Citrus Sinensis ID: 017263


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccccccccccccEEEEEEEccEEEEEEcccEEEEEEEcccccEEEEcccccccccccccEEEEEcccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcc
ccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEccccccccccccccccccccccHcccccHHHHEEEEcccccccccccHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEEcccEEEEEEEEccEEEEEEEccEEEEEcccccccEEEEccccccHHcccccEEEEEcEEEEcccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHc
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTslrgrkqvsgcnlfqgrwvidpsyplydssscpfidaefdclkygrpdkqylkyswqpascavprfdggdflrryrgkrimfvgdSLSLNMWESLSCMIhasvpnaktsfvrketlssvsfEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNsiqagkfwkDMDVLIFNSWHwwthtgkaqpwdyiqdGQTLLKDMDRLEAFYKGMSTWARWvdlnvdpsqtkvffqgispthyTFISLTETrgkewnsrkknclgeleplsgstypggappaASVVNKVLSsinkpvyllDITTLsqlrkdahpstysgkhsgtdcshwclpglpdtWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYnvtslrgrkqVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKqylkyswqpascavprFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTetrgkewnsrKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHvllfwlfqfvllSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
***GSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWN*****CL*******************SVVNKVLSSINKPVYLLDITTLSQLR************SGTDCSHWCLPGLPDTWNQLLYAAL**
*GFGSHVLLFWLFQFVLLSSMLL*************************LFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKD************TDCSHWCLPGLPDTWNQLLYAALTM
*GFGSHVLLFWLFQFVLLSSMLLKEAE*****************SGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEW*****NCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
255563106370 conserved hypothetical protein [Ricinus 0.973 0.983 0.734 1e-161
224114702362 predicted protein [Populus trichocarpa] 0.967 1.0 0.713 1e-157
449462645373 PREDICTED: uncharacterized protein LOC10 0.959 0.962 0.702 1e-155
356555410375 PREDICTED: uncharacterized protein LOC10 0.909 0.906 0.723 1e-153
357446949360 hypothetical protein MTR_2g015720 [Medic 0.957 0.994 0.691 1e-152
224076992411 predicted protein [Populus trichocarpa] 0.967 0.880 0.645 1e-151
388514377361 unknown [Lotus japonicus] 0.954 0.988 0.693 1e-151
356521442368 PREDICTED: uncharacterized protein LOC10 0.962 0.978 0.680 1e-151
297851330380 hypothetical protein ARALYDRAFT_473111 [ 0.882 0.868 0.725 1e-151
18396930380 protein trichome birefringence-like 38 [ 0.882 0.868 0.722 1e-150
>gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/380 (73%), Positives = 318/380 (83%), Gaps = 16/380 (4%)

Query: 1   MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
           MGF S     VL+    Q VLL +  L+E  A+QH YNVT L +GRKQVS  CNLFQG+W
Sbjct: 1   MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59

Query: 55  VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
           V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60  VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119

Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
           +IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179

Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRL 234
           IV++ VGRVL L+SI+ G  WK MD+LIFNSWHWWTHTG++QPWDY++ G +L KDMDRL
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQPWDYVRAGASLYKDMDRL 239

Query: 235 EAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEWNSRKKNCLGELE 294
           EAFY+GMSTWA+WVD NVDP++TKVFFQGISPTHY         G+EWN  KK+C GE E
Sbjct: 240 EAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHY--------EGREWNQPKKSCNGEAE 291

Query: 295 PLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSH 354
           PLSGSTYPGGAPPA +VVNKVLS+I KPVYLLDITTLSQLRKDAHPSTY G  SGTDCSH
Sbjct: 292 PLSGSTYPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSH 350

Query: 355 WCLPGLPDTWNQLLYAALTM 374
           WCLPGLPDTWNQLLYAAL M
Sbjct: 351 WCLPGLPDTWNQLLYAALVM 370




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449462645|ref|XP_004149051.1| PREDICTED: uncharacterized protein LOC101203509 [Cucumis sativus] gi|449509029|ref|XP_004163473.1| PREDICTED: uncharacterized LOC101203509 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] Back     alignment and taxonomy information
>gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224076992|ref|XP_002305083.1| predicted protein [Populus trichocarpa] gi|222848047|gb|EEE85594.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388514377|gb|AFK45250.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] Back     alignment and taxonomy information
>gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18396930|ref|NP_564318.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] gi|18377638|gb|AAL66969.1| unknown protein [Arabidopsis thaliana] gi|20465655|gb|AAM20296.1| unknown protein [Arabidopsis thaliana] gi|110742767|dbj|BAE99289.1| hypothetical protein [Arabidopsis thaliana] gi|332192916|gb|AEE31037.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.882 0.868 0.722 4.2e-143
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.877 0.851 0.710 3.5e-139
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.866 0.882 0.624 6.7e-120
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.895 0.920 0.596 3e-117
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.844 0.887 0.550 3.8e-101
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.863 0.899 0.511 1.7e-98
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.866 0.805 0.498 1.4e-87
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.874 0.821 0.470 2.9e-80
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.860 0.529 0.403 8e-69
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.860 0.579 0.401 2.7e-68
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
 Identities = 247/342 (72%), Positives = 293/342 (85%)

Query:    36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
             +SLRG+KQ   SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct:    48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107

Query:    94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
             P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++  LS
Sbjct:   108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167

Query:   154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
             +++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G   WK+MDVL+FNSWHWWTH 
Sbjct:   168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227

Query:   213 GKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFI 272
             G++Q WDYI+DG +L++DM+RL+AFYKG+STWARWVD NVD ++T+VFFQGISPTHY   
Sbjct:   228 GQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHY--- 284

Query:   273 SLTETRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 332
                   G+EWN  +K C G+++PL GS+YP G PP++ VV+KVLSS+ KPV LLDITTLS
Sbjct:   285 -----EGREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLS 339

Query:   333 QLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM 374
             QLRKDAHPS+Y G   GTDCSHWCLPGLPDTWNQLLYAALTM
Sbjct:   340 QLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAALTM 380




GO:0008150 "biological_process" evidence=ND
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00110748
hypothetical protein (362 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-143
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-104
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 8e-26
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  410 bits (1055), Expect = e-143
 Identities = 186/343 (54%), Positives = 223/343 (65%), Gaps = 23/343 (6%)

Query: 45  SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
           S C LF G WV D SYPLY SS CP  ID EF+C  YGRPD  YLKY WQP +C +PRF+
Sbjct: 51  STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110

Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
           G +FL + +GK +MFVGDSL  N WESL C+I +SVP+ +T   R + LS+  F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170

Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQ 222
           +  Y+ PYLVDI   +  RVL L  I      W+D DVLIFN+ HWW+H G  Q WDYI+
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIE 230

Query: 223 DGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRGKEW 282
            G T  +DMDRL A  K + TWA WVD NVD S+T+VFFQ ISPTHY           EW
Sbjct: 231 SGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYN--------PSEW 282

Query: 283 N----SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDA 338
           +    +  KNC GE  P+SG TYPG  P    VV++V+  ++ P YLLDIT LS+LRKD 
Sbjct: 283 SAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDG 342

Query: 339 HPSTYSGKHSGT---------DCSHWCLPGLPDTWNQLLYAAL 372
           HPS YSG  S +         DCSHWCLPGLPDTWNQL Y AL
Sbjct: 343 HPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 374
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.54
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 96.41
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 95.92
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 94.94
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 94.48
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 93.15
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 90.62
COG2845354 Uncharacterized protein conserved in bacteria [Fun 88.49
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 85.49
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=2.4e-111  Score=832.51  Aligned_cols=325  Identities=57%  Similarity=1.103  Sum_probs=299.8

Q ss_pred             CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCCCcccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017263           42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG  120 (374)
Q Consensus        42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~L~rfd~~~fl~~LrgK~i~FVG  120 (374)
                      ..++.||+|+|+||+|+++|+|++++|| ||++++||++|||||.+|++|||||++|+||||||.+||++||||+|+|||
T Consensus        48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG  127 (387)
T PLN02629         48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG  127 (387)
T ss_pred             CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence            4457899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHhhhccCCCCceeeeccCcceeEEeeecCeEEEEEecccccceecccccceEEeccccc-CCCCCccc
Q 017263          121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD  199 (374)
Q Consensus       121 DSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D  199 (374)
                      |||+|||||||+|||++++|........+++..+|+|++||+||+||||||||+.+.....++++||+++. ++.|+++|
T Consensus       128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D  207 (387)
T PLN02629        128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD  207 (387)
T ss_pred             cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence            99999999999999999888665444456778899999999999999999999987666567999999986 78899999


Q ss_pred             EEEEcccccccccCCCCCcceecCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCcccccccccccC
Q 017263          200 VLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTETRG  279 (374)
Q Consensus       200 vlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~t~Vf~Rt~sP~Hf~~~~~~~~~~  279 (374)
                      ||||||||||.+.+..++++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||        +|
T Consensus       208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hf--------e~  279 (387)
T PLN02629        208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHY--------NP  279 (387)
T ss_pred             EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccc--------cC
Confidence            9999999999999888889999999999999999999999999999999999988899999999999999        99


Q ss_pred             cccccC----CCCCCCCcccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccccccCCCCCCcCCC---------
Q 017263          280 KEWNSR----KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK---------  346 (374)
Q Consensus       280 g~W~~~----gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y~~~---------  346 (374)
                      |+||..    +|+|+++|+|+.+++++++...+++++++++++++.+|++||||+||++|||||||+|++.         
T Consensus       280 g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p  359 (387)
T PLN02629        280 SEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANP  359 (387)
T ss_pred             CCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCC
Confidence            999942    2479999999998888777777888999999999999999999999999999999999642         


Q ss_pred             CCCCCceeeccCCchhHHHHHHHHHHhC
Q 017263          347 HSGTDCSHWCLPGLPDTWNQLLYAALTM  374 (374)
Q Consensus       347 ~~~~DC~HwClPGv~D~WN~lL~~~L~~  374 (374)
                      ..++||+||||||||||||||||++|+.
T Consensus       360 ~~~~DC~HWCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        360 DRSADCSHWCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             CCCCCcccccCCCCCccHHHHHHHHHhC
Confidence            3468999999999999999999999974



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 96.88
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 93.59
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=96.88  E-value=0.00097  Score=58.46  Aligned_cols=92  Identities=12%  Similarity=0.108  Sum_probs=55.6

Q ss_pred             cccEEEEcccccccccCCCCCcceecCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCccccccccc
Q 017263          197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTFISLTE  276 (374)
Q Consensus       197 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~t~Vf~Rt~sP~Hf~~~~~~~  276 (374)
                      .+|+|||+.|..=..                    ...+.|++.++++.+-+.+.  .++++|++-+..|...       
T Consensus        74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~-------  124 (200)
T 4h08_A           74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT-------  124 (200)
T ss_dssp             CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE-------
T ss_pred             CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc-------
Confidence            389999999975211                    01457788888887776553  3567899999988654       


Q ss_pred             ccCcccccCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccc
Q 017263          277 TRGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQL  334 (374)
Q Consensus       277 ~~~g~W~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDit~ls~~  334 (374)
                       .  .+..    ...+..        ......+++++++.++  ..+.++|++..+.-
T Consensus       125 -~--~~~~----~~~~~~--------~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~  165 (200)
T 4h08_A          125 -G--EGMK----EFAPIT--------ERLNVRNQIALKHINR--ASIEVNDLWKVVID  165 (200)
T ss_dssp             -S--GGGC----EECTHH--------HHHHHHHHHHHHHHHH--TTCEEECHHHHHTT
T ss_pred             -c--cccc----ccchhH--------HHHHHHHHHHHHHhhh--cceEEEecHHhHhc
Confidence             1  1110    000000        0012345677777776  57899999876653



>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.86
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.1
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 83.88
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]
Probab=96.86  E-value=0.0013  Score=55.95  Aligned_cols=25  Identities=20%  Similarity=0.303  Sum_probs=18.8

Q ss_pred             hHHHHHHHHHhhCCCCeeEeecccccc
Q 017263          307 PAASVVNKVLSSINKPVYLLDITTLSQ  333 (374)
Q Consensus       307 ~~~~~v~~~~~~~~~~v~lLDit~ls~  333 (374)
                      ..+++++++.++  ..+.++|++.++.
T Consensus       137 ~~~~~~~~~a~~--~~v~~vD~~~~~~  161 (208)
T d2o14a2         137 WYRASILALAEE--EKTYLIDLNVLSS  161 (208)
T ss_dssp             TTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred             HHHHHHHHhhcc--CCcEEeccHHHHH
Confidence            356788888777  4688999987764



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure