Citrus Sinensis ID: 017197

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
MMMLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPLPA
cccccccHHccccccccccccEEccccccccccccEEEEccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEcccccEEEEEEEcccccccEEEEccccccccccHHHHHHHHHHccccccEEEEEccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEcccccEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccc
ccccHHccccccccccccccEEEcccccccccHHHHHHHcccHHHHHccEcccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccEEEEEEEEccEEEEEEcccccEEEEEEccccccccEEEEEcccccccccHHHHHHHHHHccccccEEEEEcccEEEcEEEEEEHccccHHHcccHccccccHHHccccccccccEEcccccEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccEEEEEEEEccccccccccccccccccccccccHHHccccccccccHHHHHHHHcc
MMMLRSCYRclgrrgggdglmwhsdlkphasgdySIAVVQANscledqsqvftspsatyvgvydghggpeasrfvnkhLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVlpvrpqiasvgscclvgaisNDVLYVANLGdsravlgrrvsddsKVKVAAERLstdhnvgvEEVRKEVealhpddshiVVYARGVWRIKGIIQVSrsigdvylkkpdfyrdpvfqqfgnpiplkrpamtaepsilirklrpQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDhhqkgssnsrskhnaigctsapvdifslnadeaeddvqhmlhplpa
MMMLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGdsravlgrrvsddskvkvaaerlstdhnvgveevrkevealhpddshiVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQqfgnpiplkrpAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEaarkrevgykeikklkrgirrhfhDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPLPA
MMMLRSCYRClgrrgggdglMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPLPA
****RSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRV******************VGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDH***************GCTSAPVDIF********************
***L********************DLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRA*I***L***ALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIY************************************DDVQHMLHP***
MMMLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHH***********NAIGCTSAPVDIFSLNADEAEDDVQHMLHPLPA
*MMLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHH********************************DD**********
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MMMLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPLPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query375 2.2.26 [Sep-21-2011]
O81760380 Probable protein phosphat yes no 0.957 0.944 0.731 1e-156
Q2QN36392 Probable protein phosphat yes no 0.922 0.882 0.692 1e-139
Q94H98380 Probable protein phosphat no no 0.965 0.952 0.587 1e-129
Q5MFV5380 Probable protein phosphat N/A no 0.965 0.952 0.587 1e-129
Q8H063392 Probable protein phosphat no no 0.933 0.892 0.600 1e-119
Q9SD12379 Probable protein phosphat no no 0.850 0.841 0.556 1e-108
Q7XHN8377 Probable protein phosphat no no 0.866 0.862 0.573 1e-108
Q7XUC5388 Probable protein phosphat no no 0.842 0.814 0.589 1e-107
Q9FKX4385 Probable protein phosphat no no 0.837 0.815 0.572 1e-107
Q84JD5393 Probable protein phosphat no no 0.829 0.791 0.576 1e-104
>sp|O81760|P2C63_ARATH Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1 Back     alignment and function desciption
 Score =  553 bits (1424), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/369 (73%), Positives = 312/369 (84%), Gaps = 10/369 (2%)

Query: 3   MLRSCYRCLGRRGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGV 62
           + R   RCLG R  GDGL+W S+L+PHA GDYSIAVVQANS LEDQSQVFTS SATYVGV
Sbjct: 5   LARPLERCLGSRASGDGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSSATYVGV 64

Query: 63  YDGHGGPEASRFVNKHLFPYLHR-------LSAEVIKKAFHATEEEFLRLVKRVLPVRPQ 115
           YDGHGGPEASRFVN+HLFPY+H+       LS +VIKKAF  TEEEF  +VKR LP++PQ
Sbjct: 65  YDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFCGMVKRSLPMKPQ 124

Query: 116 IASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSD-DSKVKVAAERLSTDHNVGVEEVR 174
           +A+VGSCCLVGAISND LYVANLGDSRAVLG  VS  DS     AERLSTDHNV VEEVR
Sbjct: 125 MATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDHNVAVEEVR 184

Query: 175 KEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKR 234
           KEV+AL+PDDS IV+Y RGVWRIKGIIQVSRSIGDVYLKKP++YRDP+FQ+ GNPIPL+R
Sbjct: 185 KEVKALNPDDSQIVLYTRGVWRIKGIIQVSRSIGDVYLKKPEYYRDPIFQRHGNPIPLRR 244

Query: 235 PAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQE 294
           PAMTAEPSI++RKL+PQDLFLIFASDGLWE L+DE AVEIV K+PR GIA+RLVRAAL+E
Sbjct: 245 PAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEE 304

Query: 295 AARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDI 354
           AA+KRE+ Y +IKK+ +GIRRHFHDDI+VIV+YLD ++  SSNS+      G  +AP DI
Sbjct: 305 AAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLVKQ--GGITAPPDI 362

Query: 355 FSLNADEAE 363
           +SL++DEAE
Sbjct: 363 YSLHSDEAE 371

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1 Back     alignment and function description
>sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1 Back     alignment and function description
>sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2 Back     alignment and function description
>sp|Q8H063|P2C29_ORYSJ Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q7XHN8|P2C61_ORYSJ Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=2 SV=2 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q84JD5|P2C68_ARATH Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
224060690381 predicted protein [Populus trichocarpa] 0.968 0.952 0.827 1e-174
255573107387 protein phosphatase 2c, putative [Ricinu 0.970 0.940 0.804 1e-173
225428926381 PREDICTED: probable protein phosphatase 0.978 0.963 0.793 1e-172
296083084380 unnamed protein product [Vitis vinifera] 0.976 0.963 0.792 1e-171
449532242382 PREDICTED: probable protein phosphatase 0.970 0.952 0.779 1e-168
224105669382 predicted protein [Populus trichocarpa] 0.968 0.950 0.809 1e-168
147810867 688 hypothetical protein VITISV_034287 [Viti 0.96 0.523 0.761 1e-165
356536129378 PREDICTED: probable protein phosphatase 0.96 0.952 0.789 1e-165
449438335473 PREDICTED: probable protein phosphatase 0.930 0.737 0.790 1e-164
356575706373 PREDICTED: probable protein phosphatase 0.941 0.946 0.776 1e-160
>gi|224060690|ref|XP_002300254.1| predicted protein [Populus trichocarpa] gi|222847512|gb|EEE85059.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/377 (82%), Positives = 338/377 (89%), Gaps = 14/377 (3%)

Query: 3   MLRSCYR----CLGR--RGGGDGLMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPS 56
           MLRSCYR    C GR   GGGDGLMWH+DLK HASGDYSIAVVQANS LEDQSQVFTSPS
Sbjct: 1   MLRSCYRPLERCFGRVAGGGGDGLMWHADLKQHASGDYSIAVVQANSNLEDQSQVFTSPS 60

Query: 57  ATYVGVYDGHGGPEASRFVNKHLFPYLHR-------LSAEVIKKAFHATEEEFLRLVKRV 109
           ATYVGVYDGHGGPEASRFVNKH+FP++H+       LSA+VIKKAF+ATEEEF  LVKR 
Sbjct: 61  ATYVGVYDGHGGPEASRFVNKHMFPFMHKFAKEHGGLSADVIKKAFNATEEEFCHLVKRS 120

Query: 110 LPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVG 169
           LP++PQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRV +D K  V AERLSTDHNV 
Sbjct: 121 LPLKPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVDEDKKKTVVAERLSTDHNVA 180

Query: 170 VEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNP 229
           VEEVRKEVEALHPDDSHIVVY RGVWRIKGIIQVSRSIGDVYLKKP+F RDP++QQFGNP
Sbjct: 181 VEEVRKEVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIYQQFGNP 240

Query: 230 IPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVR 289
           IPLKRP MTAEPSI+ RKLR +DLFLIFASDGLWEQLTDEAAVEIV KNPRAGIAKRLVR
Sbjct: 241 IPLKRPVMTAEPSIVFRKLRSEDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVR 300

Query: 290 AALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTS 349
           AA+QEAA+KRE+ Y +IKK+++GIRRHFHDDITVIVIYLD HQKGSSN R K+NAIGCTS
Sbjct: 301 AAIQEAAKKREMRYNDIKKIEKGIRRHFHDDITVIVIYLD-HQKGSSNGRLKNNAIGCTS 359

Query: 350 APVDIFSLNADEAEDDV 366
           APVDIFS +AD+AE D+
Sbjct: 360 APVDIFSRDADQAEADM 376

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255573107|ref|XP_002527483.1| protein phosphatase 2c, putative [Ricinus communis] gi|223533123|gb|EEF34881.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225428926|ref|XP_002262649.1| PREDICTED: probable protein phosphatase 2C 63-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083084|emb|CBI22488.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449532242|ref|XP_004173091.1| PREDICTED: probable protein phosphatase 2C 63-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224105669|ref|XP_002313894.1| predicted protein [Populus trichocarpa] gi|222850302|gb|EEE87849.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147810867|emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536129|ref|XP_003536592.1| PREDICTED: probable protein phosphatase 2C 63-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449438335|ref|XP_004136944.1| PREDICTED: probable protein phosphatase 2C 63-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356575706|ref|XP_003555979.1| PREDICTED: probable protein phosphatase 2C 63-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.957 0.944 0.715 1.5e-136
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.834 0.825 0.554 9.7e-96
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.818 0.797 0.575 8.7e-95
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.826 0.788 0.575 1.4e-94
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.845 0.823 0.547 2.4e-92
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.869 0.848 0.529 5.7e-91
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.877 0.822 0.529 2.5e-90
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.816 0.796 0.547 7.5e-89
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.816 0.827 0.504 4.4e-84
TAIR|locus:2053265654 PLL4 "poltergeist like 4" [Ara 0.448 0.256 0.322 3.6e-33
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1337 (475.7 bits), Expect = 1.5e-136, P = 1.5e-136
 Identities = 264/369 (71%), Positives = 305/369 (82%)

Query:     3 MLRSCYRCXXXXXXXXXXMWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGV 62
             + R   RC          +W S+L+PHA GDYSIAVVQANS LEDQSQVFTS SATYVGV
Sbjct:     5 LARPLERCLGSRASGDGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSSATYVGV 64

Query:    63 YDGHGGPEASRFVNKHLFPYLHR-------LSAEVIKKAFHATEEEFLRLVKRVLPVRPQ 115
             YDGHGGPEASRFVN+HLFPY+H+       LS +VIKKAF  TEEEF  +VKR LP++PQ
Sbjct:    65 YDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFCGMVKRSLPMKPQ 124

Query:   116 IASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSD-DSKVKVAAERLSTDHNVGVEEVR 174
             +A+VGSCCLVGAISND LYVANLGDSRAVLG  VS  DS     AERLSTDHNV VEEVR
Sbjct:   125 MATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDHNVAVEEVR 184

Query:   175 KEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKR 234
             KEV+AL+PDDS IV+Y RGVWRIKGIIQVSRSIGDVYLKKP++YRDP+FQ+ GNPIPL+R
Sbjct:   185 KEVKALNPDDSQIVLYTRGVWRIKGIIQVSRSIGDVYLKKPEYYRDPIFQRHGNPIPLRR 244

Query:   235 PAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQE 294
             PAMTAEPSI++RKL+PQDLFLIFASDGLWE L+DE AVEIV K+PR GIA+RLVRAAL+E
Sbjct:   245 PAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEE 304

Query:   295 AARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDI 354
             AA+KRE+ Y +IKK+ +GIRRHFHDDI+VIV+YLD ++  SSNS+      G T AP DI
Sbjct:   305 AAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLVKQG-GIT-APPDI 362

Query:   355 FSLNADEAE 363
             +SL++DEAE
Sbjct:   363 YSLHSDEAE 371
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053265 PLL4 "poltergeist like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5MFV5P2C34_ORYSI3, ., 1, ., 3, ., 1, 60.58770.96530.9526N/Ano
O81760P2C63_ARATH3, ., 1, ., 3, ., 1, 60.73170.95730.9447yesno
Q2QN36P2C78_ORYSJ3, ., 1, ., 3, ., 1, 60.69250.92260.8826yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.I.4026.1
hypothetical protein (356 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-58
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-57
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-36
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 7e-24
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 9e-17
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-09
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  189 bits (481), Expect = 4e-58
 Identities = 90/307 (29%), Positives = 126/307 (41%), Gaps = 80/307 (26%)

Query: 40  QANSCLEDQSQVFT---SPSATYVGVYDGHGGPEASRFVNKHLFPYLHRL---------- 86
                 ED   +     +      GV+DGHGG  A  F +K L   L             
Sbjct: 10  GDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEE 69

Query: 87  -SAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVL 145
              E ++KAF   +EE L   +      P  A  G+  +V  I  + LYVAN+GDSRAVL
Sbjct: 70  DIEEALRKAFLRADEEILEEAQD----EPDDARSGTTAVVALIRGNKLYVANVGDSRAVL 125

Query: 146 GRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSR 205
            R           A +L+ DH    EE R+ +E      S          R+ G++ V+R
Sbjct: 126 CRNGE--------AVQLTKDHKPVNEEERERIEKAGGRVS--------NGRVPGVLAVTR 169

Query: 206 SIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQ 265
           ++GD  LK                     P ++AEP + + KL   D FLI ASDGLW+ 
Sbjct: 170 ALGDFDLK---------------------PGVSAEPDVTVVKLTEDDDFLILASDGLWDV 208

Query: 266 LTDEAAVEIVCKNPRAG----IAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDI 321
           L+++ AV+IV            A+ LV  A                     +RR  HD+I
Sbjct: 209 LSNQEAVDIVRSELAKEDLQEAAQELVDLA---------------------LRRGSHDNI 247

Query: 322 TVIVIYL 328
           TV+V+ L
Sbjct: 248 TVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 375
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.79
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.75
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.73
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.55
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.35
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.45
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-48  Score=373.56  Aligned_cols=285  Identities=50%  Similarity=0.823  Sum_probs=257.5

Q ss_pred             CCCCceeeccCCCCCcCceeeEEecCC-------cccCCceeee--cCCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH-
Q 017197           16 GGDGLMWHSDLKPHASGDYSIAVVQAN-------SCLEDQSQVF--TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHR-   85 (375)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~r-------~~~eD~~~~~--~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~-   85 (375)
                      +.+++.|..+...+..+++++++.+.+       ...||+..+.  ....+.|+||||||||.+++++++++|..++.. 
T Consensus        49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~  128 (390)
T KOG0700|consen   49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE  128 (390)
T ss_pred             CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence            457799999999999999999888774       4556666544  367889999999999999999999999998881 


Q ss_pred             ---------------------------------------hhHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccccceEEEE
Q 017197           86 ---------------------------------------LSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVG  126 (375)
Q Consensus        86 ---------------------------------------~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~  126 (375)
                                                             ...++|.+||.++++.|.+...+.+...+....+|+||+|+
T Consensus       129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~  208 (390)
T KOG0700|consen  129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG  208 (390)
T ss_pred             hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence                                                   44678999999999999999999999999999999999999


Q ss_pred             EEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEeecCeeeecCccccccc
Q 017197          127 AISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRS  206 (375)
Q Consensus       127 ~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRa  206 (375)
                      ++.++.|||||+||||++|.+....++  .+.+.|||+||+.+++.|+.||...||.....++...  ||+.|.|.+|||
T Consensus       209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~--~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRA  284 (390)
T KOG0700|consen  209 LIKGGDLYVANVGDSRAVLGVVENNGS--WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRA  284 (390)
T ss_pred             EEeCCeEEEEecCcchhhhceecCCCC--eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeee
Confidence            999999999999999999987774332  4789999999999999999999999999988888876  899999999999


Q ss_pred             cCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHHHHHHHHHc-----CCcc
Q 017197          207 IGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCK-----NPRA  281 (375)
Q Consensus       207 lGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~ei~~iv~~-----~~~~  281 (375)
                      |||.++|++.+..+++.+.|.-+.++++|+|+++|.++.++|.|.|+||||+|||||++|+++|+++++..     .+.+
T Consensus       285 fGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~  364 (390)
T KOG0700|consen  285 FGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDG  364 (390)
T ss_pred             ccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCC
Confidence            99999999999989999999999999999999999999999999999999999999999999999999998     6778


Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhH
Q 017197          282 GIAKRLVRAALQEAARKREVGYK  304 (375)
Q Consensus       282 ~~a~~Lv~~A~~~~~~~~~~~~~  304 (375)
                      +.|++|++.|+..+++.+.-.|+
T Consensus       365 ~~A~hLIr~aL~~aakk~~~r~s  387 (390)
T KOG0700|consen  365 NPATHLIRHALGRAAKKRGMRLS  387 (390)
T ss_pred             CHHHHHHHHHHhhhhhhccccHh
Confidence            99999999999999875544444

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-18
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-18
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-18
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 9e-18
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-17
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-15
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 3e-12
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 4e-12
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 4e-12
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 4e-12
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 5e-12
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 5e-12
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 8e-12
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-08
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-08
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 8e-07
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-06
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-06
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-04
2j4o_A401 Structure Of Tab1 Length = 401 3e-04
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure 
Iteration: 1

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 56  SATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAE----------VIKKAFHATEEEFLRL 105
           +A + GVYDGHGG + + +  + +   L    A+           ++K   A    FLR+
Sbjct: 54  AAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRV 113
Query: 106 VKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTD 165
              +  V P+  +VGS  +V  +    ++VAN GDSRAVL R  +        A  LS D
Sbjct: 114 DSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------ALPLSVD 163
Query: 166 HNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQ 225
           H    E+    +EA        V+   G  R+ G++ +SRSIGD YLK            
Sbjct: 164 HKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIGDRYLK------------ 206
Query: 226 FGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIV--------CK 277
                    P++  +P +   K   +D  LI ASDG+W+ +TDE A E+          K
Sbjct: 207 ---------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKK 257
Query: 278 NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQK 333
           N  AG A  L     +E      +   E    K  I+R   D+I+V+V+ L   +K
Sbjct: 258 NAVAGDASLLADERRKEGKDPAAMSAAEYLS-KLAIQRGSKDNISVVVVDLKPRRK 312
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-73
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-72
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-06
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-49
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-48
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-48
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-47
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-47
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 7e-47
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-45
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-45
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-44
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-37
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 8e-29
1txo_A237 Putative bacterial enzyme; serine/threonine protei 6e-13
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 9e-11
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 9e-11
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-10
3rnr_A211 Stage II sporulation E family protein; structural 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
 Score =  233 bits (595), Expect = 1e-73
 Identities = 77/365 (21%), Positives = 120/365 (32%), Gaps = 66/365 (18%)

Query: 40  QANSCLEDQSQVFTSPSAT-YVGVYDGHGGPEASRFVNKHLFPYLHRLSA---------- 88
             +   ED    F S +     GV++G+ G   + FV + L   L               
Sbjct: 44  TESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVR 103

Query: 89  EVIKKAFHATEEEFLRLVKRVLPVRPQIASV----------------------------- 119
            V+ +AF   E  FL  +   L  +  + S                              
Sbjct: 104 RVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREIS 163

Query: 120 -GSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVE 178
            G+  +V  + N+ LYVAN+G +RA+L +   D  +      +L+ DH    E+    + 
Sbjct: 164 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQ----VTQLNVDHTTENEDELFRLS 219

Query: 179 ALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMT 238
            L  D   I      V  I G  + +R IGD  +K      D            K   + 
Sbjct: 220 QLGLDAGKIK----QVGIICG-QESTRRIGDYKVKYGYTDIDL-------LSAAKSKPII 267

Query: 239 AEPSIL-IRKLRPQDLFLIFASDGLWEQLTDEAAVEIV----CKNPRAGIAKRLVRAALQ 293
           AEP I   + L     FL+  S+GL++ L                     AK+    A+ 
Sbjct: 268 AEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVA 327

Query: 294 EAARKREVGYKEIKKLKRGIRRHF---HDDITVIVIYLDHHQKGSSNSRSKHNAI-GCTS 349
           +A   R            G R  F   H+D+T++V    +     S          G   
Sbjct: 328 QAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLGEMSQPTPSPAPAAGGRV 387

Query: 350 APVDI 354
            PV +
Sbjct: 388 YPVSV 392
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.81
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.78
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.67
3f79_A255 Probable two-component response regulator; adaptor 99.62
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.15
3eq2_A394 Probable two-component response regulator; adaptor 98.36
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=7.4e-45  Score=366.88  Aligned_cols=295  Identities=30%  Similarity=0.434  Sum_probs=207.3

Q ss_pred             CceeeEEecCCcccCCceeeec--CCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH------------------------
Q 017197           32 GDYSIAVVQANSCLEDQSQVFT--SPSATYVGVYDGHGGPEASRFVNKHLFPYLHR------------------------   85 (375)
Q Consensus        32 ~~~~~~~~~~r~~~eD~~~~~~--~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~------------------------   85 (375)
                      ..|.....+.|..|||++.+..  ..++.||||||||||+.+|++++++++..|..                        
T Consensus        39 ~~~~s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~  118 (467)
T 2pnq_A           39 LGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPI  118 (467)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCC
T ss_pred             EEEEeeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccc
Confidence            3455555566999999997763  45788999999999999999999999887642                        


Q ss_pred             -----------------------------------------hhHHHHHHHHHHHHHHHHHHHHHhCC------CCCCccc
Q 017197           86 -----------------------------------------LSAEVIKKAFHATEEEFLRLVKRVLP------VRPQIAS  118 (375)
Q Consensus        86 -----------------------------------------~~~~~l~~a~~~~~~~l~~~~~~~~~------~~~~~~~  118 (375)
                                                               ...++|+++|..+++.|.+.......      .......
T Consensus       119 l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  198 (467)
T 2pnq_A          119 LQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAF  198 (467)
T ss_dssp             EEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCC
Confidence                                                     23456888999999988775432100      0012245


Q ss_pred             ccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEeecCeeeec
Q 017197          119 VGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIK  198 (375)
Q Consensus       119 ~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~  198 (375)
                      +|||++++++.++.||||||||||+|++|.+. +|  .+.+++||.||++.++.|++||.+.||.........  ..|+.
T Consensus       199 ~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~-~g--~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~--~~Rv~  273 (467)
T 2pnq_A          199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEE-DG--SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVK--QDRLL  273 (467)
T ss_dssp             SEECEEEEEEETTEEEEEEESSCEEEEEEECT-TS--CEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBS--SSSBT
T ss_pred             CcceEEEEEEECCEEEEEECCCceEEEEEecC-CC--cEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEe--cCccc
Confidence            89999999999999999999999999999731 11  467999999999999999999999986421100001  12889


Q ss_pred             CccccccccCcccccCCCCCC------------CccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCC
Q 017197          199 GIIQVSRSIGDVYLKKPDFYR------------DPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQL  266 (375)
Q Consensus       199 g~l~vtRalGd~~~k~~~~~~------------~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l  266 (375)
                      |.+++||||||..+|......            ...+..+..+...++|+|+++|++..+.|.++|.|||||||||||+|
T Consensus       274 G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~l  353 (467)
T 2pnq_A          274 GLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETM  353 (467)
T ss_dssp             TTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTS
T ss_pred             cccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccC
Confidence            999999999999887531000            00011222334456789999999999999999999999999999999


Q ss_pred             CHHHHHHHHHcC-------Cc------------------------------chHHHHHHHHHHHHH--HHhhhhhhHHHH
Q 017197          267 TDEAAVEIVCKN-------PR------------------------------AGIAKRLVRAALQEA--ARKREVGYKEIK  307 (375)
Q Consensus       267 ~~~ei~~iv~~~-------~~------------------------------~~~a~~Lv~~A~~~~--~~~~~~~~~~~~  307 (375)
                      +++|+++++...       .+                              +++|..|+..|+..+  +..+.-..+.++
T Consensus       354 s~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll  433 (467)
T 2pnq_A          354 HRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKML  433 (467)
T ss_dssp             CHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC----------------
T ss_pred             ChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhh
Confidence            999999998753       11                              567899999999875  323334456788


Q ss_pred             hhhccCCCCCCCCeEEEEEEcCCC
Q 017197          308 KLKRGIRRHFHDDITVIVIYLDHH  331 (375)
Q Consensus       308 ~~~~~~~~~~~DNiTvIvv~l~~~  331 (375)
                      ..+.+.+|.++||||||||+|+.+
T Consensus       434 ~~~~~~~R~~~DdITViVv~~~~~  457 (467)
T 2pnq_A          434 SLPEELARMYRDDITIIVVQFNSH  457 (467)
T ss_dssp             ---------CCSCEEEEEEEECHH
T ss_pred             cCCccccccCCCCcEEEEEEeCch
Confidence            999999999999999999999753
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 375
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-24
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-14
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (245), Expect = 3e-24
 Identities = 53/294 (18%), Positives = 95/294 (32%), Gaps = 63/294 (21%)

Query: 55  PSATYVGVYDGHGGPEASRFVNKHLFPYLHR----------LSAEVIKKAFHATEEEFLR 104
            S ++  VYDGH G + +++  +HL  ++             S E +K        E   
Sbjct: 50  ESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDE 109

Query: 105 LVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLST 164
            ++ +   +      GS  +   IS    Y  N GDSR +L R               + 
Sbjct: 110 HMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV--------HFFTQ 161

Query: 165 DHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQ 224
           DH       ++ ++            +  + R+ G + VSR++GD   K           
Sbjct: 162 DHKPSNPLEKERIQNAGG--------SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQL 213

Query: 225 QFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAG-- 282
               P               I +    D F+I A DG+W+ + +E   + V         
Sbjct: 214 VSPEPEVHD-----------IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD 262

Query: 283 ---IAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQK 333
              +   +V   L                      +   D+++VI+I   +  K
Sbjct: 263 LEKVCNEVVDTCL---------------------YKGSRDNMSVILICFPNAPK 295
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=364.26  Aligned_cols=247  Identities=23%  Similarity=0.375  Sum_probs=207.6

Q ss_pred             ceeeEEecC-CcccCCceeeec-----CCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH--------------hhHHHHH
Q 017197           33 DYSIAVVQA-NSCLEDQSQVFT-----SPSATYVGVYDGHGGPEASRFVNKHLFPYLHR--------------LSAEVIK   92 (375)
Q Consensus        33 ~~~~~~~~~-r~~~eD~~~~~~-----~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~--------------~~~~~l~   92 (375)
                      .|++++++| |+.|||+|.+..     .++..||||||||||+.+|+++++++++.|.+              ...+.|+
T Consensus        22 ~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~  101 (295)
T d1a6qa2          22 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIR  101 (295)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHH
T ss_pred             EEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHH
Confidence            578888887 899999997762     23568999999999999999999999999875              3456678


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHH
Q 017197           93 KAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEE  172 (375)
Q Consensus        93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~  172 (375)
                      ++|..+++.+......    ......+|||++++++.++++|+|||||||+|+++++        .+++||.||++.++.
T Consensus       102 ~a~~~~~~~~~~~~~~----~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~--------~~~~lT~dH~~~~~~  169 (295)
T d1a6qa2         102 TGFLEIDEHMRVMSEK----KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR--------KVHFFTQDHKPSNPL  169 (295)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT--------EEEEECCCCCTTSHH
T ss_pred             HHHHHHHHHHhhhhhh----ccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc--------cceeeccccCcccHH
Confidence            8888888777665443    2334568999999999999999999999999999998        999999999999999


Q ss_pred             HHHHHHhhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcC-CC
Q 017197          173 VRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLR-PQ  251 (375)
Q Consensus       173 e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~-~~  251 (375)
                      |+.|+...+    +.+..    .|++|.+++||||||..+|....            .+.+.++|+++|++..+.+. ++
T Consensus       170 E~~Ri~~~g----g~v~~----~r~~g~l~~tRa~Gd~~~k~~~~------------~~~~~~~v~~~Pdi~~~~~~~~~  229 (295)
T d1a6qa2         170 EKERIQNAG----GSVMI----QRVNGSLAVSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSEED  229 (295)
T ss_dssp             HHHHHHHTT----CCEET----TEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCTTT
T ss_pred             HHhhHhhcC----Ccccc----cccCCceeeeeccCcHHhhhccc------------cCcccccccccccceEEEeeccc
Confidence            999999985    33332    38999999999999999976542            33456789999999999986 55


Q ss_pred             CeEEEEeccCCccCCCHHHHHHHHHc-----CCcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEE
Q 017197          252 DLFLIFASDGLWEQLTDEAAVEIVCK-----NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVI  326 (375)
Q Consensus       252 D~~LvLaSDGlwd~l~~~ei~~iv~~-----~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv  326 (375)
                      |.|||||||||||+|+++|++++++.     .+++.+|.+|++.|+.                     +++.||||||||
T Consensus       230 ~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~---------------------~gs~DNiTvivv  288 (295)
T d1a6qa2         230 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY---------------------KGSRDNMSVILI  288 (295)
T ss_dssp             EEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH---------------------TTCCSCEEEEEE
T ss_pred             ceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh---------------------cCCCCCeEEEEE
Confidence            77999999999999999999999875     3567789999999877                     557999999999


Q ss_pred             EcCCCC
Q 017197          327 YLDHHQ  332 (375)
Q Consensus       327 ~l~~~~  332 (375)
                      +|+..+
T Consensus       289 ~~~~~~  294 (295)
T d1a6qa2         289 CFPNAP  294 (295)
T ss_dssp             ECTTSC
T ss_pred             eccCCC
Confidence            998765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure