHHHHHHHhccceeEEecCCC
Confidence            988777777777666776677775443

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.85  E-value=0.13  Score=41.64  Aligned_cols=96  Identities=11%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHH---cCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARH---RGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLA  257 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~---~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~  257 (378)
                      .++++.+||=+|+  |.|..+..+++.   .+++++++.    -+++-.+.++    +.+....+.....+   ......
T Consensus        36 ~~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD----~S~~ml~~A~~~~~~~~~~~~~~~~~~d---~~~~~~  106 (225)
T d1im8a_          36 FVTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGID----NSQPMVERCRQHIAAYHSEIPVEILCND---IRHVEI  106 (225)
T ss_dssp             HCCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEEC----SCHHHHHHHHHHHHTSCCSSCEEEECSC---TTTCCC
T ss_pred             hcCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeC----CCHHHHHHHHHHhHhhcccchhhhccch---hhcccc
Confidence            3689999999997  667777777874   478898876    4666555554    33322111111111   111111


Q ss_pred             CCCCCcEEEeCCCC---------ccHHHHHHhcccCCEEEEEe
Q 017064          258 NLPEPALGFNCVGG---------NSASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       258 ~~g~~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~g  291 (378)
                        ..+|+++-+..-         ..+++..+.|+|||.++...
T Consensus       107 --~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         107 --KNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             --CSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --ccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence              136777655442         12478899999999999865

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.82  E-value=0.87  Score=32.51  Aligned_cols=37  Identities=19%  Similarity=0.339  Sum_probs=32.7

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+.++++++|.|+ |.+|.-++..++.+|.+|..+.+.
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~   62 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQ   62 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeec
Confidence            4577899999999 999999999999999999988754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.81  E-value=0.76  Score=32.47  Aligned_cols=34  Identities=15%  Similarity=0.074  Sum_probs=30.3

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..++++|.|+ |.+|.-+++.+..+|.+|.++.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~   54 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGA   54 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEec
Confidence            3479999999 999999999999999999988854

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.66  E-value=1.3  Score=37.28  Aligned_cols=59  Identities=29%  Similarity=0.320  Sum_probs=47.4

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      +.+.+.++++|+...+ |..|++++..|+..|.+.++++... .+..|...++.+|++.+.
T Consensus        54 ~~g~~~~~~~vv~~Ss-GN~g~a~A~~a~~~G~~~~i~~p~~-~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEIVDATS-GNTGIALAYVAAARGYKITLTMPET-MSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEEEESCC-SHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCceeeeecC-CCchHHHHHHHHHhhccccccchhh-hhhhhhhhHHHhCCceEe
Confidence            3355677777666555 9999999999999999988887554 578888899999998775

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=89.65  E-value=1  Score=32.40  Aligned_cols=92  Identities=11%  Similarity=0.081  Sum_probs=59.7

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      ++++|.|. |.+|+..++.++  +..++++.    .++++.+.++..|... +..+..+.+.+++..-.  .++.++-++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~----~d~~~~~~~~~~~~~~-i~Gd~~~~~~L~~a~i~--~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLA----EDENVRKKVLRSGANF-VHGDPTRVSDLEKANVR--GARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEE----SCTTHHHHHHHTTCEE-EESCTTSHHHHHHTTCT--TCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEE----cchHHHHHHHhcCccc-cccccCCHHHHHHhhhh--cCcEEEEec
Confidence            46899998 999998877665  44566555    3566666777777654 44555554555553222  489999888


Q ss_pred             CCccH----HHHHHhcccCCEEEEEe
Q 017064          270 GGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       270 g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                      ..+..    ....+.+.|..+++...
T Consensus        71 ~~d~~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          71 ESDSETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             SSHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred             cchhhhHHHHHHHHHHCCCceEEEEE
Confidence            77543    34456677777766553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.64  E-value=0.43  Score=34.34  Aligned_cols=43  Identities=16%  Similarity=0.040  Sum_probs=34.6

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+.+...-..+++|+|.|+ |.+|.-+++.+..+|.+|.++.+.
T Consensus        20 ~i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          20 KLKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             HHHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             HHHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEec
Confidence            3444444456789999999 999999999999999999888643

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=89.59  E-value=0.11  Score=42.91  Aligned_cols=97  Identities=11%  Similarity=0.045  Sum_probs=55.2

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHH-hcCC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGL-LANL  259 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~-~~~~  259 (378)
                      -++++++||=+|+  |.|..+..+++.-..+|+++.    -+++..+.++    +.+...-+.....+   +... ....
T Consensus        21 ~~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD----~S~~~l~~A~~r~~~~~~~~~v~f~~~D---~~~~~~~~~   91 (252)
T d1ri5a_          21 YTKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVD----IAEVSINDARVRARNMKRRFKVFFRAQD---SYGRHMDLG   91 (252)
T ss_dssp             HCCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEE----SCHHHHHHHHHHHHTSCCSSEEEEEESC---TTTSCCCCS
T ss_pred             hCCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEec----CCHHHHHHHHHHHHhcCCCcceEEEEcc---hhhhccccc
Confidence            3578999999998  335556677776445788776    4666555554    34432111111001   1010 1111


Q ss_pred             CCCcEEEeCCCCc-----------cHHHHHHhcccCCEEEEE
Q 017064          260 PEPALGFNCVGGN-----------SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       260 g~~Dvvid~~g~~-----------~~~~~~~~l~~~G~~v~~  290 (378)
                      +.||+|+....-.           .+..+.+.|+|||.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            2499998655432           124567899999998764

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=89.44  E-value=0.77  Score=40.12  Aligned_cols=57  Identities=18%  Similarity=0.241  Sum_probs=46.1

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      +++++++| |...+|..|++.+..|+.+|.+.++++... .+++|.+.++.+|++-+..
T Consensus       140 ~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~-~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGA-AEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETT-SCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeecc-ccccccccccccCcceeec
Confidence            46777764 445559999999999999999999888654 5788888999999987753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.43  E-value=0.64  Score=31.32  Aligned_cols=67  Identities=16%  Similarity=0.069  Sum_probs=46.0

Q ss_pred             EEEEeCCCchHHHHH-HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCI-IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~a-v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|-+.|. |++|..+ +++++..|+.|.+....   ..+..+.|+++|+......+...+       .   +.|+|+-+.
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~---~~~~t~~L~~~Gi~i~~gh~~~~i-------~---~~d~vV~Ss   68 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIE---ETERTAYLRKLGIPIFVPHSADNW-------Y---DPDLVIKTP   68 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSS---CCHHHHHHHHTTCCEESSCCTTSC-------C---CCSEEEECT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCC---CChhHHHHHHCCCeEEeeeccccc-------C---CCCEEEEec
Confidence            4667788 8888765 58888999999988643   335556789999876544333221       1   388888766


Q ss_pred             CC
Q 017064          270 GG  271 (378)
Q Consensus       270 g~  271 (378)
                      +-
T Consensus        69 AI   70 (89)
T d1j6ua1          69 AV   70 (89)
T ss_dssp             TC
T ss_pred             Cc
Confidence            63

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=89.36  E-value=1.7  Score=33.06  Aligned_cols=99  Identities=14%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc---CCcEEEEecCCCCcHHHHHHHHhC-------CCcEEE-------ccCc------c
Q 017064          191 SIVQNGATSIVGQCIIQIARHR---GIHSINIIRDRAGSDEAKEKLKGL-------GADEVF-------TESQ------L  247 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~---g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~vi-------~~~~------~  247 (378)
                      +|.|.|- |-+|.++.+.+...   ..+++++-+.  .+.+....+.++       ..+--+       +...      .
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~--~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~   78 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDL--TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEP   78 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECS--SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCS
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccC--ccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCC
Confidence            5889998 99999999877643   4677777654  356666666432       111111       1111      1


Q ss_pred             cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC
Q 017064          248 EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       248 ~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      +.+++...--   ++|+||||+|. .....+..++..|-.-|.+..+..
T Consensus        79 ~p~~i~W~~~---gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          79 DPSKLPWKDL---GVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             SGGGSCHHHH---TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             ChhhCCcccc---CCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence            1233322111   39999999997 445677778888766666665543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.10  E-value=0.25  Score=38.75  Aligned_cols=84  Identities=6%  Similarity=-0.010  Sum_probs=52.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC------cEEEccCcccHHHHHHHhcCCCCCcE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLPEPAL  264 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga------~~vi~~~~~~~~~i~~~~~~~g~~Dv  264 (378)
                      +|.|.|+ |.+|.+.+.++...|-+|....+    +++..+.+..-+.      +..++.+-.....+.+...+   .|+
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r----~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~---ad~   80 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHM----NEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG---AEI   80 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECS----CHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT---CSC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEe----cHHHHHHHhhcccccccccccccccccccchhhhhccCC---CCE
Confidence            6999999 99999999888888888988885    5566655543221      11111111111223443433   899


Q ss_pred             EEeCCCCccHHHHHHhcc
Q 017064          265 GFNCVGGNSASKVLKFLS  282 (378)
Q Consensus       265 vid~~g~~~~~~~~~~l~  282 (378)
                      +|-++....+...++.++
T Consensus        81 iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          81 ILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EEECSCHHHHHHHHHHHC
T ss_pred             EEEcCcHHHHHHHHHHHH
Confidence            999998877766555443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=89.05  E-value=0.13  Score=39.13  Aligned_cols=90  Identities=12%  Similarity=0.042  Sum_probs=51.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--cEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|+|.|+ |.+|.+.+..+...|.+|..+.|.....    +.....+.  .........+   ......   .+|++|-+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY----CSVNLVETDGSIFNESLTAN---DPDFLA---TSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE----EEEEEECTTSCEEEEEEEES---CHHHHH---TCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh----hhhccccCCccccccccccc---hhhhhc---ccceEEEe
Confidence            5899999 9999888888878899999998653211    11111111  1110000001   111112   39999999


Q ss_pred             CCCccHHHHH----HhcccCCEEEEEe
Q 017064          269 VGGNSASKVL----KFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~~~~~~~~----~~l~~~G~~v~~g  291 (378)
                      +-......++    .++.++..++.+.
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ecccchHHHHHhhccccCcccEEeecc
Confidence            9987665444    4445566666654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=89.04  E-value=0.41  Score=37.24  Aligned_cols=94  Identities=16%  Similarity=0.177  Sum_probs=55.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.|.|++|-+|+-.++++..+ ..++..+.... ...++.... ..+.........    ........   +.|++|.|
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~-~aG~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~Dvvf~a   78 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADR-KAGEQFGSVFPHLITQDLPNLV----AVKDADFS---NVDAVFCC   78 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECST-TTTSCHHHHCGGGTTSCCCCCB----CGGGCCGG---GCSEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccc-cCCCccccccccccccccccch----hhhhhhhc---ccceeeec
Confidence            5899999999999999999865 45655554221 111112111 111110000000    00011111   39999999


Q ss_pred             CCCccHHHHHHhcccCCEEEEEec
Q 017064          269 VGGNSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       269 ~g~~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      ............+...+..+....
T Consensus        79 lp~~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          79 LPHGTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             CSSSHHHHHHHTSCSSCEEEECSS
T ss_pred             cccchHHHHHHHHHhcCcccccch
Confidence            999888877788888898877653

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=88.99  E-value=1.8  Score=32.74  Aligned_cols=100  Identities=16%  Similarity=0.110  Sum_probs=62.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhC-------CCcEE-------EccCc------ccH
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGL-------GADEV-------FTESQ------LEV  249 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~v-------i~~~~------~~~  249 (378)
                      +|.|.|- |-+|.++..++... ..+++++-+.  ...+....+.++       ..+--       ++...      .+.
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~--~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p   79 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDL--LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECS--SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCC--CCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh
Confidence            4788888 99999999988766 4677777764  355666666432       22211       11111      112


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCC
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKK  296 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~  296 (378)
                      +++..-..   ++|+||||+|.-. ...+..++..|-+-|.+..+..+
T Consensus        80 ~~i~W~~~---gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~d  124 (166)
T d1gado1          80 ANLKWDEV---GVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD  124 (166)
T ss_dssp             GGGCHHHH---TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS
T ss_pred             HHCCcccc---CCCEEEEccccccCHHHHHHHhcCCCceEEeeccccc
Confidence            33322111   3999999999754 46677888888777777755443

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.94  E-value=1.2  Score=33.49  Aligned_cols=94  Identities=12%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             EEEEeCCCchHHH-HHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064          191 SIVQNGATSIVGQ-CIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (378)
Q Consensus       191 ~VlV~g~~g~~G~-~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~  268 (378)
                      +|.|.|+ |.+|. ..+++++.. ..+++++++... ......+++++|......    ..+.+.+..... ++|+||++
T Consensus         6 rvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~-~~~~~~~a~~~~i~~~~~----~~d~l~~~~~~~-~iDiVf~A   78 (157)
T d1nvmb1           6 KVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDA-ASDGLARAQRMGVTTTYA----GVEGLIKLPEFA-DIDFVFDA   78 (157)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCT-TCHHHHHHHHTTCCEESS----HHHHHHHSGGGG-GEEEEEEC
T ss_pred             EEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecch-hccchhhhhhcCCccccc----ceeeeeeccccc-ccCEEEEc
Confidence            6899995 99986 566777755 457777774321 224456777888665322    122333322111 39999999


Q ss_pred             CCC-ccHHH--HHHhcccCCEEEEEe
Q 017064          269 VGG-NSASK--VLKFLSQGGTMVTYG  291 (378)
Q Consensus       269 ~g~-~~~~~--~~~~l~~~G~~v~~g  291 (378)
                      +.. ....+  +...++.|-.++...
T Consensus        79 Tpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          79 TSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             SCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            875 33443  345566677777665

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.78  E-value=0.17  Score=37.96  Aligned_cols=34  Identities=15%  Similarity=0.049  Sum_probs=30.3

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      -.|++|||.|+ |.+|..-+..+...|++|+++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            35799999999 99999999999999999999863

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.76  E-value=3.6  Score=30.72  Aligned_cols=133  Identities=13%  Similarity=0.055  Sum_probs=71.5

Q ss_pred             EEEEeCCCchHHHH-HHHHHHHc-CCcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQC-IIQIARHR-GIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~-av~la~~~-g~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|.|.|+ |.+|.- .....+.. +..++ +++.   ++++. ...+.++...++...+    ++   ...  .+|+|+-
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~-~~d~---~~~~~~~~~~~~~~~~~~~~~~----~l---l~~--~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTR---NPKVLGTLATRYRVSATCTDYR----DV---LQY--GVDAVMI   68 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECS---CHHHHHHHHHHTTCCCCCSSTT----GG---GGG--CCSEEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEE-EEEC---CHHHHHHHHHhcccccccccHH----Hh---ccc--ccceecc
Confidence            5789998 888864 45555544 44554 5543   44444 4456687655432211    22   222  3999998


Q ss_pred             CCCCcc-HHHHHHhcccCCEEEEEecCCCCCcc--ccchhhh-hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC
Q 017064          268 CVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPIT--VSTSAFI-FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG  343 (378)
Q Consensus       268 ~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  343 (378)
                      |+.... ...+..++..|=. |++..+...+..  ....... .++..+.--+ ..         +...+.++.+.+..|
T Consensus        69 ~tp~~~H~~~~~~al~~gk~-V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~-~r---------~~~~~~~~~~~~~~G  137 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLGIP-TFVDKPLAASAQECENLYELAEKHHQPLYVGF-NG---------FDAMVQDWLQVAAAG  137 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC-GT---------HHHHHHHHHHHHHHT
T ss_pred             cccccccccccccccccccc-cccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe-Cc---------CCHHHHHHHHHhhcC
Confidence            887644 4667777776654 666533222111  1111222 2344332211 11         224467777888888


Q ss_pred             Ccccc
Q 017064          344 KLKYD  348 (378)
Q Consensus       344 ~~~~~  348 (378)
                      ++-..
T Consensus       138 ~ig~~  142 (167)
T d1xeaa1         138 KLPTH  142 (167)
T ss_dssp             CCCHH
T ss_pred             CCCcE
Confidence            87643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.60  E-value=1  Score=34.68  Aligned_cols=87  Identities=10%  Similarity=0.031  Sum_probs=52.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE----EEccCc-ccHHHHHHHhcCCCCCcEE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE----VFTESQ-LEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~----vi~~~~-~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +|.|.|+ |.+|.+.+..+...|-+|....|..  .++..+.........    .+.... .....+.+...+   .|+|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~--~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---ad~I   75 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEF--DTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN---AEVV   75 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGG--GHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT---CSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecc--cHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhc---cchh
Confidence            5889999 9999998888888889999887531  233333333211100    000000 011234444443   9999


Q ss_pred             EeCCCCccHHHHHHhccc
Q 017064          266 FNCVGGNSASKVLKFLSQ  283 (378)
Q Consensus       266 id~~g~~~~~~~~~~l~~  283 (378)
                      |.++....+...++.+.+
T Consensus        76 i~avps~~~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EECSCGGGHHHHHHHHTT
T ss_pred             hcccchhhhHHHHHhhcc
Confidence            999998877666654443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=88.53  E-value=3.4  Score=30.23  Aligned_cols=79  Identities=19%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-H-HHHHHHhcCCCCCcEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-V-KNVKGLLANLPEPALGFN  267 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~-~~i~~~~~~~g~~Dvvid  267 (378)
                      ++|.|.|+.|.+|...+..++..|..|.+..+...    ........+++.++...... . ..+.........=.+++|
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW----AVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG----GGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc----cccchhhhhccccccccchhhheeeeecccccccCCceEEE
Confidence            58999996699999999999999999998876432    11222335677776554432 1 223333322222358888


Q ss_pred             CCCCc
Q 017064          268 CVGGN  272 (378)
Q Consensus       268 ~~g~~  272 (378)
                      +++..
T Consensus        86 ~~Svk   90 (152)
T d2pv7a2          86 LTSVK   90 (152)
T ss_dssp             CCSCC
T ss_pred             ecccC
Confidence            88753

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.47  E-value=0.53  Score=38.68  Aligned_cols=35  Identities=11%  Similarity=0.113  Sum_probs=31.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      -.|.+|+|.|- |.+|..+++.+...|++++++.|.
T Consensus        34 l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            46789999998 999999999999999999998763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.45  E-value=1.1  Score=33.55  Aligned_cols=138  Identities=12%  Similarity=0.166  Sum_probs=73.7

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC---cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~---~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      |-+|.|.||+|-+|+-.++++..+..   ++....     +.+      ..|-.................  .....|++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-----s~~------s~G~~~~~~~~~~~~~~~~~~--~~~~~d~~   67 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-----SAR------SAGKSLKFKDQDITIEETTET--AFEGVDIA   67 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-----CGG------GTTCEEEETTEEEEEEECCTT--TTTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-----ccc------cccccccccCCcccccccchh--hhhhhhhh
Confidence            45799999999999999999987743   333232     211      122211111111000000000  01148999


Q ss_pred             EeCCCCccH-HHHHHhcccCCEEEEEecCCCCCcccc--chhhhh----cCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064          266 FNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVS--TSAFIF----KDLSLKGFWLQKWLSSEKATECRNMIDYLLC  338 (378)
Q Consensus       266 id~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (378)
                      +-+.+.... ..+......+-++|..+...+.....+  ..++..    +..++...          |......+.-+.-
T Consensus        68 f~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAn----------PgC~tt~i~~l~P  137 (154)
T d2gz1a1          68 LFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIAC----------PNAAWNSVQIAET  137 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEEC----------CCTHHHHHHHHHH
T ss_pred             hhccCccchhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCcCceEEC----------CCCHHHHHHHHHH
Confidence            999987655 445567788889999886554332222  222222    11122211          1222233444678


Q ss_pred             HHHcCCccccc
Q 017064          339 LAREGKLKYDM  349 (378)
Q Consensus       339 ~l~~g~~~~~~  349 (378)
                      ++++|.+++..
T Consensus       138 L~~~~lik~~~  148 (154)
T d2gz1a1         138 LHERGLVRPTA  148 (154)
T ss_dssp             HHHTTCCSCCS
T ss_pred             HHHhcCCCccc
Confidence            89999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.27  E-value=0.53  Score=40.33  Aligned_cols=78  Identities=13%  Similarity=0.169  Sum_probs=44.9

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC---CcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~---~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      .+|||+||+|-+|...+..+...|..|.++++...   ....+......-+.+. +..+-.+.+.+..+..+   +|.|+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~-~~~Di~d~~~~~~~~~~---~~~v~   78 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVEL-VVGDIADAELVDKLAAK---ADAIV   78 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEE-EECCTTCHHHHHHHHTT---CSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEE-EEccCCCHHHHHHHHhh---hhhhh
Confidence            47999999999999999888877876555443210   1111111111122222 22222344556666554   88888


Q ss_pred             eCCCC
Q 017064          267 NCVGG  271 (378)
Q Consensus       267 d~~g~  271 (378)
                      .+++.
T Consensus        79 ~~a~~   83 (346)
T d1oc2a_          79 HYAAE   83 (346)
T ss_dssp             ECCSC
T ss_pred             hhhhc
Confidence            88765

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.22  E-value=0.21  Score=40.04  Aligned_cols=100  Identities=12%  Similarity=0.124  Sum_probs=56.6

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcE---EEccCccc-HHH
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADE---VFTESQLE-VKN  251 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~ga~~---vi~~~~~~-~~~  251 (378)
                      .+.+....++||=.|.  +.|..++.+|+++  +.+++++.    .+++..+.+    +..|...   ++..+..+ ..+
T Consensus        50 ~lv~~~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid----~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~  123 (214)
T d2cl5a1          50 AVIREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTME----MNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQ  123 (214)
T ss_dssp             HHHHHHCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEE----SCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGG
T ss_pred             HHHHhhCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEe----ccHHHHHHHHHHHHHcCCCccceeeeccccccccc
Confidence            3344445589999985  6788888899876  56777776    345544444    4456432   22222211 223


Q ss_pred             HHHHhcCCCCCcEEEeCCCCcc------HHHHHHhcccCCEEE
Q 017064          252 VKGLLANLPEPALGFNCVGGNS------ASKVLKFLSQGGTMV  288 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g~~~------~~~~~~~l~~~G~~v  288 (378)
                      +...... +.+|.+|--.....      +..+++.|+|||.++
T Consensus       124 l~~~~~~-~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         124 LKKKYDV-DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             HHHHSCC-CCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhcccc-cccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            3332222 24898875443332      234566799999654

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.02  E-value=3  Score=31.56  Aligned_cols=100  Identities=12%  Similarity=0.022  Sum_probs=61.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhC-------CCcEEE-------ccCc------ccH
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGL-------GADEVF-------TESQ------LEV  249 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~vi-------~~~~------~~~  249 (378)
                      +|.|.|- |-+|.++...+... ..+++++-+.. .+.+....+.++       ..+.-+       +...      .+.
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~-~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p   80 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPF-IDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSS-SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCC-ccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence            5889998 99999999877655 57877776532 355655555432       221111       1111      011


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCC
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      +++..  ...| +|+|+||+|... ...+..++..|-+-|.+..+..
T Consensus        81 ~~i~W--~~~~-vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          81 SKIKW--GDAG-AEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             GGCCT--TTTT-CCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             hhCCc--cccC-CCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            22211  1223 999999999844 4666778888877777775544

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=87.92  E-value=1.2  Score=33.96  Aligned_cols=99  Identities=14%  Similarity=0.177  Sum_probs=59.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc----CCcEEEEecCCCCcHHHHHHHHh-------CCCcEE-------EccCc------
Q 017064          191 SIVQNGATSIVGQCIIQIARHR----GIHSINIIRDRAGSDEAKEKLKG-------LGADEV-------FTESQ------  246 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~----g~~vi~~~~~~~~~~~~~~~~~~-------~ga~~v-------i~~~~------  246 (378)
                      +|.|.|- |-+|.+....+...    ...++++-+.  .+.+....+.+       +....-       ++...      
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~--~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~   79 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDL--GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN   79 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECS--SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCC--CChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec
Confidence            4789998 99999999877543    3456666554  35566666643       222211       11111      


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      .+++++..  ... ++|+|+||+|.- ....+..+|..|-+-|.+..+..
T Consensus        80 ~~p~~i~W--~~~-gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          80 RNPAQLPW--GAL-KVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             SCGGGSCT--TTT-TCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             CCHHHCcc--ccc-ccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            01122222  122 399999999974 44677888888887788875544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.91  E-value=0.73  Score=32.80  Aligned_cols=34  Identities=12%  Similarity=0.052  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..++++|.|+ |.+|.=.++.++.+|.+|.++.+.
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEee
Confidence            3488999999 999999999999999999998854

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.89  E-value=0.84  Score=35.01  Aligned_cols=43  Identities=19%  Similarity=0.053  Sum_probs=30.3

Q ss_pred             HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ..+|.+...--.|++|||.|+ |+.+.+++..+...| ++.++.|
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR   48 (177)
T d1nvta1           6 RMALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANR   48 (177)
T ss_dssp             HHHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECS
T ss_pred             HHHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehh
Confidence            344555444457899999999 999998887765555 6666664

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.87  E-value=1.1  Score=37.97  Aligned_cols=105  Identities=15%  Similarity=0.122  Sum_probs=73.8

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----------------
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----------------  247 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----------------  247 (378)
                      +.++++...+|...+|..|++.+..|+.+|.+.++++... .+..|.+.++.+|++.++.....                
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~-~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~  137 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPAS-MSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKT  137 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhh-hhhhhhhhhhccCcceEEeeccccccccchhHHHHHHhC
Confidence            5566776667777779999999999999999988887554 58888999999999866422110                


Q ss_pred             -------------cH--------HHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEe
Q 017064          248 -------------EV--------KNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       248 -------------~~--------~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                                   +.        .++..-..+  .+|.++-++|+.-.    ...+....+.-+++-+.
T Consensus       138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~--~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGG--KIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTT--CCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCceecccccccchHHHhhhhHHHHHHHhccC--CCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                         00        123333322  59999999987433    45566677788887665

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.80  E-value=0.72  Score=35.92  Aligned_cols=97  Identities=13%  Similarity=0.027  Sum_probs=58.5

Q ss_pred             HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc----EEEccCcccHHH
Q 017064          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD----EVFTESQLEVKN  251 (378)
Q Consensus       180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~----~vi~~~~~~~~~  251 (378)
                      |.+.....++++||=.|+  |.|..++.+++ .+.+|+++.    .++...+.++    ..+..    .++..+..  + 
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD----~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~--~-  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMAD----INRRAIKLAKENIKLNNLDNYDIRVVHSDLY--E-  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEE----SCHHHHHHHHHHHHHTTCTTSCEEEEECSTT--T-
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceee----eccccchhHHHHHHHhCCccceEEEEEcchh--h-
Confidence            334467888999999987  56677777775 467887765    4566655554    23322    22222211  1 


Q ss_pred             HHHHhcCCCCCcEEEeCCC----Ccc----HHHHHHhcccCCEEEEE
Q 017064          252 VKGLLANLPEPALGFNCVG----GNS----ASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       252 i~~~~~~~g~~Dvvid~~g----~~~----~~~~~~~l~~~G~~v~~  290 (378)
                        ...++  .+|+|+-...    .+.    +..+.+.|+++|.++..
T Consensus       114 --~~~~~--~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         114 --NVKDR--KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             --TCTTS--CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             --hhccC--CceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence              11122  4999996432    221    36678999999998654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.74  E-value=0.24  Score=41.17  Aligned_cols=31  Identities=13%  Similarity=0.177  Sum_probs=28.2

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      +++|+|.|| |.-|+.|+..++..|.+|+++-
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE   31 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFE   31 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEEC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEe
Confidence            578999999 9999999999999999988876

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.74  E-value=0.56  Score=33.64  Aligned_cols=33  Identities=12%  Similarity=0.107  Sum_probs=29.8

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++|.|+ |.+|.-+++++..+|.+|.++.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEec
Confidence            479999999 999999999999999999988743

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=87.62  E-value=2.1  Score=32.53  Aligned_cols=99  Identities=17%  Similarity=0.094  Sum_probs=59.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC---CcEEEEecCCCCcHHHHHHHHhC-------CCcEE--------EccCc------
Q 017064          191 SIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKLKGL-------GADEV--------FTESQ------  246 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g---~~vi~~~~~~~~~~~~~~~~~~~-------ga~~v--------i~~~~------  246 (378)
                      +|.|.|- |-+|.++.+.+..+.   .+++++-+.  .+.+....+.++       ..+..        ++...      
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~ivaINd~--~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~   78 (172)
T d1rm4a1           2 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDT--GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD   78 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECT--TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEEcCC--CCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecC
Confidence            5789998 999999998776443   566666655  356666665432       11111        12111      


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      .+.+++...-.   ++|+|+||+|. .....+..++..|-.-|.+..+..
T Consensus        79 ~~p~~i~W~~~---gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~k  125 (172)
T d1rm4a1          79 RNPVNLPWGDM---GIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK  125 (172)
T ss_dssp             SCGGGSCHHHH---TCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCCB
T ss_pred             CChHHCChhhc---CCCEEEecCceEccHHHHHHHHhcCCceEEeecccc
Confidence            11223222111   39999999997 445677788888876666765543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.36  E-value=0.64  Score=32.92  Aligned_cols=33  Identities=12%  Similarity=0.057  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++|+|.|+ |.+|.-+++.++.+|.+|.++.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~   53 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMF   53 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeec
Confidence            478999999 999999999999999999888754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.34  E-value=0.25  Score=38.40  Aligned_cols=33  Identities=12%  Similarity=0.038  Sum_probs=28.4

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~  222 (378)
                      +++|+|.|| |+.|+.++..++..|.+ |+++.+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence            578999999 99999999999999995 7666544

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=86.95  E-value=0.34  Score=39.52  Aligned_cols=34  Identities=26%  Similarity=0.292  Sum_probs=29.9

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..++|+|.|| |..|++++..++..|.+|+++-+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3578999999 999999999999999999988753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=86.56  E-value=0.7  Score=35.42  Aligned_cols=93  Identities=15%  Similarity=0.223  Sum_probs=53.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc---ccHHHHHHHhcCCCCCcEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ---LEVKNVKGLLANLPEPALGFN  267 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~---~~~~~i~~~~~~~g~~Dvvid  267 (378)
                      +|.|.|. |.+|...+.-+...|.+|++..+    ++++.+.+.+.++........   .....+......   .+.++.
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   74 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNR----TYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKK---PRKALI   74 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECS----SHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCS---SCEEEE
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHcCCccccccchhhhhhhhHHHHhccc---ceEEEE
Confidence            3778898 99999888888888999998874    677776665444321111110   112223333222   555555


Q ss_pred             CCCCcc-----HHHHHHhcccCCEEEEEe
Q 017064          268 CVGGNS-----ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       268 ~~g~~~-----~~~~~~~l~~~G~~v~~g  291 (378)
                      +.....     +......+.++..++.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          75 LVQAGAATDSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             CCCCSHHHHHHHHHHHHHCCTTCEEEECC
T ss_pred             eecCcchhhhhhhhhhhhccccceecccC
Confidence            555422     134455666666665554

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=86.17  E-value=0.56  Score=38.38  Aligned_cols=104  Identities=13%  Similarity=0.076  Sum_probs=59.0

Q ss_pred             HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (378)
Q Consensus       181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~  259 (378)
                      .....+....+||=+|+  +.|..+..+++.. +.+++++. ....-+...+.+.+.|...-+.....+   ....... 
T Consensus        73 ~~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D-~~~~~~~a~~~~~~~~~~~rv~~~~~D---~~~~~~~-  145 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLE-MAGTVDTARSYLKDEGLSDRVDVVEGD---FFEPLPR-  145 (253)
T ss_dssp             HHHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEE-CTTHHHHHHHHHHHTTCTTTEEEEECC---TTSCCSS-
T ss_pred             HhhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEcc-CHHHHHHHHHHHHHhhcccchhhcccc---chhhccc-
Confidence            34456778889998886  6788899999877 56666554 221122233344444432111111111   1111112 


Q ss_pred             CCCcEEEeCCCC-----c----cHHHHHHhcccCCEEEEEec
Q 017064          260 PEPALGFNCVGG-----N----SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       260 g~~Dvvid~~g~-----~----~~~~~~~~l~~~G~~v~~g~  292 (378)
                       ++|+|+-...-     +    .++++.+.|+|||+++....
T Consensus       146 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             -chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence             48999854331     1    24678899999999988763

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=86.13  E-value=0.71  Score=37.81  Aligned_cols=99  Identities=10%  Similarity=-0.098  Sum_probs=60.9

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~i~~~~~~~g~~  262 (378)
                      ....++.+||=.||  +.|..+.++++....+|+++.    .+++-.+.+++ +.....++....+   +..+....+.+
T Consensus        89 l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD----~s~~~l~~a~~~~~~~~~~~~~~~d---~~~~~~~~~~f  159 (254)
T d1xtpa_          89 LPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLE----PVKHMLEEAKRELAGMPVGKFILAS---METATLPPNTY  159 (254)
T ss_dssp             STTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEE----SCHHHHHHHHHHTTTSSEEEEEESC---GGGCCCCSSCE
T ss_pred             CCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEc----CCHHHHHhhhccccccccceeEEcc---ccccccCCCcc
Confidence            34456778888886  678888888887666787776    47777777764 2221122221111   11221122359


Q ss_pred             cEEEeCCCCc---------cHHHHHHhcccCCEEEEEe
Q 017064          263 ALGFNCVGGN---------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       263 Dvvid~~g~~---------~~~~~~~~l~~~G~~v~~g  291 (378)
                      |+|+..-.-.         .+..+.+.|+++|.++...
T Consensus       160 D~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            9998655421         1366788999999998764

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.08  E-value=0.13  Score=38.70  Aligned_cols=92  Identities=18%  Similarity=0.268  Sum_probs=48.8

Q ss_pred             EEEEeCCCchHHHHHHHHHH-Hc---CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064          191 SIVQNGATSIVGQCIIQIAR-HR---GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~-~~---g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi  266 (378)
                      +|.|.||+|-+|+-.++++. +.   ...+.......  +..+.   ..++-+........+   ... ..   ..|++|
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~--~~gk~---~~~~~~~~~~~~~~~---~~~-~~---~~DvvF   69 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ--IGVPA---PNFGKDAGMLHDAFD---IES-LK---QLDAVI   69 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC--CSSBC---CCSSSCCCBCEETTC---HHH-HT---TCSEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc--ccccc---cccCCcceeeecccc---hhh-hc---cccEEE
Confidence            58899999999999998553 22   34554444221  11110   011111111000001   111 12   399999


Q ss_pred             eCCCCccHHHHHHhcccCC---EEEEEecCC
Q 017064          267 NCVGGNSASKVLKFLSQGG---TMVTYGGMS  294 (378)
Q Consensus       267 d~~g~~~~~~~~~~l~~~G---~~v~~g~~~  294 (378)
                      -|+++.........+...|   .+|..+...
T Consensus        70 ~alp~~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          70 TCQGGSYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             EecCchHHHHHhHHHHHcCCceEEEeCCccc
Confidence            9999988766665555444   377766443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=86.05  E-value=0.56  Score=38.97  Aligned_cols=75  Identities=12%  Similarity=0.224  Sum_probs=41.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      |||+||+|-+|...+..+...|.+ |+++ |.- ....+...+.+.......+..+. ...+... .....+++++.+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~-d~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVV-DNL-KDGTKFVNLVDLNIADYMDKEDF-LIQIMAG-EEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEE-ECC-SSGGGGHHHHTSCCSEEEEHHHH-HHHHHTT-CCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEE-ECC-CCcchhhcccccchhhhccchHH-HHHHhhh-hcccchhhhhhhcc
Confidence            899999999999999888888974 5554 321 12223333444443333322221 1111111 12223788887665

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.58  E-value=1.8  Score=31.87  Aligned_cols=33  Identities=12%  Similarity=0.211  Sum_probs=27.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGI-HSINIIRDR  223 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~  223 (378)
                      +|.|.||+|.+|...+.++...|. .-++..|..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~   35 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA   35 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecc
Confidence            689999889999999999988876 777777753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.55  E-value=1.8  Score=31.14  Aligned_cols=66  Identities=20%  Similarity=0.240  Sum_probs=46.7

Q ss_pred             HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (378)
Q Consensus       183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i  252 (378)
                      .+++..-+.+++.-..-..-..+.+++|.+|.+ +++.+    .+++..+.++++|++.++++.......+
T Consensus        60 ~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~----~~~~~~~~l~~~G~d~vi~p~~~~a~~i  126 (132)
T d1lssa_          60 DAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARI----SEIEYKDVFERLGVDVVVSPELIAANYI  126 (132)
T ss_dssp             HTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEEC----SSTTHHHHHHHTTCSEEECHHHHHHHHH
T ss_pred             hcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEe----cCHHHHHHHHHCCCCEEECHHHHHHHHH
Confidence            377777787777655466778888999999874 55444    3566677889999999997654333333

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.54  E-value=1.1  Score=32.06  Aligned_cols=35  Identities=14%  Similarity=0.069  Sum_probs=30.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +..++++|.|+ |-+|+=+++.+..+|.+|.++.+.
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~   57 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFA   57 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEc
Confidence            34589999999 999999999999999999988754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.42  E-value=1  Score=32.20  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .++++|.|+ |.+|.-+++.++.+|.+|.++.+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeec
Confidence            379999999 999999999999999999998864

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=85.35  E-value=1.8  Score=32.98  Aligned_cols=98  Identities=13%  Similarity=0.115  Sum_probs=58.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhC-------CCcEEEccC-------------cccH
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGL-------GADEVFTES-------------QLEV  249 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~vi~~~-------------~~~~  249 (378)
                      +|.|.|- |-+|.+....+... ..+++++-+.  ...+....+.++       ..+.-++.+             ..+.
T Consensus         3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaINd~--~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p   79 (171)
T d3cmco1           3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVNDL--TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP   79 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHTTCTTEEEEEEECS--SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEcCC--CCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCH
Confidence            5789998 99999999777644 4677777654  355666665432       111111111             1112


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCC
Q 017064          250 KNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS  294 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  294 (378)
                      +++.....   ++|+||||+|.- ..+.+..++..|-.-|.+..+.
T Consensus        80 ~~i~W~~~---~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          80 ENLAWGEI---GVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             GGCCTGGG---TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             HHcccccc---CCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence            22222111   399999999974 4467778888877666666443

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.29  E-value=1.9  Score=35.88  Aligned_cols=49  Identities=29%  Similarity=0.344  Sum_probs=40.6

Q ss_pred             EEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       193 lV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      +|...+|..|.++...|+.+|.+.++++... .++.|.+.++.+|++-++
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPET-MSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeecccc-ccHHHeeccccCCcEEEE
Confidence            5666669999999999999999988887554 478888999999998665

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.09  E-value=1.4  Score=35.59  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=29.8

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHH-HHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIA-RHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la-~~~g~~vi~~~~~  222 (378)
                      -.|.+|+|.|- |.+|..+++++ +..|++++++.+.
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            36899999999 99999999876 5679999998854

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.90  E-value=0.64  Score=33.33  Aligned_cols=33  Identities=18%  Similarity=0.152  Sum_probs=29.6

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ..++++|.|+ |.+|.-.++.++.+|.+|.++.+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEe
Confidence            3468999999 99999999999999999999874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=84.80  E-value=0.59  Score=39.57  Aligned_cols=26  Identities=8%  Similarity=0.243  Sum_probs=22.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcE
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHS  216 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~v  216 (378)
                      +|||+|++|-+|...+..+...|..|
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v   27 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPD   27 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCc
Confidence            58999999999999999888777643

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=84.78  E-value=7  Score=32.42  Aligned_cols=96  Identities=16%  Similarity=0.150  Sum_probs=68.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-c----H-----------------
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-E----V-----------------  249 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~----~-----------------  249 (378)
                      .+|...+|..|.+++..|+.+|.+.++++... .+.++.+.++.+|++-+...... .    .                 
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~~  149 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLD-APEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDH  149 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeeccccc-ccHHHHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCccc
Confidence            46666779999999999999999988888655 57888889999999877632221 0    0                 


Q ss_pred             -----------HHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEe
Q 017064          250 -----------KNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       250 -----------~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                                 .++.+-.   +.+|.+|-++|+--.    ...++...+..+++-+.
T Consensus       150 ~~~~~g~~t~~~Ei~~q~---~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         150 PHVLAGQGTAAKELFEEV---GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHHTHHHHHHHHHH---CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cccccccchHHHHHHHhc---CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                       1122212   348999988886432    45677788888887765

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=84.67  E-value=1.9  Score=36.36  Aligned_cols=101  Identities=9%  Similarity=0.018  Sum_probs=52.6

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc---E-EEccCcccHHHHHHH
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---E-VFTESQLEVKNVKGL  255 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~---~-vi~~~~~~~~~i~~~  255 (378)
                      ..+.+|++||=..+  +.|-.++.++ ..|++-++.++.   ++...+.++    ..|.+   + ++..+..  +.++..
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa-~~ga~~V~~vD~---s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~--~~l~~~  211 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAA-MGGAMATTSVDL---AKRSRALSLAHFEANHLDMANHQLVVMDVF--DYFKYA  211 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHH-HTTBSEEEEEES---CTTHHHHHHHHHHHTTCCCTTEEEEESCHH--HHHHHH
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHH-hCCCceEEEecC---CHHHHHHHHHHHHHhcccCcceEEEEccHH--HHHHHH
Confidence            45678999986654  3333344433 357754444443   444444443    23322   1 2222221  223332


Q ss_pred             hcCCCCCcEEEeCCCC----------------ccHHHHHHhcccCCEEEEEec
Q 017064          256 LANLPEPALGFNCVGG----------------NSASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       256 ~~~~g~~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  292 (378)
                      ......||+||--...                ..+..++++|+|||.++++..
T Consensus       212 ~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         212 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             HhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2222259999843221                022567889999999998763

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.63  E-value=0.92  Score=35.37  Aligned_cols=31  Identities=19%  Similarity=0.316  Sum_probs=27.8

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      ++|.|.|+ |.+|...++++...|.+|+....
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~   35 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ   35 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEEC
Confidence            57999999 99999999999999999998874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.63  E-value=0.61  Score=37.60  Aligned_cols=34  Identities=21%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      +.-++|+|.|| |..|++++..+...|.+|.++.+
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILAR   37 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeC
Confidence            44568999999 99999999999999999988875

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.58  E-value=5.3  Score=29.97  Aligned_cols=100  Identities=14%  Similarity=0.047  Sum_probs=61.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhC-------CCcEE-------EccCc------ccH
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGL-------GADEV-------FTESQ------LEV  249 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~-------ga~~v-------i~~~~------~~~  249 (378)
                      +|.|.|- |-+|.++...+... ..+++++-+.. .+.+....+.++       ..+..       ++...      .+.
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~-~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPF-MDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTT-CCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCC-CChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence            5788888 99999999888755 56777766532 355666666432       22111       11111      122


Q ss_pred             HHHHHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCC
Q 017064          250 KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSK  295 (378)
Q Consensus       250 ~~i~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  295 (378)
                      +++-....   ++|+|+||+|.-. ...+..++..|-.-|.+..+..
T Consensus        80 ~~i~W~~~---gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  123 (166)
T d2b4ro1          80 SQIPWGKC---QVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK  123 (166)
T ss_dssp             GGCCHHHH---TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             HHcccccc---CCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence            23222222   3999999999744 4567788888876777765544

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.55  E-value=0.56  Score=37.73  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=30.9

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      ..+++|+|.|+ |..|+.++..++..|.+|+++...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            45789999999 999999999999999999888643

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.53  E-value=4  Score=33.75  Aligned_cols=57  Identities=26%  Similarity=0.323  Sum_probs=45.6

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      ..++++.+|+..++ |..|.+++..|+.+|.+.++++... .++.+...++.+|++.+.
T Consensus        56 g~~~~~~~vv~ass-Gn~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~~~~~ga~v~~  112 (302)
T d1fcja_          56 GVLKPGVELVEPTN-GNTGIALAYVAAARGYKLTLTMPET-MSIERRKLLKALGANLVL  112 (302)
T ss_dssp             TCCCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEE
T ss_pred             CCCCCCceEEEecc-ccchhHHHHHHHHhccCCceEEeec-CcHHHHHHHHHhccceEE
Confidence            56777777655554 9999999999999999988888554 577888888999987664

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=84.22  E-value=0.72  Score=36.86  Aligned_cols=98  Identities=13%  Similarity=0.124  Sum_probs=58.9

Q ss_pred             HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCcccHHHHHHHh
Q 017064          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLL  256 (378)
Q Consensus       179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~i~~~~  256 (378)
                      .++......++++||=.|+  +.|..+..+++ .|.+|+++.    -+++..+.+++...+  .++..+-   +..   .
T Consensus        11 ~~~~~~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD----~s~~~i~~a~~~~~~~~~~~~~~~---~~~---~   77 (225)
T d2p7ia1          11 MVRAFTPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVE----ASEEAISHAQGRLKDGITYIHSRF---EDA---Q   77 (225)
T ss_dssp             HHHHHGGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEE----SCHHHHHHHHHHSCSCEEEEESCG---GGC---C
T ss_pred             HHHHhhhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEe----CcHHHhhhhhcccccccccccccc---ccc---c
Confidence            4455555567788999987  55777766654 588988887    477777887753222  2222221   111   1


Q ss_pred             cCCCCCcEEEeCCCCcc-------HHHHH-HhcccCCEEEEE
Q 017064          257 ANLPEPALGFNCVGGNS-------ASKVL-KFLSQGGTMVTY  290 (378)
Q Consensus       257 ~~~g~~Dvvid~~g~~~-------~~~~~-~~l~~~G~~v~~  290 (378)
                      .. +.+|+|+..-.-..       +.... ++|++||.++..
T Consensus        78 ~~-~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          78 LP-RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             CS-SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cc-cccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            12 25999985432111       24455 679999998865

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=84.20  E-value=0.36  Score=36.10  Aligned_cols=82  Identities=12%  Similarity=0.080  Sum_probs=46.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCcE-EEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064          192 IVQNGATSIVGQCIIQIARHRGIHS-INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (378)
Q Consensus       192 VlV~g~~g~~G~~av~la~~~g~~v-i~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g  270 (378)
                      |-+.|+ |.+|...++.++. +..+ .+..    .+.++.+.+.+.+.....+..+        ...   ..|+||-|+.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~-~~~~~~v~~----R~~~~~~~l~~~~~~~~~~~~~--------~~~---~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKD-RYEIGYILS----RSIDRARNLAEVYGGKAATLEK--------HPE---LNGVVFVIVP   64 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC-----CCCEEC----SSHHHHHHHHHHTCCCCCSSCC--------CCC------CEEECSC
T ss_pred             EEEEeC-cHHHHHHHHHHHh-CCCEEEEEe----CChhhhcchhhcccccccchhh--------hhc---cCcEEEEecc
Confidence            346788 9999988776654 3443 3344    3666666665544332222111        111   3899999999


Q ss_pred             CccHHHHHHhcccCCEE-EEE
Q 017064          271 GNSASKVLKFLSQGGTM-VTY  290 (378)
Q Consensus       271 ~~~~~~~~~~l~~~G~~-v~~  290 (378)
                      .+.+...+..++..|++ +.+
T Consensus        65 d~~i~~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          65 DRYIKTVANHLNLGDAVLVHC   85 (153)
T ss_dssp             TTTHHHHHTTTCCSSCCEEEC
T ss_pred             chhhhHHHhhhcccceeeeec
Confidence            88888888888755554 444

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=83.78  E-value=0.49  Score=36.25  Aligned_cols=29  Identities=14%  Similarity=0.193  Sum_probs=26.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      -|+|.|+ |+.|+.|+..|...|.+|+++.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie   31 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMG   31 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEC
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEE
Confidence            4889999 9999999999999999988876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=83.65  E-value=0.56  Score=39.39  Aligned_cols=34  Identities=15%  Similarity=0.165  Sum_probs=29.6

Q ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      ....++|+|.|+ |..|+.++..++..|.+|+++-
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE   60 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLE   60 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEe
Confidence            445679999999 9999999999988999988776

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=83.37  E-value=2.3  Score=33.68  Aligned_cols=90  Identities=11%  Similarity=0.075  Sum_probs=55.4

Q ss_pred             EEEEeCCCchHHHH-HHHHHH-HcCCcEEEEecCCCCcHHH-HHHHHhCCCc--EEEccCcccHHHHHHHhcCCCCCcEE
Q 017064          191 SIVQNGATSIVGQC-IIQIAR-HRGIHSINIIRDRAGSDEA-KEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALG  265 (378)
Q Consensus       191 ~VlV~g~~g~~G~~-av~la~-~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~Dvv  265 (378)
                      +|.|.|+ |.+|.. .+...+ .-+.+++++++.   ++++ ...++.+|..  .+..+++     +.++.... .+|+|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~---~~~~a~~~~~~~~i~~~~~~~~~d-----~~ell~~~-~iD~V  104 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSG---NAEKAKIVAAEYGVDPRKIYDYSN-----FDKIAKDP-KIDAV  104 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECS---CHHHHHHHHHHTTCCGGGEECSSS-----GGGGGGCT-TCCEE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecC---CHHHHHHHHHhhccccccccccCc-----hhhhcccc-cceee
Confidence            6899998 888863 344434 347899999864   4444 4455677753  1222222     23333332 49999


Q ss_pred             EeCCCCcc-HHHHHHhcccCCEEEEEe
Q 017064          266 FNCVGGNS-ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       266 id~~g~~~-~~~~~~~l~~~G~~v~~g  291 (378)
                      +-|+.... ...+..++..|= =|++.
T Consensus       105 ~I~tp~~~H~~~~~~al~~gk-~v~~E  130 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAGK-HVMCE  130 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred             eeccchhhhhhHHHHhhhcch-hhhcC
Confidence            98888754 567778887654 45565

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.33  E-value=0.98  Score=32.81  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=32.4

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      .+.++++|+|.|+ |.+|.-++..++..|.+|.++.+.
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~   67 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTA   67 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeec
Confidence            4567899999999 999999999999999999888754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=83.32  E-value=0.42  Score=38.83  Aligned_cols=89  Identities=16%  Similarity=0.135  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCc-EEEccCcccHHHHHHHhcCCCC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~-~vi~~~~~~~~~i~~~~~~~g~  261 (378)
                      .++++||=.|+  |.|..+..+++ .|.+++++.    .+++-.+.++    ..|.. .++..+      +..+... +.
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD----~S~~ml~~A~~~~~~~~~~v~~~~~d------~~~~~~~-~~  101 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVD----LSQEMLSEAENKFRSQGLKPRLACQD------ISNLNIN-RK  101 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEEC----SCHHHHHHHHHHHHHTTCCCEEECCC------GGGCCCS-CC
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeec----cchhhhhhccccccccCccceeeccc------hhhhccc-cc
Confidence            44579999998  35677777776 478888776    4665555543    34432 222222      1111112 25


Q ss_pred             CcEEEeCCCC-c----------cHHHHHHhcccCCEEEE
Q 017064          262 PALGFNCVGG-N----------SASKVLKFLSQGGTMVT  289 (378)
Q Consensus       262 ~Dvvid~~g~-~----------~~~~~~~~l~~~G~~v~  289 (378)
                      ||+|+...+. .          .++.+.++|+|||.++.
T Consensus       102 fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         102 FDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9999964332 0          23677889999999875

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=82.99  E-value=0.74  Score=38.31  Aligned_cols=95  Identities=15%  Similarity=0.160  Sum_probs=60.7

Q ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcC
Q 017064          185 TLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       185 ~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      ++.++.+||=.|+  +.|..+..+++..  +.+|+++.    .+++..+.++    ..+.+..+...+  ...+ . ..+
T Consensus        24 ~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD----~s~~~l~~a~~~~~~~~~~~~f~~~d--~~~~-~-~~~   93 (281)
T d2gh1a1          24 KITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGID----SGETLLAEARELFRLLPYDSEFLEGD--ATEI-E-LND   93 (281)
T ss_dssp             CCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEE----CCHHHHHHHHHHHHSSSSEEEEEESC--TTTC-C-CSS
T ss_pred             ccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEe----cchhHhhhhhcccccccccccccccc--cccc-c-ccC
Confidence            5677889998887  4688888888865  46788776    4665555543    455443222111  1111 0 122


Q ss_pred             CCCCcEEEeCCCCc-------cHHHHHHhcccCCEEEEEe
Q 017064          259 LPEPALGFNCVGGN-------SASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       259 ~g~~Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g  291 (378)
                        ++|+|+....-.       .++++.+.|+|||.++...
T Consensus        94 --~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 --KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             --CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence              499999665421       2478899999999998765

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.83  E-value=3.7  Score=33.90  Aligned_cols=102  Identities=16%  Similarity=0.166  Sum_probs=55.2

Q ss_pred             hccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHhcCCCC
Q 017064          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLANLPE  261 (378)
Q Consensus       184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~~~~g~  261 (378)
                      ....+|++||=.-| ++=|-.+ ++|... +.++++..........-.+.++++|...+. ...+....  ... .. +.
T Consensus        98 L~~~~g~~vLD~CA-aPGgKt~-~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~--~~~-~~-~~  171 (284)
T d1sqga2          98 LAPQNGEHILDLCA-APGGKTT-HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS--QWC-GE-QQ  171 (284)
T ss_dssp             HCCCTTCEEEEESC-TTCHHHH-HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH--HHH-TT-CC
T ss_pred             cCccccceeEeccC-ccccchh-hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccc--hhc-cc-cc
Confidence            56789999886655 4444433 444433 356666653322222223455678886433 22222211  111 12 24


Q ss_pred             CcEEE-e--CCCCcc--------------------------HHHHHHhcccCCEEEEEe
Q 017064          262 PALGF-N--CVGGNS--------------------------ASKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       262 ~Dvvi-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~g  291 (378)
                      ||.|+ |  |+|...                          +..+++.+++||++|+.-
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsT  230 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  230 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            88887 4  555321                          134677899999998875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.59  E-value=0.58  Score=33.51  Aligned_cols=35  Identities=17%  Similarity=0.214  Sum_probs=30.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +.+++++|.|+ |.+|.-+++.+..+|.+|..+.+.
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   64 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRG   64 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEecc
Confidence            34579999999 999999999999999999887743

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=82.47  E-value=2.5  Score=35.90  Aligned_cols=65  Identities=12%  Similarity=0.014  Sum_probs=44.9

Q ss_pred             HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (378)
Q Consensus       176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi  242 (378)
                      |++.+.+ +.-...+.++... +|+-|.+++.+|+..|.+.++++.....+.++...++.+|++-+.
T Consensus        65 a~~~i~~-a~~~g~~~iv~~S-sGN~g~a~a~~a~~~g~~~~i~~p~~~~~~~~~~~~~~~Ga~vi~  129 (351)
T d1v7ca_          65 MTLAVSK-AVEGGAQAVACAS-TGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQ  129 (351)
T ss_dssp             HHHHHHH-HHHTTCSEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHH-HHhcCCCeeeeec-cccHHHHHHHHHhhhcccceeecCCchHHHHHHHhhhcCCCceEe
Confidence            3444433 3223455655554 599999999999999998777765544456677778899998765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.36  E-value=0.83  Score=32.19  Aligned_cols=32  Identities=16%  Similarity=0.125  Sum_probs=28.9

Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      +++++|.|+ |.+|.-+++.++.+|.+|.++.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~   52 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEA   52 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEee
Confidence            479999999 99999999999999999988764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.20  E-value=3  Score=30.73  Aligned_cols=45  Identities=9%  Similarity=0.087  Sum_probs=35.5

Q ss_pred             HHHHHHHHHhccCCCCEEEEe--CCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          175 TALRMLEDFTTLNSGDSIVQN--GATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       175 ta~~~l~~~~~~~~g~~VlV~--g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      |....+.  ....+++.|+|.  |+ |-+|.-+++.+..+|.+|..+.+.
T Consensus        27 t~~d~l~--~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~   73 (156)
T d1djqa2          27 TPEQVMD--GKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGV   73 (156)
T ss_dssp             CHHHHHH--TCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CHHHHhc--CccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecC
Confidence            4444443  567788888887  55 789999999999999999999854

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.84  E-value=1  Score=32.41  Aligned_cols=35  Identities=11%  Similarity=0.042  Sum_probs=30.7

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~  222 (378)
                      +..++++|.|+ |.+|.=.++..+.+|.+|.++.+.
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence            34589999999 999999999999999999988753

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=81.82  E-value=0.84  Score=38.26  Aligned_cols=31  Identities=19%  Similarity=0.315  Sum_probs=27.2

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064          190 DSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~  220 (378)
                      ++|||+|++|-+|...+..+...|..++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~   33 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLR   33 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEec
Confidence            4799999999999999999988898887654

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=81.50  E-value=3.4  Score=32.25  Aligned_cols=91  Identities=18%  Similarity=0.147  Sum_probs=55.3

Q ss_pred             CEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHH----HHHhCCCcEE--EccCcccHHHHHHHhcCCCCC
Q 017064          190 DSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKE----KLKGLGADEV--FTESQLEVKNVKGLLANLPEP  262 (378)
Q Consensus       190 ~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~----~~~~~ga~~v--i~~~~~~~~~i~~~~~~~g~~  262 (378)
                      .-||=.|+  |.|..++.+|+.. ...++++.    .+.....    .+++.|.+.+  +..+   ...+....... .+
T Consensus        31 PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD----~~~~~i~~a~~~~~~~~l~Nv~~~~~D---a~~l~~~~~~~-~~  100 (204)
T d2fcaa1          31 PIHIEVGT--GKGQFISGMAKQNPDINYIGIE----LFKSVIVTAVQKVKDSEAQNVKLLNID---ADTLTDVFEPG-EV  100 (204)
T ss_dssp             CEEEEECC--TTSHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHSCCSSEEEECCC---GGGHHHHCCTT-SC
T ss_pred             ceEEEEEe--cCcHHHHHHHHhCCCCcEEEee----cchHHHHHHHHHHHHHhccCchhcccc---hhhhhcccCch-hh
Confidence            35566665  7788899999876 56777665    2444433    3456676533  2222   22333333332 48


Q ss_pred             cEEEeCCCCc---------------cHHHHHHhcccCCEEEEE
Q 017064          263 ALGFNCVGGN---------------SASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       263 Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~  290 (378)
                      |.|+-....+               .+....+.|+|||.+...
T Consensus       101 d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         101 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             hccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            8887555432               236678999999998765

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

Probab=81.26  E-value=13  Score=30.49  Aligned_cols=105  Identities=21%  Similarity=0.231  Sum_probs=70.1

Q ss_pred             hccCCCC-EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc----------------
Q 017064          184 TTLNSGD-SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----------------  246 (378)
Q Consensus       184 ~~~~~g~-~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~----------------  246 (378)
                      +.+++++ ..+|...+|..|.+++..++.+|.+.++++... .++.+...++.+|+..+.....                
T Consensus        55 g~~~~~~~~~vv~~SsGN~g~a~A~~a~~~g~~~~iv~p~~-~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1ve1a1          55 GILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQ-MSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE  133 (302)
T ss_dssp             TSCCTTSCCEEEESCCSHHHHHHHHHHHHHTCEEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcEEEEecCCcchhhhhhhhhccCcceeEeeecc-cchheeehhhhhhhcchhcccccchHHHHHHhhhhhhc
Confidence            4445442 455555669999999999999999988877554 4667777778888766542211                


Q ss_pred             ------------ccH--------HHHHHHhcCCCCCcEEEeCCCCccH----HHHHHhcccCCEEEEEe
Q 017064          247 ------------LEV--------KNVKGLLANLPEPALGFNCVGGNSA----SKVLKFLSQGGTMVTYG  291 (378)
Q Consensus       247 ------------~~~--------~~i~~~~~~~g~~Dvvid~~g~~~~----~~~~~~l~~~G~~v~~g  291 (378)
                                  .++        .++.+..++  .+|.+|-++|+--.    ...+..+.+.-+++-+.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~t~~~EI~~q~~~--~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~iigve  200 (302)
T d1ve1a1         134 LGAFMPDQFKNPANVRAHYETTGPELYEALEG--RIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVE  200 (302)
T ss_dssp             HTCBCCCTTTCHHHHHHHHHTHHHHHHHHTTT--CCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             cCccccccCccchhHHHHHHHHHHHHHHHcCC--CCCeEEEeecCcHHHHHHHHHHHhcCCCCEEEEEE
Confidence                        000        123333443  49999999987432    45677788888988776

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=81.15  E-value=1.8  Score=32.81  Aligned_cols=82  Identities=16%  Similarity=0.213  Sum_probs=53.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~  269 (378)
                      +|.|+|+ |.+|...+..++.. +++++++++.....         .....+..+.+     ...+..   .+|+|+.|+
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~---------~~~~~~~~~~~-----~~~~~~---~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL---------DTKTPVFDVAD-----VDKHAD---DVDVLFLCM   66 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC---------SSSSCEEEGGG-----GGGTTT---TCSEEEECS
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc---------ccccccccchh-----hhhhcc---ccceEEEeC
Confidence            5899998 99999888777754 67888888643211         11111111111     112222   499999999


Q ss_pred             CCcc-HHHHHHhcccCCEEEEE
Q 017064          270 GGNS-ASKVLKFLSQGGTMVTY  290 (378)
Q Consensus       270 g~~~-~~~~~~~l~~~G~~v~~  290 (378)
                      +... .+.+..+|..|-.+|.+
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            8754 57888999999987754

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.00  E-value=5.6  Score=31.14  Aligned_cols=113  Identities=11%  Similarity=0.061  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCCchH---HHHHHHHHHHcCCcEEEEecCCCCcHH---HHHHHHhCCCcEEEccCc
Q 017064          173 PLTALRMLEDFTTLNSGDSIVQNGATSIV---GQCIIQIARHRGIHSINIIRDRAGSDE---AKEKLKGLGADEVFTESQ  246 (378)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~---G~~av~la~~~g~~vi~~~~~~~~~~~---~~~~~~~~ga~~vi~~~~  246 (378)
                      +..++..+.+...-....+|+|+-+.|.=   |+.++..++..|++|.++...+..+++   ..+..++++...+-....
T Consensus        24 g~~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (211)
T d2ax3a2          24 GISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVVEQFEP  103 (211)
T ss_dssp             HHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEESCCCG
T ss_pred             HHHHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCcccccccc
Confidence            44455555554432335677777555654   577777777789998877654333333   233445566554321111


Q ss_pred             ccHHHHHHHhcCCCCCcEEEeCCCC--------ccHHHHHHhcccCCE-EEEEecCCC
Q 017064          247 LEVKNVKGLLANLPEPALGFNCVGG--------NSASKVLKFLSQGGT-MVTYGGMSK  295 (378)
Q Consensus       247 ~~~~~i~~~~~~~g~~Dvvid~~g~--------~~~~~~~~~l~~~G~-~v~~g~~~~  295 (378)
                      .       ...   .+|++||+.=+        ..+...++.+...+. ++.+-.+++
T Consensus       104 ~-------~~~---~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         104 S-------ILN---EFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             G-------GGG---GCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             c-------ccc---CceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence            1       111   38999998832        123566666665554 555543443

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.79  E-value=2.8  Score=35.14  Aligned_cols=52  Identities=17%  Similarity=0.164  Sum_probs=42.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~  243 (378)
                      .-+|...+|..|.+.+..|+.+|.+.++++... .+.+|.+.++.+|++.++.
T Consensus        55 ~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~-~~~~k~~~~~~~Ga~v~~~  106 (319)
T d1p5ja_          55 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGT-TPALTIERLKNEGATCKVV  106 (319)
T ss_dssp             CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTT-CCHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHhhhccccceeccccc-cccccccccccceeccccc
Confidence            345666679999999999999999999887554 5778888999999977653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.75  E-value=0.67  Score=38.38  Aligned_cols=30  Identities=23%  Similarity=0.315  Sum_probs=27.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (378)
Q Consensus       191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~  221 (378)
                      .|+|.|| |+.|++++..++..|.+|+++.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            4899999 99999999999999999998864

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.74  E-value=1.5  Score=36.57  Aligned_cols=97  Identities=15%  Similarity=0.133  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC---------C-cEEEccCcccHHHHHHHh
Q 017064          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---------A-DEVFTESQLEVKNVKGLL  256 (378)
Q Consensus       187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---------a-~~vi~~~~~~~~~i~~~~  256 (378)
                      ...++|||.|+  |-|..+-.++++.+.+.+..++.   +++=.+.++++-         . -.++..+.  .+.++...
T Consensus        79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEi---D~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da--~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEI---DKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG--VAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEES---CHHHHHHHHHHCHHHHGGGGSTTEEEEESCH--HHHHHTSC
T ss_pred             CCCcceEEecC--CchHHHHHHHhcccceeeEEecC---CHHHHHHHHHhchhhhccccCCCcEEEEccH--HHHHhhcc
Confidence            34579999996  44556667888878765555543   455555555421         0 11111111  12233322


Q ss_pred             cCCCCCcEEE-eCCCC---c-------cHHHHHHhcccCCEEEEEec
Q 017064          257 ANLPEPALGF-NCVGG---N-------SASKVLKFLSQGGTMVTYGG  292 (378)
Q Consensus       257 ~~~g~~Dvvi-d~~g~---~-------~~~~~~~~l~~~G~~v~~g~  292 (378)
                      .+  ++|+|| |+...   +       -++.+.++|+++|.++.-..
T Consensus       152 ~~--~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         152 EG--SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             TT--CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cc--CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            22  599887 44331   1       13678899999999987653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=80.09  E-value=2.6  Score=30.99  Aligned_cols=73  Identities=8%  Similarity=0.155  Sum_probs=51.9

Q ss_pred             HHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC
Q 017064          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN  258 (378)
Q Consensus       182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~  258 (378)
                      +.+++..-+.+++.-..-..-..++..+|.++  .++++.+    .+++..+.++++|++.++++.......+.+...+
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~----~~~~~~~~l~~~Gad~vi~p~~~~~~~l~~~l~~  139 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAV----SDSKNLNKIKMVHPDIILSPQLFGSEILARVLNG  139 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC----SSGGGHHHHHTTCCSEEECHHHHHHHHHHHHHTT
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEE----cCHHHHHHHHHCCCCEEECHHHHHHHHHHHHhCc
Confidence            34788888888887766677788888888764  3676666    4677778889999999997755433444444433