Citrus Sinensis ID: 017263
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| 255563106 | 370 | conserved hypothetical protein [Ricinus | 0.973 | 0.983 | 0.734 | 1e-161 | |
| 224114702 | 362 | predicted protein [Populus trichocarpa] | 0.967 | 1.0 | 0.713 | 1e-157 | |
| 449462645 | 373 | PREDICTED: uncharacterized protein LOC10 | 0.959 | 0.962 | 0.702 | 1e-155 | |
| 356555410 | 375 | PREDICTED: uncharacterized protein LOC10 | 0.909 | 0.906 | 0.723 | 1e-153 | |
| 357446949 | 360 | hypothetical protein MTR_2g015720 [Medic | 0.957 | 0.994 | 0.691 | 1e-152 | |
| 224076992 | 411 | predicted protein [Populus trichocarpa] | 0.967 | 0.880 | 0.645 | 1e-151 | |
| 388514377 | 361 | unknown [Lotus japonicus] | 0.954 | 0.988 | 0.693 | 1e-151 | |
| 356521442 | 368 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.978 | 0.680 | 1e-151 | |
| 297851330 | 380 | hypothetical protein ARALYDRAFT_473111 [ | 0.882 | 0.868 | 0.725 | 1e-151 | |
| 18396930 | 380 | protein trichome birefringence-like 38 [ | 0.882 | 0.868 | 0.722 | 1e-150 |
| >gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/380 (73%), Positives = 318/380 (83%), Gaps = 16/380 (4%)
Query: 1 MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
MGF S VL+ Q VLL + L+E A+QH YNVT L +GRKQVS CNLFQG+W
Sbjct: 1 MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59
Query: 55 VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60 VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119
Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
+IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179
Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRL 234
IV++ VGRVL L+SI+ G WK MD+LIFNSWHWWTHTG++QPWDY++ G +L KDMDRL
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQPWDYVRAGASLYKDMDRL 239
Query: 235 EAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELE 294
EAFY+GMSTWA+WVD NVDP++TKVFFQGISPTHY G+EWN KK+C GE E
Sbjct: 240 EAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHY--------EGREWNQPKKSCNGEAE 291
Query: 295 PLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSH 354
PLSGSTYPGGAPPA +VVNKVLS+I KPVYLLDITTLSQLRKDAHPSTY G SGTDCSH
Sbjct: 292 PLSGSTYPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSH 350
Query: 355 WCLPGLPDTWNQLLYAALTM 374
WCLPGLPDTWNQLLYAAL M
Sbjct: 351 WCLPGLPDTWNQLLYAALVM 370
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449462645|ref|XP_004149051.1| PREDICTED: uncharacterized protein LOC101203509 [Cucumis sativus] gi|449509029|ref|XP_004163473.1| PREDICTED: uncharacterized LOC101203509 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224076992|ref|XP_002305083.1| predicted protein [Populus trichocarpa] gi|222848047|gb|EEE85594.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|388514377|gb|AFK45250.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18396930|ref|NP_564318.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] gi|18377638|gb|AAL66969.1| unknown protein [Arabidopsis thaliana] gi|20465655|gb|AAM20296.1| unknown protein [Arabidopsis thaliana] gi|110742767|dbj|BAE99289.1| hypothetical protein [Arabidopsis thaliana] gi|332192916|gb|AEE31037.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.882 | 0.868 | 0.722 | 4.2e-143 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.877 | 0.851 | 0.710 | 3.5e-139 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.866 | 0.882 | 0.624 | 6.7e-120 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.895 | 0.920 | 0.596 | 3e-117 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.844 | 0.887 | 0.550 | 3.8e-101 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.863 | 0.899 | 0.511 | 1.7e-98 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.866 | 0.805 | 0.498 | 1.4e-87 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.874 | 0.821 | 0.470 | 2.9e-80 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.860 | 0.529 | 0.403 | 8e-69 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.860 | 0.579 | 0.401 | 2.7e-68 |
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 247/342 (72%), Positives = 293/342 (85%)
Query: 36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
+SLRG+KQ SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct: 48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107
Query: 94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++ LS
Sbjct: 108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167
Query: 154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
+++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G WK+MDVL+FNSWHWWTH
Sbjct: 168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227
Query: 213 GKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFI 272
G++Q WDYI+DG +L++DM+RL+AFYKG+STWARWVD NVD ++T+VFFQGISPTHY
Sbjct: 228 GQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHY--- 284
Query: 273 SLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 332
G+EWN +K C G+++PL GS+YP G PP++ VV+KVLSS+ KPV LLDITTLS
Sbjct: 285 -----EGREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLS 339
Query: 333 QLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM 374
QLRKDAHPS+Y G GTDCSHWCLPGLPDTWNQLLYAALTM
Sbjct: 340 QLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAALTM 380
|
|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00110748 | hypothetical protein (362 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 374 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-143 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-104 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 8e-26 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-143
Identities = 186/343 (54%), Positives = 223/343 (65%), Gaps = 23/343 (6%)
Query: 45 SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
S C LF G WV D SYPLY SS CP ID EF+C YGRPD YLKY WQP +C +PRF+
Sbjct: 51 STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110
Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
G +FL + +GK +MFVGDSL N WESL C+I +SVP+ +T R + LS+ F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170
Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQ 222
+ Y+ PYLVDI + RVL L I W+D DVLIFN+ HWW+H G Q WDYI+
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIE 230
Query: 223 DGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEW 282
G T +DMDRL A K + TWA WVD NVD S+T+VFFQ ISPTHY EW
Sbjct: 231 SGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYN--------PSEW 282
Query: 283 N----SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDA 338
+ + KNC GE P+SG TYPG P VV++V+ ++ P YLLDIT LS+LRKD
Sbjct: 283 SAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDG 342
Query: 339 HPSTYSGKHSGT---------DCSHWCLPGLPDTWNQLLYAAL 372
HPS YSG S + DCSHWCLPGLPDTWNQL Y AL
Sbjct: 343 HPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.54 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.41 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.92 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 94.94 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 94.48 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 93.15 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 90.62 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 88.49 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 85.49 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-111 Score=832.51 Aligned_cols=325 Identities=57% Similarity=1.103 Sum_probs=299.8
Q ss_pred CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCCCcccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017263 42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG 120 (374)
Q Consensus 42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~L~rfd~~~fl~~LrgK~i~FVG 120 (374)
..++.||+|+|+||+|+++|+|++++|| ||++++||++|||||.+|++|||||++|+||||||.+||++||||+|+|||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 4457899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhhhccCCCCceeeeccCcceeEEeeecCeEEEEEecccccceecccccceEEeccccc-CCCCCccc
Q 017263 121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD 199 (374)
Q Consensus 121 DSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D 199 (374)
|||+|||||||+|||++++|........+++..+|+|++||+||+||||||||+.+.....++++||+++. ++.|+++|
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D 207 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD 207 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence 99999999999999999888665444456778899999999999999999999987666567999999986 78899999
Q ss_pred EEEEcccccccccCCCCCcceecCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCcccccccccccC
Q 017263 200 VLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRG 279 (374)
Q Consensus 200 vlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~t~Vf~Rt~sP~Hf~~~~~~~~~~ 279 (374)
||||||||||.+.+..++++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+|| +|
T Consensus 208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hf--------e~ 279 (387)
T PLN02629 208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHY--------NP 279 (387)
T ss_pred EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccc--------cC
Confidence 9999999999999888889999999999999999999999999999999999988899999999999999 99
Q ss_pred cccccC----CCCCCCCcccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccccccCCCCCCcCCC---------
Q 017263 280 KEWNSR----KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK--------- 346 (374)
Q Consensus 280 g~W~~~----gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y~~~--------- 346 (374)
|+||.. +|+|+++|+|+.+++++++...+++++++++++++.+|++||||+||++|||||||+|++.
T Consensus 280 g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p 359 (387)
T PLN02629 280 SEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANP 359 (387)
T ss_pred CCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCC
Confidence 999942 2479999999998888777777888999999999999999999999999999999999642
Q ss_pred CCCCCceeeccCCchhHHHHHHHHHHhC
Q 017263 347 HSGTDCSHWCLPGLPDTWNQLLYAALTM 374 (374)
Q Consensus 347 ~~~~DC~HwClPGv~D~WN~lL~~~L~~ 374 (374)
..++||+||||||||||||||||++|+.
T Consensus 360 ~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 360 DRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred CCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 3468999999999999999999999974
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.88 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 93.59 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00097 Score=58.46 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=55.6
Q ss_pred cccEEEEcccccccccCCCCCcceecCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCccccccccc
Q 017263 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTE 276 (374)
Q Consensus 197 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~t~Vf~Rt~sP~Hf~~~~~~~ 276 (374)
.+|+|||+.|..=.. ...+.|++.++++.+-+.+. .++++|++-+..|...
T Consensus 74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~------- 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT------- 124 (200)
T ss_dssp CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE-------
T ss_pred CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc-------
Confidence 389999999975211 01457788888887776553 3567899999988654
Q ss_pred ccCcccccCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccc
Q 017263 277 TRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQL 334 (374)
Q Consensus 277 ~~~g~W~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDit~ls~~ 334 (374)
. .+.. ...+.. ......+++++++.++ ..+.++|++..+.-
T Consensus 125 -~--~~~~----~~~~~~--------~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~ 165 (200)
T 4h08_A 125 -G--EGMK----EFAPIT--------ERLNVRNQIALKHINR--ASIEVNDLWKVVID 165 (200)
T ss_dssp -S--GGGC----EECTHH--------HHHHHHHHHHHHHHHH--TTCEEECHHHHHTT
T ss_pred -c--cccc----ccchhH--------HHHHHHHHHHHHHhhh--cceEEEecHHhHhc
Confidence 1 1110 000000 0012345677777776 57899999876653
|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.86 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.1 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.88 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.86 E-value=0.0013 Score=55.95 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=18.8
Q ss_pred hHHHHHHHHHhhCCCCeeEeecccccc
Q 017263 307 PAASVVNKVLSSINKPVYLLDITTLSQ 333 (374)
Q Consensus 307 ~~~~~v~~~~~~~~~~v~lLDit~ls~ 333 (374)
..+++++++.++ ..+.++|++.++.
T Consensus 137 ~~~~~~~~~a~~--~~v~~vD~~~~~~ 161 (208)
T d2o14a2 137 WYRASILALAEE--EKTYLIDLNVLSS 161 (208)
T ss_dssp TTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred HHHHHHHHhhcc--CCcEEeccHHHHH
Confidence 356788888777 4688999987764
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|