Citrus Sinensis ID: 017117

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTDTSTGLSRSMAMTMR
ccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHcccc
cHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHcccccccccccEEEEccccHHccccccccccccccHHHcHEEEEEccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHcccccccccHHHHHHcc
MLVFFFCclnfsegltgitLCATMkvfmpnqdncdRISQllgscepaksWQMLYLYTVLYITgfgaagirpcvssfgadqfdersKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMlffigtplyrhrlpggsplTRVAQVLVAAFRKRHaafssseliglyevpgkhsaikgsgkiahtddfRCLDKAALELkedvinpspwklctvTQVEEVKTLVrlvpipacTIMLNVILTEFLTLSVQQAYTmnthmghprgasqlQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSvtgnpkkgqpnwlaqnintdtstglsrsMAMTMR
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELkedvinpspwklctvtQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTgnpkkgqpnwlaqnintdtstglsrsmamtmr
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIgsayaalagglgcfaasILNSIIKSVTGNPKKGQPNWLAQNINTDTSTGLSRSMAMTMR
*LVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVT********************************
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDN**************KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS*D**THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELI********************TDDFRCLDKAALEL*********WKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTDTSTGLSRSMAMT**
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTDTSTGLSRSMAMTMR
MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA********************
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
iiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVSILSVIWAGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTDTSTGLSRSMAMTMR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query377 2.2.26 [Sep-21-2011]
Q9LYR6624 Probable peptide/nitrate yes no 0.920 0.556 0.647 1e-154
Q9M390570 Peptide transporter PTR1 no no 0.901 0.596 0.352 6e-69
Q93Z20590 Probable peptide/nitrate no no 0.901 0.576 0.360 3e-64
P46032585 Peptide transporter PTR2 no no 0.899 0.579 0.347 9e-64
Q9LFB8570 Peptide transporter PTR5 no no 0.891 0.589 0.343 4e-61
Q9FNL7582 Peptide transporter PTR3- no no 0.923 0.597 0.285 2e-49
Q84WG0545 Probable peptide/nitrate no no 0.771 0.533 0.320 2e-49
Q9FNL8586 Peptide transporter PTR3- no no 0.824 0.530 0.289 1e-46
Q9SZY4577 Nitrate transporter 1.4 O no no 0.822 0.537 0.329 9e-46
Q9SX20596 Probable nitrite transpor no no 0.915 0.578 0.297 4e-45
>sp|Q9LYR6|PTR49_ARATH Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1 Back     alignment and function desciption
 Score =  544 bits (1401), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 281/434 (64%), Positives = 316/434 (72%), Gaps = 87/434 (20%)

Query: 14  GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 73
           GL GITL A++K+F+P+Q NC ++S LLG+CE AKSWQMLYLYTVLYITGFGAAGIRPCV
Sbjct: 149 GLIGITLGASLKMFVPDQSNCGQLSLLLGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCV 208

Query: 74  SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 133
           SSFGADQFDE+SKDYKTHLDRFFNFFYLSVT+GAI+AFTLVVY+QME GWG AFG LA+A
Sbjct: 209 SSFGADQFDEKSKDYKTHLDRFFNFFYLSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVA 268

Query: 134 MGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSA 193
           MGISN LFF GTPLYRHRLPGGSPLTRVAQVLVAAFRKR+AAF+SSE IGLYEVPG  SA
Sbjct: 269 MGISNALFFAGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSA 328

Query: 194 IKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIML 253
           I GS KI H++DF  LDKAALELKED + PSPWKLCTVTQVEEVK L+RL+PIP CTIML
Sbjct: 329 INGSRKIPHSNDFIWLDKAALELKEDGLEPSPWKLCTVTQVEEVKILIRLIPIPTCTIML 388

Query: 254 NVILTEFLTLSVQQAYTMNTHM-------------------------------------G 276
           +++LTE+LTLSVQQAYT+NTH+                                     G
Sbjct: 389 SLVLTEYLTLSVQQAYTLNTHIQHLKLPVTCMPVFPGLSIFLILSLYYSVFVPITRRITG 448

Query: 277 HPRGASQLQRVGIGLAVSILSVIWA----------------------------------- 301
           +P GASQLQRVGIGLAVSI+SV WA                                   
Sbjct: 449 NPHGASQLQRVGIGLAVSIISVAWAGLFENYRRHYAIQNGFEFNFLTQMPDLTAYWLLIQ 508

Query: 302 -------------GLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNP 348
                        GLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAA+ILN+I+K+ T + 
Sbjct: 509 YCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAATILNNIVKAATRDS 568

Query: 349 KKGQPNWLAQNINT 362
                +WL+QNINT
Sbjct: 569 DG--KSWLSQNINT 580

Arabidopsis thaliana (taxid: 3702)
>sp|Q9M390|PTR1_ARATH Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1 Back     alignment and function description
>sp|Q93Z20|PTR17_ARATH Probable peptide/nitrate transporter At1g62200 OS=Arabidopsis thaliana GN=At1g62200 PE=2 SV=1 Back     alignment and function description
>sp|P46032|PTR2_ARATH Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFB8|PTR5_ARATH Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1 Back     alignment and function description
>sp|Q9FNL7|PTR3_ARATH Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1 Back     alignment and function description
>sp|Q84WG0|PTR26_ARATH Probable peptide/nitrate transporter At2g02020 OS=Arabidopsis thaliana GN=At2g02020 PE=2 SV=2 Back     alignment and function description
>sp|Q9FNL8|PTR4_ARATH Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1 Back     alignment and function description
>sp|Q9SZY4|PTR27_ARATH Nitrate transporter 1.4 OS=Arabidopsis thaliana GN=NRT1.4 PE=1 SV=1 Back     alignment and function description
>sp|Q9SX20|PTR18_ARATH Probable nitrite transporter At1g68570 OS=Arabidopsis thaliana GN=At1g68570 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
224053581 638 predicted protein [Populus trichocarpa] 0.925 0.547 0.702 1e-171
296085541 606 unnamed protein product [Vitis vinifera] 0.925 0.575 0.73 1e-168
449468910 637 PREDICTED: probable peptide/nitrate tran 0.925 0.547 0.672 1e-164
225425292 640 PREDICTED: probable peptide/nitrate tran 0.925 0.545 0.672 1e-164
147866216 626 hypothetical protein VITISV_008303 [Viti 0.925 0.557 0.672 1e-164
356569101 631 PREDICTED: probable peptide/nitrate tran 0.925 0.553 0.675 1e-163
357501519 638 Peptide transporter-like protein [Medica 0.925 0.547 0.656 1e-160
147771745 612 hypothetical protein VITISV_040927 [Viti 0.899 0.553 0.649 1e-155
297811451 625 proton-dependent oligopeptide transport 0.941 0.568 0.640 1e-153
15240621 624 putative peptide/nitrate transporter [Ar 0.920 0.556 0.647 1e-152
>gi|224053581|ref|XP_002297883.1| predicted protein [Populus trichocarpa] gi|222845141|gb|EEE82688.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 305/434 (70%), Positives = 334/434 (76%), Gaps = 85/434 (19%)

Query: 14  GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 73
           GLTGITLCATM +FMP+Q  CD++S LLG+CEPAKSWQMLYL TVLY+TGFGAAGIRPCV
Sbjct: 153 GLTGITLCATMNIFMPDQGQCDQLSLLLGNCEPAKSWQMLYLNTVLYVTGFGAAGIRPCV 212

Query: 74  SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 133
           SSFGADQFDER ++YK+HLDRFFNFFYLSVT+GAIVAFTLVVYIQM+HGWGSAFG+LAIA
Sbjct: 213 SSFGADQFDERGENYKSHLDRFFNFFYLSVTIGAIVAFTLVVYIQMKHGWGSAFGSLAIA 272

Query: 134 MGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSA 193
           MG+SNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAF+KR A+FSSSELIGLYEVPGK SA
Sbjct: 273 MGMSNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFQKRKASFSSSELIGLYEVPGKRSA 332

Query: 194 IKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIML 253
           IKGSGKIAHTDDFRCLDKAAL+LKED ++PSPW+LCTVTQVEEVK L++LVPIPACTIML
Sbjct: 333 IKGSGKIAHTDDFRCLDKAALQLKEDGVDPSPWRLCTVTQVEEVKILIKLVPIPACTIML 392

Query: 254 NVILTEFLTLSVQQAYTMNTHM-------------------------------------G 276
           N+ILTE+LTLSVQQAYT+NTH+                                     G
Sbjct: 393 NLILTEYLTLSVQQAYTLNTHLGHLKLPVTSMPVFPCLSIFLILSLYYSVFVPIFRRITG 452

Query: 277 HPRGASQLQRVGIGLAVSILSVIWA----------------------------------- 301
           HPRGASQLQRVGIGLA SILSV WA                                   
Sbjct: 453 HPRGASQLQRVGIGLAFSILSVAWAAIFERYRRKYAIEHGYEFSFLTPMPNLSAYWLLIQ 512

Query: 302 -------------GLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNP 348
                        GLLEFLYEEAPDAMKSIGSAYAALAGG+GCFAASILNSI+KSVTGNP
Sbjct: 513 YCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGIGCFAASILNSIVKSVTGNP 572

Query: 349 KKGQPNWLAQNINT 362
            K Q +WL+QNINT
Sbjct: 573 DKRQQSWLSQNINT 586

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296085541|emb|CBI29273.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449468910|ref|XP_004152164.1| PREDICTED: probable peptide/nitrate transporter At5g13400-like [Cucumis sativus] gi|449528581|ref|XP_004171282.1| PREDICTED: probable peptide/nitrate transporter At5g13400-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225425292|ref|XP_002272176.1| PREDICTED: probable peptide/nitrate transporter At5g13400 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147866216|emb|CAN84143.1| hypothetical protein VITISV_008303 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356569101|ref|XP_003552744.1| PREDICTED: probable peptide/nitrate transporter At5g13400-like [Glycine max] Back     alignment and taxonomy information
>gi|357501519|ref|XP_003621048.1| Peptide transporter-like protein [Medicago truncatula] gi|355496063|gb|AES77266.1| Peptide transporter-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|147771745|emb|CAN78165.1| hypothetical protein VITISV_040927 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297811451|ref|XP_002873609.1| proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] gi|297319446|gb|EFH49868.1| proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15240621|ref|NP_196844.1| putative peptide/nitrate transporter [Arabidopsis thaliana] gi|75335666|sp|Q9LYR6.1|PTR49_ARATH RecName: Full=Probable peptide/nitrate transporter At5g13400 gi|7543907|emb|CAB87147.1| peptide transporter-like protein [Arabidopsis thaliana] gi|18252225|gb|AAL61945.1| peptide transporter-like protein [Arabidopsis thaliana] gi|22136152|gb|AAM91154.1| peptide transporter-like protein [Arabidopsis thaliana] gi|332004507|gb|AED91890.1| putative peptide/nitrate transporter [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
TAIR|locus:2181655 624 AT5G13400 [Arabidopsis thalian 0.763 0.461 0.761 1.6e-128
TAIR|locus:2080235 570 PTR1 "peptide transporter 1" [ 0.681 0.450 0.431 2e-70
TAIR|locus:2041125 585 PTR2 "peptide transporter 2" [ 0.742 0.478 0.410 5e-66
TAIR|locus:2018032590 PTR6 "peptide transporter 6" [ 0.671 0.428 0.463 3.8e-60
TAIR|locus:2150124 570 PTR5 "peptide transporter 5" [ 0.689 0.456 0.406 1.6e-55
TAIR|locus:2025886 591 AT1G59740 [Arabidopsis thalian 0.615 0.392 0.375 1.1e-48
TAIR|locus:2043803 577 AT2G26690 [Arabidopsis thalian 0.602 0.393 0.402 2.9e-48
TAIR|locus:2026884 596 AT1G68570 [Arabidopsis thalian 0.697 0.441 0.379 3.3e-47
TAIR|locus:2161438 582 PTR3 "peptide transporter 3" [ 0.694 0.450 0.335 4.2e-47
TAIR|locus:2205769 567 AT1G27040 [Arabidopsis thalian 0.657 0.437 0.359 9.6e-47
TAIR|locus:2181655 AT5G13400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1140 (406.4 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
 Identities = 220/289 (76%), Positives = 252/289 (87%)

Query:    14 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 73
             GL GITL A++K+F+P+Q NC ++S LLG+CE AKSWQMLYLYTVLYITGFGAAGIRPCV
Sbjct:   149 GLIGITLGASLKMFVPDQSNCGQLSLLLGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCV 208

Query:    74 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 133
             SSFGADQFDE+SKDYKTHLDRFFNFFYLSVT+GAI+AFTLVVY+QME GWG AFG LA+A
Sbjct:   209 SSFGADQFDEKSKDYKTHLDRFFNFFYLSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVA 268

Query:   134 MGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSA 193
             MGISN LFF GTPLYRHRLPGGSPLTRVAQVLVAAFRKR+AAF+SSE IGLYEVPG  SA
Sbjct:   269 MGISNALFFAGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSA 328

Query:   194 IKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIML 253
             I GS KI H++DF  LDKAALELKED + PSPWKLCTVTQVEEVK L+RL+PIP CTIML
Sbjct:   329 INGSRKIPHSNDFIWLDKAALELKEDGLEPSPWKLCTVTQVEEVKILIRLIPIPTCTIML 388

Query:   254 NVILTEFLTLSVQQAYTMNTHMGHPRGASQLQRVGIGLAVS-ILSVIWA 301
             +++LTE+LTLSVQQAYT+NTH+ H +       V  GL++  ILS+ ++
Sbjct:   389 SLVLTEYLTLSVQQAYTLNTHIQHLKLPVTCMPVFPGLSIFLILSLYYS 437
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006857 "oligopeptide transport" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2080235 PTR1 "peptide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041125 PTR2 "peptide transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018032 PTR6 "peptide transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150124 PTR5 "peptide transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025886 AT1G59740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043803 AT2G26690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026884 AT1G68570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161438 PTR3 "peptide transporter 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205769 AT1G27040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
pfam00854372 pfam00854, PTR2, POT family 9e-43
TIGR00926 641 TIGR00926, 2A1704, Peptide:H+ symporter (also tran 3e-11
COG3104498 COG3104, PTR2, Dipeptide/tripeptide permease [Amin 7e-09
TIGR00924475 TIGR00924, yjdL_sub1_fam, amino acid/peptide trans 8e-05
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 0.002
>gnl|CDD|216153 pfam00854, PTR2, POT family Back     alignment and domain information 
 Score =  152 bits (386), Expect = 9e-43
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 20/263 (7%)

Query: 51  QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 110
           Q+   Y  LY+   G  GI+P VS+FGADQFDE     +   D FF++FY S+  G+++A
Sbjct: 31  QVALFYIGLYLIALGTGGIKPNVSAFGADQFDETQDPRR---DGFFSWFYFSINAGSLIA 87

Query: 111 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP-GGSPLTR-VAQVLVAA 168
             +  Y+Q   G+   FG  A+ M ++ ++F +G+  Y+ + P GGSP T  +A ++ AA
Sbjct: 88  TIITPYLQQNVGYPLGFGLPAVGMLLALLVFLLGSRRYKKKAPPGGSPFTVCIAFIITAA 147

Query: 169 FRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKL 228
            + R           LY    K++    S    HT        A + +            
Sbjct: 148 GKNRKLQLPKDS-HWLYWALEKYNKRSISQTKVHT------RVAVIFIPLPKFWA---LF 197

Query: 229 CTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMG--HPRGASQLQ- 285
                V  ++ ++ ++PI A  I+ + + T+  TL V+Q  TM+  +        +  Q 
Sbjct: 198 DQQGSVWLLQAILLMLPIWAFWILPDQMWTQLATLIVRQVPTMDRIIYPLFEIPPASFQS 257

Query: 286 --RVGIGLAVSILSVIWAGLLEF 306
              + + + + IL  +   LL  
Sbjct: 258 FNPLAVLILLPILDFLVYPLLRL 280

The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters. Length = 372
>gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>gnl|CDD|225646 COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233189 TIGR00924, yjdL_sub1_fam, amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 377
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 100.0
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 100.0
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 100.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 100.0
PRK15462493 dipeptide/tripeptide permease D; Provisional 100.0
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.97
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.96
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.95
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.88
TIGR00893399 2A0114 d-galactonate transporter. 98.61
TIGR00900365 2A0121 H+ Antiporter protein. 98.59
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.44
TIGR00895398 2A0115 benzoate transport. 98.42
PRK11646400 multidrug resistance protein MdtH; Provisional 98.41
PRK10489417 enterobactin exporter EntS; Provisional 98.29
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 98.27
PRK10054395 putative transporter; Provisional 98.26
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.24
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.23
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.22
PRK03545390 putative arabinose transporter; Provisional 98.2
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.16
PRK09874408 drug efflux system protein MdtG; Provisional 98.06
PRK12307426 putative sialic acid transporter; Provisional 98.03
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.02
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.02
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.0
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 97.99
PRK10504471 putative transporter; Provisional 97.99
PRK05122399 major facilitator superfamily transporter; Provisi 97.99
KOG1330493 consensus Sugar transporter/spinster transmembrane 97.96
TIGR00891405 2A0112 putative sialic acid transporter. 97.95
PRK10213394 nepI ribonucleoside transporter; Reviewed 97.89
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 97.88
TIGR00901356 2A0125 AmpG-related permease. 97.87
PRK12382392 putative transporter; Provisional 97.85
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 97.83
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 97.82
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 97.82
PRK11663434 regulatory protein UhpC; Provisional 97.82
TIGR00892455 2A0113 monocarboxylate transporter 1. 97.82
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 97.81
PRK10473392 multidrug efflux system protein MdtL; Provisional 97.81
TIGR00898505 2A0119 cation transport protein. 97.8
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 97.79
TIGR00902382 2A0127 phenyl proprionate permease family protein. 97.72
PRK09705393 cynX putative cyanate transporter; Provisional 97.71
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 97.71
PRK10091382 MFS transport protein AraJ; Provisional 97.69
PRK11652394 emrD multidrug resistance protein D; Provisional 97.68
PRK05122399 major facilitator superfamily transporter; Provisi 97.67
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 97.67
PRK15011393 sugar efflux transporter B; Provisional 97.64
PRK10077479 xylE D-xylose transporter XylE; Provisional 97.62
PRK11043401 putative transporter; Provisional 97.6
TIGR00880141 2_A_01_02 Multidrug resistance protein. 97.56
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 97.56
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 97.54
PRK15403413 multidrug efflux system protein MdtM; Provisional 97.51
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 97.5
TIGR00788468 fbt folate/biopterin transporter. The only functio 97.49
TIGR00805 633 oat sodium-independent organic anion transporter. 97.42
PRK11902402 ampG muropeptide transporter; Reviewed 97.41
TIGR00896355 CynX cyanate transporter. This family of proteins 97.38
PRK11195393 lysophospholipid transporter LplT; Provisional 97.37
PRK03633381 putative MFS family transporter protein; Provision 97.35
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 97.32
PRK12382392 putative transporter; Provisional 97.3
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 97.27
PRK11010491 ampG muropeptide transporter; Validated 97.23
PRK09874408 drug efflux system protein MdtG; Provisional 97.15
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 97.02
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 97.01
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 96.97
TIGR00889418 2A0110 nucleoside transporter. This family of prot 96.96
PRK03893496 putative sialic acid transporter; Provisional 96.95
TIGR00897402 2A0118 polyol permease family. This family of prot 96.93
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 96.89
PRK03699394 putative transporter; Provisional 96.81
KOG2532466 consensus Permease of the major facilitator superf 96.79
PRK10489417 enterobactin exporter EntS; Provisional 96.75
KOG3764464 consensus Vesicular amine transporter [Intracellul 96.73
PRK10406432 alpha-ketoglutarate transporter; Provisional 96.72
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 96.66
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 96.59
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 96.46
TIGR00893399 2A0114 d-galactonate transporter. 96.37
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 96.36
PRK03633381 putative MFS family transporter protein; Provision 96.33
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 96.27
PF13347428 MFS_2: MFS/sugar transport protein 96.25
PRK09528420 lacY galactoside permease; Reviewed 96.23
TIGR00892455 2A0113 monocarboxylate transporter 1. 96.21
PRK10642490 proline/glycine betaine transporter; Provisional 96.17
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 96.08
PRK09705393 cynX putative cyanate transporter; Provisional 96.03
PRK10133438 L-fucose transporter; Provisional 96.02
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 96.02
PRK09528420 lacY galactoside permease; Reviewed 95.97
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 95.95
PRK03545390 putative arabinose transporter; Provisional 95.81
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 95.76
TIGR01272310 gluP glucose/galactose transporter. Disruption of 95.67
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 95.64
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 95.6
PRK09669444 putative symporter YagG; Provisional 95.59
PRK15075434 citrate-proton symporter; Provisional 95.31
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.27
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 95.2
PRK09952438 shikimate transporter; Provisional 95.17
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 95.14
PRK10054395 putative transporter; Provisional 95.08
PRK09848448 glucuronide transporter; Provisional 95.07
PRK03699394 putative transporter; Provisional 95.02
PLN00028476 nitrate transmembrane transporter; Provisional 94.88
PRK10077479 xylE D-xylose transporter XylE; Provisional 94.83
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 94.81
PRK15011393 sugar efflux transporter B; Provisional 94.72
PRK11646400 multidrug resistance protein MdtH; Provisional 94.69
PRK09669444 putative symporter YagG; Provisional 94.58
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 94.57
PRK03893496 putative sialic acid transporter; Provisional 94.49
PRK09848448 glucuronide transporter; Provisional 94.4
PRK11010491 ampG muropeptide transporter; Validated 94.26
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 94.25
TIGR00902382 2A0127 phenyl proprionate permease family protein. 94.0
TIGR00891405 2A0112 putative sialic acid transporter. 93.99
PRK11462460 putative transporter; Provisional 93.81
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 93.66
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 93.51
COG0738422 FucP Fucose permease [Carbohydrate transport and m 93.1
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 93.06
PRK10213394 nepI ribonucleoside transporter; Reviewed 92.98
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 92.93
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 92.91
PRK09952438 shikimate transporter; Provisional 92.85
PRK15402406 multidrug efflux system translocase MdfA; Provisio 92.81
PRK11663434 regulatory protein UhpC; Provisional 92.52
KOG0254513 consensus Predicted transporter (major facilitator 92.47
PF13347428 MFS_2: MFS/sugar transport protein 92.24
PRK09584500 tppB putative tripeptide transporter permease; Rev 92.11
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 92.05
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 92.03
KOG3626 735 consensus Organic anion transporter [Secondary met 91.68
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 91.51
PRK10091382 MFS transport protein AraJ; Provisional 91.35
PRK10429473 melibiose:sodium symporter; Provisional 91.18
PRK10642490 proline/glycine betaine transporter; Provisional 91.14
TIGR01272310 gluP glucose/galactose transporter. Disruption of 91.1
PTZ00207 591 hypothetical protein; Provisional 90.64
PRK11902402 ampG muropeptide transporter; Reviewed 90.57
TIGR00897402 2A0118 polyol permease family. This family of prot 90.49
TIGR00900365 2A0121 H+ Antiporter protein. 90.47
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 90.45
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 90.35
COG2807395 CynX Cyanate permease [Inorganic ion transport and 90.31
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 90.12
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 90.03
TIGR00881379 2A0104 phosphoglycerate transporter family protein 89.84
PRK10504471 putative transporter; Provisional 89.31
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 89.06
TIGR00898505 2A0119 cation transport protein. 88.95
PRK10429473 melibiose:sodium symporter; Provisional 88.81
PRK12307426 putative sialic acid transporter; Provisional 88.77
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 88.77
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 88.44
KOG2533495 consensus Permease of the major facilitator superf 87.85
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 87.55
PRK10207489 dipeptide/tripeptide permease B; Provisional 87.36
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 87.34
PRK11652394 emrD multidrug resistance protein D; Provisional 87.23
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 86.22
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 86.11
TIGR00896355 CynX cyanate transporter. This family of proteins 85.02
PRK10133438 L-fucose transporter; Provisional 84.32
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 84.3
PLN00028476 nitrate transmembrane transporter; Provisional 83.87
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 83.65
PRK15075434 citrate-proton symporter; Provisional 82.93
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 82.74
TIGR00889418 2A0110 nucleoside transporter. This family of prot 82.33
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 81.78
PRK11043401 putative transporter; Provisional 81.16
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 80.54
PRK11462460 putative transporter; Provisional 80.05
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-69  Score=557.37  Aligned_cols=360  Identities=41%  Similarity=0.657  Sum_probs=323.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhccCccCCCCCCccccccccCCCCCCcchhHHHHHHHHHHHHHhcccccccchhhhhccC
Q 017117            2 LVFFFCCLNFSEGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF   81 (377)
Q Consensus         2 ~~i~~~~~v~~~G~~lL~~sa~~p~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~L~lia~G~G~~Kpnv~~~~~dqf   81 (377)
                      .||.+++++|++|+.+|++++.+|.++|+  +| ........|++++..|...||.+|+++++|+||+|||+.++++|||
T Consensus       105 ~tI~~~s~i~~~G~~~lt~~a~~~~l~p~--~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf  181 (571)
T KOG1237|consen  105 FTINIGSLISLLGLFGLTLSAMIPALLPF--MC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF  181 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCc--cc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence            48999999999999999999999999988  76 1111244799999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHhcccccccCCCCCCchhHH
Q 017117           82 DERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~s~F~~fY~~iNiGsl~a~~~~~yi~~~~g~~~gF~i~~i~m~~~l~~f~~g~~~y~~~~p~gs~l~~~  161 (377)
                      |+.+++++..+.++|||||+.+|+|++++.++.+|+|++.||.+||++|+++|++++++|+.|++.|++++|.|+|++++
T Consensus       182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i  261 (571)
T KOG1237|consen  182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRI  261 (571)
T ss_pred             CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHH
Confidence            99999988899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccccccCcccccccccCCCcccccCCcccccCCCcchhhHHHhhhcccc---CCCCCcccccchhhhHhh
Q 017117          162 AQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDV---INPSPWKLCTVTQVEEVK  238 (377)
Q Consensus       162 ~~vi~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~---~~~~~w~l~~~~~vee~k  238 (377)
                      .+|++++++|++...+.++++ + +.     .........+++.++++|+|+++...+.   ...+||++|+++||||+|
T Consensus       262 ~~Vlvaa~~k~~~~~~~~~~~-~-~~-----~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K  334 (571)
T KOG1237|consen  262 GQVLVAAAFKRKAVVSLDPEE-L-YY-----DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVK  334 (571)
T ss_pred             HHHHHHHHHHHhccCCCcchh-c-cc-----cccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhh
Confidence            999999999998877766433 2 11     1112223456788999999998754422   235899999999999999


Q ss_pred             HhhhhhhhhhhHHHHHHHHhhchhHHHHHHHHhhccc--------------------------------------CCCCC
Q 017117          239 TLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM--------------------------------------GHPRG  280 (377)
Q Consensus       239 ~~~~~l~l~~~~iif~~~~~Q~~t~~~~qa~~md~~~--------------------------------------~~~~~  280 (377)
                      +++|++|+|.+.++||+++.|+.|.++.||.+|||++                                      +++++
T Consensus       335 ~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~  414 (571)
T KOG1237|consen  335 AVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFG  414 (571)
T ss_pred             hhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCC
Confidence            9999999999999999999999999999999999987                                      33457


Q ss_pred             CCchhHHHHHHHHHHHHHHHH------------------------------------------HHHHHHhhccCchhhHH
Q 017117          281 ASQLQRVGIGLAVSILSVIWA------------------------------------------GLLEFLYEEAPDAMKSI  318 (377)
Q Consensus       281 ~s~l~ri~iG~~l~~la~~~a------------------------------------------~~~E~~~~~aP~~m~s~  318 (377)
                      ++++|||++|+++++++|+++                                          |++||+|+|||++|||+
T Consensus       415 ~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~  494 (571)
T KOG1237|consen  415 ITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSV  494 (571)
T ss_pred             CChhheeeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHH
Confidence            899999999999999999887                                          78999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCCCCC-CCCCcCchhHHHHHHhhc
Q 017117          319 GSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA-QNINTDTSTGLSRSMAMT  375 (377)
Q Consensus       319 ~~gl~~l~~a~G~~l~~~l~~lv~~~t~~~~~~~~~W~~-~~ln~~~ld~~y~~l~~~  375 (377)
                      ++++|+++.|+||+++.+|++++++.|+  +  ..+|++ +|+|++|+|||||+++.+
T Consensus       495 ~~al~l~t~a~G~~lss~Lv~~v~~~t~--~--~~~w~~~~~ln~~~ld~Fy~lla~~  548 (571)
T KOG1237|consen  495 ATALWLLTVAVGNYLSSVLVSLVQFSTG--K--AAEWLGFANLNKGRLDYFYWLLAVY  548 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcC--C--CcccCChhHhhhhHHHHHHHHHHHH
Confidence            9999999999999999999999999885  3  468999 999999999999999875

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
2xut_A524 Crystal Structure Of A Proton Dependent Oligopeptid 1e-08
>pdb|2XUT|A Chain A, Crystal Structure Of A Proton Dependent Oligopeptide (Pot) Family Transporter. Length = 524 Back     alignment and structure 
Iteration: 1

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 55  LYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 114
            YT L++   G+ GI+P VSSF  DQFD+ +K       + F+ FY ++  G+  A   +
Sbjct: 112 FYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLA---QKAFDMFYFTINFGSFFASLSM 168
Query: 115 VYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP 153
             +    G   AFG   + M ++ + F++G   Y H  P
Sbjct: 169 PLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPP 207
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
2xut_A524 Proton/peptide symporter family protein; transport 2e-56
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 2e-07
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Length = 524 Back     alignment and structure
 Score =  192 bits (489), Expect = 2e-56
 Identities = 71/383 (18%), Positives = 128/383 (33%), Gaps = 81/383 (21%)

Query: 51  QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 110
            +   YT L++   G+ GI+P VSSF  DQFD+     K+   + F+ FY ++  G+  A
Sbjct: 108 SVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQ---SNKSLAQKAFDMFYFTINFGSFFA 164

Query: 111 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 170
              +  +    G   AFG   + M ++ + F++G   Y H  P          V+ +A  
Sbjct: 165 SLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALL 224

Query: 171 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAA------LELKEDVINPS 224
            +     +  L  +  + G  SA      I        L  A       +     +    
Sbjct: 225 TKVEGKGNIGL--VLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLER 282

Query: 225 PWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGHP------ 278
             K      V+ V++++R++ + A       +  +  +  + QA  M             
Sbjct: 283 ARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKPQWFEPAMMQA 342

Query: 279 -------------------------RGASQLQRVGIGLAVSILSVIWAGL---------- 303
                                       + L+++G G+A++ LS I  G           
Sbjct: 343 LNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSA 402

Query: 304 ------------------------LEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNS 339
                                   LEF Y +AP AMK    ++  L+  +G     + N 
Sbjct: 403 LSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANV 462

Query: 340 IIKSVTGNPKKGQPNWLAQNINT 362
            +KS T          +   ++ 
Sbjct: 463 SVKSPTVT-----EQIVQTGMSV 480
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
2xut_A524 Proton/peptide symporter family protein; transport 99.67
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.45
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 98.39
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 98.25
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 97.95
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 96.97
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 96.9
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 96.79
2xut_A524 Proton/peptide symporter family protein; transport 95.81
2cfq_A417 Lactose permease; transport, transport mechanism, 95.75
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 95.11
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 91.26
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 87.69
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
Probab=99.67  E-value=1.2e-16  Score=161.51  Aligned_cols=307  Identities=22%  Similarity=0.290  Sum_probs=182.0

Q ss_pred             HHHHHHHHHHHHHhcccccccchhhhhccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Q 017117           52 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALA  131 (377)
Q Consensus        52 ~~~~~~~L~lia~G~G~~Kpnv~~~~~dqf~~~~~~~~~~~~s~F~~fY~~iNiGsl~a~~~~~yi~~~~g~~~gF~i~~  131 (377)
                      ...++++..+.++|.|+..|+..++++|.+++++.   .+..+.|++++.+.|+|..+++.+.+++.++.||++.|.+.+
T Consensus       109 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~  185 (524)
T 2xut_A          109 VQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNK---SLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPG  185 (524)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTT---THHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccchhHHHHHHHHcCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence            45678888999999999999999999999986442   235788999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccccccCCCCCCchhHHHHHHHHHHHhccccccCcccccccccCCCcccccCCcccccCCCcchhhH
Q 017117          132 IAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDK  211 (377)
Q Consensus       132 i~m~~~l~~f~~g~~~y~~~~p~gs~l~~~~~vi~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~  211 (377)
                      +..+++.+.++..++.++..+|++++..+..+.+..+.+++..+.+ +... +.+.........   ...+.+....+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~  260 (524)
T 2xut_A          186 VLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKG-NIGL-VLALIGGVSAAY---ALVNIPTLGIVAG  260 (524)
T ss_dssp             HHHHHHHHHHHSSSSSCCCCC--------------------CTTHH-HHHH-HHHHHHHHHHHH---TGGGTTTTCSSHH
T ss_pred             HHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhhhcccC-ccch-hhhhhhhhhhhh---hhcccchhhhhhh
Confidence            9998888888777666655555544433333333333333221100 0000 000000000000   0000000000000


Q ss_pred             HHhhh--ccccCCCCCc-------ccccchhhhHhhHhhhhhhhhhhHHHHHHHHhhchhHHHHHHHHhhcc----c---
Q 017117          212 AALEL--KEDVINPSPW-------KLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTH----M---  275 (377)
Q Consensus       212 a~~~~--~~~~~~~~~w-------~l~~~~~vee~k~~~~~l~l~~~~iif~~~~~Q~~t~~~~qa~~md~~----~---  275 (377)
                      +....  ..+...+.||       +.++..++++.|+++..+++++...++|..+.|..+.+..|+.+++.+    .   
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (524)
T 2xut_A          261 LCCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKPQWFEPAMM  340 (524)
T ss_dssp             HHHHHHHHHHHHHTGGGTHHHHSCCSCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHH
T ss_pred             hhhhhhhhhcccccchhhHHhhhhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhcCCCeeecHHHH
Confidence            00000  0000001233       122334456778888888888888899999999888888887766541    1   


Q ss_pred             ------------------------CCCCCCCchhHHHHHHHHHHHHHHHH------------------------------
Q 017117          276 ------------------------GHPRGASQLQRVGIGLAVSILSVIWA------------------------------  301 (377)
Q Consensus       276 ------------------------~~~~~~s~l~ri~iG~~l~~la~~~a------------------------------  301 (377)
                                              |+++++++.+++.+|+++.+++++..                              
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  420 (524)
T 2xut_A          341 QALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEV  420 (524)
T ss_dssp             HTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHH
Confidence                                    11223556677888888777765421                              


Q ss_pred             ----HHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCCCCCC-CCCcCchhHHHHHHhh
Q 017117          302 ----GLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQ-NINTDTSTGLSRSMAM  374 (377)
Q Consensus       302 ----~~~E~~~~~aP~~m~s~~~gl~~l~~a~G~~l~~~l~~lv~~~t~~~~~~~~~W~~~-~ln~~~ld~~y~~l~~  374 (377)
                          ....+..+.+|+++|+.++|++.....+|+.++..+...+...+.      .+|.++ ++|.+  .+.||+.++
T Consensus       421 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~  490 (524)
T 2xut_A          421 LVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTV------TEQIVQTGMSVT--AFQMFFFAG  490 (524)
T ss_dssp             HHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHH------HHHHHHHHSCHH--HHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccc------cccccccccccc--ccHHHHHHH
Confidence                122345789999999999999999999999999999887764332      247654 34433  233565544
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 98.1
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 97.14
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 97.03
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 96.35
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=0.00011  Score=68.67  Aligned_cols=85  Identities=12%  Similarity=0.174  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHhcccccccchhhhhccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhhHHHHH
Q 017117           52 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGAL  130 (377)
Q Consensus        52 ~~~~~~~L~lia~G~G~~Kpnv~~~~~dqf~~~~~~~~~~~~s~F~~fY~~iNiGsl~a~~~~~yi~~~-~g~~~gF~i~  130 (377)
                      ...+++...+.++|.|..-|...++.+|.++++      +|...++++..+.++|..+++.+..++.+. .+|++.|.+.
T Consensus       116 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~  189 (447)
T d1pw4a_         116 IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMP  189 (447)
T ss_dssp             SSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTT------HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHH
T ss_pred             HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhh------cccccccccccccchhhhhhhhhhhhHhhhhhcccccchhh
Confidence            345777888899999999999999999999743      267889999999999999998888776554 5899999988


Q ss_pred             HHHHHHHHHHHH
Q 017117          131 AIAMGISNMLFF  142 (377)
Q Consensus       131 ~i~m~~~l~~f~  142 (377)
                      ++..++..++.+
T Consensus       190 ~~~~~~~~~~~~  201 (447)
T d1pw4a_         190 AFCAILVALFAF  201 (447)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH
Confidence            777665544443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure