Citrus Sinensis ID: 017173

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MAGKKRRKLKLLAETETDGTKMVTEGKEERLELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDISAFI
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEccccccccccccccccccccccEEEEEcccccEEEEEccccccEEEEEcccccccEEEEEcccEEEEEccccccEEEEcccccccccccccccEEEEEEEEEcccccccEEEEEEcccccEEEEEEEEcccccEEEEcccccccccccccEEEEEEccEEEEEcccccEEEEEcccccccEEEEcccccccccccccccccEEEEEEccEEEEEEEEcccccEEEEEEcccccEEEEccccccEEEEccccEEEccccccEEccEEEEEEccccccEEEEEEccccEEEccccccccccccccccEEEcccccccccc
ccccccHHHHHccccccccccccccHHHcccccccHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccEEEEEccccccEEEEccccccccEEEEccccEEEEEccccccEEEEcccccccEccccccccccEEEEEcccccccEEEEEEEcccccEEEEEEEEccccEEEEEcccccccccccccccEEEEccEEEEEEcccEEEEEEcccccccEEEccccccccccccccccccEEEEEEccEEEEEEEEccccEEEEEEEcccccEEEEEccccEEEEEEcccEEcccccccccccEEEEEccccccccEEEEEcccccEEccccccccccccccccEEEcccccccccc
MAGKKRRKLKLLAEtetdgtkmvtegkeerlelhdwsELPAELLELIMCHLTLEDNVHASVVckkwhapaisvrvvnqspwlmyfpkfgnlyefydpaqrktyslelpelygsrvcytkdswlllyrprthrvfffnpftrdmiklprfELTYQIVAfscaptssscvvftVKHISPTVVaistchpgatewvtdnyqnrlpFVSSIWNKLVFCNGIFYCLSltgwlgvfdpvkrdwgvlvvpppkcpenffaknwwkgkfmvEHKGDILVIYTCcsenpiifkldqSKMAWEEMKTLDGLTLFASFLssqsradlpgimrnsvYFSKVRFFGKRcisyslndsryyprkqcydwgeqdpfeniwieppedisafi
magkkrrklkllaetetdgtkmvtegkeerlelhDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSqsradlpgiMRNSVYFSKVRFFGKRCIsyslndsryyPRKQCYDWGEQDPFENIWIEPPEDISAFI
MAGkkrrklkllAETETDGTKMVTEGKEERLELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDISAFI
*******************************ELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIE*********
****************************************AELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPED****I
********LKLLAETETDGTKMVTEGKEERLELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDISAFI
*********************************HDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDISAFI
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MAGKKRRKLKLLAETETDGTKMVTEGKEERLELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDISAFI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q9FVS1352 F-box/kelch-repeat protei yes no 0.880 0.940 0.482 4e-86
Q9LXZ3367 F-box protein At3g56470 O no no 0.859 0.880 0.445 1e-78
Q1G391388 F-box protein At4g00893 O no no 0.880 0.853 0.434 3e-76
Q9XIA2481 F-box protein At1g49360 O no no 0.930 0.727 0.353 1e-51
Q9LSA5380 F-box/kelch-repeat protei no no 0.829 0.821 0.379 8e-50
Q1G3I7138 F-box protein At4g12382 O no no 0.335 0.913 0.5 2e-32
O49647396 Putative F-box protein At no no 0.303 0.287 0.322 7e-09
Q9SU05382 Putative F-box/kelch-repe no no 0.718 0.706 0.257 1e-08
Q9FKZ7394 Putative F-box protein At no no 0.723 0.690 0.234 2e-08
O49624402 Putative F-box protein At no no 0.305 0.286 0.319 2e-07
>sp|Q9FVS1|FBK23_ARATH F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana GN=At1g57790 PE=2 SV=1 Back     alignment and function desciption
 Score =  318 bits (815), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 164/340 (48%), Positives = 226/340 (66%), Gaps = 9/340 (2%)

Query: 36  WSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFY 95
           W +LP ELL  +M  L ++DNV ASVVCK W   A+SVRV+++SPWLMYFP+  N Y+FY
Sbjct: 13  WKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDKSPWLMYFPETKNTYDFY 72

Query: 96  DPAQRKTYSLELPE-LYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFEL--T 152
           DP+  K Y++ELP+ L G  V Y+KD WLL+ +  +     FNPFT D++ LP   L   
Sbjct: 73  DPSNCKKYTMELPKSLVGFIVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFLHLFTY 132

Query: 153 YQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLV 212
           YQ+V FS APTSS CVVFT+K   P  V I T  PG T W +   +++  F+    N +V
Sbjct: 133 YQLVGFSSAPTSSECVVFTIKDYDPGHVTIRTWSPGQTMWTSMQVESQ--FLDVDHNNVV 190

Query: 213 FCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVI 272
           F NG+FYCL+    + VFDP  R W VL VPPP+CP++   K+W +GKFMV +KGDILVI
Sbjct: 191 FSNGVFYCLNQRNHVAVFDPSLRTWNVLDVPPPRCPDD---KSWNEGKFMVGYKGDILVI 247

Query: 273 YTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADL-PGIMRNSVYFSKVRF 331
            T  +++P++FKLD ++  WEE  TL  LT+F S  S +SR  +  G++RNSVYF ++ +
Sbjct: 248 RTYENKDPLVFKLDLTRGIWEEKDTLGSLTIFVSRKSCESRTYVKDGMLRNSVYFPELCY 307

Query: 332 FGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPED 371
             K+ + YS ++ RY+ R+   DWG+Q   +NIWIEPP++
Sbjct: 308 NEKQSVVYSFDEGRYHLREHDLDWGKQLSSDNIWIEPPKN 347

Arabidopsis thaliana (taxid: 3702)
>sp|Q9LXZ3|FB204_ARATH F-box protein At3g56470 OS=Arabidopsis thaliana GN=At3g56470 PE=2 SV=1 Back     alignment and function description
>sp|Q1G391|FB217_ARATH F-box protein At4g00893 OS=Arabidopsis thaliana GN=At4g00893 PE=2 SV=1 Back     alignment and function description
>sp|Q9XIA2|FB49_ARATH F-box protein At1g49360 OS=Arabidopsis thaliana GN=At1g49360 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSA5|FBK62_ARATH F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana GN=At3g18720 PE=2 SV=1 Back     alignment and function description
>sp|Q1G3I7|FB232_ARATH F-box protein At4g12382 OS=Arabidopsis thaliana GN=At4g12382 PE=2 SV=1 Back     alignment and function description
>sp|O49647|FB246_ARATH Putative F-box protein At4g22660 OS=Arabidopsis thaliana GN=At4g22660 PE=4 SV=1 Back     alignment and function description
>sp|Q9SU05|FBK82_ARATH Putative F-box/kelch-repeat protein At4g12810 OS=Arabidopsis thaliana GN=At4g12810 PE=4 SV=1 Back     alignment and function description
>sp|Q9FKZ7|FB301_ARATH Putative F-box protein At5g66830 OS=Arabidopsis thaliana GN=At5g66830 PE=4 SV=1 Back     alignment and function description
>sp|O49624|FB242_ARATH Putative F-box protein At4g22180 OS=Arabidopsis thaliana GN=At4g22180 PE=4 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
255578937376 transcription regulation, putative [Rici 1.0 1.0 0.832 0.0
356572568376 PREDICTED: F-box/kelch-repeat protein At 0.994 0.994 0.796 0.0
255636866376 unknown [Glycine max] 0.994 0.994 0.794 0.0
224140101344 predicted protein [Populus trichocarpa] 0.914 1.0 0.851 1e-180
224091983376 predicted protein [Populus trichocarpa] 1.0 1.0 0.816 1e-179
356505380377 PREDICTED: F-box/kelch-repeat protein At 0.994 0.992 0.797 1e-178
359806246376 uncharacterized protein LOC100809651 [Gl 0.997 0.997 0.786 1e-177
388513169376 unknown [Medicago truncatula] 0.997 0.997 0.776 1e-176
356548441376 PREDICTED: F-box/kelch-repeat protein At 0.997 0.997 0.776 1e-176
225440866376 PREDICTED: F-box/kelch-repeat protein At 0.997 0.997 0.733 1e-169
>gi|255578937|ref|XP_002530321.1| transcription regulation, putative [Ricinus communis] gi|223530125|gb|EEF32037.1| transcription regulation, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/376 (83%), Positives = 340/376 (90%)

Query: 1   MAGKKRRKLKLLAETETDGTKMVTEGKEERLELHDWSELPAELLELIMCHLTLEDNVHAS 60
           MAG+KRRKLK LA    D  +      ++ LEL  WS+LP ELLELI CHLTLEDN+HAS
Sbjct: 1   MAGRKRRKLKSLAAAVMDSKRATINNIKDNLELQTWSDLPIELLELIFCHLTLEDNIHAS 60

Query: 61  VVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKD 120
           VVCK+WH  AISVRVVN+SPWLMYFPK+GNLYEFYDPAQRKTYSLELPELY SR+CYTKD
Sbjct: 61  VVCKRWHTAAISVRVVNKSPWLMYFPKYGNLYEFYDPAQRKTYSLELPELYWSRICYTKD 120

Query: 121 SWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVV 180
            WLLLYRP THRVFFFNPFT+ MIKLPRFELTYQIVAFS +PT++SCVVFTVKHISPT+V
Sbjct: 121 GWLLLYRPITHRVFFFNPFTKKMIKLPRFELTYQIVAFSSSPTNASCVVFTVKHISPTIV 180

Query: 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVL 240
           AISTCHPGATEWVT NYQNRLPFVSSIWNK+VFC+G+FYCLSLTGWLGVFDPV+R W VL
Sbjct: 181 AISTCHPGATEWVTVNYQNRLPFVSSIWNKIVFCSGLFYCLSLTGWLGVFDPVERTWNVL 240

Query: 241 VVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDG 300
           VVPPPKCPENFFAKNWWKGKFM EH GDILVIYTCCSENPIIFKL++S M WEEMKTLDG
Sbjct: 241 VVPPPKCPENFFAKNWWKGKFMSEHNGDILVIYTCCSENPIIFKLNKSNMTWEEMKTLDG 300

Query: 301 LTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDP 360
           +TLFASFLSS SR DLPGIMRNS+YFSKVRFFGKRCISYSL+D RYYPRKQC+DWGEQDP
Sbjct: 301 VTLFASFLSSHSRTDLPGIMRNSIYFSKVRFFGKRCISYSLDDCRYYPRKQCHDWGEQDP 360

Query: 361 FENIWIEPPEDISAFI 376
           FENIWIEPPED+S F+
Sbjct: 361 FENIWIEPPEDLSTFV 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356572568|ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max] Back     alignment and taxonomy information
>gi|255636866|gb|ACU18766.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224140101|ref|XP_002323425.1| predicted protein [Populus trichocarpa] gi|222868055|gb|EEF05186.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224091983|ref|XP_002309425.1| predicted protein [Populus trichocarpa] gi|222855401|gb|EEE92948.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356505380|ref|XP_003521469.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max] Back     alignment and taxonomy information
>gi|359806246|ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max] gi|255641457|gb|ACU21004.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388513169|gb|AFK44646.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356548441|ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max] Back     alignment and taxonomy information
>gi|225440866|ref|XP_002276543.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
TAIR|locus:2009430352 AT1G57790 "AT1G57790" [Arabido 0.880 0.940 0.482 9.1e-84
TAIR|locus:2102519367 AT3G56470 "AT3G56470" [Arabido 0.898 0.920 0.435 3.8e-78
TAIR|locus:4010713853388 AT4G00893 [Arabidopsis thalian 0.880 0.853 0.434 7.1e-77
TAIR|locus:2139064300 AT4G12370 "AT4G12370" [Arabido 0.765 0.96 0.464 5.6e-68
TAIR|locus:2139207317 AT4G10660 "AT4G10660" [Arabido 0.755 0.895 0.450 1.8e-62
TAIR|locus:2010172481 AT1G49360 "AT1G49360" [Arabido 0.861 0.673 0.379 4.4e-52
TAIR|locus:2094004380 AT3G18720 "AT3G18720" [Arabido 0.835 0.826 0.386 1.3e-50
TAIR|locus:2132746247 AT4G10700 "AT4G10700" [Arabido 0.289 0.441 0.479 7.6e-46
TAIR|locus:504955409234 AT4G10695 "AT4G10695" [Arabido 0.582 0.935 0.408 2.8e-43
TAIR|locus:4515103379138 AT4G12382 "AT4G12382" [Arabido 0.332 0.905 0.504 8.5e-33
TAIR|locus:2009430 AT1G57790 "AT1G57790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 164/340 (48%), Positives = 226/340 (66%)

Query:    36 WSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRVVNQSPWLMYFPKFGNLYEFY 95
             W +LP ELL  +M  L ++DNV ASVVCK W   A+SVRV+++SPWLMYFP+  N Y+FY
Sbjct:    13 WKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDKSPWLMYFPETKNTYDFY 72

Query:    96 DPAQRKTYSLELPE-LYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELT-- 152
             DP+  K Y++ELP+ L G  V Y+KD WLL+ +  +     FNPFT D++ LP   L   
Sbjct:    73 DPSNCKKYTMELPKSLVGFIVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFLHLFTY 132

Query:   153 YQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLV 212
             YQ+V FS APTSS CVVFT+K   P  V I T  PG T W +   +++  F+    N +V
Sbjct:   133 YQLVGFSSAPTSSECVVFTIKDYDPGHVTIRTWSPGQTMWTSMQVESQ--FLDVDHNNVV 190

Query:   213 FCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVI 272
             F NG+FYCL+    + VFDP  R W VL VPPP+CP++   K+W +GKFMV +KGDILVI
Sbjct:   191 FSNGVFYCLNQRNHVAVFDPSLRTWNVLDVPPPRCPDD---KSWNEGKFMVGYKGDILVI 247

Query:   273 YTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLP-GIMRNSVYFSKVRF 331
              T  +++P++FKLD ++  WEE  TL  LT+F S  S +SR  +  G++RNSVYF ++ +
Sbjct:   248 RTYENKDPLVFKLDLTRGIWEEKDTLGSLTIFVSRKSCESRTYVKDGMLRNSVYFPELCY 307

Query:   332 FGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPED 371
               K+ + YS ++ RY+ R+   DWG+Q   +NIWIEPP++
Sbjct:   308 NEKQSVVYSFDEGRYHLREHDLDWGKQLSSDNIWIEPPKN 347
GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2102519 AT3G56470 "AT3G56470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713853 AT4G00893 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139064 AT4G12370 "AT4G12370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139207 AT4G10660 "AT4G10660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010172 AT1G49360 "AT1G49360" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094004 AT3G18720 "AT3G18720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132746 AT4G10700 "AT4G10700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955409 AT4G10695 "AT4G10695" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4515103379 AT4G12382 "AT4G12382" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FVS1FBK23_ARATHNo assigned EC number0.48230.88030.9403yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
pfam1293747 pfam12937, F-box-like, F-box-like 7e-05
pfam0064648 pfam00646, F-box, F-box domain 2e-04
pfam0347853 pfam03478, DUF295, Protein of unknown function (DU 4e-04
>gnl|CDD|221867 pfam12937, F-box-like, F-box-like Back     alignment and domain information 
 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 36 WSELPAELLELIMCHLTLEDNVHASVVCKKWHA 68
           S+LP E+L  I  +L   D +  ++VC++W  
Sbjct: 1  LSDLPDEILLQIFSYLDPRDLLRLALVCRRWRE 33

This is an F-box-like family. Length = 47
>gnl|CDD|201368 pfam00646, F-box, F-box domain Back     alignment and domain information
>gnl|CDD|217586 pfam03478, DUF295, Protein of unknown function (DUF295) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
PLN03215373 ascorbic acid mannose pathway regulator 1; Provisi 100.0
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 99.82
PHA02713557 hypothetical protein; Provisional 99.34
PF0347854 DUF295: Protein of unknown function (DUF295); Inte 99.23
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 99.16
PHA02790480 Kelch-like protein; Provisional 98.97
PHA03098534 kelch-like protein; Provisional 98.96
PLN02153341 epithiospecifier protein 98.91
PHA02713557 hypothetical protein; Provisional 98.85
PHA02790480 Kelch-like protein; Provisional 98.84
PLN02193470 nitrile-specifier protein 98.81
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 98.81
PHA03098534 kelch-like protein; Provisional 98.8
PF1293747 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 98.73
PLN02153341 epithiospecifier protein 98.72
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.66
PLN02193470 nitrile-specifier protein 98.62
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.54
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.48
PF08268129 FBA_3: F-box associated domain; InterPro: IPR01318 98.48
PF0064648 F-box: F-box domain; InterPro: IPR001810 The F-box 98.44
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.38
smart0025641 FBOX A Receptor for Ubiquitination Targets. 98.35
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.35
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.29
PF07734164 FBA_1: F-box associated; InterPro: IPR006527 This 97.9
KOG2120419 consensus SCF ubiquitin ligase, Skp2 component [Po 97.89
KOG4693 392 consensus Uncharacterized conserved protein, conta 97.55
KOG1230 521 consensus Protein containing repeated kelch motifs 97.24
KOG1230 521 consensus Protein containing repeated kelch motifs 97.21
KOG0379482 consensus Kelch repeat-containing proteins [Genera 97.06
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 96.81
KOG4693392 consensus Uncharacterized conserved protein, conta 96.73
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 96.03
COG2706346 3-carboxymuconate cyclase [Carbohydrate transport 94.52
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 94.01
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 93.13
KOG0274537 consensus Cdc4 and related F-box and WD-40 protein 93.07
PF1396450 Kelch_6: Kelch motif 92.91
KOG2997366 consensus F-box protein FBX9 [General function pre 92.26
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 92.02
KOG0281499 consensus Beta-TrCP (transducin repeats containing 91.23
PF1396450 Kelch_6: Kelch motif 91.14
PF1357040 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A. 90.18
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 88.53
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 88.36
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 87.94
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 86.4
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 86.15
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 86.12
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 85.11
KOG2502355 consensus Tub family proteins [General function pr 84.31
smart0056433 PQQ beta-propeller repeat. Beta-propeller repeat o 82.92
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 81.93
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 80.16
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-37  Score=281.99  Aligned_cols=287  Identities=17%  Similarity=0.264  Sum_probs=193.4

Q ss_pred             CCCCCccHHHHHHHHhcCCc-ccceehhccccccccCcccc---CCCCCCceEEEEeec-C---cE--------EEEEcC
Q 017173           34 HDWSELPAELLELIMCHLTL-EDNVHASVVCKKWHAPAISV---RVVNQSPWLMYFPKF-G---NL--------YEFYDP   97 (376)
Q Consensus        34 ~~Ws~LP~dll~~Il~rLp~-~~l~r~r~VCk~Wrs~~~~~---~~~~~~P~l~~~~~~-~---~~--------~~~~~~   97 (376)
                      .+|++||+|||+.|..|||. .|+.|||+||++||+++...   .+..+.||+++.+-. .   ..        ..+  +
T Consensus         2 ~~Ws~Lp~dll~~i~~~l~~~~d~~~~~~vC~sWr~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l   79 (373)
T PLN03215          2 ADWSTLPEELLHMIAGRLFSNVELKRFRSICRSWRSSVSGVGKKNPFRTRPLILFNPINPSETLTDDRSYISRPGAF--L   79 (373)
T ss_pred             CChhhCCHHHHHHHHhhCCcHHHHHHHHhhhhhHHHhcccccccCCcccccccccCcccCCCCccccccccccccce--e
Confidence            57999999999999999984 69999999999999999763   222334777654311 0   00        111  1


Q ss_pred             CCCceEEeecCCCCCCeEEEecCCeEEEEeCC--CCeEEEEcCCCcceecCCCcccc---ee------EEEe-ecC----
Q 017173           98 AQRKTYSLELPELYGSRVCYTKDSWLLLYRPR--THRVFFFNPFTRDMIKLPRFELT---YQ------IVAF-SCA----  161 (376)
Q Consensus        98 ~~~~~~~~~lp~~~~~~~~~s~~G~ll~~~~~--~~~~~l~NP~T~~~~~LP~~~~~---~~------~~~l-~~~----  161 (376)
                      +....++++++.       .++.|||+..+++  ...+.|+||+++..+.+|+....   +.      ...+ ...    
T Consensus        80 s~~~~~r~~~~~-------~~~~~WLik~~~~~~~~~~~Ll~PLsr~~~~~~~~~lnll~f~v~ei~~~y~l~~~~~~~~  152 (373)
T PLN03215         80 SRAAFFRVTLSS-------SPSKGWLIKSDMDVNSGRFHLLNPLSRLPLRHSSESVDLLEFTVSEIREAYQVLDWAKRRE  152 (373)
T ss_pred             eeeEEEEeecCC-------CCCCCcEEEEeccccCCccEecCccccCccCCCCccceeeeeEEEEccceEEEEecccccc
Confidence            122345555442       2569999987654  35799999999999888864221   00      0111 110    


Q ss_pred             --------------CCCC-CeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccCCe
Q 017173          162 --------------PTSS-SCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGW  226 (376)
Q Consensus       162 --------------p~~~-~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~  226 (376)
                                    ..++ ++.|+++....    .+.+++  +++|+.++..      ...+.|+++++|+||+++..|.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~vl~i~~~g----~l~~w~--~~~Wt~l~~~------~~~~~DIi~~kGkfYAvD~~G~  220 (373)
T PLN03215        153 TRPGYQRSALVKVKEGDNHRDGVLGIGRDG----KINYWD--GNVLKALKQM------GYHFSDIIVHKGQTYALDSIGI  220 (373)
T ss_pred             cccceeEEEEEEeecCCCcceEEEEEeecC----cEeeec--CCeeeEccCC------CceeeEEEEECCEEEEEcCCCe
Confidence                          0011 23344443211    233444  5899988742      2568999999999999999999


Q ss_pred             EEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecC----------------CCcEEEEEecCCc
Q 017173          227 LGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCS----------------ENPIIFKLDQSKM  290 (376)
Q Consensus       227 i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~----------------~~~~V~~ld~~~~  290 (376)
                      +.++|.+-+   ..+..++. .+......+....+|||++|+|+||.+...                ..+.||++|.+..
T Consensus       221 l~~i~~~l~---i~~v~~~i-~~~~~~g~~~~~~yLVEs~GdLLmV~R~~~~~~~~~~~~~~~~~~t~~f~VfklD~~~~  296 (373)
T PLN03215        221 VYWINSDLE---FSRFGTSL-DENITDGCWTGDRRFVECCGELYIVERLPKESTWKRKADGFEYSRTVGFKVYKFDDELA  296 (373)
T ss_pred             EEEEecCCc---eeeeccee-cccccCCcccCceeEEEECCEEEEEEEEccCcccccccccccccceeEEEEEEEcCCCC
Confidence            999995422   21111111 000000011134689999999999988531                2389999999999


Q ss_pred             cEEEeeccCCcEEEeeCCccc--ccCCCCccccCeEEEcccccCCceEEEEecCCceeecC
Q 017173          291 AWEEMKTLDGLTLFASFLSSQ--SRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPR  349 (376)
Q Consensus       291 ~W~~v~~lg~~~lFlg~~~s~--~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~~~  349 (376)
                      +|+++++|||++||+|.++++  ++++++|+++|||||+++.  .  ..||+|++++..+.
T Consensus       297 ~WveV~sLgd~aLFlG~~~s~sv~a~e~pG~k~NcIYFtdd~--~--~~v~~~~dg~~~~~  353 (373)
T PLN03215        297 KWMEVKTLGDNAFVMATDTCFSVLAHEFYGCLPNSIYFTEDT--M--PKVFKLDNGNGSSI  353 (373)
T ss_pred             cEEEecccCCeEEEEECCccEEEecCCCCCccCCEEEEECCC--c--ceEEECCCCCccce
Confidence            999999999999999988754  5678899999999999863  2  35999999986655

>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF03478 DUF295: Protein of unknown function (DUF295); InterPro: IPR005174 This family of proteins are found in plants Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>smart00256 FBOX A Receptor for Ubiquitination Targets Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PF07734 FBA_1: F-box associated; InterPro: IPR006527 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG2997 consensus F-box protein FBX9 [General function prediction only] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>KOG2502 consensus Tub family proteins [General function prediction only] Back     alignment and domain information
>smart00564 PQQ beta-propeller repeat Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 5e-06
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 2e-04
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Length = 53 Back     alignment and structure
 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 29 ERLELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWH 67
          E      W  LP ELL  I   L L + +  S VCK+W+
Sbjct: 2  ENFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWY 40
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.33
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.33
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.31
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.31
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.3
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.26
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.05
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.04
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.98
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 98.96
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 98.94
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 98.94
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 98.93
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 98.91
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.74
2e31_A297 FBS1, F-box only protein 2; ubiquitin, SCF, ubiqui 98.63
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.39
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.37
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 98.3
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.26
3v7d_B 464 Cell division control protein 4; WD 40 domain, pho 98.16
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 98.14
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.0
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 97.56
3l2o_B312 F-box only protein 4; small G protein fold, UBL co 97.49
2p1m_B 594 Transport inhibitor response 1 protein; F-BOX, leu 97.2
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 95.41
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 95.19
1l0q_A 391 Surface layer protein; SLP, S-layer, 7-bladed beta 93.93
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 93.92
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 92.07
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 89.82
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 89.47
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 87.64
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 86.5
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 83.94
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 83.9
1n7d_A699 LDL receptor, low-density lipoprotein receptor; fa 83.9
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 83.67
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 82.54
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 80.67
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
Probab=99.33  E-value=2.8e-10  Score=103.54  Aligned_cols=241  Identities=12%  Similarity=0.104  Sum_probs=152.8

Q ss_pred             ceEEEEeec--CcEEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC----CCeEEEEcCCCcceecCCCcccc
Q 017173           80 PWLMYFPKF--GNLYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR----THRVFFFNPFTRDMIKLPRFELT  152 (376)
Q Consensus        80 P~l~~~~~~--~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~----~~~~~l~NP~T~~~~~LP~~~~~  152 (376)
                      ..++++...  .+....||+..++|..++ +|.......+...+|.|++..+.    .+.+.++||.|++|..+|+++..
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~   91 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP   91 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence            456655442  245778999999999875 34322222233457777777652    25789999999999988776543


Q ss_pred             ee--EEEeecCCCCCCeEEEEEeccC---CCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc----
Q 017173          153 YQ--IVAFSCAPTSSSCVVFTVKHIS---PTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL----  223 (376)
Q Consensus       153 ~~--~~~l~~~p~~~~~~v~~i~~~~---~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~----  223 (376)
                      ..  .++.. +    + .++.+....   .....+++|++.+++|+.+...+ .+   .....++.++|++|++..    
T Consensus        92 r~~~~~~~~-~----~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~  161 (306)
T 3ii7_A           92 RDSLAACAA-E----G-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML-TQ---RCSHGMVEANGLIYVCGGSLGN  161 (306)
T ss_dssp             CBSCEEEEE-T----T-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS-SC---CBSCEEEEETTEEEEECCEESC
T ss_pred             ccceeEEEE-C----C-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc-CC---cceeEEEEECCEEEEECCCCCC
Confidence            21  12211 1    2 233332111   11235789999999999886432 22   345567888999999864    


Q ss_pred             ------CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC--cEEEEEecCCccEEEe
Q 017173          224 ------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEM  295 (376)
Q Consensus       224 ------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v  295 (376)
                            ...+.+||+.++.|+.+. +.|. +.        ....++..+|+|++++......  -.|+.+|.++.+|+++
T Consensus       162 ~~~~~~~~~~~~yd~~~~~W~~~~-~~p~-~r--------~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~  231 (306)
T 3ii7_A          162 NVSGRVLNSCEVYDPATETWTELC-PMIE-AR--------KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV  231 (306)
T ss_dssp             TTTCEECCCEEEEETTTTEEEEEC-CCSS-CC--------BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred             CCcccccceEEEeCCCCCeEEECC-Cccc-hh--------hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence                  345899999999998764 2221 11        2234566789999997654432  3578889999999999


Q ss_pred             eccCCcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCceeecCC
Q 017173          296 KTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSRYYPRK  350 (376)
Q Consensus       296 ~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~~~~~~  350 (376)
                      ..++....    ..++      ...+|.||+.....   ....+.+||+++++|....
T Consensus       232 ~~~p~~r~----~~~~------~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~  279 (306)
T 3ii7_A          232 SPMPWKGV----TVKC------AAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS  279 (306)
T ss_dssp             CCCSCCBS----CCEE------EEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred             CCCCCCcc----ceeE------EEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence            87764210    0011      12467888875421   2356789999999998653
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Back     alignment and structure
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1fs1a141 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [ 2e-05
d1nexb1100 a.158.1.1 (B:270-369) Cdc4 F-box and linker domain 0.001
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 41 Back     information, alignment and structure

class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: Skp2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 36 WSELPAELLELIMCHLTLEDNVHASVVCKKWH 67
          W  LP ELL  I   L L + +  S VCK+W+
Sbjct: 1  WDSLPDELLLGIFSCLCLPELLKVSGVCKRWY 32
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 100 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1fs1a141 Skp2 {Human (Homo sapiens) [TaxId: 9606]} 99.1
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.59
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.23
d1nexb1100 Cdc4 F-box and linker domains {Baker's yeast (Sacc 98.19
d2ovrb1102 F-box/WD repeat-containing protein 7, FBXW7 {Human 98.17
d1p22a1118 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 97.66
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 97.54
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 97.44
d1kv9a2 560 Quinoprotein alcohol dehydrogenase, N-terminal dom 86.72
d1kb0a2 573 Quinoprotein alcohol dehydrogenase, N-terminal dom 86.15
d1qksa2 432 C-terminal (heme d1) domain of cytochrome cd1-nitr 80.57
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: Skp2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=6.1e-12  Score=76.14  Aligned_cols=38  Identities=39%  Similarity=0.634  Sum_probs=36.1

Q ss_pred             CCCccHHHHHHHHhcCCcccceehhccccccccCcccc
Q 017173           36 WSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISV   73 (376)
Q Consensus        36 Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~   73 (376)
                      |..||+|++.+||++||.+|+.+++.|||+|+.++.++
T Consensus         1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~~~~   38 (41)
T d1fs1a1           1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE   38 (41)
T ss_dssp             CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCG
T ss_pred             CCcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999999999999998765
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} Back     information, alignment and structure
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure