Citrus Sinensis ID: 017265

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNSSISSSKASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTKQ
ccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEEEEccccccccccccEEEEccccccccccccccEEEEccccccccEEEccccccccccccccccEEEEccccEEEEccHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccEEEEEEccEEEEccccEEEEEcccEEEEEEEcccccccEEEEEEEEEEEEEEEccccEEEEEccccccc
cHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEccccccEEEEEEccccccEEcccccccHHHHHcccccccccccccEEEcccccHHHHHcccccccccccEEEEEEcccccccEEEEEEEEEEccccccccEcccEEEEEEccccccccccccEEEEcccccccccccccEEEEcccccccccccEEEEccccccccccHHHHHHHHHcHHHccccccccccccccEEEEccccccccEEEEEEccEEccccHcHEEEEEcccEEEEEEEcccccEEEEEcEEEccEEEEEEccccEEEEcccccccc
MATFLSCVFILFFLCFYvvspieaqtggfsvelihrdspkspfynssetpYQRLRDALTRSLNRLnhfnqnssissskasqadiipnnanYLIRIsigtppterlavadtgsdliwtqcepcppsqcymqdsplfdpkmsstykslpcsssqcaslnqkscsgvncqysvsygdgsfsngnlATETVTlgsttgqavalpgitfgcgtnngglfnskttgivglgggdISLISQMRTTiagnqrlgvstpdividsgttltflpqgynsNLLSVMSSMieaqpvadptgslelcysfnslsqvpevtihfrgadvklsrsnffvKVSEDIVCSVFKgitnsvpiygnimqtnflvgydieqqtvsfkptdctkq
MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDspkspfynssetpYQRLRDALTRSLNRLNHFnqnssissskasqadIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQtvsfkptdctkq
MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNssissskasQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTKQ
**TFLSCVFILFFLCFYVVSPIEAQTGGFSVELIH************************************************IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYM******************************SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTV**********
*ATFLSCVFILFFLCFYVVSPIEAQ**GFSVELIHRD************************************************PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQC*M****************LPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNN*****SKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDC***
MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQN*********QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSS******************SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSF********
MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNS***SSKASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD****
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNSSISSSKASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTKQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query374 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 no no 0.558 0.478 0.552 2e-56
Q3EBM5447 Probable aspartic proteas no no 0.609 0.510 0.476 4e-50
Q766C2438 Aspartic proteinase nepen N/A no 0.890 0.760 0.302 1e-41
Q766C3437 Aspartic proteinase nepen N/A no 0.537 0.459 0.416 2e-40
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.842 0.63 0.312 2e-36
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.478 0.380 0.352 4e-29
Q9S9K4475 Aspartic proteinase-like no no 0.812 0.64 0.242 2e-19
P69477178 Aspartic proteinase nepen N/A no 0.393 0.825 0.305 2e-15
Q9LZL3453 Aspartic proteinase PCS1 no no 0.331 0.273 0.369 1e-12
Q9LX20528 Aspartic proteinase-like no no 0.951 0.674 0.241 3e-11
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/217 (55%), Positives = 152/217 (70%), Gaps = 8/217 (3%)

Query: 28  GFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNSSISSSKASQADIIPN 87
           GF+ +LIHRDSPKSPFYN  ET  QRLR+A+ RS+NR+ HF +  +   +   Q D+  N
Sbjct: 30  GFTADLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEKDN---TPQPQIDLTSN 86

Query: 88  NANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLP 147
           +  YL+ +SIGTPP   +A+ADTGSDL+WTQC PC    CY Q  PLFDPK SSTYK + 
Sbjct: 87  SGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPC--DDCYTQVDPLFDPKTSSTYKDVS 144

Query: 148 CSSSQCASL-NQKSCSGVN--CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITF 204
           CSSSQC +L NQ SCS  +  C YS+SYGD S++ GN+A +T+TLGS+  + + L  I  
Sbjct: 145 CSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQLKNIII 204

Query: 205 GCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTIAG 241
           GCG NN G FN K +GIVGLGGG +SLI Q+  +I G
Sbjct: 205 GCGHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDG 241
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|P69477|NEP2_NEPDI Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
255566010439 Aspartic proteinase nepenthesin-1 precur 0.989 0.842 0.440 2e-89
297805038440 predicted protein [Arabidopsis lyrata su 0.917 0.779 0.474 1e-83
356546370434 PREDICTED: probable aspartic protease At 0.941 0.811 0.401 6e-81
297805036435 predicted protein [Arabidopsis lyrata su 0.967 0.832 0.445 6e-80
296085498 542 unnamed protein product [Vitis vinifera] 0.949 0.654 0.406 8e-79
356546372433 PREDICTED: probable aspartic protease At 0.954 0.824 0.414 6e-78
357492389434 Aspartic proteinase nepenthesin-1 [Medic 0.954 0.822 0.400 6e-78
357492401434 Aspartic proteinase nepenthesin-1 [Medic 0.981 0.845 0.389 4e-76
356555042431 PREDICTED: probable aspartic protease At 0.957 0.830 0.393 7e-73
357500973438 Aspartic proteinase nepenthesin-1 [Medic 0.967 0.826 0.370 2e-72
>gi|255566010|ref|XP_002523993.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223536720|gb|EEF38361.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  335 bits (860), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/443 (44%), Positives = 260/443 (58%), Gaps = 73/443 (16%)

Query: 1   MATFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTR 60
           MA  +S + I+  +    + PI+A   GF+VELI+RDSPKSPFYN  ETP QR+  A+ R
Sbjct: 1   MAASVSLLAIVTLIFSGTLVPIDAAKDGFTVELINRDSPKSPFYNPRETPTQRIVSAVRR 60

Query: 61  SLNRLNHFN--QNSSISSSKASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQ 118
           S++R++HF+  +NS I +  A Q+++I N   YL++ S+GTP  + LA+ADTGSDLIWTQ
Sbjct: 61  SMSRVHHFSPTKNSDIFTDTA-QSEMISNQGEYLMKFSLGTPAFDILAIADTGSDLIWTQ 119

Query: 119 CEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ-KSCSG---VNCQYSVSYGD 174
           C+PC   QCY QD+PLFDPK SSTY+ + CS+ QC  L +  SCSG     C YS SYGD
Sbjct: 120 CKPC--DQCYEQDAPLFDPKSSSTYRDISCSTKQCDLLKEGASCSGEGNKTCHYSYSYGD 177

Query: 175 GSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSK----------------- 217
            SF++GN+A +T+TLGST+G+ V LP    GCG NNGG F  K                 
Sbjct: 178 RSFTSGNVAADTITLGSTSGRPVLLPKAIIGCGHNNGGSFTEKGSGIVGLGGGPISLISQ 237

Query: 218 -----------------------------TTGIVGLGG-GDISLISQ---------MRTT 238
                                        + GIV  GG     LIS+         +   
Sbjct: 238 LGSTIDGKFSYCLVPLSSNATNSSKLNFGSNGIVSGGGVQSTPLISKDPDTFYFLTLEAV 297

Query: 239 IAGNQRL-------GVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSL 291
             G++R+       G S  +I+IDSGTTLT  P+ + S L S +   +   PV DP+G L
Sbjct: 298 SVGSERIKFPGSSFGTSEGNIIIDSGTTLTLFPEDFFSELSSAVQDAVAGTPVEDPSGIL 357

Query: 292 ELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQT 351
            LCYS ++  + P +T HF GADVKL+  N FV+VS+ ++C  F  I NS  I+GN+ Q 
Sbjct: 358 SLCYSIDADLKFPSITAHFDGADVKLNPLNTFVQVSDTVLCFAFNPI-NSGAIFGNLAQM 416

Query: 352 NFLVGYDIEQQTVSFKPTDCTKQ 374
           NFLVGYD+E +TVSFKPTDCT+ 
Sbjct: 417 NFLVGYDLEGKTVSFKPTDCTQD 439

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297805038|ref|XP_002870403.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316239|gb|EFH46662.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356546370|ref|XP_003541599.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|297805036|ref|XP_002870402.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316238|gb|EFH46661.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|296085498|emb|CBI29230.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356546372|ref|XP_003541600.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|357492389|ref|XP_003616483.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517818|gb|AES99441.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357492401|ref|XP_003616489.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517824|gb|AES99447.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356555042|ref|XP_003545848.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|357500973|ref|XP_003620775.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|357500991|ref|XP_003620784.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355495790|gb|AES76993.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355495799|gb|AES77002.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.606 0.510 0.464 5.8e-80
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.836 0.716 0.428 7.1e-61
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.860 0.747 0.408 5.1e-58
TAIR|locus:2057831396 AT2G28010 [Arabidopsis thalian 0.368 0.348 0.435 4.4e-56
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.839 0.702 0.393 2.1e-54
TAIR|locus:2046228395 AT2G28040 [Arabidopsis thalian 0.374 0.354 0.448 2.3e-53
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.550 0.446 0.367 6.9e-53
TAIR|locus:2046158392 AT2G28030 [Arabidopsis thalian 0.368 0.352 0.454 4.8e-52
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.385 0.288 0.490 4.2e-49
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.382 0.296 0.470 4.1e-45
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 552 (199.4 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
 Identities = 112/241 (46%), Positives = 148/241 (61%)

Query:     3 TFLSCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSL 62
             TFL C   L  + F+  S   A     +VELIHRDSP SP YN   T   RL  A  RS+
Sbjct:     5 TFLYCS--LLAISFFFASNSSANRENLTVELIHRDSPHSPLYNPHHTVSDRLNAAFLRSI 62

Query:    63 NRLNHFNQNXXXXXXXXXQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPC 122
             +R   F            Q+ +I N   Y + ISIGTPP++  A+ADTGSDL W QC+PC
Sbjct:    63 SRSRRFTTKTDL------QSGLISNGGEYFMSISIGTPPSKVFAIADTGSDLTWVQCKPC 116

Query:   123 PPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ--KSCSGVN--CQYSVSYGDGSFS 178
                QCY Q+SPLFD K SSTYK+  C S  C +L++  + C      C+Y  SYGD SF+
Sbjct:   117 --QQCYKQNSPLFDKKKSSTYKTESCDSKTCQALSEHEEGCDESKDICKYRYSYGDNSFT 174

Query:   179 NGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTT 238
              G++ATET+++ S++G +V+ PG  FGCG NNGG F    +GI+GLGGG +SL+SQ+ ++
Sbjct:   175 KGDVATETISIDSSSGSSVSFPGTVFGCGYNNGGTFEETGSGIIGLGGGPLSLVSQLGSS 234

Query:   239 I 239
             I
Sbjct:   235 I 235
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057831 AT2G28010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046228 AT2G28040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046158 AT2G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
Al_scaffold_0007_3076
annotation not avaliable (440 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-147
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-51
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 4e-41
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 3e-25
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 5e-18
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-16
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 6e-15
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 6e-13
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 6e-11
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 3e-10
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 4e-10
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 8e-09
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 7e-08
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 1e-07
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 6e-07
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 2e-06
cd05487326 cd05487, renin_like, Renin stimulates production o 8e-06
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 1e-05
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-05
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-05
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  422 bits (1086), Expect = e-147
 Identities = 213/436 (48%), Positives = 257/436 (58%), Gaps = 73/436 (16%)

Query: 6   SCVFILFFLCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRL 65
           S +  L    F  +S  EA  GGF+V+LIHRDSPKSPFYN SETP QRLR+A  RS++R+
Sbjct: 2   SVLLALCLFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRV 61

Query: 66  NHFNQNSSISSSKASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPS 125
           NHF    +  S    Q+D+I N   YL+ ISIGTPP   LA+ADTGSDLIWTQC+PC   
Sbjct: 62  NHFRPTDA--SPNDPQSDLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCD-- 117

Query: 126 QCYMQDSPLFDPKMSSTYKSLPCSSSQCASL-NQKSCSGVN-CQYSVSYGDGSFSNGNLA 183
            CY Q SPLFDPK SSTYK + C SSQC +L NQ SCS  N C YS SYGDGSF+ GNLA
Sbjct: 118 DCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGNLA 177

Query: 184 TETVTLGSTTGQAVALPGITFGCGTNN-----------------------------GGLF 214
            ET+T+GST+G+ V+ PGI FGCG NN                             GG F
Sbjct: 178 VETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKF 237

Query: 215 -----------------NSKTTGIVGLGGGDIS--LISQMRTTI---------AGNQRL- 245
                            N  T  IV  G G +S  L+S+   T           G+++L 
Sbjct: 238 SYCLVPLSSDSNGTSKINFGTNAIVS-GSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLP 296

Query: 246 -------GVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFN 298
                  GV   +I+IDSGTTLT LP  + S L S +   I  + V+DP G L LCYS  
Sbjct: 297 YTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSST 356

Query: 299 SLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYD 358
           S  ++P +T HF GADVKL   N FVKVSED+VC      T+S+ I+GN+ Q NFLVGYD
Sbjct: 357 SDIKLPIITAHFTGADVKLQPLNTFVKVSEDLVCFAMIP-TSSIAIFGNLAQMNFLVGYD 415

Query: 359 IEQQTVSFKPTDCTKQ 374
           +E +TVSFKPTDCTK 
Sbjct: 416 LESKTVSFKPTDCTKM 431

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 374
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.94
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.92
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.87
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.22
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.06
PF1365090 Asp_protease_2: Aspartyl protease 96.81
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.57
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.04
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.49
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.28
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 91.93
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 91.24
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 87.6
COG3577215 Predicted aspartyl protease [General function pred 87.11
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 86.91
PF02160201 Peptidase_A3: Cauliflower mosaic virus peptidase ( 85.51
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 83.38
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 82.3
cd0548287 HIV_retropepsin_like Retropepsins, pepsin-like asp 80.23
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-65  Score=499.80  Aligned_cols=356  Identities=59%  Similarity=1.011  Sum_probs=295.1

Q ss_pred             HHHhhccccccCCCceEEEEeccCCCCCCCCCCCCChhHHHHHHHhhhHhhhhccccccccCCCCCcccccccCCccEEE
Q 017265           14 LCFYVVSPIEAQTGGFSVELIHRDSPKSPFYNSSETPYQRLRDALTRSLNRLNHFNQNSSISSSKASQADIIPNNANYLI   93 (374)
Q Consensus        14 ~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~   93 (374)
                      +.++++++...+.++++++|+||+++++|+++++.+..++++++++|+.+|++++.++...  ...+..+....+++|++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Y~v   87 (431)
T PLN03146         10 FSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDAS--PNDPQSDLISNGGEYLM   87 (431)
T ss_pred             HHHhhhhhccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhcccc--CCccccCcccCCccEEE
Confidence            4555566666678899999999999999988888888899999999999999888543222  12344455667889999


Q ss_pred             EEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC-CCCCC-cceeeEe
Q 017265           94 RISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK-SCSGV-NCQYSVS  171 (374)
Q Consensus        94 ~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~-~C~~~-~~~~~~~  171 (374)
                      +|.||||||++.|++||||+++||+|.+|.  .|..+.++.|||++|+||+.++|+++.|...+.. .|..+ .|.|.+.
T Consensus        88 ~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~--~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~  165 (431)
T PLN03146         88 NISIGTPPVPILAIADTGSDLIWTQCKPCD--DCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYS  165 (431)
T ss_pred             EEEcCCCCceEEEEECCCCCcceEcCCCCc--ccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEE
Confidence            999999999999999999999999999998  9988889999999999999999999999877654 47554 6999999


Q ss_pred             eCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcchhhHHhhhhc------------
Q 017265          172 YGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISLISQMRTTI------------  239 (374)
Q Consensus       172 Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s~~~ql~~~~------------  239 (374)
                      |+||+.+.|.+++|+|+|++..+..+.++++.|||++...+.|....+||||||++..|+++||...+            
T Consensus       166 Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~  245 (431)
T PLN03146        166 YGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLS  245 (431)
T ss_pred             eCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCC
Confidence            99999878999999999998544445789999999998877663468999999999999999975321            


Q ss_pred             -----------CCc--------------e-------------------ec--------CCCCCcEEEeccccccccCHhH
Q 017265          240 -----------AGN--------------Q-------------------RL--------GVSTPDIVIDSGTTLTFLPQGY  267 (374)
Q Consensus       240 -----------~~~--------------k-------------------~~--------~~~~~~~iiDSGtt~~~lp~~~  267 (374)
                                 |+.              +                   +.        ..+.+++||||||++++||+++
T Consensus       246 ~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~  325 (431)
T PLN03146        246 SDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDF  325 (431)
T ss_pred             CCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCccceecCHHH
Confidence                       110              0                   00        0112579999999999999999


Q ss_pred             HHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEEEEcCCCCcceech
Q 017265          268 NSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGN  347 (374)
Q Consensus       268 ~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~i~~~~~~~~ilG~  347 (374)
                      |++|.++|.+.++..........+++|+.......+|+|+|+|+|+++.|++++|+++..++..|+++... .+.||||+
T Consensus       326 y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~F~Ga~~~l~~~~~~~~~~~~~~Cl~~~~~-~~~~IlG~  404 (431)
T PLN03146        326 YSELESAVEEAIGGERVSDPQGLLSLCYSSTSDIKLPIITAHFTGADVKLQPLNTFVKVSEDLVCFAMIPT-SSIAIFGN  404 (431)
T ss_pred             HHHHHHHHHHHhccccCCCCCCCCCccccCCCCCCCCeEEEEECCCeeecCcceeEEEcCCCcEEEEEecC-CCceEECe
Confidence            99999999998865443333334667997543347899999999999999999999988777899997765 45799999


Q ss_pred             hhhcceEEEEECCCCEEEEecCCCCCC
Q 017265          348 IMQTNFLVGYDIEQQTVSFKPTDCTKQ  374 (374)
Q Consensus       348 ~fl~~~y~vfD~~~~riGfa~~~C~~~  374 (374)
                      .|||++|+|||++++|||||+.+|+++
T Consensus       405 ~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        405 LAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             eeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            999999999999999999999999975

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF02160 Peptidase_A3: Cauliflower mosaic virus peptidase (A3); InterPro: IPR000588 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05482 HIV_retropepsin_like Retropepsins, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 9e-09
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 2e-08
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 2e-08
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 7e-06
1qdm_A 478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 1e-05
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 1e-05
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 1e-05
1htr_B329 Crystal And Molecular Structures Of Human Progastri 2e-05
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 1e-04
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 2e-04
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 2e-04
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 3e-04
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 6e-04
3vla_A413 Crystal Structure Of Edgp Length = 413 7e-04
1j71_A334 Structure Of The Extracellular Aspartic Proteinase 8e-04
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure 
Iteration: 1

 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 93/343 (27%)
Query: 88  NANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLP 147
           NA Y   I++GTPP     + DTGS  +W     C    C++     +D + SS+YK+  
Sbjct: 12  NAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSK--YDHEASSSYKA-- 67
Query: 148 CSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTT------GQAVALPG 201
                              ++++ YG GS   G ++ +T+++G  T       +A + PG
Sbjct: 68  ----------------NGTEFAIQYGTGSLE-GYISQDTLSIGDLTIPKQDFAEATSEPG 110
Query: 202 ITFGCGTNNGGL----------------FN-------------------SKTT---GIVG 223
           +TF  G  +G L                +N                   SK T   G   
Sbjct: 111 LTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEAT 170
Query: 224 LGG-------GDISLISQMRTTIA---------GNQRLGVSTPDIVIDSGTTLTFLPQGY 267
            GG       GDI+ +   R             G++   + +    ID+GT+L  LP G 
Sbjct: 171 FGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG- 229
Query: 268 NSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS 327
                  ++ MI A+  A    + +     N+   +P++  +F G +  +   ++ ++VS
Sbjct: 230 -------LAEMINAEIGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS 282
Query: 328 EDIVCSV----FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSF 366
              + ++    F      + I G+     +   YDI    V  
Sbjct: 283 GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDIGNNAVGL 325
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-39
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-23
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 2e-34
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 1e-33
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-18
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-21
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-19
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 8e-19
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-18
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 7e-18
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 3e-17
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-17
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 9e-17
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 1e-16
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-16
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 3e-16
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-16
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-16
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-15
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-15
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 7e-15
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-14
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-14
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-14
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 4e-14
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-14
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 6e-14
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 9e-14
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-13
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-13
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 2e-12
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 8e-12
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-11
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-10
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-09
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  143 bits (362), Expect = 2e-39
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 18/201 (8%)

Query: 74  ISSSKASQADIIP-----NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCY 128
           ++ +K     ++P     +   +   +   TP  +   + D   + +W  CE        
Sbjct: 1   VTPTKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ--YSSK 58

Query: 129 MQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNCQ-YSVSYGDGSFSNGNLATETV 187
              +P       S   +  C S   AS  +  C    C   S +        G L  + +
Sbjct: 59  TYQAPFCHSTQCSRANTHQCLSCPAAS--RPGCHKNTCGLMSTNPITQQTGLGELGEDVL 116

Query: 188 TLGSTTGQA------VALPGITFGCGTNNGGL--FNSKTTGIVGLGGGDISLISQMRTTI 239
            + +T G        V +P   F C  +          T G+ GLG   ISL +Q+ +  
Sbjct: 117 AIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHF 176

Query: 240 AGNQRLGVSTPDIVIDSGTTL 260
              ++            G  +
Sbjct: 177 GLQRQFTTCLSRYPTSKGAII 197
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.97
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.94
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.9
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.76
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.14
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 91.49
2hs1_A99 HIV-1 protease; ultra-high resolution active site 88.41
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 88.19
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 85.99
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 85.28
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 83.56
2hah_A116 Protease, retropepsin; retroviral, aspartyl, hydro 81.62
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=6.1e-51  Score=390.24  Aligned_cols=255  Identities=25%  Similarity=0.443  Sum_probs=209.2

Q ss_pred             cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265           80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK  159 (374)
Q Consensus        80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~  159 (374)
                      ..++.++.|.+|+++|.||||||++.|+|||||+++||+|..|....|  ..++.|||++|+||+..+            
T Consensus        47 ~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~------------  112 (370)
T 3psg_A           47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS------------  112 (370)
T ss_dssp             CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE------------
T ss_pred             eecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC------------
Confidence            456667899999999999999999999999999999999999984445  678999999999999987            


Q ss_pred             CCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------h
Q 017265          160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------L  231 (374)
Q Consensus       160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~  231 (374)
                            +.|.+.|++|+. +|.+++|+|+|++.     .++++.|||++...+. + ...+|||||||++.++      +
T Consensus       113 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~  180 (370)
T 3psg_A          113 ------QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV  180 (370)
T ss_dssp             ------EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred             ------cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCH
Confidence                  999999999995 59999999999986     8999999999988763 4 5678999999998765      3


Q ss_pred             hHHhhhh-----------------------cCCc----------------------e-----e-----cCCCCCcEEEec
Q 017265          232 ISQMRTT-----------------------IAGN----------------------Q-----R-----LGVSTPDIVIDS  256 (374)
Q Consensus       232 ~~ql~~~-----------------------~~~~----------------------k-----~-----~~~~~~~~iiDS  256 (374)
                      +.+|..+                       ||+.                      +     .     .......+||||
T Consensus       181 ~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiDT  260 (370)
T 3psg_A          181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDT  260 (370)
T ss_dssp             HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECT
T ss_pred             HHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCCCceEEEcC
Confidence            3343321                       2221                      0     0     112456899999


Q ss_pred             cccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-E
Q 017265          257 GTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-F  335 (374)
Q Consensus       257 Gtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i  335 (374)
                      ||+++++|++++++|.+++.+.    ....+.+.+ +|+...   .+|+|+|+|+|++++||+++|+++ . +..|+. |
T Consensus       261 GTs~~~lP~~~~~~i~~~i~a~----~~~~g~~~v-~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~-~~~C~~~~  330 (370)
T 3psg_A          261 GTSLLTGPTSAIANIQSDIGAS----ENSDGEMVI-SCSSID---SLPDIVFTIDGVQYPLSPSAYILQ-D-DDSCTSGF  330 (370)
T ss_dssp             TCCSEEEEHHHHHHHHHHTTCE----ECTTCCEEC-CGGGGG---GCCCEEEEETTEEEEECHHHHEEE-C-SSCEEESE
T ss_pred             CCCcEECCHHHHHHHHHHhCCc----ccCCCcEEE-ECCCcc---cCCcEEEEECCEEEEECHHHhccc-C-CCEEEEEE
Confidence            9999999999999998777543    222344444 598765   789999999999999999999998 3 346998 8


Q ss_pred             EcCC-----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265          336 KGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD  370 (374)
Q Consensus       336 ~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~  370 (374)
                      +..+     +..||||++|||++|+|||++++|||||+++
T Consensus       331 ~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          331 EGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             EEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence            7632     2369999999999999999999999999974
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 374
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 5e-25
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 6e-24
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-23
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-23
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 8e-23
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-22
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-22
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-22
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 6e-22
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-21
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 2e-20
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 5e-20
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 7e-20
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-19
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 3e-19
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-18
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 7e-18
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 5e-17
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 7e-17
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 2e-16
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-16
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 7e-13
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]

 Score =  101 bits (253), Expect = 5e-25
 Identities = 68/345 (19%), Positives = 122/345 (35%), Gaps = 93/345 (26%)

Query: 88  NANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLP 147
           NA Y   I++GTPP     + DTGS  +W     C    C++     +D + SS+YK+  
Sbjct: 12  NAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH--SKYDHEASSSYKAN- 68

Query: 148 CSSSQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTT------GQAVALPG 201
                              ++++ YG GS   G ++ +T+++G  T       +A + PG
Sbjct: 69  -----------------GTEFAIQYGTGSLE-GYISQDTLSIGDLTIPKQDFAEATSEPG 110

Query: 202 ITFGCGTNNGGLF--------------------------------------NSKTTGIVG 223
           +TF  G  +G L                                       +++  G   
Sbjct: 111 LTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEAT 170

Query: 224 LGGGDISLISQMRTTIA----------------GNQRLGVSTPDIVIDSGTTLTFLPQGY 267
            GG D S      T +                 G++   + +    ID+GT+L  LP G 
Sbjct: 171 FGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG- 229

Query: 268 NSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS 327
                  ++ MI A+  A    + +     N+   +P++  +F G +  +   ++ ++VS
Sbjct: 230 -------LAEMINAEIGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS 282

Query: 328 ED----IVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKP 368
                 I    F      + I G+     +   YD+    V    
Sbjct: 283 GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAK 327
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 85.06
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 84.62
d3ecga199 Human immunodeficiency virus type 2 (HIV-2) protea 83.78
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 83.32
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.4e-49  Score=379.33  Aligned_cols=254  Identities=24%  Similarity=0.428  Sum_probs=208.2

Q ss_pred             ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265           81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS  160 (374)
Q Consensus        81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~  160 (374)
                      .++.++.|.+|+++|.||||||++.|+|||||+++||+|..|.  .|..+.++.|||++|+||+..+             
T Consensus        48 ~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~--~~~~~~~~~yd~~~Sst~~~~~-------------  112 (370)
T d3psga_          48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS--SLACSDHNQFNPDDSSTFEATS-------------  112 (370)
T ss_dssp             CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC--SGGGTTSCCBCGGGCTTCEEEE-------------
T ss_pred             cccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCC--CcccccccccCCCcccccccCC-------------
Confidence            4555678899999999999999999999999999999999999  8877889999999999999987             


Q ss_pred             CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcch------hh
Q 017265          161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------LI  232 (374)
Q Consensus       161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s------~~  232 (374)
                           |.|.+.|++|+.. |.++.|++.+++.     +++++.||++....+.+  ....+||+|||++..+      ++
T Consensus       113 -----~~~~~~Yg~Gs~~-G~~~~d~~~~~~~-----~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~  181 (370)
T d3psga_         113 -----QELSITYGTGSMT-GILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVF  181 (370)
T ss_dssp             -----EEEEEESSSCEEE-EEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHH
T ss_pred             -----CcEEEEeCCceEE-EEEEEEEEeeece-----eeeeeEEEEEeeccCceecccccccccccccCcccccCCCchh
Confidence                 9999999999876 9999999999997     89999999999887754  5678999999987654      33


Q ss_pred             HHhhhh-----------------------cCCc--------------------------------eecCCCCCcEEEecc
Q 017265          233 SQMRTT-----------------------IAGN--------------------------------QRLGVSTPDIVIDSG  257 (374)
Q Consensus       233 ~ql~~~-----------------------~~~~--------------------------------k~~~~~~~~~iiDSG  257 (374)
                      .++..+                       +|+.                                .........+|||||
T Consensus       182 ~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~i~v~g~~~~~~~~~~aiiDSG  261 (370)
T d3psga_         182 DNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTG  261 (370)
T ss_dssp             HHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECTT
T ss_pred             hhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeecccceEEEEEeeEEeCCeEEecCCCccEEEecC
Confidence            333221                       2221                                001234568999999


Q ss_pred             ccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EE
Q 017265          258 TTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FK  336 (374)
Q Consensus       258 tt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~  336 (374)
                      |+++++|++++++|+++|....    ...+.+.+ +|+...   .+|+|+|+|+|++|.|++++|+++.++  .|+. |.
T Consensus       262 Ts~~~lp~~~~~~i~~~l~~~~----~~~~~~~~-~C~~~~---~~P~l~f~f~g~~~~l~~~~yi~~~~~--~c~~~~~  331 (370)
T d3psga_         262 TSLLTGPTSAIANIQSDIGASE----NSDGEMVI-SCSSID---SLPDIVFTIDGVQYPLSPSAYILQDDD--SCTSGFE  331 (370)
T ss_dssp             CCSEEEEHHHHHHHHHHTTCEE----CTTCCEEC-CGGGGG---GCCCEEEEETTEEEEECHHHHEEECSS--CEEESEE
T ss_pred             CceEeCCHHHHHHHHHHhCCee----ecCCcEEE-eccccC---CCceEEEEECCEEEEEChHHeEEEcCC--eEEEEEE
Confidence            9999999999999988776543    22333434 598765   789999999999999999999997543  4765 65


Q ss_pred             cCC-----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265          337 GIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD  370 (374)
Q Consensus       337 ~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~  370 (374)
                      ...     ++.||||++|||++|+|||++++||||||+.
T Consensus       332 ~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         332 GMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             EECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            322     4579999999999999999999999999973
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure