Citrus Sinensis ID: 017258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
Protein Sequence
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISESRLAGRMAF
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccccHHHHHHHHHcccccccccccccccccccHHEEEEEcccccccccccccccccccEEEEccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEccccccHHHHHHHHHHHccccccHccccccccccHEEEHHHHHHccHcccccccccccccEEEEEccccccHHHHHHHHHHHHccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHccccccEcccccccccHHHHHcccccHHHHcccccc
Coil and Loop (DISEMBL)
mgkkkkrvssKVWCYycdrefddEKILVQHQKakhfkchvchkklstaggMAIHVLQVHKenvtkvpnakpgrestdieiygmqgippdvlaahygeeeeevpskmakvdtsfpqlvggvvpgqlgvsyppqstlgmmqpiyssavpvppagwpvpprpqpwypqhaavsipppaavgyaqqplfpvqnvrpplasstspalqpspvvppgmpsstppvtvsqplfpvvnnnttsqsslfsapipstsialsssaeikgsvdahssantsvtnsyhvpsmqggtlsnshsyasgpntggpsigpppviankapatqpavnEVYLVWEDEAMSMEERRMSSVKyqvhdetsqmssIDAAIDRRISESRLAGRMAF
Flexible Loop (DISEMBL)
mgkkkkrvsskvWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHkenvtkvpnakpgrESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKyqvhdetsqmssidaaiDRRISESRLAGRMAF
Low Complexity Region (SEG)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFpqlvggvvpgqlgvSYPPQSTLGMMQPIYSSavpvppagwpvpprpqpwypqHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALqpspvvppgmpsstppvtvsqpLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISESRLAGRMAF
Disordered region (IsUnstruct)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*************IEIYGMQGIPPDVLAAHY*****************FPQLVGGVVPGQLGVSYP****LGMMQPIYSSAVPV***GW********WYPQHAAVSI***AAVGYAQ**L*************************************************************************************************************************************AVNEVYLVWE***********************************************
Disordered Region (DISOPRED)
*********SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI**********************************************************************************************************************************************************************************************************************************************VWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISESRLAGRMA*
Disordered Region (DISEMBL)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG**********AKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVR************PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISESRLAGRMAF
Disordered Region (DISPRO)
********SSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE****************************SYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNN**TS*SSLFSAPIP*************************************************************************VNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRIS**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISESRLAGRMAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	374	2.2.26 [Sep-21-2011]
O43670	478	Zinc finger protein 207 O	yes	no	0.229	0.179	0.678	1e-33
Q5R8K4	494	Zinc finger protein 207 O	yes	no	0.229	0.174	0.678	5e-33

>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1

 Score =  144 bits (362), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Homo sapiens (taxid: 9606)

>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1

 Score =  142 bits (358), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
224074127	385	predicted protein [Populus trichocarpa]	0.986	0.958	0.753	1e-160
357521467	374	Zinc finger protein [Medicago truncatula	0.981	0.981	0.742	1e-150
297738020	375	unnamed protein product [Vitis vinifera]	0.997	0.994	0.742	1e-148
356524640	371	PREDICTED: uncharacterized protein LOC10	0.986	0.994	0.763	1e-146
225423609	362	PREDICTED: uncharacterized protein LOC10	0.962	0.994	0.723	1e-145
356513020	371	PREDICTED: uncharacterized protein LOC10	0.986	0.994	0.75	1e-143
224138544	363	predicted protein [Populus trichocarpa]	0.967	0.997	0.752	1e-142
356524642	359	PREDICTED: uncharacterized protein LOC10	0.957	0.997	0.752	1e-141
449433517	372	PREDICTED: uncharacterized protein LOC10	0.991	0.997	0.752	1e-140
357521469	465	Zinc finger protein [Medicago truncatula	0.925	0.744	0.730	1e-137

>gi|224074127|ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|222841695|gb|EEE79242.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 294/390 (75%), Positives = 315/390 (80%), Gaps = 21/390 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKR +SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRAASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE+E PSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEDENPSKAAKVDIPSAQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQP---------------IYSSAVPVPPAGWPVPPRPQPWYPQ 165
           VPG LG  YPP+  L  MQP               +Y+SAVP P AGWPVPPR Q W PQ
Sbjct: 121 VPGPLGAGYPPRP-LAAMQPMSGPCTLGPVKLWNYLYNSAVPAPHAGWPVPPRSQHWLPQ 179

Query: 166 HAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPL 225
           H AVSIPPPA + Y QQPLFPVQNVRPP+ S+ +PAL PS V PPG+PSSTP  +VSQPL
Sbjct: 180 HPAVSIPPPAPITYTQQPLFPVQNVRPPVPSTMTPALIPSQVTPPGLPSSTP--SVSQPL 237

Query: 226 FPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQG-GT 284
           FPV  NN   QSS FSAP PSTS+  SS AE++GS++ H   NTS+T  Y   S    GT
Sbjct: 238 FPV--NNNLPQSSTFSAPFPSTSLLPSSPAEVRGSMNVHLGVNTSMTTGYLTQSASASGT 295

Query: 285 LSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQ 344
           L N+HSYASGPNTGGPSIGPPPVIANKAP  QPAVNEVYLVW+DEAMSMEERRMS  KYQ
Sbjct: 296 LGNTHSYASGPNTGGPSIGPPPVIANKAPVIQPAVNEVYLVWDDEAMSMEERRMSLPKYQ 355

Query: 345 VHDETSQMSSIDAAIDRRISESRLAGRMAF 374
           VHDETSQMSSIDAAIDRRI E RLAGRMAF
Sbjct: 356 VHDETSQMSSIDAAIDRRILEGRLAGRMAF 385

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521467|ref|XP_003631022.1| Zinc finger protein [Medicago truncatula] gi|355525044|gb|AET05498.1| Zinc finger protein [Medicago truncatula]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/381 (74%), Positives = 315/381 (82%), Gaps = 14/381 (3%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 179
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 238
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 239 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 293
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 294 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMS 353
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQMS
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMS 353

Query: 354 SIDAAIDRRISESRLAGRMAF 374
           SIDAAID+RI ESRLAGRMAF
Sbjct: 354 SIDAAIDKRILESRLAGRMAF 374

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738020|emb|CBI27221.3| unnamed protein product [Vitis vinifera]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/376 (74%), Positives = 317/376 (84%), Gaps = 3/376 (0%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 181 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 238
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 239 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 298
            FS P+ STSI LSS AE+  S++AHSS N+S+ +SY  PS+QGG   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTG 299

Query: 299 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAA 358
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQMSSIDAA
Sbjct: 300 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMSSIDAA 359

Query: 359 IDRRISESRLAGRMAF 374
           IDRRI ESRLAGRMAF
Sbjct: 360 IDRRILESRLAGRMAF 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524640|ref|XP_003530936.1| PREDICTED: uncharacterized protein LOC100819009 isoform 1 [Glycine max]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 287/376 (76%), Positives = 318/376 (84%), Gaps = 7/376 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 240 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 298
           FSA P+PS+  +++S       VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTSVMSANVPVDTHLSSNSSVTSSYQAIGIPGGAASNSHSYASGPNTG 295

Query: 299 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAA 358
           GPSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQMSSIDAA
Sbjct: 296 GPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAA 355

Query: 359 IDRRISESRLAGRMAF 374
           ID+RI ESRLAGRMAF
Sbjct: 356 IDKRILESRLAGRMAF 371

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423609|ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/376 (72%), Positives = 307/376 (81%), Gaps = 16/376 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 181 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 238
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 239 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 298
            FS P+ STSI LSS AE+  S++AHSS N+             G   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNS-------------GPSINSHSYASGPNTG 286

Query: 299 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAA 358
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQMSSIDAA
Sbjct: 287 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMSSIDAA 346

Query: 359 IDRRISESRLAGRMAF 374
           IDRRI ESRLAGRMAF
Sbjct: 347 IDRRILESRLAGRMAF 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513020|ref|XP_003525212.1| PREDICTED: uncharacterized protein LOC100789368 [Glycine max]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 282/376 (75%), Positives = 313/376 (83%), Gaps = 7/376 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YP +  L  M P+Y+ AVPVPP  W VPPRPQPW+ Q   VS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPSRPALPTMPPVYNPAVPVPPNAWVVPPRPQPWFSQPPVVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSSA 235

Query: 240 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 298
           FSA P+PS+  +++        VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTPVMSTNVPVDTHLSSNSSVTSSYQAIGVPGGAASNSHSYASGPNTG 295

Query: 299 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAA 358
           GPSIGPPPVIANKAPA QPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQMSSIDAA
Sbjct: 296 GPSIGPPPVIANKAPAPQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAA 355

Query: 359 IDRRISESRLAGRMAF 374
           ID+RI ESRLAGRMAF
Sbjct: 356 IDKRILESRLAGRMAF 371

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138544|ref|XP_002326629.1| predicted protein [Populus trichocarpa] gi|222833951|gb|EEE72428.1| predicted protein [Populus trichocarpa]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/375 (75%), Positives = 310/375 (82%), Gaps = 13/375 (3%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLA+HYG++E+E PSK AK D    Q +GG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLASHYGDDEDETPSKAAKGDIPSAQRIGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGY 179
           +PG L   YPPQ  LG MQPI  + +P   P    +PPRPQPW+P H AVSI P A + Y
Sbjct: 121 MPGPLSTGYPPQP-LGAMQPIGPTLIPAYTPTKNEIPPRPQPWFPTHPAVSISPSAPIAY 179

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 239
           AQQPLFPVQN+RPP+ S+TS AL PS   PPG+PSSTPP  VSQPLFPVVNNN   QSS 
Sbjct: 180 AQQPLFPVQNMRPPVPSTTSIALPPSQTPPPGLPSSTPP--VSQPLFPVVNNN-LPQSSP 236

Query: 240 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 299
           FSAP+P TSI+ SS  E+KGSV+ HS  N+S+T  Y +P        N+HSYASGPNTGG
Sbjct: 237 FSAPLPPTSISSSSPGEVKGSVNVHSGVNSSMTTGY-LP-------GNTHSYASGPNTGG 288

Query: 300 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAI 359
           PSIGPPPVIANKAPATQ AVNEVYLVW+DEAMSMEERRMS  KYQVHDETSQMSS+DAAI
Sbjct: 289 PSIGPPPVIANKAPATQTAVNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSVDAAI 348

Query: 360 DRRISESRLAGRMAF 374
           D+RI ESRLAGRMAF
Sbjct: 349 DKRILESRLAGRMAF 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524642|ref|XP_003530937.1| PREDICTED: uncharacterized protein LOC100819009 isoform 2 [Glycine max]

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/375 (75%), Positives = 308/375 (82%), Gaps = 17/375 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 240 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 299
           FSAP   +S+          SV +  SAN  V    H+ S    T SNSHSYASGPNTGG
Sbjct: 236 FSAPPLPSSVP---------SVTSVMSANVPVDT--HLSSNSSVTTSNSHSYASGPNTGG 284

Query: 300 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAI 359
           PSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQMSSIDAAI
Sbjct: 285 PSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAI 344

Query: 360 DRRISESRLAGRMAF 374
           D+RI ESRLAGRMAF
Sbjct: 345 DKRILESRLAGRMAF 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433517|ref|XP_004134544.1| PREDICTED: uncharacterized protein LOC101206973 [Cucumis sativus] gi|449506782|ref|XP_004162847.1| PREDICTED: uncharacterized protein LOC101227282 [Cucumis sativus]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/375 (75%), Positives = 311/375 (82%), Gaps = 4/375 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRE+TDIEIYGMQGIPPDVLAAHYGEEEEE  SK+AKV+    Q+VGGV
Sbjct: 61  ESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEEEEESLSKVAKVEMPSTQMVGGV 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           VPG LG+ YPPQ  L  MQPIY S     P  WPVPPRPQPW+P ++AVSIPPP  +GYA
Sbjct: 121 VPGSLGIMYPPQPGLASMQPIYPSTGQAQPTAWPVPPRPQPWFPPNSAVSIPPPVQLGYA 180

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTT-SQSSL 239
           QQPLFPVQ  RPPL  S++P LQP  + PPG+ S+TP  +VSQPLFPVV+N+   +QSS 
Sbjct: 181 QQPLFPVQTARPPLPVSSTPMLQPLQITPPGLTSTTPTASVSQPLFPVVSNSHGPTQSSP 240

Query: 240 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 299
           FS+   S SI L+S+A+IKGSV  H   N S   +  V ++ GG LSNSHSYASGPNTGG
Sbjct: 241 FSSSTLSASIPLTSAADIKGSV-THLGTNFSTIGN-QVANIPGGILSNSHSYASGPNTGG 298

Query: 300 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAI 359
           PSIGPPPVIANKAP TQP+ NEVYLVW+DEAMSMEERRMS  KYQVHDETSQMSSIDAAI
Sbjct: 299 PSIGPPPVIANKAP-TQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQMSSIDAAI 357

Query: 360 DRRISESRLAGRMAF 374
           D+RI ESRLAGRM F
Sbjct: 358 DKRILESRLAGRMPF 372

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521469|ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi|355525045|gb|AET05499.1| Zinc finger protein [Medicago truncatula]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/360 (73%), Positives = 295/360 (81%), Gaps = 14/360 (3%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 179
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 238
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 239 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 293
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 294 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMS 353
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQVS 353

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
TAIR|locus:2015776	367	SUF4 "suppressor of FRIGIDA4"	0.377	0.384	0.715	5.8e-105
UNIPROTKB|E2RI65	457	ZNF207 "Uncharacterized protei	0.229	0.188	0.678	1.4e-41
UNIPROTKB|F1RKW7	464	ZNF207 "Uncharacterized protei	0.229	0.185	0.678	7.5e-41
UNIPROTKB|F1MVH9	420	ZNF207 "Uncharacterized protei	0.229	0.204	0.678	7.5e-41
WB|WBGene00007105	341	B0035.1 [Caenorhabditis elegan	0.283	0.310	0.581	5.1e-40
UNIPROTKB|J3QRS9	493	ZNF207 "Zinc finger protein 20	0.374	0.283	0.468	2.8e-38
UNIPROTKB|F1PRK3	494	ZNF207 "Uncharacterized protei	0.374	0.283	0.468	2.8e-38
UNIPROTKB|O43670	478	ZNF207 "Zinc finger protein 20	0.374	0.292	0.468	2.8e-38
ZFIN|ZDB-GENE-030131-7377	436	znf207b "zinc finger protein 2	0.229	0.197	0.666	9.3e-38
UNIPROTKB|E1C275	465	E1C275 "Uncharacterized protei	0.229	0.184	0.678	2.4e-37

TAIR|locus:2015776 SUF4 "suppressor of FRIGIDA4" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
 Identities = 103/144 (71%), Positives = 112/144 (77%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MGKKKKR + KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA GM IHVLQVHK
Sbjct:     1 MGKKKKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHK 60

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFXXXXXXX 120
             ENVTKVPNAK GR+STDIEIYGMQGIPP VL AHYGEEE+E P+K+AKV+          
Sbjct:    61 ENVTKVPNAKDGRDSTDIEIYGMQGIPPHVLTAHYGEEEDEPPAKVAKVEIP-SAPLGGV 119

Query:   121 XXXXXXXSYPPQSTLGMM--QPIY 142
                     YPPQ   G +  +P+Y
Sbjct:   120 VPRPYGMVYPPQQVPGAVPARPMY 143

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0009910 "negative regulation of flower development" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

UNIPROTKB|E2RI65 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1RKW7 ZNF207 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MVH9 ZNF207 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

WB|WBGene00007105 B0035.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 360 (131.8 bits), Expect = 5.1e-40, Sum P(3) = 5.1e-40
 Identities = 64/110 (58%), Positives = 84/110 (76%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+V  K WC+YC+REFDDEKIL+QHQKAKHFKCH+CHKKL +  G++IH +QVHK
Sbjct:     1 MGRKKKKVD-KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD 110
             E + K+P A  GR++  +EIYGMQGIP     A+ G  +EE   K +++D
Sbjct:    60 ETIDKIPAAVHGRDNIHVEIYGMQGIPS---GAYRGAADEEPDEKRSRMD 106

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J3QRS9 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 349 (127.9 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
 Identities = 67/143 (46%), Positives = 87/143 (60%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPI 141
                        P Q   G + P+
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPM 142

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PRK3 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 349 (127.9 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
 Identities = 67/143 (46%), Positives = 87/143 (60%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPI 141
                        P Q   G + P+
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPM 142

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|O43670 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 349 (127.9 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
 Identities = 67/143 (46%), Positives = 87/143 (60%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPI 141
                        P Q   G + P+
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPM 142

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

ZFIN|ZDB-GENE-030131-7377 znf207b "zinc finger protein 207, b" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 58/87 (66%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             + +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 DTIDGVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E1C275 E1C275 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 347 (127.2 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_III0155 hypothetical protein (385 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	374
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	6e-04
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	0.001
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	0.001
PRK03427	333	PRK03427, PRK03427, cell division protein ZipA; Pr	0.002
pfam00412	58	pfam00412, LIM, LIM domain	0.002
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.003
cd08368	53	cd08368, LIM, LIM is a small protein-protein inter	0.004
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.004

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.3 bits (97), Expect = 6e-04
 Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 145 AVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQP 204
            VP P    P    P P  P   A S  P AA      P  PV+    P      P   P
Sbjct: 362 PVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPP 420

Query: 205 SPVVPPGMPSSTP 217
            P  P   P  T 
Sbjct: 421 VPHTPESAPKLTR 433

Length = 585

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 21/86 (24%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 139 QPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASST 198
               +SA   PPA  P  P   P     A  + P  A    A  P  P Q     +A   
Sbjct: 407 PAAAASAPAAPPAAAPPAPVAAP--AAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPV 464

Query: 199 SPALQPSPVVPPGMPSSTPPVTVSQP 224
             A +P+       P++ P      P
Sbjct: 465 RVAPEPAVASAAPAPAAAPAAARLTP 490

Length = 618

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 36/232 (15%), Positives = 50/232 (21%), Gaps = 22/232 (9%)

Query: 137 MMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLAS 196
           + Q   S     P    P  P P    PQ      P  A            Q+  P  + 
Sbjct: 39  LSQ---SGVAEFPWDPSPQAPPPVAQLPQPLPQPPPTQALQALPAGD--QQQHNTPTGSP 93

Query: 197 STSPALQPS-PVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSA 255
           + +P    + P  P G    T P  +     PV+     + S L           L    
Sbjct: 94  AANPPATFALPAGPAGPTIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRY 153

Query: 256 EIKGSVDAHSSANTSVTN-SYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPA 314
               S    S   ++  N    +     G             T G        +     A
Sbjct: 154 GAPASGQLPSQQQSAQKNDESQLQQQPNGETPP-------QQTDGAGDDESEALVRLREA 206

Query: 315 TQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQMSSIDAAIDRRISES 366
                       E      E      V  Q   +         A    I   
Sbjct: 207 DGTL--------EQRIKGAEGGGAMKVLKQPKKQAKSSKRRTIAQIDGIDSD 250

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 24/96 (25%), Positives = 31/96 (32%), Gaps = 1/96 (1%)

Query: 130 PPQSTLGMMQPIYSSAVPVPPAGWPV-PPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 188
              S     QP Y+SA P  P   P     P    P+ A  +  P     Y  QP  P+Q
Sbjct: 84  ARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRPAQPAPQPVQQPAYQPQPEQPLQ 143

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQP 224
               P  +     +  +P           PV   QP
Sbjct: 144 QPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQP 179

Length = 333

>gnl|CDD|215907 pfam00412, LIM, LIM domain

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 8/40 (20%)

Query: 14 CYYCDREFDDEKILVQ------HQKAKHFKCHVCHKKLST 47
          C  C +   D +++ +      H   + F+C VC K L  
Sbjct: 1  CAGCGKPIYDRELVRRALGKVWH--PECFRCAVCGKPLGP 38

This family represents two copies of the LIM structural domain. Length = 58

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 130 PPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ- 188
             +     ++P+++     P         P P     ++ +  P A     Q    P   
Sbjct: 371 GGRGPKQHIKPVFTQPAAAPQPSAAAAASPSP---SQSSAAAQPSAPQSATQPAGTPPTV 427

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQ 223
           +V PP A   +P       V P        + VS+
Sbjct: 428 SVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSK 462

Length = 614

>gnl|CDD|188711 cd08368, LIM, LIM is a small protein-protein interaction domain, containing two zinc fingers

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 14 CYYCDREFDDEKILVQHQKA---KHFKCHVCHKKLST 47
          C  C +  +  ++L    K    + FKC VC K L  
Sbjct: 1  CAGCGKPIEGRELLRALGKKWHPECFKCSVCGKPLGG 37

LIM domains are identified in a diverse group of proteins with wide variety of biological functions, including gene expression regulation, cell fate determination, cytoskeleton organization, tumor formation and development. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes. They perform their functions through interactions with other protein partners. LIM domains are 50-60 amino acids in size and share two characteristic highly conserved zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The consensus sequence of LIM domain has been defined as C-x(2)-C-x(16,23)-H-x(2)-[CH]-x(2)-C-x(2)-C-x(16, 21)-C-x(2,3)-[CHD] (where X denotes any amino acid). Length = 53

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 37/168 (22%), Positives = 45/168 (26%), Gaps = 22/168 (13%)

Query: 130 PPQSTLGMMQP----IYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLF 185
           P Q     M P          P  P G+P PP+  P   Q       P  A     QP  
Sbjct: 176 PQQVLPQGMPPRQAAFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQA---PAQPPL 232

Query: 186 PVQ--NVRPPLASSTSPALQ----PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 239
           P Q     PPL     P L     P P  PP      PP   +QP  P  N  T      
Sbjct: 233 PPQLPQQPPPLQQPQFPGLSQQMPPPPPQPPQQ-QQQPPQPQAQP--PPQNQPTPHPGLP 289

Query: 240 FSA------PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 281
                    P     + L    + +            ++        Q
Sbjct: 290 QGQNAPLPPPQQPQLLPLVQQPQGQQRGPQFREQLVQLSQQQREALSQ 337

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	374
KOG2893	341	consensus Zn finger protein [General function pred	99.94
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.65
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.55
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.35
KOG3576	267	consensus Ovo and related transcription factors [T	99.29
KOG3576	267	consensus Ovo and related transcription factors [T	99.13
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.03
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.83
PHA00733	128	hypothetical protein	98.8
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.75
KOG3608	467	consensus Zn finger proteins [General function pre	98.57
KOG3608	467	consensus Zn finger proteins [General function pre	98.53
PHA02768	55	hypothetical protein; Provisional	98.52
PHA00733	128	hypothetical protein	98.5
PHA02768	55	hypothetical protein; Provisional	98.46
PLN03086	567	PRLI-interacting factor K; Provisional	98.46
KOG3993	500	consensus Transcription factor (contains Zn finger	98.4
PHA00732	79	hypothetical protein	98.09
PHA00732	79	hypothetical protein	97.88
PHA00616	44	hypothetical protein	97.87
KOG3993	500	consensus Transcription factor (contains Zn finger	97.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.52
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.5
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.48
KOG2893	341	consensus Zn finger protein [General function pred	97.47
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.45
PLN03086	567	PRLI-interacting factor K; Provisional	97.36
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.21
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.18
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.78
PHA00616	44	hypothetical protein	96.77
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.28
smart00355	26	ZnF_C2H2 zinc finger.	96.14
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.48
smart00355	26	ZnF_C2H2 zinc finger.	95.23
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.14
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.99
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.84
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.69
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.45
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.17
PRK04860	160	hypothetical protein; Provisional	94.03
COG5048	467	FOG: Zn-finger [General function prediction only]	93.72
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.57
KOG1146	1406	consensus Homeobox protein [General function predi	93.5
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.65
KOG1146	1406	consensus Homeobox protein [General function predi	92.28
COG5236	493	Uncharacterized conserved protein, contains RING Z	91.17
COG5048	467	FOG: Zn-finger [General function prediction only]	90.5
KOG3671	569	consensus Actin regulatory protein (Wiskott-Aldric	90.19
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	89.66
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	89.5
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	89.46
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	88.6
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.53
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	87.17
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.12
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.46
COG5188	470	PRP9 Splicing factor 3a, subunit 3 [RNA processing	85.95
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	85.61
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.16
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	81.56
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	80.35
KOG2186	276	consensus Cell growth-regulating nucleolar protein	80.23

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=99.94  E-value=1e-25  Score=208.77  Aligned_cols=149  Identities=46%  Similarity=0.837  Sum_probs=110.5

Q ss_pred             CCCCCCCCCCccccCcCCCcccChHHHHHHhhcCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccc
Q 017258            1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (374)
Q Consensus         1 mgkKk~~~gEKp~C~~CgK~Fs~~s~Lk~H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i   80 (374)
                      |||||++ ..|+||-+|++.|.+...|.+|++.|.|||++|.|++.+--.|..|..++|.|..-+++++..+|+....+|
T Consensus         1 mgrkkkk-~~kpwcwycnrefddekiliqhqkakhfkchichkkl~sgpglsihcmqvhketid~ip~av~gr~~i~vei   79 (341)
T KOG2893|consen    1 MGRKKKK-VDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVEI   79 (341)
T ss_pred             CCccccc-cCCceeeecccccchhhhhhhhhhhccceeeeehhhhccCCCceeehhhhhhhhhhcccccccCCcceeEEE
Confidence            8999999 789999999999999999999999999999999999999999999999999998888899999999999999


Q ss_pred             cCCCCCCHHHHHHHHhhhcCCCcccccccccCCCCccCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC
Q 017258           81 YGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQS--TLGMMQPIYSSAVPVPPAGWPV  155 (374)
Q Consensus        81 CgK~F~~~s~L~~H~rth~ge~~~k~~k~~~~~~~~~~~~~p~~~g~~~pP~p--~~~~~~P~~~p~~p~pp~~~~~  155 (374)
                      +|+..+....++.-.   +.+.+.|+.+++..+.-.  ..++.....++++.+  ..+..+|++...+++.+++..+
T Consensus        80 ygmqgip~~~~r~~~---de~~~ekr~~~d~~~~~~--~~~p~~~~~~f~~~p~~p~g~~pp~~~~gmpp~p~~~~~  151 (341)
T KOG2893|consen   80 YGMQGIPSGAYRGAA---DEEPDEKRSRMDNGPPMP--TPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMP  151 (341)
T ss_pred             eeccCCCchhhhhhh---hcCchhhhhcccCCCCCC--CCCCCcccCCCCCCCCCCCCCCCcccccCCCCCCCCCCC
Confidence            999999987655443   233334555555444321  122222222222222  1244466777777766666433

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.65  E-value=8.8e-17  Score=152.62  Aligned_cols=86  Identities=19%  Similarity=0.275  Sum_probs=77.1

Q ss_pred             ccc-cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCC
Q 017258           11 KVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (374)
Q Consensus        11 Kp~-C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~   87 (374)
                      |-+ |.+|||+|...-.|+.|+|  .-+++|.+|||+|.|...|+.|+|+|+|||+            |.|..|+|.|.+
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP------------F~C~hC~kAFAD  227 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKP------------FSCPHCGKAFAD  227 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCC------------ccCCcccchhcc
Confidence            445 9999999999999999999  5599999999999999999999999999998            888899999999


Q ss_pred             HHHHHHHHhhhcCCCcccccc
Q 017258           88 PDVLAAHYGEEEEEVPSKMAK  108 (374)
Q Consensus        88 ~s~L~~H~rth~ge~~~k~~k  108 (374)
                      +++|+.|+++|.+.+.++..+
T Consensus       228 RSNLRAHmQTHS~~K~~qC~~  248 (279)
T KOG2462|consen  228 RSNLRAHMQTHSDVKKHQCPR  248 (279)
T ss_pred             hHHHHHHHHhhcCCccccCcc
Confidence            999999999999887766543

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.55  E-value=1.4e-15  Score=144.39  Aligned_cols=74  Identities=19%  Similarity=0.302  Sum_probs=69.6

Q ss_pred             cccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCC
Q 017258           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~   87 (374)
                      ..|.+|||+|++..-|+-|+|    ||||.|.+|+|+|.++++|+-|+++|.+.|.            |+|..|+|.|..
T Consensus       188 c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~------------~qC~~C~KsFsl  255 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK------------HQCPRCGKSFAL  255 (279)
T ss_pred             cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc------------ccCcchhhHHHH
Confidence            339999999999999999999    9999999999999999999999999988876            999999999999


Q ss_pred             HHHHHHHHhh
Q 017258           88 PDVLAAHYGE   97 (374)
Q Consensus        88 ~s~L~~H~rt   97 (374)
                      .+.|.+|...
T Consensus       256 ~SyLnKH~ES  265 (279)
T KOG2462|consen  256 KSYLNKHSES  265 (279)
T ss_pred             HHHHHHhhhh
Confidence            9999999754

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.35  E-value=1.7e-13  Score=143.14  Aligned_cols=79  Identities=15%  Similarity=0.336  Sum_probs=72.6

Q ss_pred             CCCCCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccc
Q 017258            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (374)
Q Consensus         6 ~~~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i   80 (374)
                      ++..+-.| |+.|+|+|...+.|.||.-    .|||+|.+|.|+|+.+.+|..|.|.|.|||+            |.|+.
T Consensus       888 ~kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP------------fQCdK  955 (1007)
T KOG3623|consen  888 AKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP------------FQCDK  955 (1007)
T ss_pred             ccCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc------------chhhh
Confidence            33344566 9999999999999999987    8999999999999999999999999999998            99999


Q ss_pred             cCCCCCCHHHHHHHHh
Q 017258           81 YGMQGIPPDVLAAHYG   96 (374)
Q Consensus        81 CgK~F~~~s~L~~H~r   96 (374)
                      |+|+|.+...+.+||.
T Consensus       956 ClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  956 CLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             hhhhcccccchHhhhc
Confidence            9999999999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.29  E-value=6.1e-13  Score=121.68  Aligned_cols=81  Identities=16%  Similarity=0.234  Sum_probs=70.3

Q ss_pred             CCccccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCC
Q 017258            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (374)
Q Consensus         9 gEKp~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~   84 (374)
                      +.++.|.+|+|.|..-..|.+|++    .|.|.|..|||.|...-+|+||.|+|+|.++            |+|+.|+|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrp------------ykc~~c~ka  182 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP------------YKCSLCEKA  182 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccc------------cchhhhhHH
Confidence            344559999999999999999999    7889999999999999999999999999887            888888888


Q ss_pred             CCCHHHHHHHHhhhcCC
Q 017258           85 GIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        85 F~~~s~L~~H~rth~ge  101 (374)
                      |.++..|+.|.+.-++.
T Consensus       183 ftqrcsleshl~kvhgv  199 (267)
T KOG3576|consen  183 FTQRCSLESHLKKVHGV  199 (267)
T ss_pred             HHhhccHHHHHHHHcCc
Confidence            88888888888765553

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.13  E-value=1.5e-11  Score=112.61  Aligned_cols=87  Identities=23%  Similarity=0.391  Sum_probs=74.0

Q ss_pred             cccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCcc---ccCCCCCCCCCcccccccCCC
Q 017258           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV---TKVPNAKPGRESTDIEIYGMQ   84 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp---~~cp~~kpgr~~~~C~iCgK~   84 (374)
                      +.|.+|||.|.+-.+|++|+|    .|||+|..|+|.|.++-.|..|.+.+|+...   |+....    +-|.|+.||..
T Consensus       146 ~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~----kl~vcedcg~t  221 (267)
T KOG3576|consen  146 HLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRA----KLYVCEDCGYT  221 (267)
T ss_pred             HHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhh----heeeecccCCC
Confidence            349999999999999999999    8999999999999999999999999998642   222212    33999999999


Q ss_pred             CCCHHHHHHHHhhhcCCC
Q 017258           85 GIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        85 F~~~s~L~~H~rth~ge~  102 (374)
                      -...+.+..|++.|+-..
T Consensus       222 ~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  222 SERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             CCChhHHHHHHHhcCCCC
Confidence            999999999999876554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.03  E-value=6.3e-11  Score=124.31  Aligned_cols=72  Identities=18%  Similarity=0.275  Sum_probs=60.9

Q ss_pred             ccCcCCCcccChHHHHHHhh-----------------cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCc
Q 017258           13 WCYYCDREFDDEKILVQHQK-----------------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRES   75 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R-----------------eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~   75 (374)
                      -|-.|..+|..+..|.+|+.                 -|.|||..|||+|+.+.+|+.|+|+|.|||+            
T Consensus       242 sC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKP------------  309 (1007)
T KOG3623|consen  242 SCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKP------------  309 (1007)
T ss_pred             cchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCC------------
Confidence            38888888888888888876                 5788898899999988889999888888887            


Q ss_pred             ccccccCCCCCCHHHHHHHHh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYG   96 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~r   96 (374)
                      |+|..|+|+|.+...+..|+-
T Consensus       310 feCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  310 FECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cCCcccccccccCCccccccc
Confidence            778888888888888888864

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.83  E-value=9.4e-10  Score=117.28  Aligned_cols=83  Identities=24%  Similarity=0.386  Sum_probs=72.2

Q ss_pred             cc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc---ccCC
Q 017258           12 VW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE---IYGM   83 (374)
Q Consensus        12 p~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~---iCgK   83 (374)
                      +. |-+|.|+.+..+.|+.|+|    ||||||.+||++|.++++|+.|+ .+|.-++       +.|-.|.|.   +|.+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p-------~~R~q~ScP~~~ic~~  676 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKP-------PARVQFSCPSTFICQK  676 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCc-------cccccccCCchhhhcc
Confidence            44 9999999999999999999    99999999999999999999999 4554442       334448898   9999


Q ss_pred             CCCCHHHHHHHHhhhcCCC
Q 017258           84 QGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        84 ~F~~~s~L~~H~rth~ge~  102 (374)
                      .|...-.|.+|.|+|.+..
T Consensus       677 kftn~V~lpQhIriH~~~~  695 (958)
T KOG1074|consen  677 KFTNAVTLPQHIRIHLGGQ  695 (958)
T ss_pred             cccccccccceEEeecCCC
Confidence            9999999999999998654

>PHA00733 hypothetical protein

Probab=98.80  E-value=3.8e-09  Score=91.53  Aligned_cols=75  Identities=12%  Similarity=0.167  Sum_probs=63.3

Q ss_pred             cccCcCCCcccChHHHHHH------hh---cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccC
Q 017258           12 VWCYYCDREFDDEKILVQH------QK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H------~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCg   82 (374)
                      ..|.+|.+.|.....|..|      +.   +++|+|..|++.|.+...|.+|++.+  +..            |.|.+|+
T Consensus        41 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~------------~~C~~Cg  106 (128)
T PHA00733         41 LIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHS------------KVCPVCG  106 (128)
T ss_pred             HHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcC------------ccCCCCC
Confidence            3499999999887777665      22   78999999999999999999999764  222            8999999


Q ss_pred             CCCCCHHHHHHHHhhhcC
Q 017258           83 MQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        83 K~F~~~s~L~~H~rth~g  100 (374)
                      +.|.....|.+|++..++
T Consensus       107 K~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        107 KEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCHHHHHHHHHHhcC
Confidence            999999999999987665

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.75  E-value=2.7e-09  Score=113.81  Aligned_cols=77  Identities=23%  Similarity=0.434  Sum_probs=61.4

Q ss_pred             CCccccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCC
Q 017258            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (374)
Q Consensus         9 gEKp~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~   84 (374)
                      ..|..|.+|.|.|...+.|++|.|    ||||+|.+||.+|+++++|+.|...|+...++.--+.+++..-+.|++|--.
T Consensus       351 ~~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~~i~st~  430 (958)
T KOG1074|consen  351 FFKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQYVITSTG  430 (958)
T ss_pred             cccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcceeeccc
Confidence            345569999999999999999999    9999999999999999999999977766554433344555555677777544


Q ss_pred             C
Q 017258           85 G   85 (374)
Q Consensus        85 F   85 (374)
                      |
T Consensus       431 ~  431 (958)
T KOG1074|consen  431 L  431 (958)
T ss_pred             c
Confidence            4

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.57  E-value=6.7e-08  Score=95.07  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=70.7

Q ss_pred             cCcCCCcccChHHHHHHhh-----cCccccccCccccCCchhhHHHHhhhccCccccCCC--C-----------------
Q 017258           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--A-----------------   69 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R-----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~--~-----------------   69 (374)
                      |..|+......+.|.+|+|     .|+|||+.|+++|.+.+.|.+|.. .|.+..|.|..  |                 
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRRHFLEV  344 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hccccceecCCCCCcHHHHHHHHHHHHHHHh
Confidence            7788888888888888888     899999999999999999999995 66677788864  3                 


Q ss_pred             CC--CCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           70 KP--GRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        70 kp--gr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      ++  ..-.|.|+.|.+.|..-..|.+|++..++-
T Consensus       345 hEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  345 HEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             ccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            11  234599999999999999999998765543

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.53  E-value=4e-08  Score=96.63  Aligned_cols=89  Identities=21%  Similarity=0.361  Sum_probs=66.6

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh------cCccccccCccccCCchhhHHHHhhhccCccccCCCC------------
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA------------   69 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R------eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~------------   69 (374)
                      +||.. |.+||+-|.++..|-.|.|      ..+|.|..|-|+|.+...|+.|++.|-.  -|+|+.|            
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~  281 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTT  281 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHH
Confidence            67777 8888888888888888877      4578888888888888888888755543  3466653            


Q ss_pred             -----CCCCCcccccccCCCCCCHHHHHHHHhhhc
Q 017258           70 -----KPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        70 -----kpgr~~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                           +...++|+|+.|.+.|...++|.+|...|.
T Consensus       282 H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  282 HIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence                 222456899999999999999999988775

>PHA02768 hypothetical protein; Provisional

Probab=98.52  E-value=3.1e-08  Score=73.33  Aligned_cols=42  Identities=10%  Similarity=0.226  Sum_probs=25.2

Q ss_pred             cccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHH
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVL   91 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L   91 (374)
                      |+|..|||.|.+.++|.+|+|+|+  ++            |+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~------------~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TN------------LKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--Cc------------ccCCcccceeccccee
Confidence            566666666666666666666655  22            5566666666555443

>PHA00733 hypothetical protein

Probab=98.50  E-value=1e-07  Score=82.62  Aligned_cols=52  Identities=25%  Similarity=0.441  Sum_probs=48.5

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      ++++| |..|++.|.+...|++|++  +++|+|.+|++.|...+.|.+|++..|+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            46677 9999999999999999999  7899999999999999999999998886

>PHA02768 hypothetical protein; Provisional

Probab=98.46  E-value=7.7e-08  Score=71.21  Aligned_cols=41  Identities=17%  Similarity=0.361  Sum_probs=37.7

Q ss_pred             cccCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhH
Q 017258           12 VWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMA   52 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~   52 (374)
                      +.|.+|||.|.+..+|.+|+|  .|+|+|..|+|.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            349999999999999999999  77999999999999888775

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.46  E-value=2.5e-07  Score=97.34  Aligned_cols=57  Identities=18%  Similarity=0.318  Sum_probs=46.4

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHhhhccCccccCCC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~   68 (374)
                      .++++ |.+|++.|. ...|+.|++  .++++|. |++.| .+..|..|+++|-.++++.|..
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f  509 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF  509 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC
Confidence            45666 999999996 678999998  8899999 99766 5689999998887788755543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.40  E-value=8.1e-08  Score=96.29  Aligned_cols=92  Identities=21%  Similarity=0.326  Sum_probs=70.7

Q ss_pred             ccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccC----CCC--------------C
Q 017258           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV----PNA--------------K   70 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c----p~~--------------k   70 (374)
                      .|+.|...|.+-..|.+|..    .-.|+|..|+|.|.-..+|..|.|= |.-++..-    +-.              +
T Consensus       269 iCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  269 ICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            39999999999999999987    5579999999999999999999854 43332111    100              0


Q ss_pred             ----CCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           71 ----PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        71 ----pgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                          .....|.|++|+|.|.....|++|+.+|......+
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                11124999999999999999999998887654433

>PHA00732 hypothetical protein

Probab=98.09  E-value=1.7e-06  Score=68.97  Aligned_cols=40  Identities=28%  Similarity=0.428  Sum_probs=27.6

Q ss_pred             cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHh
Q 017258           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVL   56 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r   56 (374)
                      |..|++.|.+...|++|++  ..++.|..|+++|.   .|.+|.+
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhc
Confidence            7777777777777777765  45677777777776   3666663

>PHA00732 hypothetical protein

Probab=97.88  E-value=8.7e-06  Score=64.90  Aligned_cols=50  Identities=20%  Similarity=0.244  Sum_probs=42.4

Q ss_pred             ccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|+|..|++.|.+...|.+|++.+|..              +.|+.||+.|..   |..|.+++.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--------------~~C~~CgKsF~~---l~~H~~~~~~~   50 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--------------TKCPVCNKSYRR---LNQHFYSQYDI   50 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--------------CccCCCCCEeCC---hhhhhcccCCc
Confidence            589999999999999999999855542              579999999994   88999887664

>PHA00616 hypothetical protein

Probab=97.87  E-value=4.9e-06  Score=58.91  Aligned_cols=32  Identities=25%  Similarity=0.485  Sum_probs=28.8

Q ss_pred             ccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|..||+.|..++.|.+|++.||+++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999987444

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.57  E-value=2.2e-05  Score=79.13  Aligned_cols=51  Identities=29%  Similarity=0.570  Sum_probs=44.5

Q ss_pred             ccccCcCCCcccChHHHHHHhh---------------cC----------------------ccccccCccccCCchhhHH
Q 017258           11 KVWCYYCDREFDDEKILVQHQK---------------AK----------------------HFKCHVCHKKLSTAGGMAI   53 (374)
Q Consensus        11 Kp~C~~CgK~Fs~~s~Lk~H~R---------------eK----------------------PfkC~~CgK~Fs~~s~L~r   53 (374)
                      -|.|.+|+|.|+--.+|..|.|               +|                      -|.|.+|+|+|.+...|++
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            3559999999999999999988               11                      2789999999999999999


Q ss_pred             HHhhhccC
Q 017258           54 HVLQVHKE   61 (374)
Q Consensus        54 H~r~hH~e   61 (374)
                      |+.+||..
T Consensus       375 Hqlthq~~  382 (500)
T KOG3993|consen  375 HQLTHQRA  382 (500)
T ss_pred             hHHhhhcc
Confidence            99888854

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.52  E-value=4e-05  Score=48.23  Aligned_cols=25  Identities=12%  Similarity=-0.011  Sum_probs=16.7

Q ss_pred             hhHHHHhhhccCccccCCCCCCCCCcccccccCCCCC
Q 017258           50 GMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (374)
Q Consensus        50 ~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~   86 (374)
                      +|.+|+++|.++++            |+|.+|++.|.
T Consensus         1 ~l~~H~~~H~~~k~------------~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP------------YKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSS------------EEESSSSEEES
T ss_pred             CHHHHhhhcCCCCC------------CCCCCCcCeeC
Confidence            36677777766665            66677776664

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.50  E-value=5e-05  Score=61.02  Aligned_cols=71  Identities=24%  Similarity=0.296  Sum_probs=21.1

Q ss_pred             cCcCCCcccChHHHHHHhhcC-ccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHH
Q 017258           14 CYYCDREFDDEKILVQHQKAK-HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~ReK-PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~   92 (374)
                      |.+|+..|.....|..|+++. .+... ..+.+.....|..+.+....+             .+.|.+|++.|.....|.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~~~l~~~~~~~~~~~~~~~~-------------~~~C~~C~~~f~s~~~l~   67 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP-DQKYLVDPNRLLNYLRKKVKE-------------SFRCPYCNKTFRSREALQ   67 (100)
T ss_dssp             ------------------------------------------------S-------------SEEBSSSS-EESSHHHHH
T ss_pred             ccccccccccccccccccccccccccc-cccccccccccccccccccCC-------------CCCCCccCCCCcCHHHHH
Confidence            666777777777777776621 12211 222223333344443222211             289999999999999999


Q ss_pred             HHHhhh
Q 017258           93 AHYGEE   98 (374)
Q Consensus        93 ~H~rth   98 (374)
                      .|++.+
T Consensus        68 ~Hm~~~   73 (100)
T PF12756_consen   68 EHMRSK   73 (100)
T ss_dssp             HHHHHT
T ss_pred             HHHcCc
Confidence            999975

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.49  E-value=2.9e-05  Score=75.88  Aligned_cols=65  Identities=23%  Similarity=0.401  Sum_probs=47.8

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccC-ccccCCC-----C-CCCCCcccccccCCCCCCHHHHHHHHhh
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE-NVTKVPN-----A-KPGRESTDIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~e-kp~~cp~-----~-kpgr~~~~C~iCgK~F~~~s~L~~H~rt   97 (374)
                      +|+|+|.+  |+|+++..-.|+-|++.=|.. +.+.-+.     . ....|+|.|++|+|+|..-..|+-|++.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            79999998  999999999999998543411 2111111     0 1234559999999999999999988764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.48  E-value=5.1e-05  Score=47.73  Aligned_cols=22  Identities=36%  Similarity=0.700  Sum_probs=18.5

Q ss_pred             HHHHHhh----cCccccccCccccCC
Q 017258           26 ILVQHQK----AKHFKCHVCHKKLST   47 (374)
Q Consensus        26 ~Lk~H~R----eKPfkC~~CgK~Fs~   47 (374)
                      +|++|++    ||+|+|.+|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            4667777    999999999999974

...

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=97.47  E-value=0.0011  Score=62.92  Aligned_cols=53  Identities=34%  Similarity=0.455  Sum_probs=39.8

Q ss_pred             CCCCCCCCCCCCCCccccCCCCCCCCCceEEEEecccccChHHHhhccCceee
Q 017258          293 SGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQV  345 (374)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (374)
                      +...|+.++.+.+.++....+++--++.-.-|+-|||.+|.||||+.|+|||-
T Consensus       284 sttsttnsta~kpaasitskpatltttsatklihpdedisleerraqlpkyqr  336 (341)
T KOG2893|consen  284 STTSTTNSTAGKPAASITSKPATLTTTSATKLIHPDEDISLEERRAQLPKYQR  336 (341)
T ss_pred             ccccCcccccccchhhhhcccceeccccceeeeCCcccccHHHHhhhhhhhhh
Confidence            34444445556666655555777766777799999999999999999999984

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.45  E-value=0.00015  Score=53.39  Aligned_cols=43  Identities=28%  Similarity=0.666  Sum_probs=20.4

Q ss_pred             cCcCCCcccChHHHHHHhh------cCccccccCccccCCchhhHHHHhhhc
Q 017258           14 CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R------eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |.+|++. .+...|..|..      .+.+.|.+|.+.+.  .+|.+|++.+|
T Consensus         5 CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    5 CPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            5555552 23344555544      23455555555433  25555554444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.36  E-value=0.00017  Score=76.24  Aligned_cols=32  Identities=25%  Similarity=0.579  Sum_probs=25.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp   67 (374)
                      ++++.|.+|++.|. ...|.+|++.||  +++.|+
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp  482 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP  482 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC
Confidence            35778999999996 678999999887  555554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.31  E-value=9.5e-05  Score=44.60  Aligned_cols=22  Identities=27%  Similarity=0.730  Sum_probs=15.5

Q ss_pred             cccccCccccCCchhhHHHHhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~   57 (374)
                      |+|..|++.|.++..|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.24  E-value=0.00014  Score=43.51  Aligned_cols=24  Identities=25%  Similarity=0.661  Sum_probs=16.5

Q ss_pred             cccccCccccCCchhhHHHHhhhc
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |+|.+|++.|.+...|++|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777665

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.21  E-value=0.00043  Score=50.95  Aligned_cols=53  Identities=19%  Similarity=0.302  Sum_probs=41.1

Q ss_pred             ccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      -|.|.+|++ ..+...|..|....|....          +.+.|.+|...+.  .+|.+|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~----------~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES----------KNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC----------CCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 5566889999988886532          2388999998655  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.18  E-value=0.00014  Score=71.17  Aligned_cols=47  Identities=26%  Similarity=0.673  Sum_probs=43.1

Q ss_pred             CCccc-cCc--CCCcccChHHHHHHhh--c---------------------CccccccCccccCCchhhHHHH
Q 017258            9 SSKVW-CYY--CDREFDDEKILVQHQK--A---------------------KHFKCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus         9 gEKp~-C~~--CgK~Fs~~s~Lk~H~R--e---------------------KPfkC~~CgK~Fs~~s~L~rH~   55 (374)
                      ++|+| |.+  |+|.|.....|+-|+.  .                     |||+|++|+|+++....|+-|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            46888 988  9999999999999988  2                     8999999999999999999996

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.85  E-value=0.00045  Score=43.25  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=18.4

Q ss_pred             ccccccCccccCCchhhHHHHhhhc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      +|+|..|++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777776654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.78  E-value=0.00064  Score=40.90  Aligned_cols=23  Identities=17%  Similarity=0.083  Sum_probs=21.3

Q ss_pred             ccccccCCCCCCHHHHHHHHhhh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth   98 (374)
                      |.|.+|++.|.....|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=96.77  E-value=0.00064  Score=48.22  Aligned_cols=30  Identities=7%  Similarity=-0.190  Sum_probs=27.6

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      |+|..||+.|+..++|.+|++.|+++++..
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            889999999999999999999999987653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.28  E-value=0.0025  Score=37.95  Aligned_cols=24  Identities=17%  Similarity=0.079  Sum_probs=20.0

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhc
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      |.|.+|++.|.....|++|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            679999999999999999998864

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.14  E-value=0.0037  Score=37.53  Aligned_cols=23  Identities=17%  Similarity=0.509  Sum_probs=15.8

Q ss_pred             cccccCccccCCchhhHHHHhhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      |+|..|++.|.....|.+|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46777777777777777777533

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.00  E-value=0.0019  Score=47.15  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=22.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      ++|..|.+|+..+.+..+|+||+.++|+.|+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            8899999999999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.48  E-value=0.007  Score=37.74  Aligned_cols=25  Identities=12%  Similarity=0.001  Sum_probs=23.1

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      |+|..|++.|.....|.+|++.|.+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            8899999999999999999988754

>smart00355 ZnF_C2H2 zinc finger

Probab=95.23  E-value=0.017  Score=34.51  Aligned_cols=24  Identities=13%  Similarity=-0.011  Sum_probs=21.6

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhc
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.14  E-value=0.009  Score=37.56  Aligned_cols=21  Identities=43%  Similarity=0.803  Sum_probs=12.5

Q ss_pred             cccCcCCCcccChHHHHHHhh
Q 017258           12 VWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      ++|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            446666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.99  E-value=0.013  Score=35.72  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=17.6

Q ss_pred             cccccCccccCCchhhHHHHhhhcc
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |+|..|+.... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67888888877 7888888888764

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.84  E-value=0.024  Score=61.20  Aligned_cols=68  Identities=21%  Similarity=0.313  Sum_probs=41.7

Q ss_pred             ccCcCCCcccChHHHHHHhhcCccccccCc------cccCCchhhHHHHhhhccCccccCCCCCCCCCccccc--ccC-C
Q 017258           13 WCYYCDREFDDEKILVQHQKAKHFKCHVCH------KKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYG-M   83 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~ReKPfkC~~Cg------K~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~--iCg-K   83 (374)
                      .|.+|...|.....|.+|++...|.|.+|+      .-|..-+.|..|-|..|                |.|+  .|- +
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H----------------flCE~~~C~~~  247 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----------------FLCEEEFCRTK  247 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC----------------ccccccccccc
Confidence            377777777777777777776666666664      23555566777766666                5665  553 4


Q ss_pred             CCCCHHHHHHHHh
Q 017258           84 QGIPPDVLAAHYG   96 (374)
Q Consensus        84 ~F~~~s~L~~H~r   96 (374)
                      .|.....+..|++
T Consensus       248 ~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  248 KFYVAFELEIELK  260 (669)
T ss_pred             eeeehhHHHHHHH
Confidence            5555444555544

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.69  E-value=0.034  Score=60.03  Aligned_cols=21  Identities=29%  Similarity=0.605  Sum_probs=13.0

Q ss_pred             ccChHHHHHHhh--cCccccccC
Q 017258           21 FDDEKILVQHQK--AKHFKCHVC   41 (374)
Q Consensus        21 Fs~~s~Lk~H~R--eKPfkC~~C   41 (374)
                      |.....|++|++  .+-+.|.+|
T Consensus       124 ~~s~~~Lk~H~~~~H~~~~c~lC  146 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQHKLHLCSLC  146 (669)
T ss_pred             hhHHHHHHHHHHHhhhhhccccc
Confidence            346788888886  444555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.45  E-value=0.018  Score=35.17  Aligned_cols=19  Identities=26%  Similarity=0.763  Sum_probs=8.8

Q ss_pred             ccccCccccCCchhhHHHH
Q 017258           37 KCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus        37 kC~~CgK~Fs~~s~L~rH~   55 (374)
                      .|.+|++.|.+...|+.|+
T Consensus         2 ~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHH
Confidence            3444444444444444444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.17  E-value=0.03  Score=34.13  Aligned_cols=21  Identities=33%  Similarity=0.812  Sum_probs=19.4

Q ss_pred             cccCcCCCcccChHHHHHHhh
Q 017258           12 VWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      ++|.+|++.|.....|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            359999999999999999987

>PRK04860 hypothetical protein; Provisional

Probab=94.03  E-value=0.021  Score=51.45  Aligned_cols=39  Identities=18%  Similarity=0.214  Sum_probs=32.1

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCH
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPP   88 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~   88 (374)
                      -+|+|. |++   ....+++|.++|.+++.            |.|..|++.|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~------------YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV------------YRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc------------EECCCCCceeEEe
Confidence            468998 987   77788999999998876            8888898887654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.72  E-value=0.023  Score=55.80  Aligned_cols=53  Identities=25%  Similarity=0.440  Sum_probs=47.1

Q ss_pred             cCcCCCcccChHHHHHHhh------c--Cccccc--cCccccCCchhhHHHHhhhccCccccC
Q 017258           14 CYYCDREFDDEKILVQHQK------A--KHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R------e--KPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      |..|.+.|.+...|.+|.+      +  ++|.|.  .|++.|.+.+.+.+|.++|.+.+.+.|
T Consensus       292 ~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         292 SKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            9999999999999999877      6  999999  799999999999999988887765444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.57  E-value=0.073  Score=53.15  Aligned_cols=73  Identities=21%  Similarity=0.341  Sum_probs=53.9

Q ss_pred             ccCcCCCcccChHHHHHHhhcCccccccCcc-------ccCCchhhHHHHhhhccCccccCCCCCCCCCccccc--cc--
Q 017258           13 WCYYCDREFDDEKILVQHQKAKHFKCHVCHK-------KLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IY--   81 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~ReKPfkC~~CgK-------~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~--iC--   81 (374)
                      .|.+|.+.|-+...|-+|+|+|.-+|.+|++       -|..-..|.+|.+.-|                |.|.  .|  
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----------------y~ct~qtc~~  285 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH----------------YCCTFQTCRV  285 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc----------------eEEEEEEEec
Confidence            3999999999999999999977777888876       3777888888876554                3342  22  


Q ss_pred             C--CCCCCHHHHHHHHhhhcCC
Q 017258           82 G--MQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        82 g--K~F~~~s~L~~H~rth~ge  101 (374)
                      |  ..|...-.|..|+...++.
T Consensus       286 ~k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         286 GKCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             CcEEEeccHHHHHHHHHHHhhc
Confidence            2  2567777888898665554

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=93.50  E-value=0.031  Score=63.80  Aligned_cols=84  Identities=14%  Similarity=0.163  Sum_probs=62.7

Q ss_pred             cCcCCCcccChHHHHHHhh-----cCccccccCccccCCchhhHHHHhhhccCcc-ccCC-------CC-----CCCCCc
Q 017258           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV-TKVP-------NA-----KPGRES   75 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R-----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp-~~cp-------~~-----kpgr~~   75 (374)
                      |.-|+..|.++..+.-|+.     .|-|+|.+|+..|+..+.|..|+|..|-+.. -.|-       ++     .-+.+.
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            5556667777766666666     7889999999999999999999998664421 1111       10     112345


Q ss_pred             ccccccCCCCCCHHHHHHHHhh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rt   97 (374)
                      |.|..|.-.+.....|.+|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            9999999999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.26  E-value=0.037  Score=34.71  Aligned_cols=22  Identities=27%  Similarity=0.625  Sum_probs=15.7

Q ss_pred             cccccCccccCCchhhHHHHhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~   57 (374)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777643

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.65  E-value=0.093  Score=34.42  Aligned_cols=21  Identities=33%  Similarity=0.697  Sum_probs=14.7

Q ss_pred             cccCcCCCcccChHHHHHHhh
Q 017258           12 VWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      ++|.+|++.|.+...+..|++
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             eEccccCCccCCHHHHHHHHC
Confidence            457777777777777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=92.28  E-value=0.054  Score=61.94  Aligned_cols=87  Identities=10%  Similarity=0.107  Sum_probs=65.2

Q ss_pred             ccCcCCCcccChHHHHHHhh-cCccccccCccccCCchhhHHHHhhhcc-Cccc--cC--CCCCCCCCcccccccCCCCC
Q 017258           13 WCYYCDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVT--KV--PNAKPGRESTDIEIYGMQGI   86 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R-eKPfkC~~CgK~Fs~~s~L~rH~r~hH~-ekp~--~c--p~~kpgr~~~~C~iCgK~F~   86 (374)
                      .|..|++.|.-...+. |+. +++|+|.+|...|.....|..|.+..-. .+..  .-  +.-.+..+.| |.+|...|.
T Consensus      1262 ~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~ 1339 (1406)
T KOG1146|consen 1262 ECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLS 1339 (1406)
T ss_pred             hhhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhcc
Confidence            3999999999988888 877 9999999999999999999999843321 0100  00  0012333446 999999999


Q ss_pred             CHHHHHHHHhhhcCC
Q 017258           87 PPDVLAAHYGEEEEE  101 (374)
Q Consensus        87 ~~s~L~~H~rth~ge  101 (374)
                      ....|.+|+|+-.++
T Consensus      1340 ~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1340 GREALQIHMRSSAHR 1354 (1406)
T ss_pred             hhHHHHHHHHHhhhc
Confidence            999999999985443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=91.17  E-value=0.13  Score=51.52  Aligned_cols=21  Identities=14%  Similarity=-0.118  Sum_probs=15.0

Q ss_pred             cccccCCCCCCHHHHHHHHhh
Q 017258           77 DIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        77 ~C~iCgK~F~~~s~L~~H~rt   97 (374)
                      .|..|.+.|.+.+.|.+|+|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~  242 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRL  242 (493)
T ss_pred             hhhhccceecChHHHHHHHHh
Confidence            477777777777777777765

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.50  E-value=0.087  Score=51.69  Aligned_cols=59  Identities=17%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             CccccccCccccCCchhhHHHHh--hhccC--ccccCCCCCCCCCccccc--ccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVL--QVHKE--NVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r--~hH~e--kp~~cp~~kpgr~~~~C~--iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      ..+.|..|.+.|.+...|.+|.+  .|.++  ++            +.|.  .|++.|.+...+.+|...|.+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP------------FSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc------------eeeeccCCCccccccccccCCcccccCCCcc
Confidence            47899999999999999999999  67777  66            5555  8999999999999999998876543

>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]

Probab=90.19  E-value=27  Score=37.00  Aligned_cols=19  Identities=21%  Similarity=0.260  Sum_probs=14.8

Q ss_pred             hHHHhhccCceeecccccc
Q 017258          333 MEERRMSSVKYQVHDETSQ  351 (374)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~  351 (374)
                      |++|||+|=+..-.||-+.
T Consensus       541 m~ara~a~~i~~tkd~deD  559 (569)
T KOG3671|consen  541 MDARASALAIHSTKDEDED  559 (569)
T ss_pred             HHHHHHhhccccccccccc
Confidence            8999999998886555443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.66  E-value=0.34  Score=35.61  Aligned_cols=25  Identities=20%  Similarity=0.329  Sum_probs=17.6

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK   32 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      .-+.+. |.+|+..+.+..+|++|+.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHH
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHH
Confidence            345666 9999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=89.50  E-value=0.18  Score=50.27  Aligned_cols=23  Identities=30%  Similarity=0.885  Sum_probs=20.5

Q ss_pred             CccccCcCCCcccChHHHHHHhh
Q 017258           10 SKVWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        10 EKp~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      ++..|-+|.|.|..+..|+.|||
T Consensus       194 ~r~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHH
Confidence            34559999999999999999999

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=89.46  E-value=0.21  Score=39.71  Aligned_cols=37  Identities=22%  Similarity=0.503  Sum_probs=22.4

Q ss_pred             ChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhc
Q 017258           23 DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        23 ~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      ....+..+.+   ...|.|.+|++.|.....|..|++.++
T Consensus        35 ~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   35 DPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             --------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             cccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            3444444544   456999999999999999999998653

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=88.60  E-value=4  Score=45.13  Aligned_cols=7  Identities=43%  Similarity=0.615  Sum_probs=2.8

Q ss_pred             hhhhhhc
Q 017258          362 RISESRL  368 (374)
Q Consensus       362 ~~~~~~~  368 (374)
                      ||+++.+
T Consensus       694 ~ilDsKt  700 (1102)
T KOG1924|consen  694 RILDSKT  700 (1102)
T ss_pred             eecchHH
Confidence            3444433

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.53  E-value=0.29  Score=30.44  Aligned_cols=18  Identities=22%  Similarity=0.659  Sum_probs=8.3

Q ss_pred             ccccCccccCCchhhHHHH
Q 017258           37 KCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus        37 kC~~CgK~Fs~~s~L~rH~   55 (374)
                      .|..|+++| ..+.|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            344455554 334444444

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=87.17  E-value=0.4  Score=28.93  Aligned_cols=23  Identities=9%  Similarity=-0.018  Sum_probs=18.0

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhc
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      |+|..|..... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67899998877 889999999865

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.12  E-value=0.39  Score=31.39  Aligned_cols=22  Identities=18%  Similarity=0.522  Sum_probs=14.7

Q ss_pred             ccccccCccccCCchhhHHHHh
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVL   56 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r   56 (374)
                      .|.|++|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4567777777776666666663

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.46  E-value=0.42  Score=40.38  Aligned_cols=34  Identities=24%  Similarity=0.508  Sum_probs=26.9

Q ss_pred             CCCccccCcCCCcccChHHHHHHhhcCccccccCccccCCc
Q 017258            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA   48 (374)
Q Consensus         8 ~gEKp~C~~CgK~Fs~~s~Lk~H~ReKPfkC~~CgK~Fs~~   48 (374)
                      .|.|..|..||+.|-.   |+    ..|-.|.+||..|.-.
T Consensus         6 lGtKR~Cp~CG~kFYD---Ln----k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    6 LGTKRTCPSCGAKFYD---LN----KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCcccCCCCcchhcc---CC----CCCccCCCCCCccCcc
Confidence            3677779999999954   33    4688899999998877

The function of members of this family is unknown.

>COG5188 PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification]

Probab=85.95  E-value=0.65  Score=46.67  Aligned_cols=24  Identities=38%  Similarity=0.753  Sum_probs=19.9

Q ss_pred             CCccccCcCCCcccChHHHHHHhh
Q 017258            9 SSKVWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus         9 gEKp~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      .+++||.+|+|.|.+...+..|..
T Consensus       236 ~~~~YC~~C~r~f~~~~VFe~Hl~  259 (470)
T COG5188         236 FPKVYCVKCGREFSRSKVFEYHLE  259 (470)
T ss_pred             ccceeeHhhhhHhhhhHHHHHHHh
Confidence            357789999999999888877765

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=85.61  E-value=0.24  Score=46.28  Aligned_cols=80  Identities=19%  Similarity=0.241  Sum_probs=58.4

Q ss_pred             cCc--CCCcccChHHHHHHhh-cCccccccCccccCCchhhHHHHhhhccCc-cccCCCCCCCCCcccc--cccCCCCCC
Q 017258           14 CYY--CDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN-VTKVPNAKPGRESTDI--EIYGMQGIP   87 (374)
Q Consensus        14 C~~--CgK~Fs~~s~Lk~H~R-eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek-p~~cp~~kpgr~~~~C--~iCgK~F~~   87 (374)
                      |++  |-+.|....++..|.. -.--.|.+|.+.|-+...|..|+.-.|..- -..+   .-|.+-|+|  +.|+..|.+
T Consensus        82 cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~v---eRG~dMy~ClvEgCt~KFkT  158 (253)
T KOG4173|consen   82 CQVAGCCQVFDALDDYEHHYHTLHGNSCSFCKRAFPTGHLLDAHILEWHDSLFQALV---ERGQDMYQCLVEGCTEKFKT  158 (253)
T ss_pred             ccccchHHHHhhhhhHHHhhhhcccchhHHHHHhCCchhhhhHHHHHHHHHHHHHHH---HcCccHHHHHHHhhhhhhhh
Confidence            887  8888888887777766 334579999999999999999986655321 0001   123445888  789999998


Q ss_pred             HHHHHHHHh
Q 017258           88 PDVLAAHYG   96 (374)
Q Consensus        88 ~s~L~~H~r   96 (374)
                      ......|+-
T Consensus       159 ~r~RkdH~I  167 (253)
T KOG4173|consen  159 SRDRKDHMI  167 (253)
T ss_pred             hhhhhhHHH
Confidence            888888864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.16  E-value=0.69  Score=28.75  Aligned_cols=19  Identities=37%  Similarity=0.728  Sum_probs=16.0

Q ss_pred             ccCcCCCcccChHHHHHHhh
Q 017258           13 WCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      .|.+||+.| ..+.|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            399999999 5677899975

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=81.56  E-value=1.4  Score=44.10  Aligned_cols=78  Identities=19%  Similarity=0.249  Sum_probs=49.6

Q ss_pred             hHHHHHHhh---cC--ccccccCccccC-CchhhHHHHhhhccCccccCCC----C-------CCCCCcccccccCCCCC
Q 017258           24 EKILVQHQK---AK--HFKCHVCHKKLS-TAGGMAIHVLQVHKENVTKVPN----A-------KPGRESTDIEIYGMQGI   86 (374)
Q Consensus        24 ~s~Lk~H~R---eK--PfkC~~CgK~Fs-~~s~L~rH~r~hH~ekp~~cp~----~-------kpgr~~~~C~iCgK~F~   86 (374)
                      +..|.+|++   .+  .-+|.+|...+. .++....|.-..|+-.. +-+.    +       +..-..+.|-.|.|.|.
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lni-GlpDniVyvnelLehLkekL~r~~CLyCekifr  206 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNI-GLPDNIVYVNELLEHLKEKLERLRCLYCEKIFR  206 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhcc-CCCcceeeHHHHHHHHHHHHhhheeeeeccccC
Confidence            345566666   23  346999987654 34666677766665432 2221    0       12224488999999999


Q ss_pred             CHHHHHHHHhh--hcCCC
Q 017258           87 PPDVLAAHYGE--EEEEV  102 (374)
Q Consensus        87 ~~s~L~~H~rt--h~ge~  102 (374)
                      ++..|+.|||.  |.+-+
T Consensus       207 dkntLkeHMrkK~Hrrin  224 (423)
T KOG2482|consen  207 DKNTLKEHMRKKRHRRIN  224 (423)
T ss_pred             CcHHHHHHHHhccCcccC
Confidence            99999999986  44433

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=80.35  E-value=1.1  Score=38.98  Aligned_cols=38  Identities=13%  Similarity=0.192  Sum_probs=28.5

Q ss_pred             CCCccccCcCCCcccChHHHHHHhhcCccccccCccccCCchhhH
Q 017258            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMA   52 (374)
Q Consensus         8 ~gEKp~C~~CgK~Fs~~s~Lk~H~ReKPfkC~~CgK~Fs~~s~L~   52 (374)
                      .|.|..|..||+.|-.   |+    ..|-.|.+||..|.....++
T Consensus         6 lGtKr~Cp~cg~kFYD---Ln----k~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         6 LGTKRICPNTGSKFYD---LN----RRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             hCccccCCCcCccccc---cC----CCCccCCCcCCccCcchhhc
Confidence            3667779999999954   33    46889999999987664443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=80.23  E-value=0.99  Score=43.47  Aligned_cols=46  Identities=17%  Similarity=0.392  Sum_probs=34.4

Q ss_pred             cc-cCcCCCcccChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhc
Q 017258           12 VW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        12 p~-C~~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      +| |..||....- -.+-+|+.   ..-|.|..|++.|.+ ...+.|....+
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhhhhcc
Confidence            45 9999987653 45666876   667999999999999 66778874443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	374
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-06
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	3e-05
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	9e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	1e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	2e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	5e-04
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	4e-04
2cor_A	79	Pinch protein; LIM domain, particularly interestin	5e-04

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 CYYCDREFDDEKILVQHQ---KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN 62
          C YC   F   ++  +H+   + K   C  C +   ++  +  H ++VH +N
Sbjct: 45 CPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 45.5 bits (107), Expect = 3e-05
 Identities = 39/211 (18%), Positives = 61/211 (28%), Gaps = 17/211 (8%)

Query: 118  GGVVPGQLGVSYPPQSTL----GMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 173
            GGV P                  M  P+  S      AG         +    +      
Sbjct: 1468 GGVTPYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYG 1527

Query: 174  PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVP----PGMPSSTPPVTVSQPLFPVV 229
             A          P  +   P  S TSPA  P+        P    ++P  + + P +   
Sbjct: 1528 EAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 230  NNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSH 289
            + + +  S  +S   PS S    S           S + +  + SY   S      S S+
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPSY-------SPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640

Query: 290  SYASGPNTGGPSIGPP--PVIANKAPATQPA 318
            S  S   +       P  P  +  +P+  P 
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4 Length = 124

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 13  WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLST----------AGGMAIHVLQVHKEN 62
            C  C R F D   L  H ++K  K  +  K+LS           A GM  +V       
Sbjct: 52  RCLACARYFIDSTNLKTHFRSKDHKKRL--KQLSVEPYSQEEAERAAGMGSYVPPRRLAV 109

Query: 63  VTKVPNAKPGREST 76
            T+V    P  +++
Sbjct: 110 PTEVSTEVPEMDTS 123

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 35/144 (24%)

Query: 4   KKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
           ++  + ++++    DR ++D ++  ++        +V   +           L+      
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKY--------NVSRLQP-------YLKLR------ 141

Query: 64  TKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPG 123
             +   +P +   ++ I G+ G     +A        +V     KV          +   
Sbjct: 142 QALLELRPAK---NVLIDGVLGSGKTWVAL-------DV-CLSYKVQCKMD---FKIFWL 187

Query: 124 QLGVSYPPQSTLGMMQPIYSSAVP 147
            L     P++ L M+Q +     P
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDP 211

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 3  KKKKRVSSKVWCYYCDREFDDEKILVQHQKAKH--------FKCHVCHKKLSTAGGMAIH 54
          ++ K+V     C YC  +  D  +   H  ++H        + C  C+        ++ H
Sbjct: 10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69

Query: 55 VLQVHK-ENVTKVPNAKPGREST 76
           L+ H  E   K+   K   ++ 
Sbjct: 70 NLKYHPGEENFKLTMVKRNNQTI 92

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 18/132 (13%), Positives = 29/132 (21%), Gaps = 5/132 (3%)

Query: 114 PQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 173
            Q      P Q    + P          Y      P    P   + Q   P    +    
Sbjct: 14  LQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQI 73

Query: 174 PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNT 233
             A             +  P     +  +QP   V  G P       ++ P +   +   
Sbjct: 74  DQATTSMNDMHLHNVPLVDP-----NAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAM 128

Query: 234 TSQSSLFSAPIP 245
                  +   P
Sbjct: 129 GQNMRPMNQLYP 140

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 4/126 (3%)

Query: 129 YPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 188
           YP       +Q   ++     PA +  P  P      +  + +PP  AV    Q  F   
Sbjct: 9   YPQA----QLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTP 64

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTS 248
                           + +    +P   P   +   +   +      Q    +AP     
Sbjct: 65  AQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQP 124

Query: 249 IALSSS 254
            A    
Sbjct: 125 SAAMGQ 130

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.3 bits (96), Expect = 5e-04
 Identities = 12/127 (9%), Positives = 23/127 (18%)

Query: 122 PGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQ 181
             QL             Q +           +     P                A     
Sbjct: 11  QAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLH 70

Query: 182 QPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFS 241
           Q +         +     P + P+  + P +P         Q             +++  
Sbjct: 71  QQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQ 130

Query: 242 APIPSTS 248
              P   
Sbjct: 131 NMRPMNQ 137

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 128  SYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPV 187
             +          P+          G+          P     S   P         + P 
Sbjct: 1495 GFVGSPDAAAFSPLVQGGSE-GREGFGDYGLLGAASPYKGVQS---PGYTSPFSSAMSPG 1550

Query: 188  QNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPS- 246
              +  P  S +SP    SP   P  PS +P      P  P  + + TS S   ++P  S 
Sbjct: 1551 YGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSP--SYSPTSPSYSPTSPSYSA 1608

Query: 247  TSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPP 306
            TS + S ++    S    S + +  + SY   S      S S+S  S P+    S    P
Sbjct: 1609 TSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPTSPSYSP 1664

Query: 307  VIANKAPATQ 316
               + +P + 
Sbjct: 1665 TSPSYSPTSP 1674

>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 Length = 79

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 3  KKKKRVSSKVWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAG 49
           +K R   K  C  C    D++ ++ ++      HF C  C K+L+   
Sbjct: 7  GEKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADA 55

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	374
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.67
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.65
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.6
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.58
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.57
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.56
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.56
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.55
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.55
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.54
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.51
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.45
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.43
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.43
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.42
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.4
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.39
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.38
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.38
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.37
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.3
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.25
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.22
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.21
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.21
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.19
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.1
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.1
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.07
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.03
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.02
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.01
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.01
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.99
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.97
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.96
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.95
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.94
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.94
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.9
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.84
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.79
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.7
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.69
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.69
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.69
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.68
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.68
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.68
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.68
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.68
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.67
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.67
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.67
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.67
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.66
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.66
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.65
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.65
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.64
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.63
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.62
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.6
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.59
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.57
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.55
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.55
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.54
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.54
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.54
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.53
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.52
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.52
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.51
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.5
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.5
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.5
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.5
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.5
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.49
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.49
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.49
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.49
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.48
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.47
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.46
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.46
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.46
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.45
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.44
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.44
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.43
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.43
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.42
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.41
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.37
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.37
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.37
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.35
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.35
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.34
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.33
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.33
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.33
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.32
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.32
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.32
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.32
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.32
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.32
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.31
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.31
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.31
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.31
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.31
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.31
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.31
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.3
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.3
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.3
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.3
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.3
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.28
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.28
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.27
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.27
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.27
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.24
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.23
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.22
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.2
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.19
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.18
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.18
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.16
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.16
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.15
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.14
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.14
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.13
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.13
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.42
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.13
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.1
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.1
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.1
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.1
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.1
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.1
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.08
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.08
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.33
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.06
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.03
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.03
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.02
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.01
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.97
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.92
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.87
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.09
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.81
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.79
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.79
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.76
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.74
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.69
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.68
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.67
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.66
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.66
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.64
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.62
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.6
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.6
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.58
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.52
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.51
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.5
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.5
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.46
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.45
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.43
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.43
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.39
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.39
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.37
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.37
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.36
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.46
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.32
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.26
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.26
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.34
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.24
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.22
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.3
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.96
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.93
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.4
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.28
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.73
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.47
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.51
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.81
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	88.36
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.99
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.37
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.05

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.72  E-value=4e-18  Score=146.21  Aligned_cols=84  Identities=20%  Similarity=0.306  Sum_probs=79.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      ||+.| |.+|++.|.+...|++|++    +|+|+|.+|++.|.+...|.+|+++|.++++            |.|++||+
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k   86 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR------------YQCLACGK   86 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC------------EEESSSCC
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcc------------ccCCCCCC
Confidence            78888 9999999999999999999    8999999999999999999999999988876            99999999


Q ss_pred             CCCCHHHHHHHHhhhcCCCcc
Q 017258           84 QGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        84 ~F~~~s~L~~H~rth~ge~~~  104 (374)
                      .|.....|.+|+++|+++.+.
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTT
T ss_pred             CcCCHHHHHHHhHHhcCCCCC
Confidence            999999999999999877543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=2e-17  Score=133.35  Aligned_cols=84  Identities=21%  Similarity=0.402  Sum_probs=78.1

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      .++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~   81 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP------------FKCQECGK   81 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT------------TSCSSSCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC------------eECCCcCC
Confidence            56667 9999999999999999998    7999999999999999999999999988876            89999999


Q ss_pred             CCCCHHHHHHHHhhhcCCCcc
Q 017258           84 QGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        84 ~F~~~s~L~~H~rth~ge~~~  104 (374)
                      .|.....|.+|+++|.++.+.
T Consensus        82 ~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           82 GFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             CCSSHHHHHHHHHHTTSCCCC
T ss_pred             cccCHHHHHHHHHHhCCCCCC
Confidence            999999999999999988754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.5e-17  Score=129.36  Aligned_cols=84  Identities=19%  Similarity=0.311  Sum_probs=77.6

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCg   82 (374)
                      .+++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|.+|+
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   71 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP------------FKCQICP   71 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC------------EECSSSS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC------------ccCCCCC
Confidence            356777 9999999999999999999    7899999999999999999999999988876            9999999


Q ss_pred             CCCCCHHHHHHHHhhhcCCCc
Q 017258           83 MQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        83 K~F~~~s~L~~H~rth~ge~~  103 (374)
                      +.|.....|.+|+++|+++..
T Consensus        72 ~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           72 YASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CEESSHHHHHHHHTTCCSCCC
T ss_pred             CccCCHHHHHHHHHHhcCCCC
Confidence            999999999999999988653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.67  E-value=5.3e-17  Score=126.66  Aligned_cols=82  Identities=22%  Similarity=0.416  Sum_probs=73.8

Q ss_pred             CCccc-cC--cCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccccc
Q 017258            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (374)
Q Consensus         9 gEKp~-C~--~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iC   81 (374)
                      ++|.| |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|.+|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC------------ccCCCC
Confidence            35677 98  59999999999999998    8999999999999999999999999998876            999999


Q ss_pred             CCCCCCHHHHHHHHhhhcCCC
Q 017258           82 GMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        82 gK~F~~~s~L~~H~rth~ge~  102 (374)
                      ++.|...+.|.+|+++|.++.
T Consensus        69 ~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           69 GRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEESSHHHHHHHHGGGGC--
T ss_pred             CchhCCHHHHHHHHHHhcccC
Confidence            999999999999999998864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.3e-16  Score=129.32  Aligned_cols=84  Identities=10%  Similarity=0.042  Sum_probs=76.5

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~   84 (374)
                      .+++.| |.+|++.|.....|.+|++  +++|+|.+|++.|.+...|.+|++ |+++++            |+|++|++.
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~------------~~C~~C~~~   78 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK------------LTCLECMRT   78 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG------------GEEGGGTEE
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC------------ccCccccch
Confidence            367777 9999999999999999999  899999999999999999999995 887776            999999999


Q ss_pred             CCCHHHHHHHHh-hhcCCCcc
Q 017258           85 GIPPDVLAAHYG-EEEEEVPS  104 (374)
Q Consensus        85 F~~~s~L~~H~r-th~ge~~~  104 (374)
                      |.....|.+|++ .|.++...
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCC
Confidence            999999999997 78776654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.65  E-value=1.2e-16  Score=122.37  Aligned_cols=76  Identities=18%  Similarity=0.357  Sum_probs=71.5

Q ss_pred             ccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCH
Q 017258           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPP   88 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~   88 (374)
                      .|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~   70 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------------HKCQVCGKAFSQS   70 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC------------EECTTTSCEESSH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC------------CcCCCcchhhCCh
Confidence            39999999999999999998    8999999999999999999999999998876            9999999999999


Q ss_pred             HHHHHHHhhhcC
Q 017258           89 DVLAAHYGEEEE  100 (374)
Q Consensus        89 s~L~~H~rth~g  100 (374)
                      +.|.+|+++|+|
T Consensus        71 ~~l~~H~~~H~g   82 (82)
T 2kmk_A           71 SNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHhhCC
Confidence            999999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=124.80  Aligned_cols=82  Identities=23%  Similarity=0.308  Sum_probs=74.4

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccC--ccccCCCCCCCCCccccccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE--NVTKVPNAKPGRESTDIEIY   81 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e--kp~~cp~~kpgr~~~~C~iC   81 (374)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++  ++            |.|.+|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------~~C~~C   71 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP------------YICQSC   71 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS------------BCCSSS
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc------------eECCCc
Confidence            56677 9999999999999999999    79999999999999999999999999886  44            999999


Q ss_pred             CCCCCCHHHHHHHHh-hhcCCC
Q 017258           82 GMQGIPPDVLAAHYG-EEEEEV  102 (374)
Q Consensus        82 gK~F~~~s~L~~H~r-th~ge~  102 (374)
                      ++.|.....|.+|++ .|.++.
T Consensus        72 ~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           72 GKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             CCCBSSHHHHHHHHHHTSCCCS
T ss_pred             cchhCCHHHHHHHHHHhcCCCC
Confidence            999999999999986 676643

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.6e-16  Score=129.04  Aligned_cols=81  Identities=17%  Similarity=0.297  Sum_probs=75.2

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      +++.| | +|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~   73 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP------------YECNICAK   73 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC------------EECSSSCC
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC------------eeCCCCcc
Confidence            67777 9 99999999999999999    7899999999999999999999999988876            99999999


Q ss_pred             CCCCHHHHHHHHhhhcCCC
Q 017258           84 QGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        84 ~F~~~s~L~~H~rth~ge~  102 (374)
                      .|.....|.+|+++|+...
T Consensus        74 ~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           74 RFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             EESCHHHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHccccc
Confidence            9999999999999987643

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.60  E-value=4.1e-16  Score=138.49  Aligned_cols=97  Identities=27%  Similarity=0.416  Sum_probs=67.9

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCC-------------
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK-------------   70 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~k-------------   70 (374)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++|.|..|.             
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence            44555 7777777777777777776    67777777777777777777777777777777776541             


Q ss_pred             ---CCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           71 ---PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        71 ---pgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                         .+++.|.|.+|++.|.....|.+|+++|.++.+.+
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  163 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK  163 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeE
Confidence               23455777777777777777777777777665544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.6e-15  Score=124.53  Aligned_cols=89  Identities=20%  Similarity=0.257  Sum_probs=66.3

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhh---ccCccccCCCC-----------
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV---HKENVTKVPNA-----------   69 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~h---H~ekp~~cp~~-----------   69 (374)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.+   .++++|.|..|           
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            45566 9999999999999999988    78899999999999999999998764   45566555543           


Q ss_pred             -----CCCCCcccccccCCCCCCHHHHHHHHhh
Q 017258           70 -----KPGRESTDIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        70 -----kpgr~~~~C~iCgK~F~~~s~L~~H~rt   97 (374)
                           +.+++.|.|.+|++.|.....|.+|++.
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence                 1233446666666666666666666653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=6.4e-16  Score=115.32  Aligned_cols=58  Identities=16%  Similarity=0.170  Sum_probs=50.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      ||||+|.+|+|+|.+.+.|.+|+++|.++++            |.|.+||+.|...+.|.+|+++|.|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp------------~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP------------RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC------------EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC------------eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999988888876            888899999999999999999988763

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=3.2e-15  Score=118.64  Aligned_cols=80  Identities=18%  Similarity=0.363  Sum_probs=73.2

Q ss_pred             CCccc-cCc--CCCcccChHHHHHHhh----cCccccc--cCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc
Q 017258            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (374)
Q Consensus         9 gEKp~-C~~--CgK~Fs~~s~Lk~H~R----eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~   79 (374)
                      .++.+ |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|+++|+++++            |.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~   79 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP------------FQCG   79 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS------------CBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC------------eECC
Confidence            34556 997  9999999999999999    7999996  699999999999999999998876            9999


Q ss_pred             ccCCCCCCHHHHHHHHhhhcC
Q 017258           80 IYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        80 iCgK~F~~~s~L~~H~rth~g  100 (374)
                      +|++.|.....|.+|+++|.+
T Consensus        80 ~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           80 VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.57  E-value=3e-15  Score=122.28  Aligned_cols=85  Identities=18%  Similarity=0.343  Sum_probs=73.3

Q ss_pred             CCccc-cCc--CCCcccChHHHHHHhh----cCccccc--cCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc
Q 017258            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (374)
Q Consensus         9 gEKp~-C~~--CgK~Fs~~s~Lk~H~R----eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~   79 (374)
                      +++.| |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~   70 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP------------FQCK   70 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC------------EECT
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC------------ccCC
Confidence            46667 997  9999999999999998    7999999  799999999999999999988876            7778


Q ss_pred             ccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           80 IYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        80 iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|++.|.....|.+|+++|.++...+
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (119)
T 2jp9_A           71 TCQRKFSRSDHLKTHTRTHTGEKPFS   96 (119)
T ss_dssp             TTCCEESCHHHHHHHHHHHHTCCCEE
T ss_pred             ccCchhCCHHHHHHHHHHhcCCCCee
Confidence            88888888888888888887766543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.56  E-value=5.8e-15  Score=126.70  Aligned_cols=95  Identities=16%  Similarity=0.130  Sum_probs=76.1

Q ss_pred             ccc-cCcCCCcccChHHHHHHhh-----cCc--------cccccCccccCCchhhHHHHhhhccCccccCCC--C-----
Q 017258           11 KVW-CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--A-----   69 (374)
Q Consensus        11 Kp~-C~~CgK~Fs~~s~Lk~H~R-----eKP--------fkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~--~-----   69 (374)
                      +.+ |.+|++.|.+...|.+|++     +++        |+|.+|++.|.+...|.+|+++|+++++|.|..  |     
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            344 8888888888888888877     222        788888888888888888888888888887764  4     


Q ss_pred             -----------CCCCCcccccc--cCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           70 -----------KPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        70 -----------kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                                 +.+.+.|.|.+  |++.|.....|.+|+++|+++.+.+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence                       23456699987  9999999999999999998876653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.56  E-value=2.1e-15  Score=133.88  Aligned_cols=95  Identities=25%  Similarity=0.377  Sum_probs=46.1

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCC--------------
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK--------------   70 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~k--------------   70 (374)
                      ++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++|.|..|.              
T Consensus        19 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   98 (190)
T 2i13_A           19 EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR   98 (190)
T ss_dssp             ------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH
Confidence            4444 6666666665555655555    45556666666666655666665555555555555431              


Q ss_pred             --CCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           71 --PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        71 --pgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                        .+++.|.|.+|++.|.....|.+|+++|.++...
T Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  134 (190)
T 2i13_A           99 THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPY  134 (190)
T ss_dssp             HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCe
Confidence              1233455555555555555555555555554443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=3.7e-15  Score=121.87  Aligned_cols=83  Identities=12%  Similarity=0.089  Sum_probs=73.7

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh------cCcc-ccccCcccc--CCchhhHHHHhhhccCccccCCCCCCCCCccc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK------AKHF-KCHVCHKKL--STAGGMAIHVLQVHKENVTKVPNAKPGRESTD   77 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R------eKPf-kC~~CgK~F--s~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~   77 (374)
                      .+++.| |.+|++.|.+...|.+|++      ++++ +|.+|++.|  .+...|.+|+++|+++++            |.
T Consensus        15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~------------~~   82 (115)
T 2dmi_A           15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV------------LK   82 (115)
T ss_dssp             CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS------------CB
T ss_pred             CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc------------eE
Confidence            367788 9999999999999999987      3544 599999999  999999999999888876            99


Q ss_pred             ccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           78 IEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        78 C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      |++|++.|.....|.+|+++|+...
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999977653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.55  E-value=7.6e-15  Score=130.27  Aligned_cols=106  Identities=21%  Similarity=0.245  Sum_probs=85.7

Q ss_pred             CCCCCCCCCCccc-c--CcCCCcccChHHHHHHhh----cCcccc--ccCccccCCchhhHHHHhhhccCccccCC--CC
Q 017258            1 MGKKKKRVSSKVW-C--YYCDREFDDEKILVQHQK----AKHFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVP--NA   69 (374)
Q Consensus         1 mgkKk~~~gEKp~-C--~~CgK~Fs~~s~Lk~H~R----eKPfkC--~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp--~~   69 (374)
                      |+.++....++.| |  ..|++.|.....|.+|++    +++|+|  ..|++.|.+...|.+|+++|+++++|.|.  .|
T Consensus         1 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             ---------CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSC
T ss_pred             CccccccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCC
Confidence            6677777677777 9  679999999999999998    899999  88999999999999999999999999998  43


Q ss_pred             -----------------C-CCCCcccc--cccCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           70 -----------------K-PGRESTDI--EIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        70 -----------------k-pgr~~~~C--~iCgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                                       + .+.+.|.|  .+|++.|.....|.+|+++|.++.+.+.
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C  137 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC  137 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBC
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccC
Confidence                             2 34567999  8999999999999999999998876654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.54  E-value=4.4e-15  Score=122.57  Aligned_cols=93  Identities=15%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             ccc-cC--cCCCcccChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhccCccccCCC--C-------------
Q 017258           11 KVW-CY--YCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--A-------------   69 (374)
Q Consensus        11 Kp~-C~--~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~--~-------------   69 (374)
                      +.| |.  .|++.|.....|.+|++   +++|+|.+|++.|.+...|.+|++.|+++++|.|..  |             
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            344 66  57777777777777766   566777777777777777777777666666655542  2             


Q ss_pred             ---CCCCCccccc--ccCCCCCCHHHHHHHHhhhcCCCc
Q 017258           70 ---KPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        70 ---kpgr~~~~C~--iCgK~F~~~s~L~~H~rth~ge~~  103 (374)
                         +.+++.|.|.  .|++.|.....|.+|+++|.++..
T Consensus        84 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence               1123447774  588888888888888888877643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.53  E-value=6.3e-15  Score=120.35  Aligned_cols=78  Identities=24%  Similarity=0.422  Sum_probs=72.3

Q ss_pred             CCccc-cC--cCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccc--c
Q 017258            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI--E   79 (374)
Q Consensus         9 gEKp~-C~--~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C--~   79 (374)
                      +++.+ |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|  .
T Consensus        33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~  100 (119)
T 2jp9_A           33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP------------FSCRWP  100 (119)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC------------EECCST
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCC------------eeCCCC
Confidence            45667 99  69999999999999999    8999999999999999999999999998876            888  7


Q ss_pred             ccCCCCCCHHHHHHHHhhh
Q 017258           80 IYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        80 iCgK~F~~~s~L~~H~rth   98 (374)
                      +|++.|.....|.+|+++|
T Consensus       101 ~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          101 SCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCCEESSHHHHHHHHHTC
T ss_pred             CCccccCCHHHHHHHHhcC
Confidence            9999999999999999876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=7.5e-15  Score=114.06  Aligned_cols=75  Identities=19%  Similarity=0.309  Sum_probs=70.4

Q ss_pred             cccCc--CCCcccChHHHHHHhh----cCccccc--cCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258           12 VWCYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus        12 p~C~~--CgK~Fs~~s~Lk~H~R----eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      +.|.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.+|++
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~   73 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP------------FQCQKCDR   73 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC------------EECSSSSC
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCc
Confidence            44999  9999999999999999    8899997  599999999999999999998876            99999999


Q ss_pred             CCCCHHHHHHHHhhh
Q 017258           84 QGIPPDVLAAHYGEE   98 (374)
Q Consensus        84 ~F~~~s~L~~H~rth   98 (374)
                      .|...+.|.+|+++|
T Consensus        74 ~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           74 AFSRSDHLALHMKRH   88 (89)
T ss_dssp             EESSHHHHHHHGGGG
T ss_pred             ccCCHHHHHHHHHhh
Confidence            999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=6.6e-16  Score=121.06  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=72.3

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCC
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~   84 (374)
                      ||+| |.+|++.|.....|.+|++    +++|+|.+|++.|.+.+.|.+|++.||+..             |.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~-------------~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP-------------ILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHH-------------HHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCc-------------chHHHHHHH
Confidence            4667 9999999999999999999    899999999999999999999999998643             899999999


Q ss_pred             CCCHHHHHHHHhhhcCC
Q 017258           85 GIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        85 F~~~s~L~~H~rth~ge  101 (374)
                      |.....|..|++.+++.
T Consensus        68 f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           68 LSKNYHLENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHHH
Confidence            99999999999876543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.51  E-value=7.9e-15  Score=109.38  Aligned_cols=53  Identities=17%  Similarity=0.465  Sum_probs=49.9

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      ||+| |.+|||.|.+..+|++|++    +|+|+|.+|+++|.+.++|.+|+++|.+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7888 9999999999999999999    999999999999999999999999988764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.49  E-value=2.7e-14  Score=117.84  Aligned_cols=81  Identities=21%  Similarity=0.343  Sum_probs=58.3

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCcccccc--CccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc-c
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-I   80 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~-i   80 (374)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|+++|+++++|.|+.       -.|. .
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-------~~C~~~  103 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF-------DGCNKK  103 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCS-------TTCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCC-------CCCCCc
Confidence            45566 8888888888888888888    78888875  8888888888888888888888888852       1343 2


Q ss_pred             cCCCCCCHHHHHHHHh
Q 017258           81 YGMQGIPPDVLAAHYG   96 (374)
Q Consensus        81 CgK~F~~~s~L~~H~r   96 (374)
                      ......-...++.|..
T Consensus       104 f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C          104 FAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CSSTTTTHHHHHHHC-
T ss_pred             cCCHHHHHHHHHHHcc
Confidence            3333344455666643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4.1e-14  Score=113.75  Aligned_cols=73  Identities=19%  Similarity=0.117  Sum_probs=62.7

Q ss_pred             cccChHHHHHHhh----cCccccccCccccC-CchhhHHHHhhhcc-CccccCCCCCCCCCcccccccCCCCCCHHHHHH
Q 017258           20 EFDDEKILVQHQK----AKHFKCHVCHKKLS-TAGGMAIHVLQVHK-ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAA   93 (374)
Q Consensus        20 ~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs-~~s~L~rH~r~hH~-ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~   93 (374)
                      .|.....+.+|++    +|+|+|.+|++.|. +...|.+|+++|++ +++            |.|.+|++.|.....|.+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~------------~~C~~C~k~F~~~~~L~~   72 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA------------LKCQHCRKQFKSKAGLNY   72 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH------------HSCSSSCCCCSCHHHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC------------EECCCCCCccCCHHHHHH
Confidence            3444444555655    89999999999999 99999999999998 776            899999999999999999


Q ss_pred             HHhhhcCCCcc
Q 017258           94 HYGEEEEEVPS  104 (374)
Q Consensus        94 H~rth~ge~~~  104 (374)
                      |+++|+++.+.
T Consensus        73 H~~~h~~~kp~   83 (98)
T 2gqj_A           73 HTMAEHSAKPS   83 (98)
T ss_dssp             HHHHHSCSCSS
T ss_pred             HHHHHcCCCCC
Confidence            99999988764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8e-14  Score=106.20  Aligned_cols=66  Identities=24%  Similarity=0.382  Sum_probs=60.3

Q ss_pred             CCccc-cCc--CCCcccChHHHHHHhh-----cCcccccc--CccccCCchhhHHHHhhhccCccccCCCCCCCCCcccc
Q 017258            9 SSKVW-CYY--CDREFDDEKILVQHQK-----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (374)
Q Consensus         9 gEKp~-C~~--CgK~Fs~~s~Lk~H~R-----eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C   78 (374)
                      +++.| |..  |++.|.+...|++|++     +++|+|.+  |++.|.+...|.+|+++|+++++            |.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C   71 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD------------YIC   71 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC------------CSC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC------------eeC
Confidence            56667 887  9999999999999986     89999999  99999999999999999998886            889


Q ss_pred             cccCCCCC
Q 017258           79 EIYGMQGI   86 (374)
Q Consensus        79 ~iCgK~F~   86 (374)
                      ++|++.|.
T Consensus        72 ~~C~k~F~   79 (79)
T 2dlk_A           72 EFSGPSSG   79 (79)
T ss_dssp             CSSSCCCC
T ss_pred             CCCCCCCC
Confidence            99999983

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.43  E-value=1e-13  Score=118.38  Aligned_cols=92  Identities=20%  Similarity=0.297  Sum_probs=72.5

Q ss_pred             CCccc-cCc-----CCCcccChHHHHHHhh----cCcccccc--CccccCCchhhHHHHhhhccCccccCCC--C-----
Q 017258            9 SSKVW-CYY-----CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN--A-----   69 (374)
Q Consensus         9 gEKp~-C~~-----CgK~Fs~~s~Lk~H~R----eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~--~-----   69 (374)
                      +++.+ |.+     |++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|++.|+++++|.|..  |     
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  110 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS  110 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEES
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccC
Confidence            44555 764     3588999999999988    78899985  9999999999999999888888877764  3     


Q ss_pred             ------------CCCCCcccccc--cCCCCCCHHHHHHHHhhhcC
Q 017258           70 ------------KPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        70 ------------kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~g  100 (374)
                                  +.+++.|.|.+  |++.|.....|.+|+++|+|
T Consensus       111 ~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                        23455688877  88888888888888887764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.43  E-value=9.9e-14  Score=118.73  Aligned_cols=74  Identities=19%  Similarity=0.376  Sum_probs=66.2

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      +++.| |.+|++.|.+...|.+|++    +|+|+|.+|++.|.+.+.|.+|+++||+++++.|.      +.|+|++|++
T Consensus        47 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~------k~~~C~~C~k  120 (133)
T 2lt7_A           47 WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDS------KLYRLHPCRS  120 (133)
T ss_dssp             CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSS------CCEEECCCCS
T ss_pred             CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCC------CCeecCCCCc
Confidence            67778 9999999999999999998    89999999999999999999999999999875442      3499999999


Q ss_pred             CCCCH
Q 017258           84 QGIPP   88 (374)
Q Consensus        84 ~F~~~   88 (374)
                      .|...
T Consensus       121 ~~~~~  125 (133)
T 2lt7_A          121 LQIRQ  125 (133)
T ss_dssp             SCCCC
T ss_pred             hhhhc
Confidence            88754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.42  E-value=1.3e-13  Score=105.76  Aligned_cols=71  Identities=20%  Similarity=0.307  Sum_probs=65.9

Q ss_pred             c--CcCCCcccChHHHHHHhh----cCcccccc--CccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccc---cC
Q 017258           14 C--YYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI---YG   82 (374)
Q Consensus        14 C--~~CgK~Fs~~s~Lk~H~R----eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i---Cg   82 (374)
                      |  .+|++.|.....|++|++    +++|+|.+  |++.|.+...|.+|+++|++               |.|.+   |+
T Consensus         4 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------~~C~~~~~C~   68 (85)
T 2j7j_A            4 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---------------YPCKKDDSCS   68 (85)
T ss_dssp             CCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---------------EECCSCSSCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---------------CCCCCCCCCC
Confidence            9  889999999999999998    89999998  99999999999999998876               56777   99


Q ss_pred             CCCCCHHHHHHHHhhhc
Q 017258           83 MQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        83 K~F~~~s~L~~H~rth~   99 (374)
                      +.|.....|.+|+++|+
T Consensus        69 ~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           69 FVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CEESSHHHHHHHHHHCC
T ss_pred             CccCCHHHHHHHHHhcC
Confidence            99999999999999874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.4e-13  Score=103.70  Aligned_cols=57  Identities=19%  Similarity=0.417  Sum_probs=41.7

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCcccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~   65 (374)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++|.
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            45556 7777777777777777777    677777777777777777777777777776643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.39  E-value=8.6e-14  Score=116.10  Aligned_cols=76  Identities=12%  Similarity=0.142  Sum_probs=66.5

Q ss_pred             ccCcCCCccc------ChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258           13 WCYYCDREFD------DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus        13 ~C~~CgK~Fs------~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      +|.+|++.|.      ....|..|++   +|+|+|.+|++.|.+...|.+|+++|  +++            |.|.+|++
T Consensus        43 ~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~------------~~C~~C~k  108 (129)
T 2wbt_A           43 IRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT------------KVCPVCKK  108 (129)
T ss_dssp             HHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC------------CBCTTTCC
T ss_pred             cchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC------------CCCCCCCc
Confidence            3777766655      7788888887   99999999999999999999999887  655            89999999


Q ss_pred             CCCCHHHHHHHHhhhcCCC
Q 017258           84 QGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        84 ~F~~~s~L~~H~rth~ge~  102 (374)
                      .|...+.|.+|+++|++..
T Consensus       109 ~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          109 EFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             BCSSHHHHHHHHHHTTCCC
T ss_pred             ccCCHHHHHHHHHHHCCcc
Confidence            9999999999999998753

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.9e-13  Score=114.16  Aligned_cols=95  Identities=21%  Similarity=0.225  Sum_probs=75.4

Q ss_pred             ccc-cCcCCCcccChHHHHHHhh-------cCcccccc-----CccccCCchhhHHHHhhhccCccccCCC--C------
Q 017258           11 KVW-CYYCDREFDDEKILVQHQK-------AKHFKCHV-----CHKKLSTAGGMAIHVLQVHKENVTKVPN--A------   69 (374)
Q Consensus        11 Kp~-C~~CgK~Fs~~s~Lk~H~R-------eKPfkC~~-----CgK~Fs~~s~L~rH~r~hH~ekp~~cp~--~------   69 (374)
                      ..+ |..|++.|.+...|.+|++       +++|+|.+     |++.|.+...|.+|++.|+++++|.|..  |      
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            345 9999999999999999986       68899875     3499999999999999999999877762  3      


Q ss_pred             ----------CCCCCcccccc--cCCCCCCHHHHHHHH-hhhcCCCccc
Q 017258           70 ----------KPGRESTDIEI--YGMQGIPPDVLAAHY-GEEEEEVPSK  105 (374)
Q Consensus        70 ----------kpgr~~~~C~i--CgK~F~~~s~L~~H~-rth~ge~~~k  105 (374)
                                +.+.+.|.|.+  |++.|.....|.+|+ +.|.++.+.+
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~  130 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYV  130 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEE
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCee
Confidence                      23455677777  888887777788887 6677665543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.38  E-value=6.2e-13  Score=117.89  Aligned_cols=91  Identities=22%  Similarity=0.323  Sum_probs=59.3

Q ss_pred             Cccc-c--CcCCCcccChHHHHHHhh----cCccccc--cCccccCCchhhHHHHhhhc--cCccccC--CCC-------
Q 017258           10 SKVW-C--YYCDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVH--KENVTKV--PNA-------   69 (374)
Q Consensus        10 EKp~-C--~~CgK~Fs~~s~Lk~H~R----eKPfkC~--~CgK~Fs~~s~L~rH~r~hH--~ekp~~c--p~~-------   69 (374)
                      ++.| |  .+|++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.+|  ++++|.|  ..|       
T Consensus        40 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~  119 (190)
T 1tf6_A           40 EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH  119 (190)
T ss_dssp             CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSH
T ss_pred             CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCH
Confidence            4444 6  556666666666666666    5666666  56666666666666663333  3445555  433       


Q ss_pred             ---------CCCCCcccccc--cCCCCCCHHHHHHHHhhhcC
Q 017258           70 ---------KPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        70 ---------kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~g  100 (374)
                               +.+++.|.|.+  |++.|.....|.+|+++|.+
T Consensus       120 ~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          120 NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence                     23445588866  88888888888888888876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.1e-13  Score=102.49  Aligned_cols=65  Identities=26%  Similarity=0.447  Sum_probs=51.2

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----c----CccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----A----KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----e----KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~   79 (374)
                      +++.| |.+|++.|.+...|.+|++    +    ++|+|.+|++.|.+...|.+|+++|++++.            +.|+
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~------------~~~~   79 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG------------VEGE   79 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS------------CCCC
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC------------cccC
Confidence            56777 8888888888888888876    2    678888888888888888888888887766            6677


Q ss_pred             ccCCCC
Q 017258           80 IYGMQG   85 (374)
Q Consensus        80 iCgK~F   85 (374)
                      .|+..|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            777654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=6.6e-13  Score=100.49  Aligned_cols=58  Identities=26%  Similarity=0.319  Sum_probs=40.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +++|+|.+|++.|.+...|.+|+++|+++++            |+|.+|++.|.....|.+|+++|.+++
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKP------------YRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS------------EECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCC------------EECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            5667777777777777777777766666654            666777777777777777777776654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=9.4e-13  Score=106.28  Aligned_cols=71  Identities=14%  Similarity=0.136  Sum_probs=63.8

Q ss_pred             CCcccChHHHHHHhh----cCccccccCcccc-CCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHH
Q 017258           18 DREFDDEKILVQHQK----AKHFKCHVCHKKL-STAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (374)
Q Consensus        18 gK~Fs~~s~Lk~H~R----eKPfkC~~CgK~F-s~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~   92 (374)
                      ...|.....|..|++    +++|+|.+|++.| .+..+|.+|+++| ++++            |.|++|+|.|.....|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~------------~~C~~Cgk~F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM------------FTCHHCGKQLRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC------------CCCSSSCCCCSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC------------eECCCCCCeeCCHHHHH
Confidence            456778888888887    8999999999999 9999999999998 8776            89999999999999999


Q ss_pred             HH-HhhhcCC
Q 017258           93 AH-YGEEEEE  101 (374)
Q Consensus        93 ~H-~rth~ge  101 (374)
                      +| +++|.++
T Consensus        80 ~H~~~~H~~~   89 (96)
T 2ctd_A           80 YHVMANHNSL   89 (96)
T ss_dssp             HHHHHHTCCC
T ss_pred             HHhHHhcCCC
Confidence            99 8888764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=6.9e-13  Score=100.38  Aligned_cols=56  Identities=21%  Similarity=0.489  Sum_probs=52.2

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+++.| |.+|++.|.+...|.+|++    +++|+|.+|++.|.+...|.+|+++|+++++
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            356777 9999999999999999999    8999999999999999999999999999876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=1.6e-13  Score=109.22  Aligned_cols=58  Identities=19%  Similarity=0.232  Sum_probs=49.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHH-hhhcCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEEV  102 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~-rth~ge~  102 (374)
                      ++.|.|.+|+|.|.++..|.+|+++|+++++            |.|++|++.|...+.|.+|+ +.|.+|+
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQV------------FPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSS------------EECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCc------------cCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            7788999999999999999999988888876            88899999999999999996 4576654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9e-13  Score=98.67  Aligned_cols=58  Identities=16%  Similarity=0.220  Sum_probs=31.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|.....|.+|+++|+++.
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRP------------FKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCS------------EECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC------------EeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            4555555555555555555555555544443            555555555555555555555555443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.1e-13  Score=99.32  Aligned_cols=61  Identities=18%  Similarity=0.115  Sum_probs=45.5

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      |..+|+|+|.+|++.|.+...|.+|+++|+++++            |+|.+|++.|.....|.+|+++|.++.
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------YKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC------------EECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC------------eECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3337777888888888888888888777776665            777778888888888888887777654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.3e-12  Score=97.85  Aligned_cols=55  Identities=20%  Similarity=0.425  Sum_probs=52.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +++.| |.+|++.|.+...|.+|++    +++|+|.+|++.|.+...|.+|+++||++++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            56777 9999999999999999999    8999999999999999999999999999875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.5e-12  Score=99.25  Aligned_cols=60  Identities=22%  Similarity=0.289  Sum_probs=56.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|.....|.+|+++|.++.+.
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP------------YKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS------------EECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcC------------eeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            8999999999999999999999999988876            99999999999999999999999988764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.5e-12  Score=107.03  Aligned_cols=57  Identities=16%  Similarity=0.306  Sum_probs=48.4

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh--------cCccccccCccccCCchhhHHH-HhhhccCcc
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK--------AKHFKCHVCHKKLSTAGGMAIH-VLQVHKENV   63 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R--------eKPfkC~~CgK~Fs~~s~L~rH-~r~hH~ekp   63 (374)
                      +.+|++| |.+|++.|.++..|++|++        +|+|+|.+|+|.|.+++.|.+| +++|.++++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp   79 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN   79 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC
Confidence            3477888 9999999999999998875        4689999999999999999999 788888877

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.7e-12  Score=92.84  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=36.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|.....|.+|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP------------YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC------------EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC------------cCCCCCcchhCCHHHHHHHHHHhc
Confidence            4567777777777777777777777666654            666777777777777777776665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.2e-12  Score=96.31  Aligned_cols=56  Identities=32%  Similarity=0.586  Sum_probs=51.7

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCc
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      ..+++.| |.+|++.|.+...|++|++    +++|+|.+|++.|.+...|.+|+++|+++.
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3467888 9999999999999999999    899999999999999999999999998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=2.4e-12  Score=92.02  Aligned_cols=52  Identities=27%  Similarity=0.552  Sum_probs=45.6

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +++.| |.+|++.|.+...|.+|++    +++|+|.+|++.|.+.+.|.+|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35667 9999999999999999999    8999999999999999999999999874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2e-12  Score=99.55  Aligned_cols=65  Identities=15%  Similarity=0.184  Sum_probs=56.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+|+|.+|++.|.+...|.+|++.||.++.        .++.|.|.+|++.|.....|.+|+++|+++....
T Consensus        13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A           13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--------VPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHTTCSSC--------CCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--------CCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            8999999999999999999999988887630        1123999999999999999999999999887653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.25  E-value=4.4e-12  Score=90.63  Aligned_cols=56  Identities=9%  Similarity=0.126  Sum_probs=43.0

Q ss_pred             ccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|...+.|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP------------YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC------------EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC------------ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888877777665            777788888888888888887776653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=4.2e-12  Score=101.87  Aligned_cols=56  Identities=20%  Similarity=0.393  Sum_probs=52.0

Q ss_pred             CCccc-cCcCCCccc-ChHHHHHHhh-----cCccccccCccccCCchhhHHHHhhhccCccc
Q 017258            9 SSKVW-CYYCDREFD-DEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs-~~s~Lk~H~R-----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~   64 (374)
                      +++.| |.+|++.|. +...|++|++     +|+|+|.+|+|.|.++..|.+|+++||++++.
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            56777 999999999 9999999988     68999999999999999999999999999863

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=2.5e-12  Score=98.00  Aligned_cols=56  Identities=23%  Similarity=0.446  Sum_probs=40.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC--ccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE--NVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e--kp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      +|+|+|.+|++.|.+...|.+|++.+|.+  ++            |.|.+|++.|.....|.+|++.+++
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~------------~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTENVAK------------FHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS------------EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc------------cCCCCCCCccCCHHHHHHHHHHhCC
Confidence            77788888888888888888887654443  33            7777788888888888888777554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=8.8e-12  Score=90.11  Aligned_cols=56  Identities=16%  Similarity=0.237  Sum_probs=44.1

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHH-hhhcCC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEE  101 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~-rth~ge  101 (374)
                      |+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|.....|.+|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            578888888888888888888888777765            77888888888888888886 556554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=98.67  Aligned_cols=52  Identities=23%  Similarity=0.551  Sum_probs=47.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      .++.+ |.+|+|.|.++.+|++|++    +|+|+|.+|+|+|.+++.|.+|++..|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            44566 9999999999999999999    9999999999999999999999866554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1e-11  Score=94.63  Aligned_cols=57  Identities=18%  Similarity=0.241  Sum_probs=43.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhcc---CccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhh-hcCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK---ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGE-EEEE  101 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~---ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rt-h~ge  101 (374)
                      +|+|+|.+|++.|.+...|.+|+++|++   +++            |.|.+|++.|.....|.+|++. |.++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~------------~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALR------------FPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC------------EECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc------------cCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            6788888888888888888888887775   443            7888888888888888888854 4443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=1.3e-11  Score=88.16  Aligned_cols=50  Identities=18%  Similarity=0.482  Sum_probs=47.5

Q ss_pred             ccCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      .|.+|++.|.+...|.+|++    +++|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             BCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            39999999999999999999    899999999999999999999999998875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.3e-11  Score=90.96  Aligned_cols=56  Identities=16%  Similarity=0.263  Sum_probs=44.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhc--cCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH--KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH--~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      +|+|+|.+|++.|.+...|.+|++.+|  ++++            |.|.+|++.|...+.|.+|++.|++
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~------------~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------------YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC------------EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC------------eECCCCCCccCCHHHHHHHHHHHcC
Confidence            778888888888888888888887744  4444            8888888888888888888887765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.3e-11  Score=90.97  Aligned_cols=52  Identities=25%  Similarity=0.590  Sum_probs=48.6

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh------cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R------eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +++.| |.+|++.|.+...|.+|++      +++|+|.+|++.|.+.+.|.+|++.||+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            67778 9999999999999999986      6899999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.8e-11  Score=93.27  Aligned_cols=54  Identities=26%  Similarity=0.438  Sum_probs=49.1

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh-------cCccccccCccccCCchhhHHHHhhhccCc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R-------eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      ++|+| |.+|++.|.+...|.+|++       +++|+|.+|++.|.+.+.|.+|++.+|.+.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            67888 9999999999999999988       479999999999999999999997777653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.6e-11  Score=92.31  Aligned_cols=54  Identities=20%  Similarity=0.566  Sum_probs=49.7

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh------cCccccccCccccCCchhhHHHHhhhccCc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R------eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      ++|+| |.+|++.|.+...|++|++      +++|+|.+|++.|.+...|.+|++++|+..
T Consensus        12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            67888 9999999999999999986      389999999999999999999999998754

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=1.4e-11  Score=92.56  Aligned_cols=55  Identities=15%  Similarity=0.256  Sum_probs=46.2

Q ss_pred             cCccccc--cCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhc
Q 017258           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        33 eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      +|+|+|.  .|++.|.+...|.+|+++|+++++            |.|.+|++.|...+.|.+|+++|.
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP------------FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC------------EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC------------eECCCCCchhCCHHHHHHHHHhcC
Confidence            7888886  588888888888888888887765            888888888888888888888763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.11  E-value=6.8e-11  Score=94.73  Aligned_cols=57  Identities=23%  Similarity=0.511  Sum_probs=52.4

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCcccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~   65 (374)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++++++.
T Consensus        42 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           42 DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            45667 9999999999999999999    899999999999999999999999999988743

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.11  E-value=8.9e-11  Score=95.97  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=66.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCC-------------------CCCCCcccccccCCCCCCHHHHHH
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA-------------------KPGRESTDIEIYGMQGIPPDVLAA   93 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~-------------------kpgr~~~~C~iCgK~F~~~s~L~~   93 (374)
                      +++|+|.+|++.|.+...|.+|++.|+++++|.|..|                   ..+++.|.|.+|++.|.....|.+
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence            6789999999999999999999999999999999865                   234567999999999999999999


Q ss_pred             HHhhhcCCCcccc
Q 017258           94 HYGEEEEEVPSKM  106 (374)
Q Consensus        94 H~rth~ge~~~k~  106 (374)
                      |+++|.++.+.+.
T Consensus        85 H~~~h~~~~~~~C   97 (124)
T 2dlq_A           85 HMVSHTGEMPYKC   97 (124)
T ss_dssp             HHHHHSSSCSEEC
T ss_pred             HHHHcCCCCCccC
Confidence            9999998876554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=5.4e-11  Score=85.90  Aligned_cols=50  Identities=22%  Similarity=0.602  Sum_probs=45.1

Q ss_pred             cc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccC
Q 017258           12 VW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        12 p~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +| |.+|++.|.+...|.+|++    +++|+|.+|++.|.+.+.|.+|++..|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            45 9999999999999999998    89999999999999999999997555543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=3e-11  Score=99.15  Aligned_cols=63  Identities=16%  Similarity=0.153  Sum_probs=55.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhc----cCccccCCCCCCCCCcccccccCCCCCCHHHHHHH-HhhhcCCCccccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH----KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH-YGEEEEEVPSKMA  107 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH----~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H-~rth~ge~~~k~~  107 (374)
                      ||+|+|.+|++.|.+++.|.+|++.+|    ++++            |.|++||+.|...+.|.+| +++|.++.+.+..
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp------------f~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS------------YVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC------------EEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC------------cCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            899999999999999999999998544    3443            9999999999999999999 8999999876543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=8.5e-11  Score=94.70  Aligned_cols=52  Identities=25%  Similarity=0.446  Sum_probs=46.4

Q ss_pred             CCccc-cCcCCCcc-cChHHHHHHhh---cCccccccCccccCCchhhHHH-Hhhhcc
Q 017258            9 SSKVW-CYYCDREF-DDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIH-VLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~F-s~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH-~r~hH~   60 (374)
                      +++.| |.+|++.| ....+|+.|++   +|+|+|.+|+|.|.++..|.+| +++|.+
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            35667 99999999 99999999998   8999999999999999999999 655543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.07  E-value=6.2e-11  Score=92.43  Aligned_cols=56  Identities=20%  Similarity=0.326  Sum_probs=52.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      ||+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|.....|.+|++.|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCCccCCHHHHHHHHHHhCC
Confidence            6899999999999999999999999988876            9999999999999999999999874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=1.3e-10  Score=91.31  Aligned_cols=67  Identities=13%  Similarity=-0.009  Sum_probs=44.1

Q ss_pred             ccccccCccccCCchhhHHHHhh-hccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~-hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      .|.|..|++.|.+...|.+|+++ |.++++..+-.++.    |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~----~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----EECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCC----TTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceec----cCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            45677777777777777777776 44443322222222    777777777777777777777777776654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.5e-11  Score=87.46  Aligned_cols=51  Identities=20%  Similarity=0.372  Sum_probs=32.1

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh---cCccccc-cCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK---AKHFKCH-VCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R---eKPfkC~-~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      ++|+| |.+|++.|. ...|++|++   +|+|+|. .|++.|.+++.|.+|+++|..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            34555 666666666 666666665   6666666 666666666666666655443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.05  E-value=1.1e-10  Score=90.38  Aligned_cols=54  Identities=24%  Similarity=0.538  Sum_probs=48.8

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +++.+ |.+|++.|.+...|.+|++    +++|+|.+|++.|.+.+.|.+|+++|++++
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            45667 9999999999999999998    899999999999999999999999998875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.05  E-value=1.3e-10  Score=91.26  Aligned_cols=62  Identities=19%  Similarity=0.231  Sum_probs=56.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|.++...+.
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   67 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP------------YKCKTCDYAAADSSSLNKHLRIHSDERPFKC   67 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS------------EECSSSCCEESSHHHHHHHHHHSCCCCCEEC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCC------------EeCCCCCCccCCHHHHHHHHHHhCCCCCccC
Confidence            7899999999999999999999999888775            9999999999999999999999988876544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=6.3e-10  Score=87.28  Aligned_cols=53  Identities=21%  Similarity=0.218  Sum_probs=49.0

Q ss_pred             cCcCCCcccChHHHHHHhh-----cCc--------cccccCccccCCchhhHHHHhhhccCccccC
Q 017258           14 CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R-----eKP--------fkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      |.+|++.|.....|.+|++     +++        |+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        28 C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            8999999999999999987     555        9999999999999999999999999998655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=1.8e-10  Score=86.32  Aligned_cols=52  Identities=25%  Similarity=0.627  Sum_probs=47.2

Q ss_pred             CCCccc-cC--cCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhc
Q 017258            8 VSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus         8 ~gEKp~-C~--~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      .+++.| |.  .|++.|.....|.+|++    +++|+|.+|++.|.+.+.|.+|+++|+
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            367777 97  59999999999999998    899999999999999999999998763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-11  Score=92.08  Aligned_cols=53  Identities=15%  Similarity=0.248  Sum_probs=48.0

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+++.| |.+|++.|.....|.+   +++|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        14 ~~~~~~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           14 LGDRSQKCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCCSEEECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             CCCCCeeCCcccchhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            367778 9999999999888876   8899999999999999999999999988887

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.02  E-value=1.1e-10  Score=97.07  Aligned_cols=54  Identities=24%  Similarity=0.419  Sum_probs=50.4

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh--cCccccccCccccCCchhhHHHHhhhccCc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R--eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      ++|+| |.+|++.|.+...|++|++  +++|+|.+|++.|.+.+.|.+|+++||+..
T Consensus        71 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           71 AISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            46777 9999999999999999999  899999999999999999999999999763

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.9e-11  Score=87.34  Aligned_cols=56  Identities=14%  Similarity=0.229  Sum_probs=51.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc-ccCCCCCCHHHHHHHHhhhcCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-IYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~-iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|+|+|.+|++.|. ...|.+|+++ +++++            |.|. .||+.|...+.|.+|+++|....
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p------------~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP------------VACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE------------EECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcC------------ccCCcccCcccccHHHHHHHHHhhcccC
Confidence            78999999999999 9999999988 77776            9999 99999999999999999987643

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.01  E-value=1.9e-10  Score=87.33  Aligned_cols=52  Identities=25%  Similarity=0.597  Sum_probs=47.7

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+.+.|.+|+++|++
T Consensus        26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           26 DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            45667 9999999999999999998    8999999999999999999999998864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.99  E-value=2.8e-10  Score=89.19  Aligned_cols=57  Identities=16%  Similarity=0.252  Sum_probs=53.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|.++
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKP------------YSCPVCGLRFKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCS------------EECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCC------------CcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            6899999999999999999999999888776            99999999999999999999999886

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=3.6e-10  Score=85.69  Aligned_cols=62  Identities=13%  Similarity=0.066  Sum_probs=55.0

Q ss_pred             cCcccccc--CccccCCchhhHHHHh-hhccCccccCCCCCCCCCcccccc--cCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r-~hH~ekp~~cp~~kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                      +++|.|..  |++.|.+...|.+|++ .|.++++            |.|.+  |++.|.....|.+|+++|.++.+.+.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C   71 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS------------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   71 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC------------EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC------------eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeC
Confidence            67899997  9999999999999998 5767665            88988  99999999999999999998876543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.96  E-value=2.6e-10  Score=85.36  Aligned_cols=54  Identities=15%  Similarity=0.142  Sum_probs=34.7

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccc--cCCCCCCHHHHHHHHhhh
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i--CgK~F~~~s~L~~H~rth   98 (374)
                      +++|+|.+  |++.|.+...|.+|+++|+++++            |+|.+  |++.|.....|.+|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP------------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS------------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC------------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            55666666  66666666666666666666554            66643  666666666666666554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=3.4e-10  Score=91.35  Aligned_cols=62  Identities=15%  Similarity=0.121  Sum_probs=56.3

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                      .+|+|+| .|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|.++...+.
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC   68 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTTCCCCCEEC
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcC------------ccCCCCCcccCCHHHHHHHHHHcCCCCCeeC
Confidence            3899999 999999999999999999988776            9999999999999999999999998876543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.94  E-value=5.6e-10  Score=83.56  Aligned_cols=51  Identities=18%  Similarity=0.454  Sum_probs=45.8

Q ss_pred             CCCccc-cCc--CCCcccChHHHHHHhh----cCcccccc--CccccCCchhhHHHHhhh
Q 017258            8 VSSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus         8 ~gEKp~-C~~--CgK~Fs~~s~Lk~H~R----eKPfkC~~--CgK~Fs~~s~L~rH~r~h   58 (374)
                      ..++.+ |.+  |++.|.+...|++|++    +|+|+|.+  |++.|.+.+.|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            355666 999  9999999999999998    89999975  999999999999999764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.94  E-value=6.1e-10  Score=89.72  Aligned_cols=56  Identities=18%  Similarity=0.410  Sum_probs=49.5

Q ss_pred             ccc-cCcCCCcccChHHHHHHhh---cCccccccCccccCCchhhHHHHh-hhccCccccC
Q 017258           11 KVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKV   66 (374)
Q Consensus        11 Kp~-C~~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r-~hH~ekp~~c   66 (374)
                      +.| |.+|++.|.....|.+|++   +++|+|.+|++.|.+...|.+|++ .|.++++|.|
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            456 9999999999999999998   899999999999999999999997 5656666444

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.94  E-value=5.3e-10  Score=95.51  Aligned_cols=55  Identities=25%  Similarity=0.393  Sum_probs=51.6

Q ss_pred             cCcCCCcccChHHHHHHhh----cCcccccc--CccccCCchhhHHHHhhhccCccccCCC
Q 017258           14 CYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~   68 (374)
                      |.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|+++|+++++|.|..
T Consensus        65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A           65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred             CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCC
Confidence            9999999999999999988    79999998  9999999999999999999999999974

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.4e-11  Score=96.87  Aligned_cols=72  Identities=14%  Similarity=0.113  Sum_probs=59.3

Q ss_pred             HHHHHHhh----cCccccccCccccCCchhhHHHHhh--hccCccccCCCCCCCCCcccccccCCCC--CCHHHHHHHHh
Q 017258           25 KILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQ--VHKENVTKVPNAKPGRESTDIEIYGMQG--IPPDVLAAHYG   96 (374)
Q Consensus        25 s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~--hH~ekp~~cp~~kpgr~~~~C~iCgK~F--~~~s~L~~H~r   96 (374)
                      +.|++|++    +|+|+|.+|++.|.+...|.+|++.  |++++.           .+.|.+|++.|  .....|.+|++
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~-----------~~~C~~C~~~f~f~~~~~l~~H~~   73 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN-----------HETDNNNPKRWSKPRKRSLLEMEG   73 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC-----------CCCCCCCCSCCSSCCCCCCCCCCC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCC-----------CccCCCCCcccccccHHHHHHHhh
Confidence            45666766    8999999999999999999999987  444432           15599999999  89999999999


Q ss_pred             hhcCCCccccc
Q 017258           97 EEEEEVPSKMA  107 (374)
Q Consensus        97 th~ge~~~k~~  107 (374)
                      +|.++.+.+..
T Consensus        74 ~H~~~~~~~C~   84 (115)
T 2dmi_A           74 KEDAQKVLKCM   84 (115)
T ss_dssp             SCCCCSSCBCS
T ss_pred             ccCCCcceECC
Confidence            99988776543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.84  E-value=2.3e-09  Score=84.53  Aligned_cols=52  Identities=31%  Similarity=0.669  Sum_probs=47.3

Q ss_pred             CCccc-cC--cCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhcc
Q 017258            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus         9 gEKp~-C~--~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +++.| |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++
T Consensus        42 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           42 GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            45667 96  59999999999999998    8999999999999999999999998864

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=1.8e-09  Score=76.89  Aligned_cols=43  Identities=16%  Similarity=0.274  Sum_probs=32.0

Q ss_pred             cCccccccCccccCCchhhHHHHh-hhccCccccCCCCCCCCCcccccccCCCCCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r-~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~   87 (374)
                      +|+|+|.+|++.|.+...|.+|++ +|+++++            |+|.+|++.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~------------~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP------------HKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC------------CCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC------------ccCCCCCCCCCC
Confidence            677888888888888888888876 5666655            777788877764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.79  E-value=2.8e-09  Score=81.22  Aligned_cols=54  Identities=13%  Similarity=0.188  Sum_probs=50.6

Q ss_pred             cccc--ccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccc--cCCCCCCHHHHHHHHhhhcC
Q 017258           35 HFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        35 PfkC--~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~g  100 (374)
                      +|+|  ..|++.|.+...|.+|+++|+++++            |+|.+  |++.|.....|.+|+++|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP------------YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC------------EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC------------eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  8999999999999999999998876            88988  99999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=2.8e-09  Score=73.85  Aligned_cols=39  Identities=18%  Similarity=0.194  Sum_probs=31.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK   83 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++            |.|++|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~------------~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP------------YSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC------------CCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCC------------ccCCCCCC
Confidence            6788888888888888888888888877766            77777775

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=8e-09  Score=73.52  Aligned_cols=42  Identities=26%  Similarity=0.446  Sum_probs=37.4

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh-----cCccccccCccccCCc
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTA   48 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R-----eKPfkC~~CgK~Fs~~   48 (374)
                      ..++++| |.+|++.|.+..+|.+|++     +|+|+|.+|++.|.+.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            3467788 9999999999999999975     8999999999999863

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.70  E-value=4.3e-09  Score=72.01  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=28.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999999888887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.2e-09  Score=71.93  Aligned_cols=31  Identities=26%  Similarity=0.370  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCC
Confidence            8899999999999999999999998888877

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.70  E-value=8.9e-09  Score=79.32  Aligned_cols=62  Identities=18%  Similarity=0.281  Sum_probs=55.3

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccCccccCCCCCCCCCccccc--ccCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~--iCgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                      .+.|.|.+  |++.|.....|.+|++.|+++++            |.|.  .|++.|.....|.+|++.|.++...+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP------------YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC   68 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC------------EECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC------------cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence            46899999  99999999999999999888776            8886  699999999999999999998876544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.69  E-value=4.6e-09  Score=71.73  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999998888887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4.7e-09  Score=71.82  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=29.6

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP   40 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            3338899999999999999999999999888877

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=9.7e-11  Score=87.05  Aligned_cols=62  Identities=16%  Similarity=0.139  Sum_probs=53.0

Q ss_pred             HHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           25 KILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        25 s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      ..|.+|++    +++|+|.+|++.|.+...|.+       +++            |.|.+|++.|.....|.+|+++|.+
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~------------~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT------------PMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSS------------CCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCC------------CCCCCCChhhcCHHHHHHHHHhhcC
Confidence            45666766    899999999999999999886       333            9999999999999999999999988


Q ss_pred             CCccc
Q 017258          101 EVPSK  105 (374)
Q Consensus       101 e~~~k  105 (374)
                      +.+.+
T Consensus        65 ~~~~~   69 (73)
T 2ctu_A           65 KKTSG   69 (73)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            76543

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.69  E-value=4e-09  Score=72.08  Aligned_cols=32  Identities=25%  Similarity=0.399  Sum_probs=28.9

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             CCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC
Confidence            38899999999999999999999999888887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.68  E-value=6.7e-09  Score=71.02  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=29.8

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            3338899999999999999999999999988887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.3e-09  Score=71.04  Aligned_cols=32  Identities=28%  Similarity=0.345  Sum_probs=28.5

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+...|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHhCCCCC
Confidence            38899999999999999999999998888877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.6e-09  Score=70.76  Aligned_cols=31  Identities=23%  Similarity=0.361  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT   40 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999998888877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5e-09  Score=71.44  Aligned_cols=31  Identities=26%  Similarity=0.353  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             CCCeECCCCCCccCchHHHHHHHHhcCCCCC
Confidence            8899999999999999999999988888887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.2e-09  Score=72.58  Aligned_cols=34  Identities=18%  Similarity=0.290  Sum_probs=29.4

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |..+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC
Confidence            3338899999999999999999999998888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.9e-09  Score=71.47  Aligned_cols=31  Identities=26%  Similarity=0.384  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888877

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.68  E-value=2.4e-09  Score=76.13  Aligned_cols=50  Identities=14%  Similarity=0.006  Sum_probs=31.7

Q ss_pred             ccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCc
Q 017258           42 HKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        42 gK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~  103 (374)
                      +|.|.+.+.|..|+++|.++++            |.|.+||+.|...+.|.+|+++|.++.+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP------------ATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC------------EECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             ccccCCCcchhhHHHhcCCCCC------------ccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            3556666666666666666554            6666666666666666666666666654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.4e-09  Score=71.85  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=28.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLISHQRTHAGEKP   40 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHHTTSCC
T ss_pred             CcCcCCCCCCcccCcHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999999888887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.5e-09  Score=71.64  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKP   40 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCS
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999998888887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.5e-09  Score=71.79  Aligned_cols=31  Identities=23%  Similarity=0.368  Sum_probs=28.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            8899999999999999999999999888877

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.1e-09  Score=72.00  Aligned_cols=32  Identities=31%  Similarity=0.474  Sum_probs=28.4

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999988888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6e-09  Score=71.02  Aligned_cols=31  Identities=26%  Similarity=0.387  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCCccCCccChhhCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999998888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.8e-09  Score=70.70  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=29.1

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |..+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC
Confidence            3338899999999999999999999988888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.2e-09  Score=71.94  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999998888887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.8e-09  Score=71.22  Aligned_cols=31  Identities=26%  Similarity=0.504  Sum_probs=28.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKP   40 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCcCCchhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999998888887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.4e-09  Score=70.93  Aligned_cols=32  Identities=19%  Similarity=0.300  Sum_probs=28.6

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999999888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.66  E-value=4.4e-09  Score=71.71  Aligned_cols=31  Identities=19%  Similarity=0.358  Sum_probs=27.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            8899999999999999999999988888877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5e-09  Score=71.57  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            8899999999999999999999998888877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.3e-09  Score=72.59  Aligned_cols=31  Identities=16%  Similarity=0.446  Sum_probs=27.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            8899999999999999999999988888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.4e-09  Score=70.35  Aligned_cols=31  Identities=26%  Similarity=0.477  Sum_probs=27.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP   38 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHHTSSCS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            7889999999999999999999988888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6e-09  Score=71.01  Aligned_cols=31  Identities=29%  Similarity=0.438  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999988888877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.1e-09  Score=71.40  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=28.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            8899999999999999999999998888877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=7e-09  Score=70.81  Aligned_cols=32  Identities=22%  Similarity=0.358  Sum_probs=28.4

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKP   40 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHGGGGTTCCC
T ss_pred             CCcCccCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            38899999999999999999999998888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.2e-09  Score=71.48  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=28.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             CcCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999998888877

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=9.6e-09  Score=69.91  Aligned_cols=41  Identities=20%  Similarity=0.277  Sum_probs=33.6

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccC
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCg   82 (374)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++            |.|.+||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG------------KSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC------------CCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC------------CCCcCCC
Confidence            3347899999999999999999999998888876            6666665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4.5e-09  Score=71.66  Aligned_cols=32  Identities=19%  Similarity=0.315  Sum_probs=28.6

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            38899999999999999999999998888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4.9e-09  Score=71.59  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999998888887

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.64  E-value=1e-08  Score=72.89  Aligned_cols=47  Identities=9%  Similarity=0.133  Sum_probs=41.2

Q ss_pred             CCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccc
Q 017258           18 DREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (374)
Q Consensus        18 gK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~   64 (374)
                      +|.|.+...|..|++    +++|+|.+|++.|.+.+.|.+|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            467777777777777    89999999999999999999999999988763

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.7e-09  Score=70.60  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=27.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A           10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            8899999999999999999999988888877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.2e-09  Score=70.94  Aligned_cols=31  Identities=19%  Similarity=0.314  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             CCCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            8899999999999999999999988888877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=6.1e-09  Score=71.01  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=27.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999988888877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=5.8e-09  Score=71.25  Aligned_cols=31  Identities=26%  Similarity=0.335  Sum_probs=28.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999999988887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.63  E-value=9.3e-09  Score=70.07  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            8899999999999999999999988888877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.3e-09  Score=71.06  Aligned_cols=33  Identities=18%  Similarity=0.358  Sum_probs=28.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~   65 (374)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            889999999999999999999998888887733

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=6.2e-09  Score=71.19  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=27.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKP   40 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHTTTSCSCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999988888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=5.2e-09  Score=71.45  Aligned_cols=31  Identities=26%  Similarity=0.443  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=9.4e-09  Score=70.15  Aligned_cols=31  Identities=19%  Similarity=0.475  Sum_probs=28.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            8899999999999999999999988888877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=9e-09  Score=70.25  Aligned_cols=31  Identities=29%  Similarity=0.357  Sum_probs=27.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            8889999999999999999999988888877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=9.5e-09  Score=70.14  Aligned_cols=31  Identities=19%  Similarity=0.250  Sum_probs=28.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHTCCCS
T ss_pred             CcCeECCCCCCeeCChHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.62  E-value=1.1e-08  Score=69.87  Aligned_cols=31  Identities=23%  Similarity=0.425  Sum_probs=27.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            7889999999999999999999988888877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.1e-08  Score=70.02  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=27.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em8_A           10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKL   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCeECcccCchhCCHHHHHHHHHHHcCCCC
Confidence            7889999999999999999999988888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=8.7e-09  Score=70.33  Aligned_cols=32  Identities=22%  Similarity=0.350  Sum_probs=28.1

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             SCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            38899999999999999999999988888877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1e-08  Score=69.98  Aligned_cols=31  Identities=23%  Similarity=0.373  Sum_probs=27.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHHHcCCCCC
Confidence            8889999999999999999999998888877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.3e-08  Score=69.53  Aligned_cols=31  Identities=13%  Similarity=0.193  Sum_probs=27.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A           10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             CCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999988888877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.3e-08  Score=69.48  Aligned_cols=33  Identities=27%  Similarity=0.382  Sum_probs=28.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~   65 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            889999999999999999999999888888733

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.7e-08  Score=68.96  Aligned_cols=31  Identities=19%  Similarity=0.279  Sum_probs=28.3

Q ss_pred             cCccccccCccccCCchhhHHHHh-hhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r-~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+.+.|.+|++ +|.++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A           10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             CCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            889999999999999999999998 8888877

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.2e-08  Score=68.37  Aligned_cols=31  Identities=23%  Similarity=0.446  Sum_probs=26.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            7888888888888888888888888888877

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.55  E-value=2.1e-08  Score=66.88  Aligned_cols=35  Identities=14%  Similarity=0.265  Sum_probs=30.0

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            37889999999999999999999988888887554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.7e-08  Score=67.93  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=31.1

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccCC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp   67 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            388999999999999999999999998888886553

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.5e-08  Score=67.98  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=28.3

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCcc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |..+|+|+|.+|++.|.+...|.+|+++|+++++
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC
Confidence            3337889999999999999999999888888876

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.3e-08  Score=68.09  Aligned_cols=34  Identities=21%  Similarity=0.352  Sum_probs=30.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=4.9e-08  Score=67.46  Aligned_cols=37  Identities=22%  Similarity=0.308  Sum_probs=33.7

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh----cCccccccCcc
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHK   43 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK   43 (374)
                      ..+++.| |.+|++.|.+...|++|++    +|+|+|.+|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3467778 9999999999999999999    89999999986

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.8e-08  Score=66.15  Aligned_cols=34  Identities=15%  Similarity=0.288  Sum_probs=29.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            7889999999999999999999988888887544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2e-08  Score=68.45  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            8899999999999999999999999888887554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.2e-08  Score=68.25  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=30.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999999888887554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=67.46  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=29.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            7889999999999999999999988888887544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.8e-08  Score=67.98  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=31.5

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      |..+|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            3338899999999999999999999999888887555

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3e-08  Score=67.59  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.1e-08  Score=68.47  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=30.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp   67 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            88999999999999999999999999888885553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.4e-08  Score=68.11  Aligned_cols=34  Identities=24%  Similarity=0.328  Sum_probs=29.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            8899999999999999999999998888887554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.2e-08  Score=67.58  Aligned_cols=34  Identities=21%  Similarity=0.370  Sum_probs=29.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            8899999999999999999999998888887555

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=2.7e-08  Score=67.93  Aligned_cols=35  Identities=17%  Similarity=0.312  Sum_probs=30.7

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            38899999999999999999999999988888555

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=1.7e-08  Score=68.97  Aligned_cols=34  Identities=21%  Similarity=0.438  Sum_probs=30.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999988887555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.1e-08  Score=66.82  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=28.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            7888898899999998889999888888877443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=68.02  Aligned_cols=34  Identities=26%  Similarity=0.441  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999998888887554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.9e-08  Score=67.63  Aligned_cols=35  Identities=17%  Similarity=0.390  Sum_probs=30.5

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            38899999999999999999999999988887554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.6e-08  Score=67.29  Aligned_cols=35  Identities=23%  Similarity=0.398  Sum_probs=31.0

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            38899999999999999999999999988888555

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=67.99  Aligned_cols=34  Identities=18%  Similarity=0.411  Sum_probs=30.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887555

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.2e-08  Score=68.26  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=30.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999988887544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.51  E-value=3e-08  Score=67.68  Aligned_cols=34  Identities=26%  Similarity=0.387  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.3e-08  Score=68.05  Aligned_cols=34  Identities=26%  Similarity=0.463  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999999888887554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.4e-08  Score=67.15  Aligned_cols=34  Identities=21%  Similarity=0.442  Sum_probs=29.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            7889999999999999999999988888887544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.3e-08  Score=68.10  Aligned_cols=34  Identities=24%  Similarity=0.454  Sum_probs=29.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.7e-08  Score=67.10  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999888887444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.5e-08  Score=67.90  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=29.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            8899999999999999999999998888887544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.9e-08  Score=66.92  Aligned_cols=34  Identities=15%  Similarity=0.269  Sum_probs=29.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999988888887544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.6e-08  Score=65.86  Aligned_cols=34  Identities=12%  Similarity=0.302  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            7888888888888888888888888888877443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.2e-08  Score=68.27  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=30.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp   67 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            88999999999999999999999999888886653

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.5e-08  Score=67.91  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=29.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999998888887444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.4e-08  Score=67.18  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            8899999999999999999999999988887544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=2.6e-08  Score=67.25  Aligned_cols=34  Identities=15%  Similarity=0.320  Sum_probs=29.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            8899999999999999999999988888887544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.8e-08  Score=66.68  Aligned_cols=34  Identities=24%  Similarity=0.466  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999999988887544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4e-08  Score=67.05  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=30.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999988887554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.48  E-value=3.8e-08  Score=65.53  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            7888888888888888888888888888877443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.5e-08  Score=65.85  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=28.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            7888888888888888888888888888877443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.46  E-value=1.8e-09  Score=79.51  Aligned_cols=42  Identities=14%  Similarity=0.178  Sum_probs=22.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHH
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPD   89 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s   89 (374)
                      +++|+|.+|++.|.+.+.|.   ++|.++++            |.|.+||+.|...+
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k~------------~~C~~C~k~f~~~~   53 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFDPMTGT------------FRCTFCHTEVEEDE   53 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTE------------EBCSSSCCBCEECT
T ss_pred             CCCccCCCCCchhccHHHhH---hhcCCCCC------------EECCCCCCccccCc
Confidence            55566666666665555554   34444443            55556666555443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=6.4e-08  Score=65.40  Aligned_cols=34  Identities=15%  Similarity=0.158  Sum_probs=29.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            7889999999999999999999988888887544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.2e-08  Score=67.34  Aligned_cols=34  Identities=18%  Similarity=0.359  Sum_probs=29.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999998888887555

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=8.8e-08  Score=65.43  Aligned_cols=34  Identities=18%  Similarity=0.217  Sum_probs=29.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            7899999999999999999999999888887444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.8e-08  Score=65.52  Aligned_cols=34  Identities=12%  Similarity=0.269  Sum_probs=29.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            7889999999999999999999988888887544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=5.9e-08  Score=65.68  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=27.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            7888888888888888888888888888776443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.44  E-value=9.9e-08  Score=64.33  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=29.7

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+.+.|.+|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            37889999999999999999999998888887444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=7.9e-08  Score=63.83  Aligned_cols=34  Identities=15%  Similarity=0.387  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            7888888888888888889899888888877443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=5.5e-08  Score=66.36  Aligned_cols=34  Identities=24%  Similarity=0.345  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhcc-CccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~-ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|++ +++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            8899999999999999999999998888 887444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=7.3e-08  Score=65.42  Aligned_cols=35  Identities=23%  Similarity=0.388  Sum_probs=30.1

Q ss_pred             hcCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        32 ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      .+|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            37899999999999999999999998888887555

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=5e-08  Score=65.83  Aligned_cols=34  Identities=15%  Similarity=0.291  Sum_probs=30.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999988887544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=1.7e-07  Score=63.57  Aligned_cols=34  Identities=15%  Similarity=0.260  Sum_probs=32.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccCc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCH   42 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~Cg   42 (374)
                      ++|+| |.+|++.|.++..|.+|++    +|+|.|.+||
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            67888 9999999999999999999    9999999996

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.6e-08  Score=77.69  Aligned_cols=48  Identities=21%  Similarity=0.356  Sum_probs=22.0

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhc
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      +|++ |.+|++.| ....|..|+.   +|+|.|..|++.|.+ ..|..|++++.
T Consensus        15 ~r~~~C~~C~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~   66 (75)
T 2d9k_A           15 LRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVLV-KDLKTHPEVCG   66 (75)
T ss_dssp             CCCEECSSSCCEE-CHHHHHHHHHHHHHCEEECSSSCCEEET-TGGGTHHHHBT
T ss_pred             CcccCCcccChHh-hHHHHHHHHhHcCCCceEcccCCCcCcH-HHHHHHHHHcc
Confidence            3444 54555444 2444444444   444455555444442 44444444433

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=3.6e-07  Score=62.21  Aligned_cols=35  Identities=20%  Similarity=0.277  Sum_probs=31.9

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      ..++++| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.37  E-value=1.2e-07  Score=62.28  Aligned_cols=33  Identities=12%  Similarity=0.451  Sum_probs=28.2

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCcccc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~   65 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++|.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            688999999999999999999998888887643

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=3e-07  Score=62.60  Aligned_cols=34  Identities=21%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            8 AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367878 9999999999999999999    899999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=3.4e-07  Score=62.31  Aligned_cols=34  Identities=24%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467888 9999999999999999998    899999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=3.4e-07  Score=62.19  Aligned_cols=35  Identities=23%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             CCCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         7 ~~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      ..+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=3.6e-07  Score=62.11  Aligned_cols=34  Identities=26%  Similarity=0.398  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            8 TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.4e-07  Score=62.19  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            8 TGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788 9999999999999999999    899999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=3.3e-07  Score=62.50  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|+| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            8 TGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.34  E-value=2.5e-07  Score=58.90  Aligned_cols=30  Identities=17%  Similarity=0.336  Sum_probs=26.5

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCcc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      |+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            688999999999999999999988888876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=3.8e-07  Score=61.98  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            8 TGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=4.1e-07  Score=61.80  Aligned_cols=34  Identities=29%  Similarity=0.458  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            8 MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            367888 9999999999999999998    899999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.6e-07  Score=62.06  Aligned_cols=34  Identities=21%  Similarity=0.280  Sum_probs=31.5

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            8 SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=1.8e-07  Score=63.92  Aligned_cols=31  Identities=19%  Similarity=0.298  Sum_probs=26.4

Q ss_pred             cCccccc--cCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.  .|++.|.+...|.+|+++|+++++
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   42 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP   42 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            7888887  788888888888888888888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.32  E-value=4e-07  Score=61.76  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=31.5

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            8 TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=4.1e-07  Score=61.68  Aligned_cols=34  Identities=21%  Similarity=0.452  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++++| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            8 TGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.8e-07  Score=70.72  Aligned_cols=65  Identities=14%  Similarity=0.064  Sum_probs=55.9

Q ss_pred             HHHHHHhh----cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           25 KILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        25 s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      .+|..|++    +|++.|.+|++.| ....|..|+ .|-++++            +.|..|++.|.. ..|..|+++|.+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~------------~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGART------------ELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCE------------EECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCc------------eEcccCCCcCcH-HHHHHHHHHccC
Confidence            34666766    8999999999999 489999999 8888887            888999999999 789999999988


Q ss_pred             CCcc
Q 017258          101 EVPS  104 (374)
Q Consensus       101 e~~~  104 (374)
                      +...
T Consensus        68 ~~~~   71 (75)
T 2d9k_A           68 EGSG   71 (75)
T ss_dssp             BSSS
T ss_pred             CcCC
Confidence            7654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.32  E-value=3.9e-07  Score=62.02  Aligned_cols=34  Identities=24%  Similarity=0.357  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            8 TGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=3.7e-07  Score=62.03  Aligned_cols=34  Identities=24%  Similarity=0.339  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            8 TGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=3.8e-07  Score=62.05  Aligned_cols=34  Identities=21%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            8 SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467888 9999999999999999999    899999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=3.9e-07  Score=61.89  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            8 TGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.32  E-value=4.4e-07  Score=61.77  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            8 AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.2e-07  Score=61.85  Aligned_cols=34  Identities=26%  Similarity=0.393  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|++|++    +|+|+|..|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            8 TGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.1e-07  Score=61.69  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            8 TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.31  E-value=4.4e-07  Score=61.74  Aligned_cols=34  Identities=26%  Similarity=0.456  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            8 TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778 9999999999999999998    899999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.5e-07  Score=61.47  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            8 TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778 9999999999999999998    899999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4.1e-07  Score=61.19  Aligned_cols=34  Identities=24%  Similarity=0.448  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|+| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788 9999999999999999998    899999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.3e-07  Score=61.67  Aligned_cols=34  Identities=24%  Similarity=0.293  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            8 TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.2e-07  Score=61.74  Aligned_cols=34  Identities=24%  Similarity=0.406  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            8 TGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.3e-07  Score=61.69  Aligned_cols=34  Identities=18%  Similarity=0.341  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++++| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            8 SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=3.9e-07  Score=61.78  Aligned_cols=34  Identities=24%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            8 TGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788 9999999999999999999    899999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.30  E-value=4.3e-07  Score=61.67  Aligned_cols=34  Identities=29%  Similarity=0.408  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|..|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            8 TGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3.7e-07  Score=62.00  Aligned_cols=34  Identities=21%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            8 TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=4.6e-07  Score=61.41  Aligned_cols=34  Identities=24%  Similarity=0.423  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            8 TGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=4.3e-07  Score=61.67  Aligned_cols=34  Identities=21%  Similarity=0.389  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            8 TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=4.4e-07  Score=61.64  Aligned_cols=34  Identities=26%  Similarity=0.493  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            8 TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=4.5e-07  Score=61.61  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778 9999999999999999998    899999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=4.6e-07  Score=61.65  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            8 SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             SCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.30  E-value=4.9e-07  Score=61.30  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            8 TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=1.1e-08  Score=81.31  Aligned_cols=52  Identities=13%  Similarity=0.219  Sum_probs=36.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++            |+|..|.+    ...|..|.++|.+
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp------------~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ------------KRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHH------------HHCCCCSC----CCCCCCCCCCCCC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC------------cccchhhh----HHHHHhhhccccc
Confidence            7888888888888888888888888877776            55544432    2344455555554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.3e-07  Score=61.24  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778 9999999999999999998    899999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.1e-07  Score=61.29  Aligned_cols=34  Identities=24%  Similarity=0.384  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|..|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            8 TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=4e-07  Score=61.85  Aligned_cols=34  Identities=26%  Similarity=0.457  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            8 SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.6e-07  Score=60.99  Aligned_cols=33  Identities=27%  Similarity=0.391  Sum_probs=30.8

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      +++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67778 9999999999999999998    899999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4.2e-07  Score=61.75  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .++|.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            8 TGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367888 9999999999999999999    899999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=5.3e-07  Score=61.34  Aligned_cols=34  Identities=32%  Similarity=0.355  Sum_probs=31.2

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778 9999999999999999998    899999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=5e-07  Score=61.24  Aligned_cols=34  Identities=26%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            8 TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=5.4e-07  Score=61.20  Aligned_cols=34  Identities=26%  Similarity=0.394  Sum_probs=31.2

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            8 TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.5e-07  Score=61.15  Aligned_cols=33  Identities=21%  Similarity=0.357  Sum_probs=30.9

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      +++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            67888 9999999999999999998    899999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=5.6e-07  Score=60.99  Aligned_cols=33  Identities=24%  Similarity=0.244  Sum_probs=31.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      +++.| |.+|++.|.+...|++|++    +|+|+|..|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67888 9999999999999999998    899999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=6.2e-07  Score=60.76  Aligned_cols=34  Identities=29%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788 9999999999999999999    899999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.27  E-value=1.6e-07  Score=68.82  Aligned_cols=47  Identities=17%  Similarity=0.432  Sum_probs=39.0

Q ss_pred             CCCccc-cCcCCCcccChHHHHH-HhhcCccccccCccccCCchhhHHH
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQ-HQKAKHFKCHVCHKKLSTAGGMAIH   54 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~-H~ReKPfkC~~CgK~Fs~~s~L~rH   54 (374)
                      .++++| |.+|++.|.....|.+ |..+++|+|.+|++.|.+.+++..+
T Consensus        10 ~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A           10 TNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             CCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCcccccc
Confidence            478888 9999999999988862 2228999999999999998877644

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.25  E-value=3.5e-07  Score=58.07  Aligned_cols=30  Identities=23%  Similarity=0.521  Sum_probs=24.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            678888888888888888888888877765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=7.1e-07  Score=60.58  Aligned_cols=34  Identities=29%  Similarity=0.435  Sum_probs=31.0

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            8 TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.4e-07  Score=61.63  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=31.3

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            8 TGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788 9999999999999999998    899999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=6.4e-07  Score=60.83  Aligned_cols=34  Identities=24%  Similarity=0.373  Sum_probs=31.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            8 SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888 9999999999999999998    899999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=8e-07  Score=60.41  Aligned_cols=34  Identities=21%  Similarity=0.326  Sum_probs=30.9

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            8 SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367878 9999999999999999998    899999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=4e-07  Score=58.74  Aligned_cols=30  Identities=27%  Similarity=0.528  Sum_probs=24.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            678888888888888888888888777765

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=7.6e-07  Score=67.32  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=25.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|+|+|.+++.|++|+++|++++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            788888888888888888888888887765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.22  E-value=1.2e-07  Score=60.00  Aligned_cols=31  Identities=16%  Similarity=0.367  Sum_probs=27.9

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCccc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~   64 (374)
                      |+|+|.+|++.|.+.+.|.+|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            6899999999999999999999998888763

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=1.1e-06  Score=59.76  Aligned_cols=34  Identities=21%  Similarity=0.376  Sum_probs=30.9

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh-----cCccccccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R-----eKPfkC~~C   41 (374)
                      .+++.| |.+|++.|.+...|++|++     +|+|+|.+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            8 TGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            367888 9999999999999999987     899999988

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.22  E-value=5.1e-07  Score=57.50  Aligned_cols=30  Identities=20%  Similarity=0.400  Sum_probs=24.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            678888888888888888888888877664

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=5.1e-07  Score=54.75  Aligned_cols=30  Identities=17%  Similarity=0.423  Sum_probs=24.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|..|++.|.+...|.+|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            578889889999998888888988877653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.19  E-value=5.8e-07  Score=57.95  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=15.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +|+|+|.+|++.|.+...|.+|+++|++
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            5555555555555555555555555443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.18  E-value=7.3e-07  Score=68.54  Aligned_cols=34  Identities=9%  Similarity=0.269  Sum_probs=30.7

Q ss_pred             cCcccccc--CccccCCchhhHHHH-hhhccCccccC
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHV-LQVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~-r~hH~ekp~~c   66 (374)
                      ||||+|.+  |+|+|.+.++|.+|+ ++|.++|++-|
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            99999976  999999999999997 57889998666

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.18  E-value=1.4e-06  Score=58.49  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=29.3

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh----cCcccccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~   40 (374)
                      +++.| |.+|++.|.+...|.+|++    +|+|+|.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            67778 9999999999999999998    89999964

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=6.3e-07  Score=60.32  Aligned_cols=29  Identities=14%  Similarity=0.187  Sum_probs=24.0

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||+|.+  |+|+|.+++.|.+|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            78888876  888888888888888888765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=6.9e-07  Score=59.84  Aligned_cols=40  Identities=10%  Similarity=-0.165  Sum_probs=34.8

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |.|++|++.|...+.|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2en7_A            2 SSGSSGTGMKP------------YVCNECGKAFRSKSYLIIHTRTHTGESGP   41 (44)
T ss_dssp             CSCCCSSSSSS------------SCCTTTCCCCSSHHHHHHHHTTTCCSSSS
T ss_pred             CCCcCCCCCcC------------eECCCCCCccCCHHHHHHHhhhcCCCCCC
Confidence            57777777765            99999999999999999999999988654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.16  E-value=8.2e-07  Score=53.74  Aligned_cols=29  Identities=21%  Similarity=0.564  Sum_probs=24.0

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|+|..|++.|.+.+.|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57888889999998888988988877653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.16  E-value=9.7e-07  Score=53.27  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=22.5

Q ss_pred             CccccccCccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |+|+|.+|++.|.+...|.+|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5788888888888888888888777665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=5.4e-07  Score=59.76  Aligned_cols=40  Identities=15%  Similarity=-0.044  Sum_probs=34.4

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.
T Consensus         1 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            1 GSSGSSGGEKP------------YRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCCSCCS------------BCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CCccccCCCCC------------eeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            46777777765            99999999999999999999999987654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=9.7e-07  Score=56.40  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=23.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +++|+|.+|++.|.+...|.+|+++|++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            677888888888888888888887776653

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=9.7e-07  Score=58.49  Aligned_cols=39  Identities=8%  Similarity=-0.167  Sum_probs=33.2

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      |+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            1 GSSGSSGEKP------------YSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             CCSSSCSCCS------------CBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CCcCcCCCCC------------eECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            5566666665            99999999999999999999999987654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=8.6e-07  Score=60.17  Aligned_cols=41  Identities=17%  Similarity=-0.031  Sum_probs=35.3

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKP------------YQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCS------------SSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            57777777766            999999999999999999999999887653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.14  E-value=1.2e-06  Score=52.97  Aligned_cols=29  Identities=17%  Similarity=0.559  Sum_probs=24.6

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57889999999999999999988888764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=9.2e-07  Score=59.89  Aligned_cols=41  Identities=20%  Similarity=0.017  Sum_probs=35.3

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKP------------YECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCS------------SCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCC------------cCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57777777765            999999999999999999999999887653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=8e-07  Score=60.32  Aligned_cols=41  Identities=20%  Similarity=0.026  Sum_probs=35.1

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCS------------CBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=9.1e-07  Score=60.15  Aligned_cols=41  Identities=20%  Similarity=0.026  Sum_probs=35.4

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKP------------FQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSS------------BCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcC------------CCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            57777777765            999999999999999999999999887654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=6.5e-07  Score=71.02  Aligned_cols=50  Identities=10%  Similarity=0.181  Sum_probs=41.8

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhhccC
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|..|    .+...|..|.+.|.+.
T Consensus        21 ~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           21 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCS
T ss_pred             CCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccccc
Confidence            367888 9999999999999999998    899999765    4567777888777654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.1e-06  Score=59.70  Aligned_cols=41  Identities=12%  Similarity=-0.125  Sum_probs=34.9

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcccc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k~  106 (374)
                      |+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+.
T Consensus         3 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKP------------YECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCS------------CCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCC------------cCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6667777765            9999999999999999999999998876543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.1e-07  Score=55.99  Aligned_cols=29  Identities=24%  Similarity=0.520  Sum_probs=25.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +|+|+|..|++.|.+...|.+|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            57899999999999999999999888765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=8.7e-07  Score=60.12  Aligned_cols=41  Identities=22%  Similarity=0.045  Sum_probs=35.0

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCT------------TCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.13  E-value=1.4e-06  Score=54.28  Aligned_cols=30  Identities=13%  Similarity=0.360  Sum_probs=25.6

Q ss_pred             cCccccc--cCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.  .|++.|.+.+.|.+|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5789998  79999999999999998887653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.2e-06  Score=52.62  Aligned_cols=29  Identities=28%  Similarity=0.544  Sum_probs=23.9

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|+|..|++.|.+...|.+|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57888888888888888888888877653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=8.2e-07  Score=56.97  Aligned_cols=29  Identities=21%  Similarity=0.493  Sum_probs=22.7

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            67788888888888888888888777654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=9e-07  Score=56.54  Aligned_cols=29  Identities=21%  Similarity=0.465  Sum_probs=23.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            67888888888888888888888777665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=9.1e-07  Score=56.73  Aligned_cols=30  Identities=23%  Similarity=0.451  Sum_probs=24.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|++.|.+...|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            678888888888888888888888877653

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=7.5e-07  Score=60.09  Aligned_cols=40  Identities=13%  Similarity=-0.083  Sum_probs=34.7

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |+|++|++.|...+.|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            2 SSGSSGSGEKP------------YECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCCS------------EECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCCcccCCCcC------------eECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            46777777765            99999999999999999999999987654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.12  E-value=9.2e-07  Score=58.72  Aligned_cols=40  Identities=18%  Similarity=0.018  Sum_probs=33.7

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      |+++|.++++            |+|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENP------------YECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCS------------EECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCC------------ccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5566666665            999999999999999999999999886643

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=9.8e-07  Score=59.87  Aligned_cols=41  Identities=17%  Similarity=-0.043  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKP------------YKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCC------------CCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCC------------eECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1e-06  Score=59.87  Aligned_cols=41  Identities=17%  Similarity=0.074  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKC------------YKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCC------------CBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47777777765            999999999999999999999999887654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=6.1e-07  Score=61.04  Aligned_cols=41  Identities=15%  Similarity=0.014  Sum_probs=35.6

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKP------------YSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCS------------EEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCC------------eECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            57777777766            999999999999999999999999887654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=8e-07  Score=60.42  Aligned_cols=41  Identities=15%  Similarity=-0.111  Sum_probs=35.6

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKP------------YKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCC------------EECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCC------------EECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            57777777765            999999999999999999999999887654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1e-06  Score=56.52  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=22.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +|+|+|.+|++.|.+...|.+|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            67788888888888888888888777654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.1e-06  Score=59.68  Aligned_cols=41  Identities=20%  Similarity=-0.076  Sum_probs=34.9

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      .|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENP------------FICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCS------------CBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46777777765            999999999999999999999999887653

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=8.5e-07  Score=59.38  Aligned_cols=40  Identities=10%  Similarity=-0.140  Sum_probs=34.7

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A            2 SSGSSGTGEKP------------YECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             CCSSCCSCCCS------------EECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CCccCCCCCCC------------eECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            57777777765            99999999999999999999999988654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.10  E-value=8.3e-07  Score=60.35  Aligned_cols=41  Identities=20%  Similarity=0.001  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKP------------FECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCS------------EECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCC------------EECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.10  E-value=1.5e-06  Score=55.94  Aligned_cols=36  Identities=11%  Similarity=-0.187  Sum_probs=31.3

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |+++|.++++            |+|.+|++.|.....|.+|+++|.++
T Consensus         2 H~~~h~~~k~------------~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCC------------ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            6677777765            99999999999999999999999764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=9.3e-07  Score=53.26  Aligned_cols=27  Identities=26%  Similarity=0.488  Sum_probs=22.0

Q ss_pred             cCccccccCccccCCchhhHHHHhhhc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      ||+|+|.+|++.|.+...|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            578888888888888888888887664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=8.1e-07  Score=60.17  Aligned_cols=41  Identities=20%  Similarity=0.026  Sum_probs=35.3

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKP------------YKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCC------------EECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCC------------eeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=8e-07  Score=60.41  Aligned_cols=41  Identities=17%  Similarity=-0.014  Sum_probs=35.3

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |+|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERH------------YECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCC------------EECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCC------------eECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47777777765            999999999999999999999999887654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=2.3e-06  Score=58.19  Aligned_cols=33  Identities=18%  Similarity=0.279  Sum_probs=29.8

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCcccccc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~   40 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|.+
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            8 HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467788 9999999999999999998    89999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=1.3e-06  Score=59.38  Aligned_cols=41  Identities=12%  Similarity=-0.053  Sum_probs=35.0

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKL------------FKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCC------------CBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46677777765            999999999999999999999999887653

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=7.5e-07  Score=59.88  Aligned_cols=40  Identities=10%  Similarity=-0.122  Sum_probs=34.8

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            2 SSGSSGAGENP------------FKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CCSCCCSCCCS------------EECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CCccccCCCCC------------eECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            57777777766            99999999999999999999999987654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=8.8e-07  Score=59.99  Aligned_cols=41  Identities=15%  Similarity=-0.071  Sum_probs=35.1

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKP------------FECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCS------------EECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCC------------cCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=8.9e-07  Score=60.07  Aligned_cols=41  Identities=17%  Similarity=0.031  Sum_probs=35.3

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKP------------YECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCS------------EECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57777777765            999999999999999999999999887653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=9e-07  Score=59.95  Aligned_cols=41  Identities=20%  Similarity=-0.020  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKP------------YICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCS------------EECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcC------------EECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            47777777765            999999999999999999999999887653

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.3e-06  Score=58.13  Aligned_cols=39  Identities=21%  Similarity=0.068  Sum_probs=33.2

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      |+++|.++++            |+|++|++.|...+.|.+|+++|.++.+.
T Consensus         2 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGGEKP------------YPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CCSCCSSSCC------------BCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCcccCCCCC------------EECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            5566666665            99999999999999999999999987654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=9.1e-07  Score=59.93  Aligned_cols=41  Identities=17%  Similarity=-0.044  Sum_probs=35.1

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKP------------YRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCC------------EECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.2e-06  Score=56.52  Aligned_cols=30  Identities=13%  Similarity=0.318  Sum_probs=23.8

Q ss_pred             cCccccccCccccCCc-hhhHHHHhhhccCc
Q 017258           33 AKHFKCHVCHKKLSTA-GGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~-s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+|++.|.+. +.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            6788888888888888 88888887777653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=1.1e-06  Score=57.10  Aligned_cols=31  Identities=19%  Similarity=0.388  Sum_probs=27.0

Q ss_pred             cCccccc--cCccccCCchhhHHHHhhhccCcc
Q 017258           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        33 eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      +|+|+|.  .|++.|.+.+.|.+|+++|+++++
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            7889999  599999999999999988888775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.7e-06  Score=56.19  Aligned_cols=31  Identities=19%  Similarity=0.477  Sum_probs=28.4

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCcccc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC   38 (374)
                      .+++.| |.+|++.|.+...|++|++    +|+|+|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            367888 9999999999999999998    899988

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=1.2e-06  Score=52.67  Aligned_cols=29  Identities=28%  Similarity=0.540  Sum_probs=23.0

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|+|.+|++.|.+...|.+|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57888888888888888888888777653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.6e-06  Score=57.98  Aligned_cols=34  Identities=21%  Similarity=0.330  Sum_probs=31.1

Q ss_pred             CCCccc-cC--cCCCcccChHHHHHHhh----cCccccccC
Q 017258            8 VSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVC   41 (374)
Q Consensus         8 ~gEKp~-C~--~CgK~Fs~~s~Lk~H~R----eKPfkC~~C   41 (374)
                      .+++.| |.  +|++.|.++..|.+|++    +|+|+|.+|
T Consensus         8 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888 98  89999999999999999    899999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.2e-06  Score=59.57  Aligned_cols=41  Identities=15%  Similarity=-0.030  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      .|+++|.++++            |+|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRP------------YECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSS------------EECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcC------------cCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            36777777765            999999999999999999999999887654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=1.3e-06  Score=59.25  Aligned_cols=41  Identities=20%  Similarity=0.050  Sum_probs=34.9

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      .|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERH------------YECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCC------------EECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCC------------CCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            46777777765            999999999999999999999999887653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=9.2e-07  Score=53.32  Aligned_cols=26  Identities=19%  Similarity=0.479  Sum_probs=21.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhh
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      +|+|+|.+|++.|.+.+.|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            57888888888888888888888765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.33  E-value=5.2e-07  Score=54.88  Aligned_cols=28  Identities=32%  Similarity=0.534  Sum_probs=23.3

Q ss_pred             CccccccCccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |+|+|..|++.|.+.+.|.+|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5788888888888888888888877765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.06  E-value=9.3e-07  Score=61.33  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=23.1

Q ss_pred             HhhcCccccccCccccCCchhhHHHHh-hhccCc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVL-QVHKEN   62 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r-~hH~ek   62 (374)
                      |..+|+|+|.+|+|.|.+..+|.+|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            334678888888888888888888887 666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.2e-06  Score=52.43  Aligned_cols=26  Identities=23%  Similarity=0.508  Sum_probs=20.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhh
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      ||+|+|..|++.|.+.+.|.+|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            57788888888888888888887665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=1.1e-06  Score=59.66  Aligned_cols=41  Identities=17%  Similarity=-0.079  Sum_probs=35.0

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |+|++|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERP------------FKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCS------------CCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46777777765            999999999999999999999999887653

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=1.1e-06  Score=59.08  Aligned_cols=41  Identities=7%  Similarity=-0.133  Sum_probs=35.1

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKR------------YECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSS------------EECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            57777777765            999999999999999999999999887643

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=1.3e-06  Score=58.64  Aligned_cols=40  Identities=15%  Similarity=-0.054  Sum_probs=34.4

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      .|+++|.++++            |+|++|++.|...+.|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eoj_A            2 SSGSSGTGENP------------YECCECGKVFSRKDQLVSHQKTHSGQSGP   41 (44)
T ss_dssp             CSCCSSSSCCS------------CEETTTTEECSSHHHHHHHHTTSSSSCSC
T ss_pred             CCccccCCCcC------------eeCCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            36777777765            99999999999999999999999987654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=7.4e-07  Score=60.49  Aligned_cols=41  Identities=20%  Similarity=-0.008  Sum_probs=35.5

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKP------------FQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCS------------EECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCC------------eeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            57777777776            999999999999999999999999887654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.1e-06  Score=59.44  Aligned_cols=41  Identities=15%  Similarity=-0.008  Sum_probs=35.2

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKP------------YECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCS------------SEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCC------------eECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            57777777765            999999999999999999999999887653

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.1e-06  Score=58.25  Aligned_cols=39  Identities=21%  Similarity=0.041  Sum_probs=33.4

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      |+++|.++++            |.|++|++.|...+.|.+|+++|.++.+.
T Consensus         2 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKP------------YKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCS------------EECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCCCCC------------EeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            5666766665            99999999999999999999999988654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.2e-06  Score=59.28  Aligned_cols=41  Identities=22%  Similarity=0.050  Sum_probs=35.0

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      .|+++|.++++            |.|.+|++.|...+.|.+|+++|.++.+.+
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKP------------YNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCS------------EECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcC------------ccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            46777777765            999999999999999999999999887653

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.03  E-value=1.6e-06  Score=57.37  Aligned_cols=39  Identities=18%  Similarity=-0.028  Sum_probs=32.9

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      |+++|.++++            |+|.+|++.|...+.|.+|+++|.++.+.
T Consensus         2 H~~~H~~~~~------------~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            2 SSGSSGGETP------------YLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CCSCCCSSCC------------EECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CCccCCCCCC------------eECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            5556666665            99999999999999999999999987654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=1.9e-06  Score=58.63  Aligned_cols=40  Identities=18%  Similarity=0.045  Sum_probs=33.9

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      |+++|.++++            |.|.+|++.|.....|.+|+++|.++.+.+
T Consensus         3 h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTGEKP------------YKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSSCCS------------CBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCcc------------cCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            5666766665            999999999999999999999999887653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.02  E-value=2.3e-06  Score=52.90  Aligned_cols=29  Identities=21%  Similarity=0.464  Sum_probs=23.2

Q ss_pred             Cccccc--cCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~--~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|+|.  .|++.|.+.+.|.+|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578887  78888888888888888777653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3.5e-06  Score=56.89  Aligned_cols=33  Identities=27%  Similarity=0.443  Sum_probs=29.7

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh----cCcccccc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~   40 (374)
                      .+++.| |.+|+|.|.+..+|++|++    +|+|+|.+
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            367888 9999999999999999998    89999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.6e-06  Score=57.27  Aligned_cols=40  Identities=10%  Similarity=-0.022  Sum_probs=33.7

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      |+++|.++++            |.|++|++.|.....|.+|+++|.++.+.+
T Consensus         3 h~~~h~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTT------------SECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCC------------CCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcC------------eECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            5566666665            999999999999999999999999887653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=2.1e-06  Score=58.33  Aligned_cols=40  Identities=15%  Similarity=0.008  Sum_probs=33.7

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      |+++|.++++            |+|.+|++.|.....|.+|+++|.++.+.+
T Consensus         3 h~~~h~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTGEKP------------YECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSS------------CBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCCCCC------------cCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5566666665            999999999999999999999999887654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.97  E-value=3e-06  Score=50.35  Aligned_cols=26  Identities=15%  Similarity=0.478  Sum_probs=19.0

Q ss_pred             ccccccCccccCCchhhHHHHhhhcc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      +|+|.+|++.|.+.+.|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            47777888888887788888776654

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.1e-06  Score=59.14  Aligned_cols=40  Identities=8%  Similarity=-0.164  Sum_probs=34.6

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      +|+++|.++++            |.|++|++.|.....|.+|+++|.++.+.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A            2 SSGSSGTDSKS------------YNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCCCCCCCCCC------------EEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CCCcCCCCCCC------------eECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            47777777765            99999999999999999999999987654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=3.1e-06  Score=51.46  Aligned_cols=28  Identities=14%  Similarity=0.360  Sum_probs=22.8

Q ss_pred             CccccccCccccCCchhhHHH-HhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH-~r~hH~e   61 (374)
                      |+|+|..|++.|.+.+.|.+| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            578899999999999999999 6666654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=2.4e-06  Score=58.03  Aligned_cols=40  Identities=10%  Similarity=-0.137  Sum_probs=34.0

Q ss_pred             HHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC-CCcc
Q 017258           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE-EVPS  104 (374)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g-e~~~  104 (374)
                      .|+++|.++++            |.|.+|++.|.....|.+|+++|.+ +.+.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoy_A            2 SSGSSGQKEKC------------FKCNKCEKTFSCSKYLTQHERIHTRGVKSG   42 (46)
T ss_dssp             CCCCCCCCSCC------------EECSSSCCEESSSHHHHHHHTTCCSCCTTS
T ss_pred             CCccccCCCCC------------EECcCCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            36677777765            9999999999999999999999988 7654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.92  E-value=3.4e-06  Score=54.71  Aligned_cols=30  Identities=23%  Similarity=0.433  Sum_probs=23.8

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccCc
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|+|+|.+  |++.|.+.+.|.+|+++|++++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67888874  8888888888888888777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=4.4e-06  Score=53.68  Aligned_cols=27  Identities=11%  Similarity=0.080  Sum_probs=25.5

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      |.|.+|++.|...+.|.+|+++|.++.
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            999999999999999999999998865

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.87  E-value=5.8e-06  Score=55.00  Aligned_cols=23  Identities=26%  Similarity=0.535  Sum_probs=11.9

Q ss_pred             CCccc-cCcCCCcccChHHHHHHh
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQ   31 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~   31 (374)
                      +||+| |.+|+|+|.++++|++|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            44444 555555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.9e-06  Score=51.16  Aligned_cols=25  Identities=24%  Similarity=0.553  Sum_probs=19.8

Q ss_pred             CccccccCccccCCchhhHHHHhhh
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      |+|+|..|++.|.+.+.|.+|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5788888888888888888887665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=3.7e-06  Score=54.53  Aligned_cols=28  Identities=18%  Similarity=0.379  Sum_probs=20.2

Q ss_pred             cCccccccCccccCCchhhHHH-Hhhhcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIH-VLQVHK   60 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH-~r~hH~   60 (374)
                      +|+|+|..|++.|.+++.|.+| ++.|.+
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            6777777777777777777777 655544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.81  E-value=9.1e-06  Score=51.23  Aligned_cols=29  Identities=10%  Similarity=-0.046  Sum_probs=26.2

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +.|.|.+|++.|...+.|.+|++.|.++.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34999999999999999999999998764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.79  E-value=1.1e-05  Score=51.06  Aligned_cols=29  Identities=10%  Similarity=-0.093  Sum_probs=26.2

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +.|.|.+|++.|...+.|.+|+++|.++.
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.79  E-value=6.2e-06  Score=54.86  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=22.0

Q ss_pred             cCccccccCccccCCchhhHHHH
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~   55 (374)
                      ||+|+|..|+|+|.++++|.+|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            89999999999999999999998

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.76  E-value=1.8e-05  Score=50.04  Aligned_cols=30  Identities=13%  Similarity=-0.089  Sum_probs=27.5

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      .|+|++||+.|...+.|..|+++|.++.+.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            389999999999999999999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.74  E-value=1.6e-05  Score=51.90  Aligned_cols=32  Identities=9%  Similarity=0.029  Sum_probs=28.6

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCCCccc
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~k  105 (374)
                      +.|.|++||+.|...+.|.+|+++|.++.+..
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            34999999999999999999999999987654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.69  E-value=1.5e-05  Score=50.79  Aligned_cols=27  Identities=11%  Similarity=-0.160  Sum_probs=25.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|+|.+|++.|...+.|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            499999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.68  E-value=1.1e-05  Score=55.30  Aligned_cols=29  Identities=21%  Similarity=0.425  Sum_probs=22.2

Q ss_pred             cCccccc--cCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~--~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      +|+|+|.  .|++.|.+.+.|.+|+++|+++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            7778885  5888888888888888777665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=1.4e-05  Score=51.26  Aligned_cols=27  Identities=11%  Similarity=-0.030  Sum_probs=24.9

Q ss_pred             cccccccCCCCCCH-HHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPP-DVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~-s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|... +.|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            39999999999999 9999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.66  E-value=2e-05  Score=50.29  Aligned_cols=28  Identities=14%  Similarity=0.138  Sum_probs=25.4

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +.|+|.+|++.|.....|.+|+++|.++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3499999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.66  E-value=2.9e-05  Score=49.23  Aligned_cols=28  Identities=11%  Similarity=0.070  Sum_probs=25.7

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +.|.|.+|++.|.....|.+|+++|.++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4499999999999999999999999876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=2.4e-05  Score=49.68  Aligned_cols=28  Identities=11%  Similarity=0.041  Sum_probs=25.5

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +.|+|.+|++.|.....|.+|+++|.++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3499999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.62  E-value=1.6e-05  Score=51.45  Aligned_cols=26  Identities=12%  Similarity=0.054  Sum_probs=24.1

Q ss_pred             ccccccCCCCCCHHHHHHH-HhhhcCC
Q 017258           76 TDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H-~rth~ge  101 (374)
                      |+|++|++.|...+.|.+| ++.|.++
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A           10 YYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             EECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHccCc
Confidence            9999999999999999999 8888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.60  E-value=1.9e-05  Score=47.29  Aligned_cols=26  Identities=15%  Similarity=0.341  Sum_probs=19.6

Q ss_pred             Cccccc--cCccccCCchhhHHHHhhhc
Q 017258           34 KHFKCH--VCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        34 KPfkC~--~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |+|+|.  .|++.|.+.+.|.+|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            467787  78888888888888877664

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.60  E-value=2.1e-05  Score=54.28  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=24.6

Q ss_pred             cccccccCCCCCCHHHHHHHHh-hhcCCCcc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYG-EEEEEVPS  104 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~r-th~ge~~~  104 (374)
                      .|.|.+|+|.|.....|.+|++ +|.++...
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3999999999999999999999 89887654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.58  E-value=4.6e-05  Score=45.54  Aligned_cols=27  Identities=22%  Similarity=0.170  Sum_probs=25.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            389999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.52  E-value=4.3e-05  Score=51.19  Aligned_cols=29  Identities=10%  Similarity=-0.135  Sum_probs=25.6

Q ss_pred             CCcccccc--cCCCCCCHHHHHHHHhhhcCC
Q 017258           73 RESTDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        73 r~~~~C~i--CgK~F~~~s~L~~H~rth~ge  101 (374)
                      +++|+|..  |+|.|...+.|.+|+++|.++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34499976  999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.51  E-value=4.1e-05  Score=45.90  Aligned_cols=27  Identities=15%  Similarity=-0.017  Sum_probs=25.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            389999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=5.1e-05  Score=45.52  Aligned_cols=27  Identities=11%  Similarity=0.140  Sum_probs=25.1

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|.....|..|+++|.++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            499999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.50  E-value=5.1e-05  Score=48.26  Aligned_cols=28  Identities=18%  Similarity=-0.033  Sum_probs=25.6

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +.|.|.+|++.|.....|.+|+++|.++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            3499999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.50  E-value=6.5e-05  Score=45.03  Aligned_cols=28  Identities=7%  Similarity=0.112  Sum_probs=25.5

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      .|+|.+|++.|...+.|.+|+++|+++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            3899999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.50  E-value=5.7e-05  Score=44.55  Aligned_cols=26  Identities=8%  Similarity=0.041  Sum_probs=23.7

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |+|.+|++.|...+.|.+|+++|.++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            88999999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=6.5e-05  Score=44.67  Aligned_cols=27  Identities=11%  Similarity=-0.086  Sum_probs=25.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            389999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.45  E-value=2.2e-05  Score=53.83  Aligned_cols=38  Identities=5%  Similarity=-0.135  Sum_probs=31.5

Q ss_pred             HHHHhhhccCccccCCCCCCCCCccccc--ccCCCCCCHHHHHHHHhhhcCC
Q 017258           52 AIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        52 ~rH~r~hH~ekp~~cp~~kpgr~~~~C~--iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      ..|...|.++++            |+|.  .|++.|...+.|.+|+++|.++
T Consensus         7 ~~~~~~H~~~k~------------~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCC------------eECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344456777776            8885  7999999999999999999876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=6.2e-05  Score=44.86  Aligned_cols=27  Identities=19%  Similarity=0.063  Sum_probs=25.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            389999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.43  E-value=5.9e-05  Score=44.98  Aligned_cols=26  Identities=12%  Similarity=0.133  Sum_probs=23.8

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      .|+|.+|++.|...+.|.+|+++|.+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcCC
Confidence            49999999999999999999998864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.39  E-value=0.00023  Score=54.62  Aligned_cols=48  Identities=15%  Similarity=0.107  Sum_probs=36.5

Q ss_pred             cCCCCCCCCCcccccc--cCCCCCCHHHHHHHH-hhhcCCCcccccccccC
Q 017258           65 KVPNAKPGRESTDIEI--YGMQGIPPDVLAAHY-GEEEEEVPSKMAKVDTS  112 (374)
Q Consensus        65 ~cp~~kpgr~~~~C~i--CgK~F~~~s~L~~H~-rth~ge~~~k~~k~~~~  112 (374)
                      .|.....++++|+|..  |+|.|...+.|.+|+ ++|+++++.-....+..
T Consensus        17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~~   67 (73)
T 1x3c_A           17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEE   67 (73)
T ss_dssp             CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCCC
T ss_pred             cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccccccc
Confidence            3444455666799964  999999999999997 68999988765555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.39  E-value=7.2e-05  Score=44.40  Aligned_cols=25  Identities=4%  Similarity=0.011  Sum_probs=23.1

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      .|.|.+||+.|...+.|.+|+++|.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHcc
Confidence            4999999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.37  E-value=0.00011  Score=45.21  Aligned_cols=27  Identities=11%  Similarity=0.005  Sum_probs=24.9

Q ss_pred             ccccc--ccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~--iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.  .|++.|...+.|.+|+++|.++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            48999  8999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.37  E-value=0.00011  Score=44.96  Aligned_cols=27  Identities=19%  Similarity=0.065  Sum_probs=24.7

Q ss_pred             ccccc--ccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~--iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|.|.  +||+.|...+.|.+|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            38897  9999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.36  E-value=0.00021  Score=53.74  Aligned_cols=37  Identities=19%  Similarity=0.350  Sum_probs=30.0

Q ss_pred             CCCccc-cCcCCCcccChHHHHHHhh---cCccccccCccc
Q 017258            8 VSSKVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKK   44 (374)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~   44 (374)
                      .+||+| |.+|+|.|.++.+|++|++   ...+.|.+|+..
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~   49 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP   49 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence            367888 9999999999999999999   445567666543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.46  E-value=2.9e-05  Score=46.81  Aligned_cols=27  Identities=19%  Similarity=0.161  Sum_probs=24.8

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|++|++.|...+.|.+|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            389999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.32  E-value=7.1e-05  Score=44.70  Aligned_cols=25  Identities=8%  Similarity=-0.024  Sum_probs=23.0

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      .|+|.+||+.|...+.|.+|+++|.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhcC
Confidence            4999999999999999999998873

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.26  E-value=0.00013  Score=46.96  Aligned_cols=28  Identities=21%  Similarity=0.037  Sum_probs=25.0

Q ss_pred             Ccccccc--cCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~i--CgK~F~~~s~L~~H~rth~ge  101 (374)
                      +.|.|.+  |++.|...+.|.+|+++|.++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3499985  999999999999999999876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.26  E-value=0.00013  Score=46.87  Aligned_cols=30  Identities=20%  Similarity=0.059  Sum_probs=26.5

Q ss_pred             Cccccc--ccCCCCCCHHHHHHHHhhhcCCCc
Q 017258           74 ESTDIE--IYGMQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        74 ~~~~C~--iCgK~F~~~s~L~~H~rth~ge~~  103 (374)
                      +.|.|.  .|++.|...+.|.+|+++|.++.+
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            349999  599999999999999999988764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.34  E-value=4.4e-05  Score=46.02  Aligned_cols=27  Identities=19%  Similarity=-0.026  Sum_probs=24.8

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|.+|++.|.....|.+|+++|.++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            399999999999999999999999765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.24  E-value=1.7e-05  Score=49.63  Aligned_cols=29  Identities=14%  Similarity=0.000  Sum_probs=26.4

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCCc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~~  103 (374)
                      .|+|++||+.|...+.|.+|+++|.++.+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            38999999999999999999999988764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.22  E-value=0.00015  Score=43.71  Aligned_cols=27  Identities=11%  Similarity=0.009  Sum_probs=24.3

Q ss_pred             cccccccCCCCCCHHHHHHH-HhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H-~rth~ge  101 (374)
                      .|.|..|++.|...+.|.+| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            38999999999999999999 7888775

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.30  E-value=5e-05  Score=44.68  Aligned_cols=25  Identities=20%  Similarity=0.174  Sum_probs=22.8

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      .|+|++||+.|...+.|.+|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            3899999999999999999998874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.96  E-value=0.00064  Score=50.59  Aligned_cols=52  Identities=15%  Similarity=0.185  Sum_probs=25.4

Q ss_pred             CccccCCchhhHHHHh-hhccCccccCCCCCCCCCccccc--ccCCCCCCHHHHHHHHhhh
Q 017258           41 CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        41 CgK~Fs~~s~L~rH~r-~hH~ekp~~cp~~kpgr~~~~C~--iCgK~F~~~s~L~~H~rth   98 (374)
                      |++.|.+...|.+|+. .|.+.+.      ......|.|.  .|++.+.....|..|++.+
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDF------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCC------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCccc------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            5666666666666653 2322220      0001125553  6666665666666666543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.93  E-value=0.00033  Score=41.60  Aligned_cols=26  Identities=12%  Similarity=-0.171  Sum_probs=23.7

Q ss_pred             ccccc--ccCCCCCCHHHHHHHHhhhcC
Q 017258           75 STDIE--IYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        75 ~~~C~--iCgK~F~~~s~L~~H~rth~g  100 (374)
                      .|+|.  .|++.|...+.|.+|+++|.+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            38999  999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.40  E-value=0.0013  Score=55.61  Aligned_cols=70  Identities=19%  Similarity=0.216  Sum_probs=42.9

Q ss_pred             cccCcCCCcccChHHHHHHhh-------cCccccccC------ccccCCchhhHHHHhhhccCccccCCCCCCCCCcccc
Q 017258           12 VWCYYCDREFDDEKILVQHQK-------AKHFKCHVC------HKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (374)
Q Consensus        12 p~C~~CgK~Fs~~s~Lk~H~R-------eKPfkC~~C------gK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C   78 (374)
                      ++|.+|+..|...+.+..|..       .|.|.|..+      +++|....    +..            .......|.|
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~------------~~~~~~~~~C   96 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEI------------SDGEDRSKCC   96 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCC------------SSCCCTTTEE
T ss_pred             CcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----ccc------------ccCCCCCeEc
Confidence            348888888888888877775       344444211      11221110    000            0112334889


Q ss_pred             cccCCCCCCHHHHHHHHhh
Q 017258           79 EIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        79 ~iCgK~F~~~s~L~~H~rt   97 (374)
                      ++|++.|.....|..|+..
T Consensus        97 ~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           97 PVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTTTEECSSHHHHHHHHTS
T ss_pred             CCCCCEeCCHHHHHHHHCC
Confidence            9999999999999999853

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.28  E-value=0.004  Score=46.22  Aligned_cols=46  Identities=17%  Similarity=0.327  Sum_probs=40.4

Q ss_pred             cCc--CCCcccChHHHHHHhh-----cC------ccccc--cCccccCCchhhHHHHhhhc
Q 017258           14 CYY--CDREFDDEKILVQHQK-----AK------HFKCH--VCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        14 C~~--CgK~Fs~~s~Lk~H~R-----eK------PfkC~--~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |.+  |++.|.....|.+|+.     .+      .|.|.  .|++.+.....|.+|+|..|
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            666  9999999999999985     22      79998  69999999999999998875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.73  E-value=0.0097  Score=50.23  Aligned_cols=26  Identities=12%  Similarity=0.333  Sum_probs=21.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhh
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      +++|.|..|+|.|.+...|..|.|+.
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CcceEcccCcchhCCHHHHHHHHhhh
Confidence            78888888888888888888888655

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.47  E-value=0.01  Score=50.08  Aligned_cols=22  Identities=14%  Similarity=0.034  Sum_probs=12.3

Q ss_pred             ccccccCCCCCCHHHHHHHHhh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rt   97 (374)
                      |.|..|+|.|...+.|..|+++
T Consensus        51 fyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           51 HRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             eEcccCcchhCCHHHHHHHHhh
Confidence            5555555555555555555544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.51  E-value=0.071  Score=46.26  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=51.3

Q ss_pred             ccc--CcCCCcccChHHHHHHhh---cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCC
Q 017258           12 VWC--YYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (374)
Q Consensus        12 p~C--~~CgK~Fs~~s~Lk~H~R---eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~   86 (374)
                      .+|  .-|+..+. ...|..|.+   .++..|..|+..+ .+..|..|....=..+            ...|..|+..+.
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r------------~~~C~~C~~~~~  148 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRR------------QVSCDNCAASMA  148 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTC------------EEECTTTCCEEE
T ss_pred             cCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCC------------CeECCCCCCccC
Confidence            347  45777665 456778877   5677888898887 4566778874332222            266888988765


Q ss_pred             CHHHHHHHHhhhcCCCc
Q 017258           87 PPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        87 ~~s~L~~H~rth~ge~~  103 (374)
                      . ..|..|+..+.|+..
T Consensus       149 ~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          149 F-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             G-GGHHHHHTTCCC---
T ss_pred             H-HHHHhHHHhCcChhh
Confidence            4 678999988887654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.81  E-value=0.16  Score=35.68  Aligned_cols=22  Identities=14%  Similarity=0.354  Sum_probs=13.0

Q ss_pred             ccccccCccccCCchhhHHHHh
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVL   56 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r   56 (374)
                      .|.|..|++.|...+.|++|++
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4556666666666666666653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.36  E-value=0.28  Score=34.38  Aligned_cols=23  Identities=22%  Similarity=0.411  Sum_probs=20.4

Q ss_pred             CccccCcCCCcccChHHHHHHhh
Q 017258           10 SKVWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        10 EKp~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      .++.|..|++.|...+.|++||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34559999999999999999987

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.99  E-value=0.26  Score=38.97  Aligned_cols=27  Identities=19%  Similarity=0.415  Sum_probs=21.9

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCcc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      .--.|..|||.|..   |++|+++||+..+
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCH
Confidence            34579999999984   8899999888876

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.37  E-value=0.47  Score=30.56  Aligned_cols=20  Identities=30%  Similarity=0.901  Sum_probs=14.6

Q ss_pred             ccCcCCCcccChHHHHHHhh
Q 017258           13 WCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        13 ~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      .|.+|.|.|++..+|..|+|
T Consensus        11 hcrfckkkysdvknlikhir   30 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            47777777777777777776

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.05  E-value=0.43  Score=30.75  Aligned_cols=24  Identities=29%  Similarity=0.656  Sum_probs=20.9

Q ss_pred             ccccCccccCCchhhHHHHhhhcc
Q 017258           37 KCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        37 kC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      .|.+|.|.++.-.+|.+|+|..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            499999999999999999987664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	374
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d1zr9a1	67	g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 7e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
          H   K ++C++CH + + +G M +H+LQ H ENV
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 14 CYYCDREFDDEKILVQHQKAKHFK 37
          C  C R F D   L  H ++K  K
Sbjct: 18 CLACARYFIDSTNLKTHFRSKDHK 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	374
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.44
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.75
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.73
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.73
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.67
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.64
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.63
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.59
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.58
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.55
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.51
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.49
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.47
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.43
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.42
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.41
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.36
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.35
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.31
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.27
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.22
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.2
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.12
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.08
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.01
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.97
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.78
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.61
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.6
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.55
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.53
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.49
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.39
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.35
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.3
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.19
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.14
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.12
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.02
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.02
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.95
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.75
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.75
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.69
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.65
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.58
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.44
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.37
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.25
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.24
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.81
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.79
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.76
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.72
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.54
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.21
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.75
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.59
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.45
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.14
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.1
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.56
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.12
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.54
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.3
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	92.17
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.15
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.1
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	91.98
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	91.54
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.81
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.06
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.05
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.82
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.58
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.28
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	89.19
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.14
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.75
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.98
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.33
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.14
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	84.98
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	83.87
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.05

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.6e-14  Score=103.26  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=46.6

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhh
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth   98 (374)
                      ||+|+|+ |||+|.+...|.+|+++|.++++            |.|.+||+.|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp------------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccC------------CcCCCcCCEecCHHHHHHHHhcC
Confidence            6889995 99999999999999988888876            88899999999999999998876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.5e-13  Score=96.95  Aligned_cols=48  Identities=23%  Similarity=0.521  Sum_probs=45.4

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh----cCccccccCccccCCchhhHHHHhhh
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R----eKPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      ||+| |+ |||.|.++..|++|++    +|+|+|.+||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6788 95 9999999999999999    99999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.6e-10  Score=75.54  Aligned_cols=34  Identities=24%  Similarity=0.382  Sum_probs=29.1

Q ss_pred             cCccccccCccccCCchhhHHHHh-hhccCccccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKV   66 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r-~hH~ekp~~c   66 (374)
                      +|||+|..|||+|.+.++|++|++ +|.+|++|.|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            689999999999999999999976 6888888444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=4.9e-10  Score=69.56  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=25.3

Q ss_pred             cCccccccCccccCCchhhHHHHhhhcc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      ||||+|.+|+|+|.++++|.+|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7899999999999999999999998875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=7.9e-10  Score=69.17  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=25.6

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |||+|.+|+|+|.+.++|++|+|+|++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2e-09  Score=67.29  Aligned_cols=29  Identities=21%  Similarity=0.532  Sum_probs=25.1

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |+|.|.+|+|+|.++++|.+|+|+|.+||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68889999999999999999998888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.3e-09  Score=70.13  Aligned_cols=32  Identities=25%  Similarity=0.363  Sum_probs=21.9

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccC
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |..||||+|.+|||+|.++++|.+|+|+|.+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            34467777777777777777777777776654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.1e-09  Score=72.82  Aligned_cols=26  Identities=15%  Similarity=0.043  Sum_probs=14.0

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |+|++|||.|...+.|.+|+++|+||
T Consensus        13 y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          13 YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             EecCCCCceeeCHHHHHHhCccCCCC
Confidence            55555555555555555555555543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=2.8e-09  Score=70.69  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=28.1

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||+|.+|||+|.+.++|.+|+|+|+||
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            99999999999999999999999999886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=5.9e-09  Score=69.51  Aligned_cols=32  Identities=31%  Similarity=0.627  Sum_probs=29.0

Q ss_pred             CCccc-cCcCCCcccChHHHHHHhh-----cCcccccc
Q 017258            9 SSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHV   40 (374)
Q Consensus         9 gEKp~-C~~CgK~Fs~~s~Lk~H~R-----eKPfkC~~   40 (374)
                      .+|+| |.+|||.|.+.++|++|++     ||||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            36788 9999999999999999976     99999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2.5e-09  Score=70.14  Aligned_cols=32  Identities=22%  Similarity=0.497  Sum_probs=21.9

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccC
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |..||||+|.+|+|+|.++++|.+|+++|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            33367777777777777777777777776654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=7.2e-09  Score=67.44  Aligned_cols=29  Identities=21%  Similarity=0.448  Sum_probs=23.4

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||+|.+|+|+|.++++|++|+|+|..+
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            78888888888888888888888776543

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=5.7e-09  Score=68.39  Aligned_cols=33  Identities=39%  Similarity=0.906  Sum_probs=25.9

Q ss_pred             HhhcCccccccCccccCCchhhHHHHhhhccCc
Q 017258           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        30 H~ReKPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |..||||+|.+|+|+|.++++|++|++.+|+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            444888888888888888888888887777654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=9.2e-09  Score=62.42  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=21.2

Q ss_pred             CccccccCccccCCchhhHHHHhhhc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |||+|..|||+|.++++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68888888888888888888887763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=4e-09  Score=73.18  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=25.9

Q ss_pred             HHHHhh---cCcccccc--CccccCCchhhHHHHhhhccCc
Q 017258           27 LVQHQK---AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        27 Lk~H~R---eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |.+|++   ||+|+|.+  |+|+|.++++|.+|+|+|.+||
T Consensus         7 l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            444544   77788876  8888888888888877777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2e-08  Score=63.12  Aligned_cols=28  Identities=29%  Similarity=0.478  Sum_probs=24.2

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |||+|.+  |+|+|.+.++|++|+|+|.||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6888988  999999999999998888775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=1.8e-08  Score=66.33  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=13.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhh
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      ||||+|.+|+|+|.++++|.+|+++|
T Consensus         9 eKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           9 IKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             ccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            55555555555555555555555444

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3e-08  Score=64.84  Aligned_cols=35  Identities=9%  Similarity=-0.042  Sum_probs=31.0

Q ss_pred             hhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        56 r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      |+|.+||+            |+|++|||.|.+.+.|.+|+++|++++
T Consensus         1 R~HTgekP------------y~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKP------------YACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCC------------EECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCC------------EECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46777776            999999999999999999999998764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.2e-08  Score=62.88  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=24.2

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |||+|.+  |+|+|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6889987  999999999999999888775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.1e-08  Score=62.10  Aligned_cols=29  Identities=21%  Similarity=0.447  Sum_probs=24.7

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |||+|.+  |+|+|.+.++|++|+|+|.+||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6889964  9999999999999998888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.9e-08  Score=62.58  Aligned_cols=27  Identities=15%  Similarity=0.026  Sum_probs=25.6

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|+|.+|||.|.+.+.|.+|+++|.||
T Consensus         7 py~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           7 PYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CeeCCCCCCEeCchHHhHhhccccCCC
Confidence            399999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=5.2e-08  Score=64.04  Aligned_cols=35  Identities=11%  Similarity=-0.174  Sum_probs=32.0

Q ss_pred             HHhhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      |.|+|++||+            |+|.+|+|.|.+.+.|.+|+++|..
T Consensus         2 h~R~HTgeKP------------y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccC------------eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6788999987            9999999999999999999999864

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=6.6e-08  Score=61.51  Aligned_cols=29  Identities=14%  Similarity=0.391  Sum_probs=25.8

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||.|.+  |+|+|.+.++|++|+++|..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            78999998  999999999999999888653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=6.6e-08  Score=63.18  Aligned_cols=31  Identities=16%  Similarity=0.238  Sum_probs=26.9

Q ss_pred             ccccc--CccccCCchhhHHHHhhhccCccccC
Q 017258           36 FKCHV--CHKKLSTAGGMAIHVLQVHKENVTKV   66 (374)
Q Consensus        36 fkC~~--CgK~Fs~~s~L~rH~r~hH~ekp~~c   66 (374)
                      |.|.+  |+|+|.++++|++|+|+|.++++|.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            77887  99999999999999999999988555

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.35  E-value=1.2e-07  Score=58.95  Aligned_cols=28  Identities=21%  Similarity=0.144  Sum_probs=26.3

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|.|.+|||.|...+.|.+|+++|+||+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4999999999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.6e-07  Score=58.42  Aligned_cols=28  Identities=11%  Similarity=0.027  Sum_probs=26.3

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|.|.+|||.|.+.+.|.+|+++|.+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            4999999999999999999999999874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.5e-07  Score=55.02  Aligned_cols=26  Identities=27%  Similarity=0.409  Sum_probs=22.4

Q ss_pred             ccccccCccccCCchhhHHHHhhhcc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |++|++|+|.|++++.|+.|+|.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999988764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=1.6e-07  Score=57.90  Aligned_cols=27  Identities=15%  Similarity=0.036  Sum_probs=25.1

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      ++|+|.+|+|.|.+.+.|.+|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            449999999999999999999999976

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=1.2e-07  Score=58.95  Aligned_cols=27  Identities=19%  Similarity=0.565  Sum_probs=23.2

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhcc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |||+|.+  |+|+|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6889988  99999999999999888864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2e-07  Score=57.42  Aligned_cols=26  Identities=23%  Similarity=0.629  Sum_probs=23.4

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |||+|.+  |+|+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7899988  9999999999999998874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.4e-07  Score=60.02  Aligned_cols=30  Identities=13%  Similarity=-0.006  Sum_probs=26.7

Q ss_pred             CCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           72 GRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        72 gr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |+++|+|++|+|.|.+.++|.+|+++|.++
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCCc
Confidence            444599999999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=2.1e-07  Score=55.99  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=23.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      ||||.|++||++|.+.+..+||.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999987764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.5e-07  Score=60.35  Aligned_cols=34  Identities=12%  Similarity=0.011  Sum_probs=28.7

Q ss_pred             hhhccCccccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        56 r~hH~ekp~~cp~~kpgr~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |+|++||+            |+|++|++.|.+.++|++|++.++++
T Consensus         1 R~HTgekP------------~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKP------------YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCS------------EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCC------------EeCCCCcccccchHHHHHHcccccCC
Confidence            46777776            99999999999999999998765554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.12  E-value=1.8e-07  Score=64.61  Aligned_cols=42  Identities=10%  Similarity=-0.007  Sum_probs=36.1

Q ss_pred             chhhHHHHhhhccCccccCCCCCCCCCcccccc--cCCCCCCHHHHHHHHhhhcCCC
Q 017258           48 AGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        48 ~s~L~rH~r~hH~ekp~~cp~~kpgr~~~~C~i--CgK~F~~~s~L~~H~rth~ge~  102 (374)
                      ++.|.+|+ .|.++++            |.|.+  |+|.|...+.|.+|+++|.||+
T Consensus         4 ~~~l~~h~-~h~gekp------------y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYV-KEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSC-EEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchh-hccCCCC------------eECCcCCCCccccCchHHHhhcccccCCC
Confidence            45677888 5888887            88876  9999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=5.4e-07  Score=54.46  Aligned_cols=25  Identities=12%  Similarity=-0.133  Sum_probs=23.5

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      +|+|+.|||.|.+.+.|.+|+|+|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            4999999999999999999999984

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.2e-06  Score=57.08  Aligned_cols=28  Identities=29%  Similarity=0.651  Sum_probs=25.7

Q ss_pred             ccCc--CCCcccChHHHHHHhh----cCcccccc
Q 017258           13 WCYY--CDREFDDEKILVQHQK----AKHFKCHV   40 (374)
Q Consensus        13 ~C~~--CgK~Fs~~s~Lk~H~R----eKPfkC~~   40 (374)
                      .|.+  |+|+|.++++|++|++    ||||+|+.
T Consensus         3 ~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           3 SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             ECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             ECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            3887  9999999999999999    99999973

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2e-06  Score=53.66  Aligned_cols=27  Identities=11%  Similarity=0.023  Sum_probs=24.9

Q ss_pred             cccccc--cCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~i--CgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|.|.+  |||.|...+.|++|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            388977  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2e-06  Score=53.71  Aligned_cols=27  Identities=11%  Similarity=-0.049  Sum_probs=24.7

Q ss_pred             cccccc--cCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~i--CgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|.|.+  |||.|...+.|.+|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            388866  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=6.8e-06  Score=51.59  Aligned_cols=28  Identities=18%  Similarity=0.046  Sum_probs=24.9

Q ss_pred             cccc--cccCCCCCCHHHHHHHHhhhcCCC
Q 017258           75 STDI--EIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        75 ~~~C--~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|.|  +.|||.|...++|.+|+++|++|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            3778  579999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=4.5e-06  Score=50.93  Aligned_cols=29  Identities=24%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||.|.+|..+|.+++.+.-|.|.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=9.5e-06  Score=48.43  Aligned_cols=29  Identities=17%  Similarity=0.527  Sum_probs=23.8

Q ss_pred             cCccccccCccccCCchhhHHHHhhhccC
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||||+|++|...-...+.|..|.|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68888888888888888888888887753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1e-05  Score=50.37  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=18.1

Q ss_pred             ccccccCccccCCchhhHHHHhhhccCcc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~ekp   63 (374)
                      ...|+.|||.|.....|.||...|.+||+
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            34566666666666666666666666665

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=1.2e-05  Score=49.66  Aligned_cols=26  Identities=8%  Similarity=-0.080  Sum_probs=23.4

Q ss_pred             cccccc--cCCCCCCHHHHHHHHhhhcC
Q 017258           75 STDIEI--YGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        75 ~~~C~i--CgK~F~~~s~L~~H~rth~g  100 (374)
                      +|.|.+  |+|.|...++|.+|+++|.|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            388866  99999999999999999976

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.53  E-value=2.3e-05  Score=49.40  Aligned_cols=28  Identities=11%  Similarity=0.037  Sum_probs=24.5

Q ss_pred             Ccccccc--cCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~i--CgK~F~~~s~L~~H~rth~ge  101 (374)
                      ++|.|.+  |+|.|...++|.+|+++|...
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            3488876  999999999999999999764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.9e-05  Score=46.83  Aligned_cols=27  Identities=22%  Similarity=0.327  Sum_probs=18.4

Q ss_pred             ccccccCccccCCchhhHHHHhhhccC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      -+.|..|||.|...+.|+||...|++|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            456777777777777777777666553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=2.7e-05  Score=47.24  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=20.0

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhcc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |||.|.+  |+|++...++|++|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777776  77777777777777777664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=4.6e-05  Score=45.63  Aligned_cols=23  Identities=30%  Similarity=0.608  Sum_probs=21.4

Q ss_pred             Cccc-cCcCCCcccChHHHHHHhh
Q 017258           10 SKVW-CYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        10 EKp~-C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      ||+| |.+||+.|.++...++|.+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k   24 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK   24 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG
T ss_pred             CCCcccchhhhhhhcchhhhhhhh
Confidence            6888 9999999999999999976

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=3.1e-05  Score=47.33  Aligned_cols=25  Identities=8%  Similarity=-0.092  Sum_probs=22.1

Q ss_pred             cccccc--cCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEI--YGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~i--CgK~F~~~s~L~~H~rth~   99 (374)
                      +|.|..  |||.|...++|++|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            377865  9999999999999999984

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=7.6e-05  Score=43.38  Aligned_cols=25  Identities=20%  Similarity=0.110  Sum_probs=23.3

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      .+|+.|+|-|..++.|+.|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5799999999999999999999975

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=8.3e-05  Score=43.47  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=22.5

Q ss_pred             ccccCccccCCchhhHHHHhhhccCc
Q 017258           37 KCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        37 kC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      +|..|.|+|.++..|+.|.|.|++|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58889999999999999998888874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=7.2e-05  Score=46.48  Aligned_cols=32  Identities=25%  Similarity=0.110  Sum_probs=28.6

Q ss_pred             CCcccccccCCCCCCHHHHHHHHhhhcCCCcc
Q 017258           73 RESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (374)
Q Consensus        73 r~~~~C~iCgK~F~~~s~L~~H~rth~ge~~~  104 (374)
                      |+...|++|||.|.+...|.+|..+|.+|++.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            44578999999999999999999999999864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.14  E-value=7.6e-05  Score=45.67  Aligned_cols=27  Identities=15%  Similarity=0.528  Sum_probs=24.4

Q ss_pred             ccccccCccccCCchhhHHHHhhhccC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      ||.|.+|++.|.+++.|.||...-|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999999877765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00014  Score=43.66  Aligned_cols=28  Identities=18%  Similarity=0.568  Sum_probs=25.0

Q ss_pred             CccccccCccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |||.|++|..+....++|+.|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6899999999999999999999988864

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00012  Score=43.25  Aligned_cols=27  Identities=19%  Similarity=0.442  Sum_probs=22.9

Q ss_pred             cCccccccCccccCCchhhHHHHhhhc
Q 017258           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        33 eKPfkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      .|||+|..|+..-...++|.+|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            378999999999899999999988764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00016  Score=41.63  Aligned_cols=23  Identities=17%  Similarity=0.531  Sum_probs=17.5

Q ss_pred             cccccCccccCCchhhHHHHhhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      |+|..|.+.|..++.|.||+|.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            57778888888888888887655

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00016  Score=43.34  Aligned_cols=28  Identities=21%  Similarity=0.576  Sum_probs=24.3

Q ss_pred             CccccccCccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |||+|.+|...-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6899999988888899999999888864

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.0002  Score=42.68  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=20.4

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhh
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~h   58 (374)
                      .||+|.+  |+|+|...+.|+||.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788876  888888888888888665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00034  Score=42.48  Aligned_cols=28  Identities=11%  Similarity=0.172  Sum_probs=25.6

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      ++|.|.+|+.+|..++.+.-|.|+|+|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            3499999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00033  Score=41.41  Aligned_cols=26  Identities=15%  Similarity=-0.021  Sum_probs=23.9

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      ..|..|||.|+..+.|++|.-.|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.69  E-value=0.00033  Score=41.93  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=23.9

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |||.|..  |.|.|.+...|.||..+|.+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6888876  999999999999999888765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00049  Score=40.99  Aligned_cols=26  Identities=12%  Similarity=0.301  Sum_probs=14.9

Q ss_pred             cccccCccccCCchhhHHHHhhhccC
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |.|.+|+......+-|++|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555566666555544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00037  Score=42.53  Aligned_cols=27  Identities=30%  Similarity=0.456  Sum_probs=21.0

Q ss_pred             Ccccccc--CccccCCchhhHHHH-hhhcc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHV-LQVHK   60 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~-r~hH~   60 (374)
                      |||.|++  |.|.|+..++-.+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6788887  888888888888886 66643

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.0011  Score=39.48  Aligned_cols=27  Identities=19%  Similarity=0.227  Sum_probs=25.1

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      |.|+.||......+.|++|.|+|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999863

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00077  Score=40.71  Aligned_cols=25  Identities=12%  Similarity=0.040  Sum_probs=21.9

Q ss_pred             ccccc--cCCCCCCHHHHHHHHhhhcC
Q 017258           76 TDIEI--YGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        76 ~~C~i--CgK~F~~~s~L~~H~rth~g  100 (374)
                      |.|.+  |+|++.+.+.|++|+++++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77764  99999999999999998764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.25  E-value=0.0009  Score=43.07  Aligned_cols=29  Identities=14%  Similarity=0.535  Sum_probs=20.6

Q ss_pred             CccccccCccccCCchhhHHHHhhhccCc
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~ek   62 (374)
                      |.|+|.+|+|.|.+-..|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45777777777777777777776665443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0011  Score=39.31  Aligned_cols=28  Identities=11%  Similarity=0.119  Sum_probs=25.2

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      ++|+|.+|.....+.+.|..|+|.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4599999999999999999999999874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0015  Score=38.32  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=17.8

Q ss_pred             ccccccCccccCCchhhHHHHh
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVL   56 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r   56 (374)
                      ||+|..|||.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888888763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0013  Score=42.91  Aligned_cols=22  Identities=27%  Similarity=0.691  Sum_probs=15.7

Q ss_pred             CccccccCccccCCchhhHHHH
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~   55 (374)
                      |||.|.+|+|+|--++++.||.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            6677777777777777777775

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0017  Score=41.68  Aligned_cols=27  Identities=22%  Similarity=0.564  Sum_probs=20.6

Q ss_pred             cCcccccc--CccccCCchhhHHHHhhhc
Q 017258           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        33 eKPfkC~~--CgK~Fs~~s~L~rH~r~hH   59 (374)
                      +|||.|..  |+.+|...+.|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            67888855  8888888888888875553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.002  Score=41.97  Aligned_cols=25  Identities=12%  Similarity=0.042  Sum_probs=21.7

Q ss_pred             CcccccccCCCCCCHHHHHHHHhhh
Q 017258           74 ESTDIEIYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        74 ~~~~C~iCgK~F~~~s~L~~H~rth   98 (374)
                      ++|+|.+|+|+|.+.+.+.+|....
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhhhh
Confidence            4599999999999999999997543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.76  E-value=0.0032  Score=36.05  Aligned_cols=24  Identities=8%  Similarity=0.025  Sum_probs=22.2

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhc
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      |+|..|.++|..++.|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            679999999999999999999884

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.72  E-value=0.0038  Score=36.24  Aligned_cols=26  Identities=12%  Similarity=0.029  Sum_probs=24.1

Q ss_pred             cccccCCCCCCHHHHHHHHhhhcCCC
Q 017258           77 DIEIYGMQGIPPDVLAAHYGEEEEEV  102 (374)
Q Consensus        77 ~C~iCgK~F~~~s~L~~H~rth~ge~  102 (374)
                      +|.+|.|.|..+..|+.|-|.|.||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0026  Score=37.87  Aligned_cols=23  Identities=22%  Similarity=0.615  Sum_probs=14.2

Q ss_pred             ccccccCccccCCchhhHHHHhh
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~   57 (374)
                      ||.|..|...|.++++|.+|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45666666666666666666643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.51  E-value=0.0031  Score=37.49  Aligned_cols=28  Identities=21%  Similarity=0.558  Sum_probs=19.3

Q ss_pred             CccccccCccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      .-|.|.+|...|.++-.|+.|+-.|+||
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4567777777777777777777666553

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.21  E-value=0.0038  Score=35.83  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=19.0

Q ss_pred             cccccCccccCCchhhHHHHhhhc
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH   59 (374)
                      |.|.+|-|.|.+++++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568888888888888888887665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.75  E-value=0.0084  Score=38.38  Aligned_cols=29  Identities=10%  Similarity=0.053  Sum_probs=25.9

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCCCc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge~~  103 (374)
                      .|+|.+|++.|.....|--|++.|..+..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ccCCCCCCCccCCcccccchHhhhcchHH
Confidence            39999999999999999999999977653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.0059  Score=38.01  Aligned_cols=26  Identities=27%  Similarity=0.446  Sum_probs=21.0

Q ss_pred             ccccccCccccCCchhhHHHHhhhcc
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      -|.|.+|+|+|.++..+.||.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999988755444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.59  E-value=0.0087  Score=35.07  Aligned_cols=25  Identities=8%  Similarity=0.040  Sum_probs=23.1

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhc
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~   99 (374)
                      +|+|..|...-.+.+.|.+|+|+|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            3999999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.0098  Score=35.28  Aligned_cols=21  Identities=33%  Similarity=0.776  Sum_probs=19.6

Q ss_pred             cc-cCcCCCcccChHHHHHHhh
Q 017258           12 VW-CYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        12 p~-C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      +| |.+|+-.|..+.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            35 9999999999999999998

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.0052  Score=37.35  Aligned_cols=26  Identities=15%  Similarity=-0.102  Sum_probs=22.1

Q ss_pred             ccccc--cCCCCCCHHHHHHHH-hhhcCC
Q 017258           76 TDIEI--YGMQGIPPDVLAAHY-GEEEEE  101 (374)
Q Consensus        76 ~~C~i--CgK~F~~~s~L~~H~-rth~ge  101 (374)
                      |.|++  |.|.|...++..+|+ |+|..|
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             ccccCCChhhhhcchhhhhhhccccccCC
Confidence            77765  999999999999997 888654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.10  E-value=0.011  Score=34.99  Aligned_cols=23  Identities=17%  Similarity=-0.012  Sum_probs=20.6

Q ss_pred             ccc--cccCCCCCCHHHHHHHHhhh
Q 017258           76 TDI--EIYGMQGIPPDVLAAHYGEE   98 (374)
Q Consensus        76 ~~C--~iCgK~F~~~s~L~~H~rth   98 (374)
                      |+|  +.|+|.|...+.|++|.+.|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            566  68999999999999999887

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.016  Score=38.84  Aligned_cols=23  Identities=26%  Similarity=0.495  Sum_probs=15.4

Q ss_pred             cccccCccccCCchhhHHHHhhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      |.|-.|+|.|.....|++|..+|
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHhc
Confidence            56777777777777777776443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.025  Score=37.88  Aligned_cols=25  Identities=12%  Similarity=0.036  Sum_probs=22.7

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      |.|-+|||.|.+...|++|...|--
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeccccccccCCHHHHhHhHHhcCc
Confidence            8899999999999999999988743

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.032  Score=33.10  Aligned_cols=27  Identities=11%  Similarity=0.147  Sum_probs=23.3

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      +|+|..|...-.+.++|.+|++..+++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            499999999889999999999876553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.30  E-value=0.035  Score=32.81  Aligned_cols=26  Identities=12%  Similarity=-0.123  Sum_probs=24.5

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |.|..|...|...-.|+.|+-+|.|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            88999999999999999999999885

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=92.17  E-value=0.035  Score=33.56  Aligned_cols=25  Identities=12%  Similarity=-0.001  Sum_probs=21.9

Q ss_pred             ccccccCCCCCCHHHHHHHHhhhcC
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      |.|.+|++.|..++-|.+|.+.-++
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cccccccchhhHHHHHHHHHHHHhc
Confidence            8999999999999999999876433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.017  Score=41.81  Aligned_cols=26  Identities=31%  Similarity=0.452  Sum_probs=20.1

Q ss_pred             ccccCcCCCcccChHHHHHHhhcCcc
Q 017258           11 KVWCYYCDREFDDEKILVQHQKAKHF   36 (374)
Q Consensus        11 Kp~C~~CgK~Fs~~s~Lk~H~ReKPf   36 (374)
                      .+||..|+|.|.+...|..|++.|.|
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksKkH   40 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSKDH   40 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             EEecccccCccCCHHHHHHHHcccHH
Confidence            46788899999888888888774433

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.10  E-value=0.031  Score=31.80  Aligned_cols=21  Identities=19%  Similarity=0.626  Sum_probs=11.9

Q ss_pred             ccccccCccccCCchhhHHHH
Q 017258           35 HFKCHVCHKKLSTAGGMAIHV   55 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~   55 (374)
                      ||+|..|...|.++..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.064  Score=31.82  Aligned_cols=26  Identities=8%  Similarity=0.129  Sum_probs=22.9

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~g  100 (374)
                      +|+|..|..+..+.++|+.|.++.++
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            39999999999999999999988544

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.041  Score=35.01  Aligned_cols=26  Identities=23%  Similarity=0.074  Sum_probs=22.7

Q ss_pred             Ccccc--cccCCCCCCHHHHHHHHhhhc
Q 017258           74 ESTDI--EIYGMQGIPPDVLAAHYGEEE   99 (374)
Q Consensus        74 ~~~~C--~iCgK~F~~~s~L~~H~rth~   99 (374)
                      ++|.|  ..|+++|...+.|..|++.|+
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhhhhhe
Confidence            44888  689999999999999998886

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.81  E-value=0.078  Score=30.80  Aligned_cols=21  Identities=14%  Similarity=0.029  Sum_probs=19.5

Q ss_pred             ccccccCCCCCCHHHHHHHHh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYG   96 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~r   96 (374)
                      |+|..|||.+..+++|..|..
T Consensus         2 f~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHH
Confidence            899999999999999999974

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.06  E-value=0.08  Score=30.16  Aligned_cols=20  Identities=30%  Similarity=0.780  Sum_probs=18.4

Q ss_pred             c-cCcCCCcccChHHHHHHhh
Q 017258           13 W-CYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        13 ~-C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      | |.+|-|.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            5 9999999999999999975

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.05  E-value=0.1  Score=30.86  Aligned_cols=25  Identities=44%  Similarity=0.911  Sum_probs=20.3

Q ss_pred             cccccCccccCCchhhHHHHhhhcc
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |.|..|||.+++...++-|+..-|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            7888888888888888888866554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.82  E-value=0.074  Score=31.06  Aligned_cols=24  Identities=25%  Similarity=0.333  Sum_probs=18.4

Q ss_pred             ccccccCccccCCchhhHHHHhhh
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~h   58 (374)
                      |-||..|.+..+.+..|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            457888888888888888887765

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.58  E-value=0.071  Score=31.55  Aligned_cols=26  Identities=15%  Similarity=-0.141  Sum_probs=22.7

Q ss_pred             ccc--cccCCCCCCHHHHHHHHhhhcCC
Q 017258           76 TDI--EIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        76 ~~C--~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      |.|  +.|.|.|..--.|.+|.-+|.||
T Consensus         3 fpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             EECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             cCcccccccccchhhhhhhhhhccccCC
Confidence            555  68999999999999999999875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.28  E-value=0.099  Score=32.37  Aligned_cols=17  Identities=6%  Similarity=0.079  Sum_probs=8.6

Q ss_pred             ccCCchhhHHHHhhhcc
Q 017258           44 KLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        44 ~Fs~~s~L~rH~r~hH~   60 (374)
                      .|..+..|..|+|.|++
T Consensus        16 pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCSSHHHHHHHTHHHHC
T ss_pred             cchhHHHHHHHHhhcCC
Confidence            34455555555555544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.19  E-value=0.11  Score=30.28  Aligned_cols=22  Identities=18%  Similarity=0.661  Sum_probs=11.1

Q ss_pred             cccccCccccCCchhhHHHHhh
Q 017258           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (374)
Q Consensus        36 fkC~~CgK~Fs~~s~L~rH~r~   57 (374)
                      |.|..|+.-..++++|+.|+|.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            4455555555555555555443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.14  E-value=0.073  Score=30.83  Aligned_cols=18  Identities=17%  Similarity=0.444  Sum_probs=9.4

Q ss_pred             CccccCCchhhHHHHhhh
Q 017258           41 CHKKLSTAGGMAIHVLQV   58 (374)
Q Consensus        41 CgK~Fs~~s~L~rH~r~h   58 (374)
                      |+|.|..-..|+.|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.75  E-value=0.096  Score=30.48  Aligned_cols=22  Identities=27%  Similarity=0.410  Sum_probs=17.2

Q ss_pred             ccccCcCCCcccChHHHHHHhh
Q 017258           11 KVWCYYCDREFDDEKILVQHQK   32 (374)
Q Consensus        11 Kp~C~~CgK~Fs~~s~Lk~H~R   32 (374)
                      |+.|.+|+....++++|..|+|
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            4558888888888888888876

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.98  E-value=0.11  Score=29.46  Aligned_cols=22  Identities=14%  Similarity=-0.013  Sum_probs=20.2

Q ss_pred             ccccccCCCCCCHHHHHHHHhh
Q 017258           76 TDIEIYGMQGIPPDVLAAHYGE   97 (374)
Q Consensus        76 ~~C~iCgK~F~~~s~L~~H~rt   97 (374)
                      |+|..|...|.++.+|..|+-.
T Consensus         3 ykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999853

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.33  E-value=0.15  Score=30.08  Aligned_cols=27  Identities=30%  Similarity=0.675  Sum_probs=20.5

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhcc
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~   60 (374)
                      |-|+|+.  |+-+|..+.++++|....|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            4577865  88888888888888766554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.14  E-value=0.14  Score=31.69  Aligned_cols=27  Identities=22%  Similarity=0.636  Sum_probs=19.6

Q ss_pred             ccccccCccccCCchhhHHHHhhhccC
Q 017258           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        35 PfkC~~CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      -|.|.+|.+.+..-+++.||..+.|..
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            477777888777777887777666543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.98  E-value=0.28  Score=30.19  Aligned_cols=27  Identities=11%  Similarity=-0.029  Sum_probs=23.3

Q ss_pred             cccccccCCCCCCHHHHHHHHhhhcCC
Q 017258           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (374)
Q Consensus        75 ~~~C~iCgK~F~~~s~L~~H~rth~ge  101 (374)
                      .|.|..|||.|..+..+.+|-....|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            389999999999999999998776654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.87  E-value=0.21  Score=35.21  Aligned_cols=31  Identities=26%  Similarity=0.660  Sum_probs=16.0

Q ss_pred             cCcCCCcccChHHHHHHhh-cCccccccCccc
Q 017258           14 CYYCDREFDDEKILVQHQK-AKHFKCHVCHKK   44 (374)
Q Consensus        14 C~~CgK~Fs~~s~Lk~H~R-eKPfkC~~CgK~   44 (374)
                      |..|++.|+....++.--- .--|.|.+|+..
T Consensus        17 Cp~C~~~ys~Lda~~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          17 CPVCSSTFTDLEANQLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSCCEEEHHHHHHHEETTTTEEBCSSSCCB
T ss_pred             CCCCCCCcchhhHHHhcCcCCCeEEecCCCCE
Confidence            6666666665554443111 344666666543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.05  E-value=0.27  Score=29.40  Aligned_cols=28  Identities=18%  Similarity=0.386  Sum_probs=19.0

Q ss_pred             Ccccccc--CccccCCchhhHHHHhhhccC
Q 017258           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (374)
Q Consensus        34 KPfkC~~--CgK~Fs~~s~L~rH~r~hH~e   61 (374)
                      |.|.|.+  |+..|.....|.-|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4566665  777777777777777666654