Citrus Sinensis ID: 017164


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
cccccccccccccccHHHHHcccccccccEEcccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHEEcHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHcHHHccccHHHHHHcccccccccHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccHHHHHHHHHHHccHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHHHccc
cccccEEEccccccHHHHHccccHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHccccccHcccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccHHEEcccHHHHHHHccHHHEHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHccccccc
mvvgsrvsvpswmSAAAATRVDLEGSVSSVtvssetsskeeALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLsdmrnspsctcavpgtepapecnrykgtLDLFYKVVRQEGFARLWRGTYASLAlsvptvgiylpcydgfrnlmenfttgnapmltpyvplvAGSVARSLACISCYPIELARTRMQAFtetqsgvkppgvwKTLVGVvnplksrnssqklqNYRILWTGVGaqlardvpfsaicwstlePIRRSILSLvgddarvtsilganftggfvaGSIAAaatcpldvsrtrhqiekdptralnmTTRQTLMEIWRdggmkglftgvgprvaragpsvgIVVSFYEVVKYALYQRHQLNN
mvvgsrvsvpswmSAAAATRVDLEGSVSSVTVssetsskeealRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSctcavpgtepapecnryKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTetqsgvkppgvWKTLVGVVnplksrnssqklqNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATcpldvsrtrhqiekdptralnmttRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
MVVGSRVSVPSWMSAAAATRVDLEGsvssvtvssetsskeeALRHSEAINDFSLgfaerafsaagaaivsavivNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
************************************************INDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMR**PSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLK*****QKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQI*****RALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR*****
**************A*A****************************************ERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNS***************CNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMEN********LTPYVPLVAGSVARSLACISCYPIELARTRMQAF***********VWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSIL**********SILGANFTGGFVAGSIAAAATCPLDVSRT****************RQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYA**Q******
**********SWMSAAAATR***********************RHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
*VVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPS*************CNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR*****
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MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q944H5413 Mitochondrial carrier pro yes no 0.864 0.786 0.602 1e-120
Q498U3337 Solute carrier family 25 yes no 0.784 0.875 0.309 6e-35
Q8TBP6338 Solute carrier family 25 yes no 0.776 0.863 0.301 8e-34
Q0VCH6338 Solute carrier family 25 yes no 0.771 0.857 0.288 3e-33
P53320366 Mitochondrial carrier pro yes no 0.811 0.833 0.286 5e-33
Q6DHC3353 Solute carrier family 25 yes no 0.771 0.821 0.3 5e-33
Q552L9366 Mitochondrial substrate c yes no 0.747 0.767 0.306 7e-33
Q8BGP6337 Solute carrier family 25 yes no 0.784 0.875 0.291 7e-32
Q7SXW0359 Solute carrier family 25 no no 0.800 0.838 0.281 4e-31
Q6P316341 Solute carrier family 25 yes no 0.800 0.882 0.286 7e-31
>sp|Q944H5|MTM1_ARATH Mitochondrial carrier protein MTM1 OS=Arabidopsis thaliana GN=MTM1 PE=2 SV=1 Back     alignment and function desciption
 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/360 (60%), Positives = 264/360 (73%), Gaps = 35/360 (9%)

Query: 47  EAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAK------------------------- 81
           + +++ ++GF ER FSAAGAA++SAV +NPLDV K                         
Sbjct: 52  KGLSENNIGFTERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSNSIGRMAF 111

Query: 82  -----MLSDMRNSPSCTCA-VPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTYA 133
                M +D+R SPSC  A V GT     P+C +YKGT D+F K++RQEG  RLWRGT A
Sbjct: 112 FGPNMMFADLRCSPSCARAGVEGTVSICPPDCFQYKGTFDVFTKIIRQEGLGRLWRGTNA 171

Query: 134 SLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELA 193
            LAL+VP VGIYLP YD FRN +E  +   AP +T  VP VAGS+ARSLAC  CYPI+LA
Sbjct: 172 GLALAVPMVGIYLPFYDMFRNRLEELSREKAPAMTFCVPTVAGSLARSLACTVCYPIDLA 231

Query: 194 RTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQK-LQNYRILWTGVGAQLARDVPF 252
           RTRMQAF E ++GVKPPGV+KTLVGV + +++ N+ +  L NYR LW G+GAQLARDVPF
Sbjct: 232 RTRMQAFKEAKAGVKPPGVFKTLVGVFSEVRTANNLESSLHNYRGLWRGLGAQLARDVPF 291

Query: 253 SAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIE 312
           SAICWSTLEPI++ +L + G+D  +  + GA F+ GF+AGSIAAAATCPLDV+RTR QIE
Sbjct: 292 SAICWSTLEPIKKRLLGVAGNDTNLVGVFGATFSAGFIAGSIAAAATCPLDVARTRRQIE 351

Query: 313 KDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRH 372
           KDP RAL MTTRQTL+E+WRDGGM+GLF G+GPRVARAGPSVGIVVSFYEVVKY L+ RH
Sbjct: 352 KDPGRALMMTTRQTLIEVWRDGGMRGLFMGMGPRVARAGPSVGIVVSFYEVVKYVLH-RH 410




Involved in the mitochondrial activation of MSD1 by specifically facilitating insertion of the essential manganese cofactor. Has the ability to activate iron regulon in an iron-dependent manner.
Arabidopsis thaliana (taxid: 3702)
>sp|Q498U3|S2540_RAT Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2 Back     alignment and function description
>sp|Q8TBP6|S2540_HUMAN Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q0VCH6|S2540_BOVIN Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|P53320|MTM1_YEAST Mitochondrial carrier protein MTM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MTM1 PE=1 SV=1 Back     alignment and function description
>sp|Q6DHC3|S2540_DANRE Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description
>sp|Q8BGP6|S2540_MOUSE Solute carrier family 25 member 40 OS=Mus musculus GN=Slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q7SXW0|S2539_DANRE Solute carrier family 25 member 39 OS=Danio rerio GN=slc25a39 PE=2 SV=1 Back     alignment and function description
>sp|Q6P316|S2540_XENTR Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
225454448407 PREDICTED: solute carrier family 25 memb 0.994 0.918 0.674 1e-155
147812722 528 hypothetical protein VITISV_014580 [Viti 0.994 0.708 0.667 1e-154
297745394374 unnamed protein product [Vitis vinifera] 0.885 0.890 0.701 1e-145
242079023399 hypothetical protein SORBIDRAFT_07g01943 0.981 0.924 0.665 1e-140
308080630399 uncharacterized protein LOC100502509 [Ze 0.981 0.924 0.657 1e-140
226507384398 mitochondrial carrier protein CGI-69 [Ze 0.978 0.924 0.662 1e-139
194696384398 unknown [Zea mays] 0.978 0.924 0.662 1e-139
413922178398 carrier protein CGI-69 [Zea mays] 0.978 0.924 0.662 1e-139
449432094404 PREDICTED: solute carrier family 25 memb 0.981 0.913 0.631 1e-139
224064175399 predicted protein [Populus trichocarpa] 0.984 0.927 0.646 1e-138
>gi|225454448|ref|XP_002276620.1| PREDICTED: solute carrier family 25 member 39-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/405 (67%), Positives = 324/405 (80%), Gaps = 31/405 (7%)

Query: 2   VVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEAL---RHSEAINDFSLGFAE 58
           +VGSR S+PSW+  AAATRVD+EG+VSS++ +    ++EE+    ++S+A++D  LGF +
Sbjct: 1   MVGSRPSLPSWI-GAAATRVDIEGNVSSMSDTMFRENREESAPPEQYSKALSDGDLGFGQ 59

Query: 59  RAFSAAGAAIVSAVIVNPLDVAK-------------------------MLSDMRNSPSCT 93
           RAFSAAGAA +SA+IVNPLDVAK                         M SD+R SPSCT
Sbjct: 60  RAFSAAGAAFISAIIVNPLDVAKTRLQAQAAGVSYHGLCRMAPFETVSMFSDVRYSPSCT 119

Query: 94  CAVPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDG 151
            A     P   P+C +Y+GTLD+F K++RQEGF RLWRGT ASLAL++PTVGIYLPCYD 
Sbjct: 120 RAALSDVPVCPPDCFQYRGTLDVFSKMIRQEGFMRLWRGTSASLALAMPTVGIYLPCYDI 179

Query: 152 FRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPG 211
           FRN ME FTT NAP LTPYVPLVAGS+ARSLACI+CYP+ELARTRMQAF ETQSG KPPG
Sbjct: 180 FRNFMEEFTTQNAPSLTPYVPLVAGSLARSLACITCYPVELARTRMQAFKETQSGTKPPG 239

Query: 212 VWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLV 271
           VWKTL GV++P++S N+ Q  Q+YR+LWTG+GAQLARDVPFSAICWSTLEPIRR I+ L+
Sbjct: 240 VWKTLHGVISPVRSTNNIQNFQSYRVLWTGLGAQLARDVPFSAICWSTLEPIRRRIIGLI 299

Query: 272 GDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIW 331
           GD+A   S+LGANF+ GFVAGS+AAAATCPLDV++TR QIEKDPTRA  MTTRQTL+EIW
Sbjct: 300 GDEATAASVLGANFSAGFVAGSLAAAATCPLDVAKTRRQIEKDPTRAWKMTTRQTLLEIW 359

Query: 332 RDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN 376
           RDGGM+GLFTG+GPRV RAGPSVGIVVSFYEVVKY L+ R QLNN
Sbjct: 360 RDGGMRGLFTGIGPRVGRAGPSVGIVVSFYEVVKYGLHHRRQLNN 404




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812722|emb|CAN61750.1| hypothetical protein VITISV_014580 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745394|emb|CBI40474.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|242079023|ref|XP_002444280.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] gi|241940630|gb|EES13775.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|308080630|ref|NP_001183916.1| uncharacterized protein LOC100502509 [Zea mays] gi|238015420|gb|ACR38745.1| unknown [Zea mays] gi|414870516|tpg|DAA49073.1| TPA: hypothetical protein ZEAMMB73_432177 [Zea mays] Back     alignment and taxonomy information
>gi|226507384|ref|NP_001150430.1| mitochondrial carrier protein CGI-69 [Zea mays] gi|195639200|gb|ACG39068.1| mitochondrial carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information
>gi|194696384|gb|ACF82276.1| unknown [Zea mays] Back     alignment and taxonomy information
>gi|413922178|gb|AFW62110.1| carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information
>gi|449432094|ref|XP_004133835.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] gi|449477895|ref|XP_004155155.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224064175|ref|XP_002301398.1| predicted protein [Populus trichocarpa] gi|222843124|gb|EEE80671.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
TAIR|locus:2039055361 AT2G46320 [Arabidopsis thalian 0.763 0.795 0.682 1.2e-106
TAIR|locus:2132947413 MTM1 "AT4G27940" [Arabidopsis 0.771 0.702 0.667 2e-102
UNIPROTKB|F1PQ27350 SLC25A39 "Uncharacterized prot 0.643 0.691 0.343 6.9e-31
UNIPROTKB|I3LL52331 SLC25A39 "Uncharacterized prot 0.643 0.731 0.335 3e-30
MGI|MGI:1196386359 Slc25a39 "solute carrier famil 0.643 0.674 0.339 3e-30
RGD|1306193359 Slc25a39 "solute carrier famil 0.651 0.682 0.326 4.9e-30
SGD|S000003489366 MTM1 "Mitochondrial protein of 0.675 0.693 0.322 4.9e-30
UNIPROTKB|B4DFG5336 SLC25A39 "Solute carrier famil 0.643 0.720 0.339 6.2e-30
UNIPROTKB|Q9BZJ4359 SLC25A39 "Solute carrier famil 0.643 0.674 0.339 6.2e-30
RGD|1308774337 Slc25a40 "solute carrier famil 0.651 0.727 0.336 1e-29
TAIR|locus:2039055 AT2G46320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
 Identities = 200/293 (68%), Positives = 236/293 (80%)

Query:    82 MLSDMR-NSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVP 140
             ++ D+R NS    C + G+      N+YKGTLD+FYK++RQEGF+RLWRGT ASL L++P
Sbjct:    73 LVHDLRSNSAPGMCRITGSASVCSDNQYKGTLDVFYKIIRQEGFSRLWRGTNASLTLAIP 132

Query:   141 TVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAF 200
             TVGIY+PCYD FRN+ME FTT  +P LT YVPLVAG++ARSLACISCYP+ELARTRMQAF
Sbjct:   133 TVGIYMPCYDYFRNIMEEFTTEKSPSLTVYVPLVAGTIARSLACISCYPVELARTRMQAF 192

Query:   201 TETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTL 260
               TQ  VK PGVWKTLV VVNP+K  N+      YR+LWTG+GAQLARDVPFSAICWS L
Sbjct:   193 KGTQRNVKLPGVWKTLVDVVNPVKGSNNG-----YRMLWTGLGAQLARDVPFSAICWSIL 247

Query:   261 EPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALN 320
             EP RRSI S +G++ R  SI+GANF  GFVAG++AAAATCPLDV++TR QIEK+  RA+ 
Sbjct:   248 EPTRRSIQSAMGEEPRAGSIIGANFAAGFVAGAVAAAATCPLDVAKTRRQIEKNTDRAMT 307

Query:   321 MTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQ 373
             MTTRQTL EIWRDGGM+G+F+G G RV RAGPSV IVVSFYEVVKY L+  HQ
Sbjct:   308 MTTRQTLAEIWRDGGMRGMFSGAGARVGRAGPSVAIVVSFYEVVKYGLHNFHQ 360




GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2132947 MTM1 "AT4G27940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1PQ27 SLC25A39 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LL52 SLC25A39 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1196386 Slc25a39 "solute carrier family 25, member 39" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306193 Slc25a39 "solute carrier family 25, member 39" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
SGD|S000003489 MTM1 "Mitochondrial protein of the mitochondrial carrier family" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|B4DFG5 SLC25A39 "Solute carrier family 25 member 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BZJ4 SLC25A39 "Solute carrier family 25 member 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1308774 Slc25a40 "solute carrier family 25, member 40" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q944H5MTM1_ARATHNo assigned EC number0.60270.86430.7869yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-16
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-16
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-04
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 73.1 bits (180), Expect = 3e-16
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 53  SLGFAERAFSAAGAAIVSAVIVNPLDVAK-MLSDMRNSPSCTCAVPGTEPAPECNRYKGT 111
            L F     +   A  ++A +  PLDV K  L       S               +YKG 
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGS--------------RKYKGI 47

Query: 112 LDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLM 156
           LD F K+ ++EG   L++G   +L    P   IY   Y+  + L+
Sbjct: 48  LDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.92
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.88
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG2954427 consensus Mitochondrial carrier protein [General f 99.72
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.63
KOG1519297 consensus Predicted mitochondrial carrier protein 99.59
KOG2954427 consensus Mitochondrial carrier protein [General f 98.54
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.5e-58  Score=398.23  Aligned_cols=292  Identities=22%  Similarity=0.316  Sum_probs=257.6

Q ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHhhcCCCCCCcCCCCCCCCCccccccccHHHHHHHHHHhhccccccccchhhhh
Q 017164           57 AERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLA  136 (376)
Q Consensus        57 ~~~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~  136 (376)
                      +..+++|.+||+++.+++||+|++|+|.|++...           ......|++++++++.|+|.||++|||||+.|.++
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~-----------~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~   74 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR-----------TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVL   74 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc-----------cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHH
Confidence            3456999999999999999999999999987221           23446899999999999999999999999999999


Q ss_pred             hhhhchhhhHhHHHHHHHHhhhhcCCCCCCCCchhhhhhhhHHHHHHHHhhchHHHHHHHHHhcccccCCCCCCchhhhH
Q 017164          137 LSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTL  216 (376)
Q Consensus       137 ~~~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~ik~rlq~~~~~~~~~~~~~~~~~~  216 (376)
                      +..+.+++||.+||.+|.++.+.....  .++...++.+++.||+++.++++|+.|+|||++.+........|+++++++
T Consensus        75 G~~~sWgiYF~~Y~~~K~~~~~~~~~~--~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~  152 (299)
T KOG0764|consen   75 GSAPSWGLYFFFYDFLKSFITEGFNSG--LLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDAL  152 (299)
T ss_pred             hchhhHHHHHHHHHHHHHHHhcCCCcc--cchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHH
Confidence            999999999999999999996544332  356788999999999999999999999999999998877777899999999


Q ss_pred             hhhhcccccccccccccchhhhccchhhhhhhhhhhhhhHHHhHHHHHHHHHhhhCCCcccccchhhhhhhhhHHHHhHh
Q 017164          217 VGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAA  296 (376)
Q Consensus       217 ~~i~~~~~~~~~~~~~~G~~glyrG~~~~llr~~~~~~i~f~~~e~lk~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~  296 (376)
                      ++++++|          |++|||+|+.|.++. +...+++|..||.+|..+.+..+...+........++.+.++.++++
T Consensus       153 rki~k~E----------G~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~As  221 (299)
T KOG0764|consen  153 RKIYKEE----------GFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFAS  221 (299)
T ss_pred             HHHHHHH----------hHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHH
Confidence            9999999          999999999999996 67899999999999999876554433322233336666669999999


Q ss_pred             hhcchhhHHHHhhhcccCCCccCCCCHHHHHHHHHHhcCccccccChhHHhhhhcccceeeHhhHHHHHHHHhhhhcc
Q 017164          297 AATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQL  374 (376)
Q Consensus       297 ~~t~Pldvvk~r~q~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~  374 (376)
                      ++|||++|+|+|||.++.  .+.|.+.++|++++|++||++|||||+.++++|.+|.+.|+|+.||.++++|....+.
T Consensus       222 t~TYP~qVlRtRLQ~~~~--~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~~~  297 (299)
T KOG0764|consen  222 TLTYPHQVLRTRLQDQSD--NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHRTK  297 (299)
T ss_pred             HhcchHHHHHHHHHhccc--CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccccc
Confidence            999999999999999875  6678999999999999999999999999999999999999999999999999776543



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-09
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-06
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 116/300 (38%), Gaps = 31/300 (10%) Query: 76 PLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASL 135 PLD AK+ ++ G +Y+G L +VR EG L+ G A L Sbjct: 21 PLDTAKVRLQIQGESQ------GLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGL 74 Query: 136 ALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELART 195 + + + YD ++ F T + L+AGS +LA P ++ + Sbjct: 75 QRQMSFASVRIGLYDS----VKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKV 130 Query: 196 RMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAI 255 R QA G + + +++ + + + R LW G +AR+ + Sbjct: 131 RFQAQARAGGGRRYQ----------STVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180 Query: 256 CWSTLEPIRRSIL--SLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEK 313 T + I+ ++L +L+ DD L +FT F AG P+DV +TR+ Sbjct: 181 ELVTYDLIKDTLLKANLMTDD------LPCHFTSAFGAGFCTTVIASPVDVVKTRYM--- 231 Query: 314 DPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQ 373 + + + + R G + + G P R G ++ YE +K AL +Q Sbjct: 232 NSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQ 291
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-40
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-21
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-32
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-25
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 5e-24
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-10
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-09
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  143 bits (363), Expect = 2e-40
 Identities = 60/323 (18%), Positives = 120/323 (37%), Gaps = 30/323 (9%)

Query: 50  NDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYK 109
           +D +L F +   +   AA +S   V P++  K+L  ++   +       ++      +YK
Sbjct: 1   SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLL--LQVQHA-------SKQISAEKQYK 51

Query: 110 GTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRN-LMENFTTGNAPMLT 168
           G +D   ++ +++GF   WRG  A++    PT  +     D ++   +            
Sbjct: 52  GIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRY 111

Query: 169 PYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGV-KPPGVWKTLVGVVNPLKSRN 227
               L +G  A + +    YP++ ARTR+ A     +   +  G+   +  +        
Sbjct: 112 FAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF------- 164

Query: 228 SSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTG 287
              K    R L+ G    +   + + A  +   +  +  +      D +   I+  ++  
Sbjct: 165 ---KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLP-----DPKNVHII-VSWMI 215

Query: 288 GFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNM--TTRQTLMEIWRDGGMKGLFTGVGP 345
                ++A   + P D  R R  ++     A  M   T     +I +D G K  F G   
Sbjct: 216 AQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWS 275

Query: 346 RVARAGPSVGIVVSFYEVVKYAL 368
            V R       V+  Y+ +K  +
Sbjct: 276 NVLRGMGG-AFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1e-55  Score=410.56  Aligned_cols=286  Identities=23%  Similarity=0.318  Sum_probs=248.2

Q ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHhhcCCCCCCcCCCCCCCCCccccccccHHHHHHHHHHhhccccccccchhhhhhh
Q 017164           59 RAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALS  138 (376)
Q Consensus        59 ~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~  138 (376)
                      .+++|++||+++.++++|+|+||+|+|++.......      .......|+++++++++|+++||++|||||+.+++++.
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~   77 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLV------RTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQ   77 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHH------HHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhcccccc------ccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHH
Confidence            589999999999999999999999999864311000      00112468999999999999999999999999999999


Q ss_pred             hhchhhhHhHHHHHHHHhhhhcCCCCCCCCchhhhhhhhHHHHHHHHhhchHHHHHHHHHhcccccCCCCCCchhhhHhh
Q 017164          139 VPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVG  218 (376)
Q Consensus       139 ~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~ik~rlq~~~~~~~~~~~~~~~~~~~~  218 (376)
                      ++..+++|++||.+|+.+.+...    ..+....+++|++||+++.++++|+|++|+|+|++.......+|++.++++++
T Consensus        78 ~~~~~i~f~~ye~~k~~~~~~~~----~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~  153 (303)
T 2lck_A           78 MSFASVRIGLYDSVKQFYTKGSE----HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKT  153 (303)
T ss_dssp             HHHHHHTTTHHHHHHHHHSCCCS----SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCc----CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHH
Confidence            99999999999999998865421    23467789999999999999999999999999998654334478999999999


Q ss_pred             hhcccccccccccccchhhhccchhhhhhhhhhhhhhHHHhHHHHHHHHHhhhCCCcccccchhhhhhhhhHHHHhHhhh
Q 017164          219 VVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAA  298 (376)
Q Consensus       219 i~~~~~~~~~~~~~~G~~glyrG~~~~llr~~~~~~i~f~~~e~lk~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~  298 (376)
                      +++++          |++|||||+.|.+++.+|+.+++|.+||.+|+.+.+....    .......+++|+++|++++++
T Consensus       154 i~~~e----------G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~----~~~~~~~~~~g~~ag~~~~~~  219 (303)
T 2lck_A          154 IAREE----------GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLM----TDDLPCHFTSAFGAGFCTTVI  219 (303)
T ss_dssp             HHHHH----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSC----CSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhc----------ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCchHHHHHHHHHHHHHHHHH
Confidence            99999          9999999999999999999999999999999987653221    122334899999999999999


Q ss_pred             cchhhHHHHhhhcccCCCccCCCCHHHHHHHHHHhcCccccccChhHHhhhhcccceeeHhhHHHHHHHHhhh
Q 017164          299 TCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR  371 (376)
Q Consensus       299 t~Pldvvk~r~q~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~~~~~~~~i~~~~~e~~~~~~~~~  371 (376)
                      ++|+|+||+|||.+..   ..|.++++|+++++++||+++||||+.++++|.+|.+++.|.+||.+++.+.+.
T Consensus       220 ~~P~dvvktrlq~~~~---~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~  289 (303)
T 2lck_A          220 ASPVDVVKTRYMNSAL---GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA  289 (303)
T ss_dssp             HHHHHHHHHHHTTCCS---SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred             cCHHHHHHHHHHhccc---cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999864   248899999999999999999999999999999999999999999999887544



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-21
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 90.5 bits (223), Expect = 3e-21
 Identities = 57/316 (18%), Positives = 114/316 (36%), Gaps = 27/316 (8%)

Query: 51  DFSLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKG 110
           D +L F +   +   AA +S   V P++  K+L  ++++     A           +YKG
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEK---------QYKG 51

Query: 111 TLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPY 170
            +D   ++ +++GF   WRG  A++    PT  +     D ++ +       +      +
Sbjct: 52  IIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYF 111

Query: 171 V-PLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSS 229
              L +G  A + +    YP++ ARTR+ A              +   G+ N +      
Sbjct: 112 AGNLASGGAAGATSLCFVYPLDFARTRLAADV------GKGAAQREFTGLGNCITKI--- 162

Query: 230 QKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGF 289
            K    R L+ G    +   + + A  +   +  +                +  ++    
Sbjct: 163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM------LPDPKNVHIIVSWMIAQ 216

Query: 290 VAGSIAAAATCPLDVSRTRHQIEKD--PTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRV 347
              ++A   + P D  R R  ++        +   T     +I +D G K  F G    V
Sbjct: 217 TVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNV 276

Query: 348 ARAGPSVGIVVSFYEV 363
            R      ++V + E+
Sbjct: 277 LRGMGGAFVLVLYDEI 292


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=2.4e-50  Score=370.35  Aligned_cols=286  Identities=19%  Similarity=0.307  Sum_probs=245.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHhhcchHHHHHHHhhcCCCCCCcCCCCCCCCCccccccccHHHHHHHHHHhhccccccccch
Q 017164           53 SLGFAERAFSAAGAAIVSAVIVNPLDVAKMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTY  132 (376)
Q Consensus        53 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~  132 (376)
                      ++++...++||++||+++.+++||||+||+|+|++....         .......|+++++++++++++||+++||||+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~   73 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK---------QISAEKQYKGIIDCVVRIPKEQGFLSFWRGNL   73 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS---------SCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCC---------CCCcccccCCHHHHHHHHHHhhhhhhhhhccc
Confidence            456788999999999999999999999999999874321         13345678999999999999999999999999


Q ss_pred             hhhhhhhhchhhhHhHHHHHHHHhhhhcCCCCCC-CCchhhhhhhhHHHHHHHHhhchHHHHHHHHHhcccccC-CCCCC
Q 017164          133 ASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPM-LTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQS-GVKPP  210 (376)
Q Consensus       133 ~~~~~~~~~~~~~f~~y~~~k~~~~~~~~~~~~~-~~~~~~~~ag~~ag~~~~~v~~Pld~ik~rlq~~~~~~~-~~~~~  210 (376)
                      +.+++..+...++|.+|+.+++.+.+........ ......+++|.+||+++.++++|+|++|+|+|++..... ...+.
T Consensus        74 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~  153 (292)
T d1okca_          74 ANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFT  153 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCS
T ss_pred             hhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccc
Confidence            9999999999999999999999988766443221 223456889999999999999999999999999865432 33678


Q ss_pred             chhhhHhhhhcccccccccccccchhhhccchhhhhhhhhhhhhhHHHhHHHHHHHHHhhhCCCcccccchhhhhhhhhH
Q 017164          211 GVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFV  290 (376)
Q Consensus       211 ~~~~~~~~i~~~~~~~~~~~~~~G~~glyrG~~~~llr~~~~~~i~f~~~e~lk~~~~~~~~~~~~~~~~~~~~~~~g~~  290 (376)
                      +..++++++++++          |+++||+|+.+.+++.+|+.+++|..||.+|+.+.+..      .......++++.+
T Consensus       154 ~~~~~~~~~~~~~----------G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~  217 (292)
T d1okca_         154 GLGNCITKIFKSD----------GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK------NVHIIVSWMIAQT  217 (292)
T ss_dssp             SHHHHHHHHHHHH----------CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG------CSCHHHHHHHHHH
T ss_pred             cHHHHHHHhhhcc----------chhhhhccccccccceehHhhhhhhhccchhhhccccc------ccchHHHHHHHHH
Confidence            9999999999999          99999999999999999999999999999998654322      1223348899999


Q ss_pred             HHHhHhhhcchhhHHHHhhhcccCCC--ccCCCCHHHHHHHHHHhcCccccccChhHHhhhhcccceeeHhhHHHH
Q 017164          291 AGSIAAAATCPLDVSRTRHQIEKDPT--RALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVV  364 (376)
Q Consensus       291 ag~~~~~~t~Pldvvk~r~q~~~~~~--~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~~~~~~~~i~~~~~e~~  364 (376)
                      +++++++++||+||||+|||.+....  ...|.++++|+++++++||+++||||+.++++|.++ .+++|.+||.+
T Consensus       218 ~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         218 VTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            99999999999999999999987543  346899999999999999999999999999999766 68899999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure