Citrus Sinensis ID: 017284
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 374 | 2.2.26 [Sep-21-2011] | |||||||
| Q949Y3 | 475 | Bifunctional purple acid | yes | no | 0.954 | 0.751 | 0.733 | 1e-160 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.951 | 0.740 | 0.686 | 1e-145 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.941 | 0.756 | 0.580 | 1e-120 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.938 | 0.748 | 0.592 | 1e-120 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.943 | 0.754 | 0.578 | 1e-117 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.917 | 0.739 | 0.590 | 1e-117 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.962 | 0.761 | 0.557 | 1e-116 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.949 | 0.761 | 0.566 | 1e-114 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.925 | 0.742 | 0.573 | 1e-113 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.887 | 0.768 | 0.573 | 1e-109 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/357 (73%), Positives = 308/357 (86%)
Query: 11 LFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGD 70
L I ++L+ +L L G + ITS FIR+EWP+ DIPL + VF +PKG+NAPQQV ITQGD
Sbjct: 4 LVIISVFLSSVLLLYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGD 63
Query: 71 YDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130
YDGKAVIISWVTP+E GS++V YG ++ KY+ A+GT NYTFYKYKSG+IHHCLV DLE
Sbjct: 64 YDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLE 123
Query: 131 YDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190
+DTKYYYKI G+SSREFWF TPP +HPDA Y FGIIGD+GQT+NSLSTL+HYM+SG Q+
Sbjct: 124 HDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESGAQA 183
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
VLFLGDLSYADRY+YNDVG+RWDSWGRF+E+S AYQPW+WSAGNHE+++MP MGEV PF+
Sbjct: 184 VLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFR 243
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREK 310
+YL R TPY ASKS++PLWYA+RRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREK
Sbjct: 244 NYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREK 303
Query: 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
TPWLIVLMHVP+Y+SN H+MEGESMRA FE WFV +VD IFAGHVHAYERS R+S
Sbjct: 304 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRIS 360
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Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/357 (68%), Positives = 293/357 (82%), Gaps = 1/357 (0%)
Query: 11 LFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGD 70
+ ++ ++ LL S++ R TS F+R+E+P+ DIP+ +K F +PK +PQQV ITQGD
Sbjct: 10 FYLLLFHIILLCSVDKTLCRQTSSFVRSEFPAVDIPIDSKEFAVPKNQFSPQQVHITQGD 69
Query: 71 YDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130
YDGKAVI+SWVT + G + V YG YD SA+G TNYT+Y Y SGYIHHCL+D LE
Sbjct: 70 YDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTYYDYTSGYIHHCLLDKLE 129
Query: 131 YDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190
YDTKYYYKIG GD++REFWF TPP+IHPDA YTFGIIGDLGQTYNSLSTL+HYM+S GQ+
Sbjct: 130 YDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQTYNSLSTLEHYMKSKGQT 189
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
VLF+GDLSYADRY N+ G RWDSWGRF+E+S AYQPWIW+ GNHEIE+ P++GEV PF+
Sbjct: 190 VLFVGDLSYADRYSCNN-GTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPDLGEVFPFR 248
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREK 310
+YL+R TP+ AS S++PLWY+IRRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREK
Sbjct: 249 AYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTPQWLWLSEELTRVDREK 308
Query: 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
TPWLIVLMH PLY+SN HYMEGESMR FESWFV +VD +FAGHVHAYERS R+S
Sbjct: 309 TPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFAGHVHAYERSYRIS 365
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Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/355 (58%), Positives = 264/355 (74%), Gaps = 3/355 (0%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
+L + L +N A ITS FIR + D+PL + VF +P G+NAPQQV ITQGD+ GK
Sbjct: 10 LLAVVLAAVMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGK 69
Query: 75 AVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134
A+I+SWVT +E GS++V Y ++ A G + YT++ Y SGYIHHC + +LEY+TK
Sbjct: 70 AMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTK 129
Query: 135 YYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVL 192
YYY++G G+++R FWF TPP++ PD PYTFG+IGDLGQ+++S TL HY ++ GQ+VL
Sbjct: 130 YYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVL 189
Query: 193 FLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSY 252
F+GDLSYAD Y +D +RWD+WGRF+E+S AYQPWIW+AGNHEI+F P +GE PFK +
Sbjct: 190 FVGDLSYADNYPNHD-NVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPF 248
Query: 253 LHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312
R PY AS ST WY I+RASA+IIVLSSYS Y KYTPQ+ WL EEL KV+R +TP
Sbjct: 249 TKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETP 308
Query: 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
WLIVLMH P Y+S HYMEGE+MR ++E WFV +VD +FAGHVHAYERS R+S
Sbjct: 309 WLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVS 363
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Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/356 (59%), Positives = 268/356 (75%), Gaps = 5/356 (1%)
Query: 14 IMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDG 73
I+ L++L+ G TS ++R D+PL + VF++P G N+PQQV +TQG+++G
Sbjct: 15 IIFLLSVLVEFCYGG--FTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHEG 72
Query: 74 KAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133
VIISWVTP + GS VQY +K AE TV Y F+ Y SGYIHHCL+DDLE+DT
Sbjct: 73 NGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDT 132
Query: 134 KYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHY-MQSG-GQSV 191
KYYY+IG G SR FWF PPK PD PYTFG+IGDLGQTY+S STL HY M G GQ+V
Sbjct: 133 KYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAV 192
Query: 192 LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKS 251
LF+GDLSYADRY +D RWD+WGRF+E+S AYQPWIW+AGNHEI+F+P++GE+ PFK
Sbjct: 193 LFVGDLSYADRYPNHDNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKP 251
Query: 252 YLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311
+++R TP+ AS S +PLWY+I+RASA+IIV+S YS Y YTPQ+ WL +EL+ V+R +T
Sbjct: 252 FMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTET 311
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
PWLIVL+H P YSS V HYMEGE++R ++E WFV +VD +FAGHVHAYERS R+S
Sbjct: 312 PWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVS 367
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/356 (57%), Positives = 256/356 (71%), Gaps = 3/356 (0%)
Query: 14 IMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDG 73
I+L L +L+ ITSR++R + D+PL + VF +P G+NAPQQV ITQGD +G
Sbjct: 12 IVLVLCCVLNSLLCNGGITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEG 71
Query: 74 KAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133
KAVI+SWVT GSN+V Y K A G Y FY Y SG+IHHC + +LEYDT
Sbjct: 72 KAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYDT 131
Query: 134 KYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ--SGGQSV 191
KYYY +G G + R+FWF TPP+I PD PYTFG+IGDLGQ+Y+S TL HY + GQ+V
Sbjct: 132 KYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAV 191
Query: 192 LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKS 251
LF+GD+SYAD Y +D RWDSWGRF E+S AYQPWIW+ GNHE++F P +GE PFK
Sbjct: 192 LFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKP 250
Query: 252 YLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311
+ HR TPY +S ST P WY+I+R A+IIVL+SYS Y KYTPQ+ WL EE KV+R +T
Sbjct: 251 FTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTET 310
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
PWLIVLMH P Y+S HYMEGE+MR ++E+WFV +VD +FAGHVHAYERS R+S
Sbjct: 311 PWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVS 366
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/349 (59%), Positives = 257/349 (73%), Gaps = 6/349 (1%)
Query: 21 LLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISW 80
+ N G+ +S FIR + D+PL + VF +P G+NAPQQV ITQGD GKAVI+SW
Sbjct: 17 CVMCNGGS---SSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSW 73
Query: 81 VTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140
VT +E GS+ V Y AEG + Y F+ Y SG+IHH + +LEY TKYYY++G
Sbjct: 74 VTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVG 133
Query: 141 DGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLS 198
G+++R+FWF TPP+I PD PYTFG+IGDLGQ+++S TL HY + GQ+VLF+GDLS
Sbjct: 134 LGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLS 193
Query: 199 YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258
YAD Y +D IRWDSWGRF E+S AYQPWIW+AGNHE F P +GE +PFK Y HR
Sbjct: 194 YADNYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHV 252
Query: 259 PYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318
PY AS+ST+P WY+I+RASAHIIVL+SYS Y KYTPQ+ WL +EL KV+R +TPWLIVLM
Sbjct: 253 PYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLM 312
Query: 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
H P Y+S HYMEGE+MR ++E WFV +VD +FAGHVHAYERS R+S
Sbjct: 313 HSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVS 361
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Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 274/371 (73%), Gaps = 11/371 (2%)
Query: 7 KLVPLFQIMLYLTLLLSLNN-GTARITSRFIR---TEWPSA---DIPLHNKVFDIPKGHN 59
+LV + L L L+L+ A +TS ++R + P+A D+P + VF +P G+N
Sbjct: 2 RLVVVGLWCLILGLILNPTKFCDAGVTSSYVRKSLSALPNAEDVDMPWDSDVFAVPSGYN 61
Query: 60 APQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKS 118
APQQV ITQGDY+G+ VIISW TP ++ G+N+V Y K A GTV Y +Y Y S
Sbjct: 62 APQQVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNYTS 121
Query: 119 GYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLS 178
+IHHC + DLEYDTKYYY++G GD+ R+FWF TPPK PD PY FG+IGD+GQT++S +
Sbjct: 122 AFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNT 181
Query: 179 TLKHYMQSG--GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236
TL HY Q+ GQ+VLF+GDLSY++R+ +D RWD+WGRF E+S AYQPWIW+AGNHE
Sbjct: 182 TLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNN-RWDTWGRFSERSVAYQPWIWTAGNHE 240
Query: 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQW 296
I++ P++GE PF + +R TP+ AS S +PLWYAI+RASAHIIVLSSYS +VKY+PQ+
Sbjct: 241 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQY 300
Query: 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGH 356
W EL+KV+R +TPWLIVL+H PLY+S HYMEGE+MRA+FE +FV+ +VD +F+GH
Sbjct: 301 KWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGH 360
Query: 357 VHAYERSVRMS 367
VH+YERS R+S
Sbjct: 361 VHSYERSERVS 371
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/367 (56%), Positives = 266/367 (72%), Gaps = 12/367 (3%)
Query: 7 KLVPLFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRI 66
++ + + ++L++ +N+GT TS F+RT PS ++ L + F P GHNAP+QV I
Sbjct: 2 RMNKILLVFVFLSIATVINSGT---TSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHI 56
Query: 67 TQGDYDGKAVIISWVTP-NELGSNRVQYGKLE----KKYDSSAEGTVTNYTFYKYKSGYI 121
QGDY+G+ +IISWVTP N GSN V Y K K + ++Y FY Y SG++
Sbjct: 57 VQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFL 116
Query: 122 HHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLK 181
HH + LEYDTKY Y++G S R+F F +PPK+ PD PYTFGIIGDLGQT S TL
Sbjct: 117 HHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLY 176
Query: 182 HYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240
HYM + GQ+VLF GDLSYAD + +D +WDSWGRF+E AAYQ +I++AGNHEI+F+
Sbjct: 177 HYMSNPKGQAVLFPGDLSYADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFV 235
Query: 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLR 300
PN+GE FK Y+HR Y ASKS +PLWY+IRRASAHIIVLSSYS Y KYTPQ+ WL
Sbjct: 236 PNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLE 295
Query: 301 EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360
+ELKKV+RE+TPWLIV++H P Y+SN HYMEGESMRA+FESWFV+S+VD + +GHVH+Y
Sbjct: 296 QELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSY 355
Query: 361 ERSVRMS 367
ERS R+S
Sbjct: 356 ERSERVS 362
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/359 (57%), Positives = 259/359 (72%), Gaps = 13/359 (3%)
Query: 16 LYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKA 75
L+L++ +N G ITS+F+R PS ++ L F P G+N P+QV +TQGD+DG+
Sbjct: 10 LFLSITTVINGG---ITSKFVRQALPSIEMSL--DTFPSPGGYNTPEQVHLTQGDHDGRG 64
Query: 76 VIISWVTP-NELGSNRVQY-----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
+I+SWVTP N GSN V Y G K A + +Y FY Y SG++HH + L
Sbjct: 65 MIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGL 124
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS-GG 188
EYDTKY Y++G S R+F F TPPKI PD PYTFGIIGDLGQTY S TL HYM + G
Sbjct: 125 EYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKG 184
Query: 189 QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIP 248
Q+VLF GDLSYAD + +D +WD+WGRF+E AAYQP+I++AGNHEI+F+PN+GE
Sbjct: 185 QAVLFAGDLSYADDHPNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHA 243
Query: 249 FKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDR 308
FK Y HR Y AS+ST+PLWY++RRASAHIIVLSSYS Y KYTPQ+ WL +ELK V+R
Sbjct: 244 FKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNR 303
Query: 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
E+TPWLIV++H P Y+SN HYMEGESMR +FESW V+S+VD + +GHVHAYERS R+S
Sbjct: 304 EETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 251/335 (74%), Gaps = 3/335 (0%)
Query: 35 FIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYG 94
F+R + D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y
Sbjct: 1 FVRKTNKNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYW 60
Query: 95 KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
+ A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 61 SEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 120
Query: 155 KIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRW 212
+ D PYTFG+IGDLGQ+++S +TL HY S GQ+VLF+GDLSYADRY +D +RW
Sbjct: 121 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 179
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA 272
D+WGRF E+S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+
Sbjct: 180 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 239
Query: 273 IRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332
I+RASAHIIVLSS+ Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+ME
Sbjct: 240 IKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 299
Query: 333 GESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
GE+MR FE+WFV +VD +FAGHVHAYERS R+S
Sbjct: 300 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 334
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 374 | ||||||
| 224143192 | 478 | predicted protein [Populus trichocarpa] | 0.954 | 0.746 | 0.818 | 1e-174 | |
| 255548858 | 469 | Iron(III)-zinc(II) purple acid phosphata | 0.954 | 0.761 | 0.815 | 1e-174 | |
| 296082127 | 484 | unnamed protein product [Vitis vinifera] | 0.981 | 0.758 | 0.782 | 1e-173 | |
| 359476175 | 488 | PREDICTED: bifunctional purple acid phos | 0.901 | 0.690 | 0.830 | 1e-168 | |
| 224120334 | 483 | predicted protein [Populus trichocarpa] | 0.954 | 0.739 | 0.779 | 1e-167 | |
| 225446227 | 487 | PREDICTED: bifunctional purple acid phos | 0.943 | 0.724 | 0.767 | 1e-166 | |
| 147771668 | 465 | hypothetical protein VITISV_030234 [Viti | 0.943 | 0.759 | 0.764 | 1e-165 | |
| 296084523 | 462 | unnamed protein product [Vitis vinifera] | 0.927 | 0.751 | 0.780 | 1e-165 | |
| 255579857 | 488 | Iron(III)-zinc(II) purple acid phosphata | 0.967 | 0.741 | 0.754 | 1e-163 | |
| 357601492 | 476 | PAP26 [Gossypium hirsutum] | 0.954 | 0.75 | 0.765 | 1e-163 |
| >gi|224143192|ref|XP_002324876.1| predicted protein [Populus trichocarpa] gi|222866310|gb|EEF03441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/358 (81%), Positives = 326/358 (91%), Gaps = 1/358 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
LF+ ++ L L+LS + NG A +TS F+RT+WP+ADIPL N+VF IPKG+NAPQQV ITQG
Sbjct: 12 LFRFVIILVLVLSYVENGNAGLTSTFVRTQWPAADIPLDNEVFAIPKGYNAPQQVHITQG 71
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DYDGKAVIISWVTP+E GS V+YG E YD SAEGTVTNYTFYKYKSGYIHHCLVD L
Sbjct: 72 DYDGKAVIISWVTPDEPGSISVKYGTSENSYDFSAEGTVTNYTFYKYKSGYIHHCLVDGL 131
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYD+KYYYKIG+GDSSR FWFQTPP+I PDA YTFGIIGDLGQTYNSLSTL+HYM+SGGQ
Sbjct: 132 EYDSKYYYKIGEGDSSRVFWFQTPPEIDPDASYTFGIIGDLGQTYNSLSTLEHYMKSGGQ 191
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
SVLF GDLSYADRY+Y+DVGIRWDSWGRF+EQSAAYQPWIWSAGNHEIE+MP M EV+PF
Sbjct: 192 SVLFAGDLSYADRYQYDDVGIRWDSWGRFVEQSAAYQPWIWSAGNHEIEYMPEMEEVLPF 251
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KS+LHR ATP+TASKSTNPLWYAIRRASAHIIVLSSYSP+VKYTPQW WLREELK+V+RE
Sbjct: 252 KSFLHRFATPHTASKSTNPLWYAIRRASAHIIVLSSYSPFVKYTPQWMWLREELKRVNRE 311
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
KTPWLIV+MHVP+Y+SN HYMEGESMRAVFESWFV S+VDFIFAGHVHAYERS R+S
Sbjct: 312 KTPWLIVVMHVPIYNSNAAHYMEGESMRAVFESWFVRSKVDFIFAGHVHAYERSYRIS 369
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548858|ref|XP_002515485.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223545429|gb|EEF46934.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/358 (81%), Positives = 321/358 (89%), Gaps = 1/358 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
L Q ++ + +LL L NG A ITS F R++WPS DIPL N+VF IPKGHNAPQQV ITQG
Sbjct: 3 LLQFLVVIVVLLDFLENGNAGITSSFTRSQWPSTDIPLDNQVFAIPKGHNAPQQVHITQG 62
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DYDGKAVIISW+T +E GS V+YGKLEKKY+ SA+GTVTNYTFY Y SGYIHHCLVD L
Sbjct: 63 DYDGKAVIISWITADEPGSINVEYGKLEKKYEFSAQGTVTNYTFYNYTSGYIHHCLVDGL 122
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYDTKY+YKIG+GDSSREFWF+TPPKI PDAPYTFGIIGDLGQTYNS STL+HYM SGGQ
Sbjct: 123 EYDTKYFYKIGEGDSSREFWFRTPPKIDPDAPYTFGIIGDLGQTYNSFSTLEHYMHSGGQ 182
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
+VLF+GDLSYADRY+YNDVGIRWDSWGRF+E S AYQPWIWSAGNHEIEFMP+MGE++PF
Sbjct: 183 TVLFVGDLSYADRYQYNDVGIRWDSWGRFVESSTAYQPWIWSAGNHEIEFMPDMGEILPF 242
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYLHR ATPY ASKS+NPLWYAIRRAS HIIVLSSYSPYVKYTPQW WLREE K+VDRE
Sbjct: 243 KSYLHRYATPYNASKSSNPLWYAIRRASTHIIVLSSYSPYVKYTPQWRWLREEFKRVDRE 302
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
KTPWLIVLMHVP+Y+SN HYMEGESMRAVFESWFVH +VDFIFAGHVHAYERS R+S
Sbjct: 303 KTPWLIVLMHVPIYNSNFGHYMEGESMRAVFESWFVHFKVDFIFAGHVHAYERSYRIS 360
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082127|emb|CBI21132.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/368 (78%), Positives = 324/368 (88%), Gaps = 1/368 (0%)
Query: 1 MAVSFAKLVPLFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHN 59
M V+ P F ++ L ++++ + +G+ARITS F R+EWPS DIPL N+ F IPKGHN
Sbjct: 1 MLVTSGGQFPSFHFLIILFIIVTTVRSGSARITSTFTRSEWPSTDIPLDNEAFAIPKGHN 60
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
APQQV ITQGDYDGKAVII+WVT +E GS++V YG LEKKYD SAEG VTNYTF Y SG
Sbjct: 61 APQQVHITQGDYDGKAVIITWVTTDEPGSSKVLYGTLEKKYDFSAEGNVTNYTFSNYSSG 120
Query: 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
YIHHCLV LE DTKYYYKIGDG SSREFWFQTPPKI PD YTFGIIGDLGQTYNSLST
Sbjct: 121 YIHHCLVHGLEPDTKYYYKIGDGGSSREFWFQTPPKIDPDTSYTFGIIGDLGQTYNSLST 180
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L+HYMQSG Q+VLF+GDLSYADRYE+NDVG+RWDSWGRF+E+SAAYQPWIW+AGNHE+E+
Sbjct: 181 LEHYMQSGAQTVLFVGDLSYADRYEFNDVGVRWDSWGRFVERSAAYQPWIWTAGNHEVEY 240
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
MPNMGEV+PFKSYLHR ATPY AS+S+NPLWYA+RRASAHIIVLSSYSP+VKYTPQW WL
Sbjct: 241 MPNMGEVLPFKSYLHRYATPYMASQSSNPLWYAVRRASAHIIVLSSYSPFVKYTPQWKWL 300
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
REELK+VDREKTPWLIVLMH P+YSSNV HYMEGESMRAVFESWFVH++VD IFAGHVHA
Sbjct: 301 REELKRVDREKTPWLIVLMHAPMYSSNVAHYMEGESMRAVFESWFVHAKVDLIFAGHVHA 360
Query: 360 YERSVRMS 367
YERS R+S
Sbjct: 361 YERSYRIS 368
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476175|ref|XP_002285496.2| PREDICTED: bifunctional purple acid phosphatase 26 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/337 (83%), Positives = 306/337 (90%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
ITS F R+EWPS DIPL N+ F IPKGHNAPQQV ITQGDYDGKAVII+WVT +E GS++
Sbjct: 36 ITSTFTRSEWPSTDIPLDNEAFAIPKGHNAPQQVHITQGDYDGKAVIITWVTTDEPGSSK 95
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
V YG LEKKYD SAEG VTNYTF Y SGYIHHCLV LE DTKYYYKIGDG SSREFWF
Sbjct: 96 VLYGTLEKKYDFSAEGNVTNYTFSNYSSGYIHHCLVHGLEPDTKYYYKIGDGGSSREFWF 155
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGI 210
QTPPKI PD YTFGIIGDLGQTYNSLSTL+HYMQSG Q+VLF+GDLSYADRYE+NDVG+
Sbjct: 156 QTPPKIDPDTSYTFGIIGDLGQTYNSLSTLEHYMQSGAQTVLFVGDLSYADRYEFNDVGV 215
Query: 211 RWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW 270
RWDSWGRF+E+SAAYQPWIW+AGNHE+E+MPNMGEV+PFKSYLHR ATPY AS+S+NPLW
Sbjct: 216 RWDSWGRFVERSAAYQPWIWTAGNHEVEYMPNMGEVLPFKSYLHRYATPYMASQSSNPLW 275
Query: 271 YAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY 330
YA+RRASAHIIVLSSYSP+VKYTPQW WLREELK+VDREKTPWLIVLMH P+YSSNV HY
Sbjct: 276 YAVRRASAHIIVLSSYSPFVKYTPQWKWLREELKRVDREKTPWLIVLMHAPMYSSNVAHY 335
Query: 331 MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
MEGESMRAVFESWFVH++VD IFAGHVHAYERS R+S
Sbjct: 336 MEGESMRAVFESWFVHAKVDLIFAGHVHAYERSYRIS 372
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120334|ref|XP_002331022.1| predicted protein [Populus trichocarpa] gi|222872952|gb|EEF10083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 279/358 (77%), Positives = 317/358 (88%), Gaps = 1/358 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
L Q++L + L + NG A ITS FIR+EWPS DIPL N+VF +PKG+NAPQQV ITQG
Sbjct: 11 LLQLILVFVIFLGFVKNGNAGITSAFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVHITQG 70
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DY+GKAVIISWVTP+E G+N+VQYG +KKYD +AEGTV NYTFY YKSGYIH CLVD L
Sbjct: 71 DYNGKAVIISWVTPDEPGTNKVQYGVSKKKYDFTAEGTVKNYTFYNYKSGYIHQCLVDGL 130
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EY+TKYYYKIG GDSSREFWFQTPPKI+PD PY FGIIGDLGQTYNSLSTL+HYMQSG Q
Sbjct: 131 EYETKYYYKIGSGDSSREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLSTLEHYMQSGAQ 190
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
+VLF+GDL+YADRY+YNDVGIRWDSWGRF+E+SAAYQPW+WSAGNHEIE+MP MGEVIPF
Sbjct: 191 AVLFVGDLAYADRYKYNDVGIRWDSWGRFVERSAAYQPWMWSAGNHEIEYMPYMGEVIPF 250
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYL+R TP+ ASKS++P WYAIRRASAHIIVLSSYS +VKYTPQW WLREELK+VDRE
Sbjct: 251 KSYLNRYPTPHLASKSSSPFWYAIRRASAHIIVLSSYSSFVKYTPQWEWLREELKRVDRE 310
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
KTPWLIVLMH+P+Y+SN H+MEGESMRAVFE WFV +VD +FAGHVHAYERS R+S
Sbjct: 311 KTPWLIVLMHIPIYNSNEAHFMEGESMRAVFEKWFVRYKVDVVFAGHVHAYERSYRVS 368
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446227|ref|XP_002264680.1| PREDICTED: bifunctional purple acid phosphatase 26-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 271/353 (76%), Positives = 312/353 (88%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
+ + + + NG ARITS F+R+E+PS DIPL NKVF +PKG+NAPQQV ITQGDYDGK
Sbjct: 20 ITFFVFMCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGK 79
Query: 75 AVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134
AVI+SWVT +E G ++VQYG EK YD +AEGT TNYTFYKY+SGYIHHCLVD LE+DTK
Sbjct: 80 AVIVSWVTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTK 139
Query: 135 YYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFL 194
YYYKIG G+SS+EFWFQTPP+I PDAPY FGIIGDLGQTYNSLSTL+HYM S GQ+VLFL
Sbjct: 140 YYYKIGSGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFL 199
Query: 195 GDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLH 254
GDLSYADRY+YNDVG+RWD+WGRF+EQSAAYQPWIWSAGNHEIE+MP MGEV+PFKSYL+
Sbjct: 200 GDLSYADRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLY 259
Query: 255 RIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314
R TPY ASKS++PLWYAIRRASAHIIVLSSYSP+V YTPQW WL EE K+V+REKTPWL
Sbjct: 260 RFPTPYAASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWL 319
Query: 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
IVLMHVP+Y+SN H+MEGESMRA FESWF+ ++VD +FAGHVHAYERS R+S
Sbjct: 320 IVLMHVPIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRIS 372
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147771668|emb|CAN71549.1| hypothetical protein VITISV_030234 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/353 (76%), Positives = 311/353 (88%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
+ + + + NG ARITS F+R+E+PS DIPL NKVF +PKG+NAPQQV ITQGDYDGK
Sbjct: 13 ITFFVFMCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGK 72
Query: 75 AVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134
AVI+SWVT +E G ++V YG EK YD +AEGT TNYTFYKY+SGYIHHCLVD LE+DTK
Sbjct: 73 AVIVSWVTTDEPGPSKVXYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTK 132
Query: 135 YYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFL 194
YYYKIG G+SS+EFWFQTPP+I PDAPY FGIIGDLGQTYNSLSTL+HYM S GQ+VLFL
Sbjct: 133 YYYKIGSGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFL 192
Query: 195 GDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLH 254
GDLSYADRY+YNDVG+RWD+WGRF+EQSAAYQPWIWSAGNHEIE+MP MGEV+PFKSYL+
Sbjct: 193 GDLSYADRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLY 252
Query: 255 RIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314
R TPY ASKS++PLWYAIRRASAHIIVLSSYSP+V YTPQW WL EE K+V+REKTPWL
Sbjct: 253 RFPTPYAASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWL 312
Query: 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
IVLMHVP+Y+SN H+MEGESMRA FESWF+ ++VD +FAGHVHAYERS R+S
Sbjct: 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRIS 365
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084523|emb|CBI25544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 271/347 (78%), Positives = 310/347 (89%)
Query: 21 LLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISW 80
+ + NG ARITS F+R+E+PS DIPL NKVF +PKG+NAPQQV ITQGDYDGKAVI+SW
Sbjct: 1 MCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKAVIVSW 60
Query: 81 VTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140
VT +E G ++VQYG EK YD +AEGT TNYTFYKY+SGYIHHCLVD LE+DTKYYYKIG
Sbjct: 61 VTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKYYYKIG 120
Query: 141 DGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYA 200
G+SS+EFWFQTPP+I PDAPY FGIIGDLGQTYNSLSTL+HYM S GQ+VLFLGDLSYA
Sbjct: 121 SGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLGDLSYA 180
Query: 201 DRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY 260
DRY+YNDVG+RWD+WGRF+EQSAAYQPWIWSAGNHEIE+MP MGEV+PFKSYL+R TPY
Sbjct: 181 DRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYRFPTPY 240
Query: 261 TASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320
ASKS++PLWYAIRRASAHIIVLSSYSP+V YTPQW WL EE K+V+REKTPWLIVLMHV
Sbjct: 241 AASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLIVLMHV 300
Query: 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
P+Y+SN H+MEGESMRA FESWF+ ++VD +FAGHVHAYERS R+S
Sbjct: 301 PIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRIS 347
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579857|ref|XP_002530765.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223529681|gb|EEF31625.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/362 (75%), Positives = 312/362 (86%)
Query: 6 AKLVPLFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVR 65
K++ I+ + LL +NN A ITS FIR+EWPS DIPL N+VF +PKG+NAPQQV
Sbjct: 5 TKMMQYMLILAFFVLLDFVNNANAGITSSFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVH 64
Query: 66 ITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCL 125
ITQGDY+GKAVIISWVTP+E GS++VQYG E KYD AEGT NYTFY+YKSGYIH CL
Sbjct: 65 ITQGDYNGKAVIISWVTPDEPGSSKVQYGVSENKYDFIAEGTARNYTFYQYKSGYIHQCL 124
Query: 126 VDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ 185
+DDLEYDTKYYYKIGDGDSSREF+FQTPP I+PD PY FGIIGDLGQTYNSLSTL+H++Q
Sbjct: 125 IDDLEYDTKYYYKIGDGDSSREFYFQTPPIINPDTPYKFGIIGDLGQTYNSLSTLEHFIQ 184
Query: 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGE 245
S Q+VLF+GDLSYADRY+YNDVGIRWDSWGRF+E+S AY PW+WSAGNHEIE+MP MGE
Sbjct: 185 SKAQAVLFVGDLSYADRYQYNDVGIRWDSWGRFVEKSTAYLPWLWSAGNHEIEYMPYMGE 244
Query: 246 VIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305
V PFKSYLHR TP+ ASKS++PLWYAIR ASAHIIVLSSYSP+VKYTPQW WL +ELK
Sbjct: 245 VTPFKSYLHRYPTPHLASKSSSPLWYAIRCASAHIIVLSSYSPFVKYTPQWEWLHQELKN 304
Query: 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVR 365
V+RE+TPWLIVLMHVPLY+SN H+MEGESMRAVFE WF+ +VD IFAGHVHAYERS R
Sbjct: 305 VNREQTPWLIVLMHVPLYNSNEAHFMEGESMRAVFEKWFIRYKVDIIFAGHVHAYERSYR 364
Query: 366 MS 367
+S
Sbjct: 365 IS 366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601492|gb|AET86956.1| PAP26 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/358 (76%), Positives = 313/358 (87%), Gaps = 1/358 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
LFQ +L ++L+ +NN A ITSRFIR EWPS DIPL ++VF +PKG+NAPQQV ITQG
Sbjct: 5 LFQFILVPFVILNFVNNVNAGITSRFIREEWPSVDIPLDHEVFAVPKGYNAPQQVHITQG 64
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
+YDG AVIISW+T +E GS++VQYGK +K Y+ SAEG +TNYTFYKY SGYIHH LVD L
Sbjct: 65 NYDGNAVIISWITFDEPGSSKVQYGKSDKNYEFSAEGKMTNYTFYKYNSGYIHHVLVDGL 124
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYDTKYYYK GDGDS+REFWFQTPP I PD PY FGIIGDLGQTYNSLSTL+HYM+SG Q
Sbjct: 125 EYDTKYYYKTGDGDSAREFWFQTPPMIGPDVPYKFGIIGDLGQTYNSLSTLEHYMESGAQ 184
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
SVLF+GDLSYADRY+YNDVGIRWDSWGRF+E+S AYQPWIWSAGNHEIE+MP M EV PF
Sbjct: 185 SVLFVGDLSYADRYKYNDVGIRWDSWGRFVEKSTAYQPWIWSAGNHEIEYMPYMNEVTPF 244
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYLHR TPY ASKS++P+WYAIRRASAHII+LSSYSP+VKYTPQW WL EEL +VDR+
Sbjct: 245 KSYLHRYPTPYLASKSSSPMWYAIRRASAHIIMLSSYSPFVKYTPQWKWLEEELNRVDRK 304
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
KTPWLIVL+HVP+Y+SN H+MEGESMRAVFE WF+H +VD IFAGHVHAYERS R+S
Sbjct: 305 KTPWLIVLVHVPIYNSNEAHFMEGESMRAVFEEWFIHHKVDVIFAGHVHAYERSYRIS 362
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 374 | ||||||
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.911 | 0.717 | 0.753 | 3.7e-151 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.893 | 0.712 | 0.613 | 1.2e-115 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.895 | 0.721 | 0.603 | 1.9e-113 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.898 | 0.717 | 0.595 | 1.8e-112 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.901 | 0.723 | 0.593 | 9e-109 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.893 | 0.716 | 0.587 | 2.7e-107 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.529 | 0.448 | 0.63 | 3.6e-66 | |
| TAIR|locus:2011501 | 396 | PAP5 "purple acid phosphatase | 0.697 | 0.659 | 0.456 | 1.6e-61 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.770 | 0.659 | 0.438 | 3.4e-61 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.783 | 0.675 | 0.434 | 1.9e-60 |
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 257/341 (75%), Positives = 299/341 (87%)
Query: 27 GTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNEL 86
G + ITS FIR+EWP+ DIPL + VF +PKG+NAPQQV ITQGDYDGKAVIISWVTP+E
Sbjct: 20 GESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGDYDGKAVIISWVTPDEP 79
Query: 87 GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSR 146
GS++V YG ++ KY+ A+GT NYTFYKYKSG+IHHCLV DLE+DTKYYYKI G+SSR
Sbjct: 80 GSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIESGESSR 139
Query: 147 EFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYN 206
EFWF TPP +HPDA Y FGIIGD+GQT+NSLSTL+HYM+SG Q+VLFLGDLSYADRY+YN
Sbjct: 140 EFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRYQYN 199
Query: 207 DVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKST 266
DVG+RWDSWGRF+E+S AYQPW+WSAGNHE+++MP MGEV PF++YL R TPY ASKS+
Sbjct: 200 DVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSS 259
Query: 267 NPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSN 326
+PLWYA+RRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREKTPWLIVLMHVP+Y+SN
Sbjct: 260 SPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPIYNSN 319
Query: 327 VVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
H+MEGESMRA FE WFV +VD IFAGHVHAYERS R+S
Sbjct: 320 EAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRIS 360
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 208/339 (61%), Positives = 263/339 (77%)
Query: 32 TSRFIR-TEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
TS ++R ++ P D+PL + VF++P G N+PQQV +TQG+++G VIISWVTP + GS
Sbjct: 31 TSEYVRGSDLPD-DMPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGSKT 89
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
VQY +K AE TV Y F+ Y SGYIHHCL+DDLE+DTKYYY+IG G SR FWF
Sbjct: 90 VQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRFWF 149
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHY-MQSG-GQSVLFLGDLSYADRYEYNDV 208
PPK PD PYTFG+IGDLGQTY+S STL HY M G GQ+VLF+GDLSYADRY +D
Sbjct: 150 FIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHDN 209
Query: 209 GIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNP 268
RWD+WGRF+E+S AYQPWIW+AGNHEI+F+P++GE+ PFK +++R TP+ AS S +P
Sbjct: 210 N-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISP 268
Query: 269 LWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328
LWY+I+RASA+IIV+S YS Y YTPQ+ WL +EL+ V+R +TPWLIVL+H P YSS V
Sbjct: 269 LWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVH 328
Query: 329 HYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
HYMEGE++R ++E WFV +VD +FAGHVHAYERS R+S
Sbjct: 329 HYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVS 367
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 204/338 (60%), Positives = 253/338 (74%)
Query: 32 TSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRV 91
+S FIR + D+PL + VF +P G+NAPQQV ITQGD GKAVI+SWVT +E GS+ V
Sbjct: 25 SSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEV 84
Query: 92 QYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQ 151
Y AEG + Y F+ Y SG+IHH + +LEY TKYYY++G G+++R+FWF
Sbjct: 85 HYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFV 144
Query: 152 TPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG--GQSVLFLGDLSYADRYEYNDVG 209
TPP+I PD PYTFG+IGDLGQ+++S TL HY + GQ+VLF+GDLSYAD Y +D
Sbjct: 145 TPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHD-N 203
Query: 210 IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPL 269
IRWDSWGRF E+S AYQPWIW+AGNHE F P +GE +PFK Y HR PY AS+ST+P
Sbjct: 204 IRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPF 263
Query: 270 WYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH 329
WY+I+RASAHIIVL+SYS Y KYTPQ+ WL +EL KV+R +TPWLIVLMH P Y+S H
Sbjct: 264 WYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYH 323
Query: 330 YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
YMEGE+MR ++E WFV +VD +FAGHVHAYERS R+S
Sbjct: 324 YMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVS 361
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 202/339 (59%), Positives = 249/339 (73%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
ITSR++R + D+PL + VF +P G+NAPQQV ITQGD +GKAVI+SWVT GSN+
Sbjct: 29 ITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAKGSNK 88
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
V Y K A G Y FY Y SG+IHHC + +LEYDTKYYY +G G + R+FWF
Sbjct: 89 VIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYDTKYYYVLGVGQTERKFWF 148
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG--GQSVLFLGDLSYADRYEYNDV 208
TPP+I PD PYTFG+IGDLGQ+Y+S TL HY + GQ+VLF+GD+SYAD Y +D
Sbjct: 149 FTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTYPDHD- 207
Query: 209 GIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNP 268
RWDSWGRF E+S AYQPWIW+ GNHE++F P +GE PFK + HR TPY +S ST P
Sbjct: 208 NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSGSTEP 267
Query: 269 LWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328
WY+I+R A+IIVL+SYS Y KYTPQ+ WL EE KV+R +TPWLIVLMH P Y+S
Sbjct: 268 FWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYNSYDY 327
Query: 329 HYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
HYMEGE+MR ++E+WFV +VD +FAGHVHAYERS R+S
Sbjct: 328 HYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVS 366
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 207/349 (59%), Positives = 256/349 (73%)
Query: 25 NNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP- 83
N+GT TS F+RT PS ++ L + F P GHNAP+QV I QGDY+G+ +IISWVTP
Sbjct: 20 NSGT---TSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHIVQGDYNGRGIIISWVTPL 74
Query: 84 NELGSNRVQYGKLE----KKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKI 139
N GSN V Y K K + ++Y FY Y SG++HH + LEYDTKY Y++
Sbjct: 75 NLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYEV 134
Query: 140 GDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG-GQSVLFLGDLS 198
G S R+F F +PPK+ PD PYTFGIIGDLGQT S TL HYM + GQ+VLF GDLS
Sbjct: 135 GTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQAVLFPGDLS 194
Query: 199 YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258
YAD + +D +WDSWGRF+E AAYQ +I++AGNHEI+F+PN+GE FK Y+HR
Sbjct: 195 YADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHN 253
Query: 259 PYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318
Y ASKS +PLWY+IRRASAHIIVLSSYS Y KYTPQ+ WL +ELKKV+RE+TPWLIV++
Sbjct: 254 AYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMV 313
Query: 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
H P Y+SN HYMEGESMRA+FESWFV+S+VD + +GHVH+YERS R+S
Sbjct: 314 HSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVS 362
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 202/344 (58%), Positives = 251/344 (72%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSN 89
ITS+F+R PS ++ L F P G+N P+QV +TQGD+DG+ +I+SWVTP N GSN
Sbjct: 22 ITSKFVRQALPSIEMSLDT--FPSPGGYNTPEQVHLTQGDHDGRGMIVSWVTPLNLAGSN 79
Query: 90 RVQY-----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDS 144
V Y G K A + +Y FY Y SG++HH + LEYDTKY Y++G S
Sbjct: 80 VVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKS 139
Query: 145 SREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG-GQSVLFLGDLSYADRY 203
R+F F TPPKI PD PYTFGIIGDLGQTY S TL HYM + GQ+VLF GDLSYAD +
Sbjct: 140 VRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDH 199
Query: 204 EYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263
+D +WD+WGRF+E AAYQP+I++AGNHEI+F+PN+GE FK Y HR Y AS
Sbjct: 200 PNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKAS 258
Query: 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLY 323
+ST+PLWY++RRASAHIIVLSSYS Y KYTPQ+ WL +ELK V+RE+TPWLIV++H P Y
Sbjct: 259 QSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWY 318
Query: 324 SSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
+SN HYMEGESMR +FESW V+S+VD + +GHVHAYERS R+S
Sbjct: 319 NSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 126/200 (63%), Positives = 157/200 (78%)
Query: 169 DLGQTYNSLSTLKHYMQSG-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227
DLGQTY S TL +YM + GQ+VLF+GDLSYAD + +D +WDS+GRF+E SAAYQP
Sbjct: 145 DLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDHPNHDQR-KWDSYGRFVEPSAAYQP 203
Query: 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS 287
W W+AGN+EI++ ++ E PFK Y +R PY AS+ST+PLWY+I+RAS +IIVLSSYS
Sbjct: 204 WSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYS 263
Query: 288 PYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS 347
Y KYTPQ WL++ELKKV+R +T WLIVL+H P Y+SN HYMEGESMR FE WFV +
Sbjct: 264 AYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVEN 323
Query: 348 RVDFIFAGHVHAYERSVRMS 367
+VD +FAGHVHAYERS R+S
Sbjct: 324 KVDIVFAGHVHAYERSKRIS 343
|
|
| TAIR|locus:2011501 PAP5 "purple acid phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 127/278 (45%), Positives = 181/278 (65%)
Query: 50 KVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQY--GKLEKKYDSSAEG 106
+ F P G+NAP+QV ITQGD++G+ +IISWVT NE GSN V Y + + S
Sbjct: 4 ETFPPPAGYNAPEQVHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKSVIA 63
Query: 107 TVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGI 166
T ++Y ++ Y SGY+HH ++ +LEY TKY+Y++G G S+R+F TPPK+ PD PYTFG+
Sbjct: 64 TTSSYRYFDYTSGYLHHAIIKELEYKTKYFYELGTGRSTRQFNL-TPPKVGPDVPYTFGV 122
Query: 167 IGDLGQTYNSLSTLKHYMQSG-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225
IGDLGQTY S TL +YM + GQ+VLF GDLSYAD + +D +WDS+GRF+E SAAY
Sbjct: 123 IGDLGQTYASNQTLYNYMSNPKGQAVLFAGDLSYADDHPNHDQS-KWDSYGRFVEPSAAY 181
Query: 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKST-NPL--WYA-----IRRAS 277
QPWIW+AGNHEI++ ++GE PFK Y +R PY AS++ P W + R+
Sbjct: 182 QPWIWAAGNHEIDYAQSIGETQPFKPYKNRYHVPYRASQNKYTPQNSWLQDEFKKVNRSE 241
Query: 278 AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315
+++ ++P+ + + ++ E +V E PW +
Sbjct: 242 TPWLIVLVHAPWYN-SNNYHYMEGESMRVTFE--PWFV 276
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| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 133/303 (43%), Positives = 182/303 (60%)
Query: 61 PQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGY 120
PQQV I+ D V ++ T + ++ V+YGK KKYD G T+YT++ Y SG
Sbjct: 51 PQQVHISLAGKDHMRV--TYTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGK 108
Query: 121 IHHCLVDDLEYDTKYYYKIGD-GDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
IHH + L+ +TKYYY+ G GD EF F+TPP P F + GDLGQT ++ T
Sbjct: 109 IHHVKIGPLKPNTKYYYRCGGHGD---EFSFKTPPS---KFPIEFAVAGDLGQTDWTVRT 162
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L + L GDLSYAD ++ WDS+GR +E A+ +PW+ + GNHEIE
Sbjct: 163 LDQIRKRDFDVFLLPGDLSYADTHQP-----LWDSFGRLLETLASTRPWMVTEGNHEIES 217
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
P + I FKSY R P+ S S + L+Y+ A H ++L SY+PY ++ Q+ WL
Sbjct: 218 FPT-NDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWL 276
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
+ +L+KVDR+KTPWL+V+MH P YS+N HY EGE MR+ ES ++VD +FAGHVH
Sbjct: 277 QADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHT 336
Query: 360 YER 362
YER
Sbjct: 337 YER 339
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| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 133/306 (43%), Positives = 184/306 (60%)
Query: 61 PQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGY 120
PQQV I+ D V +++T + + V+YGK KYD A G T+Y ++ YKSG
Sbjct: 47 PQQVHISLAGKDHMRV--TFITEDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSGK 104
Query: 121 IHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTL 180
IHH + L+ +T YYY+ G G+ EF F+TPP P F I+GDLGQT + +TL
Sbjct: 105 IHHVKIGPLQANTTYYYRCG-GNGP-EFSFKTPPSTFP---VEFAIVGDLGQTEWTAATL 159
Query: 181 KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240
H L GDLSYAD ++ WDS+GR +E A+ +PW+ + GNHEIEF
Sbjct: 160 SHINSQDYDVFLLPGDLSYADTHQP-----LWDSFGRLVEPLASKRPWMVTEGNHEIEFF 214
Query: 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLR 300
P + E FKSY R P+T S ST+ L+Y+ A H ++L SY+ + + Q+ WL+
Sbjct: 215 PII-EHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQ 273
Query: 301 EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360
+L KVDR+ TPW++VL+H P Y++N H EGESMR ES ++RVD +F+GHVHAY
Sbjct: 274 ADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAY 333
Query: 361 ERSVRM 366
ER R+
Sbjct: 334 ERFKRV 339
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q949Y3 | PPA26_ARATH | 1, ., 1, 1, ., 1, ., 7 | 0.7338 | 0.9545 | 0.7515 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.963 |
| 3rd Layer | 3.6.1.13 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.2 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pg.C_LG_XVIII0431 | hypothetical protein (478 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 374 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 2e-69 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 4e-68 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-22 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 4e-07 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 0.002 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 2e-69
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 14/217 (6%)
Query: 158 PDAPYTFGIIGDLGQ-TYNSLSTLKHYMQSGG--QSVLFLGDLSYADRYEYNDVGIRWDS 214
D P+ F + GD+GQ T NS +TL H + G ++L +GDL+YAD + G RWD+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYAD---GYNNGSRWDT 57
Query: 215 WGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIR 274
+ R IE A+Y P++ + GNHE ++ I R P++ S ST+ LWY+
Sbjct: 58 FMRQIEPLASYVPYMVTPGNHEADY-NFSFYKIKAFFP--RFRFPHSPSGSTSNLWYSFD 114
Query: 275 RASAHIIVLSSYSPYV---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYM 331
H + LS+ + +PQ+ WL +L KVDR KTPW+IV+ H P+Y SN H
Sbjct: 115 VGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDD 174
Query: 332 --EGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366
EGE MRA E F VD + +GHVHAYER+ +
Sbjct: 175 CIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPV 211
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Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 220 bits (561), Expect = 4e-68
Identities = 118/309 (38%), Positives = 178/309 (57%), Gaps = 15/309 (4%)
Query: 61 PQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYK-YKSG 119
P QV I+ D + ISW+T + + V YG + KY+ SA GT ++Y + Y+SG
Sbjct: 44 PDQVHISLVGPD--KMRISWITQDSI-PPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSG 100
Query: 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
I+ ++ L+ +T YYYK G S++EF F+TPP P F + GDLG + + ST
Sbjct: 101 QINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKST 157
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L+H + + GDLSYA+ Y+ WD++GR ++ A+ +PW+ + GNHE+E
Sbjct: 158 LEHVSKWDYDVFILPGDLSYANFYQ-----PLWDTFGRLVQPLASQRPWMVTHGNHELEK 212
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
+P + F +Y R P+ S ST+ L+Y+ HII+L SY+ + + Q+ WL
Sbjct: 213 IPILHPE-KFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWL 271
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES--MRAVFESWFVHSRVDFIFAGHV 357
LKK+DR+ TPW++ ++H P Y+SN H E ES M+ E+ +RVD +FAGHV
Sbjct: 272 ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHV 331
Query: 358 HAYERSVRM 366
HAYER R+
Sbjct: 332 HAYERFDRV 340
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Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 93.7 bits (232), Expect = 1e-22
Identities = 41/202 (20%), Positives = 60/202 (29%), Gaps = 21/202 (10%)
Query: 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQS----VLFLGDLSYADRYEYNDVGIRWDSWGRF 218
+IGDL + L L ++ G+ VLFLGDL + + F
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL------F 54
Query: 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASA 278
+ A P GNH+ + + + L + S T
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTV----------- 103
Query: 279 HIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRA 338
II LSS +L + I+L+H PL S
Sbjct: 104 EIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEE 163
Query: 339 VFESWFVHSRVDFIFAGHVHAY 360
E + VD + GH H
Sbjct: 164 ALEDLLKDNGVDLVLRGHTHVP 185
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This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 4e-07
Identities = 16/84 (19%), Positives = 23/84 (27%), Gaps = 7/84 (8%)
Query: 297 WWLREELKKVDREKTPWL-------IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349
L L + P I+L H P Y + + V
Sbjct: 45 EVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGV 104
Query: 350 DFIFAGHVHAYERSVRMSFPFHFF 373
D + +GH H YER +
Sbjct: 105 DLVLSGHTHVYERREPDGGGTLYI 128
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Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSS--NVVHYMEGESMRAVFESWFVHSRVDFI 352
Q WL + L W IV+ H P+YSS + + + + + +VD
Sbjct: 153 QLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKK----YKVDAY 205
Query: 353 FAGHVH 358
+GH H
Sbjct: 206 LSGHDH 211
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Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 374 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.97 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.97 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.97 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.92 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.91 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.91 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.9 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.87 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.81 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.78 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.77 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.73 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.73 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.66 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.66 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.66 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.62 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.54 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.54 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.53 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.53 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.5 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.5 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.42 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.41 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.36 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.33 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.24 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.16 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.1 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.1 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.06 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.05 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.03 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.03 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.03 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.01 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.0 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.91 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.85 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.85 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.81 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.8 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.74 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.68 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.63 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.62 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.62 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.57 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.54 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.54 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.51 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.5 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.48 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.44 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.39 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.37 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.31 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.26 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.25 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.25 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.16 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.16 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.14 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.09 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.08 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.06 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.06 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.02 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.99 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 97.98 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.96 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.86 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.81 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.72 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.72 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.66 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.58 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.56 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.53 | |
| PHA02239 | 235 | putative protein phosphatase | 97.47 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.39 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.38 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 97.37 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.29 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.27 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.24 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.13 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.1 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.07 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.06 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.0 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.93 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.93 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.91 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.88 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.84 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.8 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.63 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.59 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.57 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.45 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.09 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.88 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.65 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.61 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.38 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.37 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 95.15 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 95.07 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.06 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.04 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.71 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 94.65 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 94.57 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 94.45 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 94.23 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 94.15 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.92 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 93.77 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 93.32 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 93.18 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 93.09 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 93.01 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 88.19 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 85.77 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 82.89 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 82.75 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 82.05 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-71 Score=524.85 Aligned_cols=336 Identities=37% Similarity=0.598 Sum_probs=292.7
Q ss_pred hhccCCCcccccccCCCCCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCC--
Q 017284 24 LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYD-- 101 (374)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~-- 101 (374)
...|..+.++.+.|...++..++....++..|...++|+||||++++... +|+|+|.|.+. ..+.|+||...++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~ 85 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNS 85 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCcccc
Confidence 34566888899999988888888888778888888999999999999864 99999999964 358999998776532
Q ss_pred ---ceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCCC-CCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcH
Q 017284 102 ---SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDG-DSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSL 177 (374)
Q Consensus 102 ---~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~-~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~ 177 (374)
..+.+.+..|...+++++++|+|++++|+|+|+||||||++ .||++++|+|+| ++..+.+|+++||+|......
T Consensus 86 ~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~ 163 (452)
T KOG1378|consen 86 AARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT 163 (452)
T ss_pred ccccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEcccccccccc
Confidence 22333333444445789999999999999999999999997 579999999999 345799999999999998877
Q ss_pred HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCccccccccccc
Q 017284 178 STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRI 256 (374)
Q Consensus 178 ~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f 256 (374)
.++....++ ++|+|||.||++|++++.+ .+||+|++++||+++.+|||++.||||+++.+.. .|.+|.+||
T Consensus 164 s~~~~~~~~~k~d~vlhiGDlsYa~~~~n----~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf 235 (452)
T KOG1378|consen 164 STLRNQEENLKPDAVLHIGDLSYAMGYSN----WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARF 235 (452)
T ss_pred chHhHHhcccCCcEEEEecchhhcCCCCc----cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceee
Confidence 788877777 5999999999999998732 6999999999999999999999999999876433 689999999
Q ss_pred ccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCC--CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCC-CCCCC
Q 017284 257 ATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV--KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYMEG 333 (374)
Q Consensus 257 ~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~-~~~~~ 333 (374)
.||.+++.+..++||||++|+||||+|+|+.+++ .+.+|++||+++|++++|+++||+||++|.|+|++... +.+++
T Consensus 236 ~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG 315 (452)
T KOG1378|consen 236 NMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREG 315 (452)
T ss_pred ccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccC
Confidence 9999988888899999999999999999998863 46899999999999999877999999999999998875 66777
Q ss_pred H--HHHHHHHHHHHHcCCcEEEEcCcccccccccccCCce
Q 017284 334 E--SMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFH 371 (374)
Q Consensus 334 ~--~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h 371 (374)
+ .+|+.|++||.+++||+||.||+|+|||++|++|.+.
T Consensus 316 ~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 316 EFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred cchhhHHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 6 8999999999999999999999999999999999875
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-68 Score=515.91 Aligned_cols=329 Identities=36% Similarity=0.609 Sum_probs=277.8
Q ss_pred ccCCCcccccccCCCCCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEE
Q 017284 26 NGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAE 105 (374)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~ 105 (374)
.|+.+.+..|+|++...+.++... .+..+..|+||||++++ .++|+|+|.|.+. ..+.|+||++++.+..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~ 85 (427)
T PLN02533 13 IVLAGNVLSYDRPGTRKNLVIHPD----NEDDPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSAN 85 (427)
T ss_pred hhhccCcccccCCCcccccccccc----CCCCCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEE
Confidence 445668899999954333222211 12345789999999997 4799999999964 5689999999998999999
Q ss_pred eEEEEEEe-ecccccEEEEEEeCCCCCCCEEEEEeCCCCCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHH
Q 017284 106 GTVTNYTF-YKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYM 184 (374)
Q Consensus 106 g~~~~~~~-~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~ 184 (374)
|++++|+. ..+.++++|+|+|+||+|+|+|+|||+++.+|++++|+|+|.. .+++|+++||+|.......+++++.
T Consensus 86 g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~~~tl~~i~ 162 (427)
T PLN02533 86 GTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWTKSTLEHVS 162 (427)
T ss_pred EEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCC---CCeEEEEEEeCCCCcccHHHHHHHH
Confidence 99888875 2356789999999999999999999998777899999999853 6899999999998766667888888
Q ss_pred HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCC
Q 017284 185 QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264 (374)
Q Consensus 185 ~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~ 264 (374)
+.+|||||++||++|++.. +.+|+.|++.++++.+.+|+|+++||||....+.. ....|..|.++|.||..+.+
T Consensus 163 ~~~pD~vl~~GDl~y~~~~-----~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g 236 (427)
T PLN02533 163 KWDYDVFILPGDLSYANFY-----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESG 236 (427)
T ss_pred hcCCCEEEEcCccccccch-----HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccC
Confidence 8899999999999997654 67899999999999999999999999998643321 22357789999999987666
Q ss_pred CCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCC--CHHHHHHHHH
Q 017284 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME--GESMRAVFES 342 (374)
Q Consensus 265 ~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~--~~~~r~~l~~ 342 (374)
...+.||||++|++|||+||++.++....+|++||+++|++++|++++|+||++|+|+|++...+... ...+|+.|++
T Consensus 237 ~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~ 316 (427)
T PLN02533 237 STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMET 316 (427)
T ss_pred CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHH
Confidence 67789999999999999999998887889999999999999887788999999999999987654332 2457889999
Q ss_pred HHHHcCCcEEEEcCcccccccccccCCc
Q 017284 343 WFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 343 ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
+|++++||++|+||+|.|||++|+++++
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~ 344 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGK 344 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCc
Confidence 9999999999999999999999998864
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=289.49 Aligned_cols=206 Identities=41% Similarity=0.743 Sum_probs=162.5
Q ss_pred CCCcEEEEEecCCCC-CCcHHHHHHHHH--hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 159 DAPYTFGIIGDLGQT-YNSLSTLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~-~~~~~~l~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
+.++||+++||+|.. .....+++++.+ .+|||||++||++|+.+... ..+|+.|++.++++...+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~---~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN---GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCcc---chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 358999999999973 456778888887 49999999999999766421 368999999999998899999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC---CCChHHHHHHHHHHhhccCCCCC
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
|......... ...+..++.++........+.||+|++|++|||+|||+... ....+|++||+++|+++++.+.+
T Consensus 79 D~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 9864321110 11111123334333444567899999999999999998765 45789999999999997666679
Q ss_pred eEEEEecccceecCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCc
Q 017284 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
|+||++|+|+|+....... .....++.|+++|++++|++||+||+|.|+|++|+++++
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~ 215 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGT 215 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCE
Confidence 9999999999987654322 245788999999999999999999999999999997753
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=245.28 Aligned_cols=285 Identities=17% Similarity=0.171 Sum_probs=205.3
Q ss_pred eCCCCCceEEEEEcCCC-------CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 69 GDYDGKAVIISWVTPNE-------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 69 ~~d~~~~~~v~W~t~~~-------~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.|||..+.+|.|++.+. +.+..+|+++.++..+.+..|+..+. ....+.+++.++||+|++.|+||+..
T Consensus 45 SGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~~~yfYRf~~ 120 (522)
T COG3540 45 SGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPDQDYFYRFKA 120 (522)
T ss_pred cCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCCceEEEEEee
Confidence 36788999999998751 34556777777664444444443332 24679999999999999999999987
Q ss_pred C-CCCceEEEECCCCCCCCC-CcEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCcc-------------
Q 017284 142 G-DSSREFWFQTPPKIHPDA-PYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYN------------- 206 (374)
Q Consensus 142 ~-~~s~~~~F~T~p~~~~~~-~~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~------------- 206 (374)
+ ..|++++|||+|+.+... .++|+..+|.+.+.+...+++.|.+.+||||||+||+||+++....
T Consensus 121 ~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~ 200 (522)
T COG3540 121 GDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVT 200 (522)
T ss_pred CCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccC
Confidence 5 568999999999886543 4677788888888788889999999999999999999998875310
Q ss_pred -----------ccchhhHHHH--HHHHHhhhcCCeEEcCCCcccccCCCCCCcc--c-----------ccccccccc-cC
Q 017284 207 -----------DVGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI--P-----------FKSYLHRIA-TP 259 (374)
Q Consensus 207 -----------~~~~~w~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~--~-----------~~~y~~~f~-~p 259 (374)
++..+|..+. ..++...+..||++.|++||+.+|...+... + ..++++++. ||
T Consensus 201 ~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mP 280 (522)
T COG3540 201 QHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMP 280 (522)
T ss_pred CCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCc
Confidence 1222332221 3366777889999999999998654221111 0 113334333 77
Q ss_pred cCCCCC--CCCceEEEecCC-EEEEEEeCCCCC----------------------CCChHHHHHHHHHHhhccCCCCCeE
Q 017284 260 YTASKS--TNPLWYAIRRAS-AHIIVLSSYSPY----------------------VKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 260 ~~~~~~--~~~~~ysf~~g~-v~fi~Ldt~~~~----------------------~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
.+.... ....|.+|.+|+ +.|.+||+.+.- ..|.+|.+||++.|.+ +++.|+
T Consensus 281 iR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWn 357 (522)
T COG3540 281 IRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWN 357 (522)
T ss_pred cccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhh
Confidence 765432 357999999999 789999995311 2478999999999999 899999
Q ss_pred EEEecccceec---CC----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcCcccc
Q 017284 315 IVLMHVPLYSS---NV----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAY 360 (374)
Q Consensus 315 iv~~H~P~y~~---~~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~y 360 (374)
|+..-.|+--. +. ..+.....-|+.|...+...++. +||+|++|..
T Consensus 358 Via~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 358 VIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred hhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 99988887321 11 01122244688999999999886 8999999974
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=255.66 Aligned_cols=287 Identities=20% Similarity=0.268 Sum_probs=152.9
Q ss_pred eCCCCCceEEEEEcCCC--------CCCceEEEeecCCCCCc--eEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 69 GDYDGKAVIISWVTPNE--------LGSNRVQYGKLEKKYDS--SAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 69 ~~d~~~~~~v~W~t~~~--------~~~~~V~y~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.|||..+.+|.|++... ..+..|++..+.+.... ...+...+ ....++++++.++||+|+|+|+||
T Consensus 5 sGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y~ 80 (453)
T PF09423_consen 5 SGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYYR 80 (453)
T ss_dssp EE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEEE
T ss_pred ccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEEE
Confidence 45678899999999865 12445666665544332 33333322 235679999999999999999999
Q ss_pred eCCC---CCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHHH-hCCCeEEecccccccCCCC---c------
Q 017284 139 IGDG---DSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ-SGGQSVLFLGDLSYADRYE---Y------ 205 (374)
Q Consensus 139 v~~~---~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~~-~~~d~vl~~GD~~y~~~~~---~------ 205 (374)
+..+ ..++.++|+|+|... ...+||+++||.+.......++.++.+ .+|||+||+||++|++... .
T Consensus 81 ~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~ 159 (453)
T PF09423_consen 81 FVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPI 159 (453)
T ss_dssp EEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S
T ss_pred EEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccc
Confidence 9873 567899999997543 346999999999886666888899988 4999999999999988520 0
Q ss_pred ----------c---ccchhhHHHH--HHHHHhhhcCCeEEcCCCcccccCCCCCCc-------ccc-----cccccccc-
Q 017284 206 ----------N---DVGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEV-------IPF-----KSYLHRIA- 257 (374)
Q Consensus 206 ----------~---~~~~~w~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~-------~~~-----~~y~~~f~- 257 (374)
. ++..+|..+. ..++.+.+.+|++.+|++||+..+...... ..+ .+++.++.
T Consensus 160 ~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~ 239 (453)
T PF09423_consen 160 GRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEY 239 (453)
T ss_dssp -----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhh
Confidence 0 0112222221 235677789999999999999644321111 011 12222222
Q ss_pred cCcCC---CCCCCCceEEEecCC-EEEEEEeCCCC---------------------CCCChHHHHHHHHHHhhccCCCCC
Q 017284 258 TPYTA---SKSTNPLWYAIRRAS-AHIIVLSSYSP---------------------YVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 258 ~p~~~---~~~~~~~~ysf~~g~-v~fi~Ldt~~~---------------------~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
+|... .+.....|++|.+|+ +.|++||+... -.++.+|++||++.|++ +.++
T Consensus 240 ~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~ 316 (453)
T PF09423_consen 240 QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQAT 316 (453)
T ss_dssp S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SS
T ss_pred cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCCc
Confidence 34331 123456899999999 99999999531 12478999999999998 5689
Q ss_pred eEEEEecccceecCC-----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcCccccccc
Q 017284 313 WLIVLMHVPLYSSNV-----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERS 363 (374)
Q Consensus 313 w~iv~~H~P~y~~~~-----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~yeR~ 363 (374)
|+||..-.|+..... ..+......|+.|.++|.+.++. ++|+|++|...-.
T Consensus 317 ~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~ 380 (453)
T PF09423_consen 317 WKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAAS 380 (453)
T ss_dssp EEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEE
T ss_pred EEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheee
Confidence 999998887744321 12333466799999999998875 7899999996543
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=234.24 Aligned_cols=196 Identities=21% Similarity=0.311 Sum_probs=139.3
Q ss_pred cEEEEEecCCCC-CCcHH----HHHHHHH-hCCCeEEecccccccCCCCccccchhh-HHHHHHHHHhhhcCCeEEcCCC
Q 017284 162 YTFGIIGDLGQT-YNSLS----TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRW-DSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~-~~~~~----~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w-~~~~~~~~~~~~~~P~~~v~GN 234 (374)
++|+++||+|.. ..... .+.++.+ .+|||||++||++|+++....+ ...| +.|.+.+..+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 22222 2333333 4999999999999987643222 2334 3455555444457899999999
Q ss_pred cccccCCCCCCcccccc--cccccccCcCCCCCCCCceEEEecC------CEEEEEEeCCCCC---------------CC
Q 017284 235 HEIEFMPNMGEVIPFKS--YLHRIATPYTASKSTNPLWYAIRRA------SAHIIVLSSYSPY---------------VK 291 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~--y~~~f~~p~~~~~~~~~~~ysf~~g------~v~fi~Ldt~~~~---------------~~ 291 (374)
||...+. ..+..+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~--~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNV--SAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCc--hheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 9986321 11111111 12333333 579999998 7999999996421 13
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCce
Q 017284 292 YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFH 371 (374)
Q Consensus 292 ~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h 371 (374)
+.+|++||+++|+++ ..+|+||++|+|+++..... .....++.|++++++++|++||+||.|.+++..+-..+++
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~ 224 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTS 224 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcE
Confidence 579999999999985 34899999999999765422 2256788999999999999999999999999987656777
Q ss_pred ec
Q 017284 372 FF 373 (374)
Q Consensus 372 ~~ 373 (374)
++
T Consensus 225 ~i 226 (277)
T cd07378 225 FV 226 (277)
T ss_pred EE
Confidence 65
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=236.78 Aligned_cols=199 Identities=15% Similarity=0.244 Sum_probs=141.9
Q ss_pred CCCcEEEEEecCCCCCCcHHHHH----HHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHHHhh--hcCCeEE
Q 017284 159 DAPYTFGIIGDLGQTYNSLSTLK----HYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA--AYQPWIW 230 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~~l~----~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~--~~~P~~~ 230 (374)
+..++|+++||+|.+...+..++ .+.+. ++||||.+||+. .++....+ +.+|.. |.+...+.. ..+||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcchhhCCCeEE
Confidence 35899999999997655554444 33333 899999999998 45554444 667765 444444433 5789999
Q ss_pred cCCCcccccCCCCCCccccc------------------ccccccccCcCCCCCCCCceEEE----ec-------------
Q 017284 231 SAGNHEIEFMPNMGEVIPFK------------------SYLHRIATPYTASKSTNPLWYAI----RR------------- 275 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~------------------~y~~~f~~p~~~~~~~~~~~ysf----~~------------- 275 (374)
++||||+..+.... ...+. ....||.|| +.||.+ ..
T Consensus 102 vLGNHDy~Gn~~AQ-i~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP--------~~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 102 VLGQADWDGNYNAE-LLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP--------NYWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred eCCcccccCCchhh-hccccccccccccccccccccccccCCCccCC--------chhheeeeeeecccccccccccCCC
Confidence 99999986432210 00010 123588888 467754 22
Q ss_pred CCEEEEEEeCCC-----CCC-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCC
Q 017284 276 ASAHIIVLSSYS-----PYV-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349 (374)
Q Consensus 276 g~v~fi~Ldt~~-----~~~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~V 349 (374)
..+.||+|||.. ++. ....|++||+++|+.+ ++.++|+||+.|||+|+++..+ ....+++.|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 228999999953 122 2468999999999754 3567899999999999987642 446789999999999999
Q ss_pred cEEEEcCcccccccccccCCceec
Q 017284 350 DFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 350 dlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
|++|+||+|+|||..+ ++++|+
T Consensus 250 dlYisGHDH~lq~i~~--~gt~yI 271 (394)
T PTZ00422 250 DLYISGYDRNMEVLTD--EGTAHI 271 (394)
T ss_pred CEEEEccccceEEecC--CCceEE
Confidence 9999999999999864 566665
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=217.75 Aligned_cols=198 Identities=18% Similarity=0.194 Sum_probs=140.1
Q ss_pred CCcEEEEEecCCCCCC--c---------------HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYN--S---------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~--~---------------~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~ 220 (374)
.+++|+++||+|.+.. . ..+++.+.+. +||+||++||+++...... ....+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~-~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDE-LRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchh-hHHHHHHHHHHHHh
Confidence 5899999999998731 1 1233445555 8999999999997544311 01234566666666
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC------CCChH
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY------VKYTP 294 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~------~~~~~ 294 (374)
.+...+|+++++||||+...+. ...+..|...| +..||+|++|+++||+|||.... ....+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 6656789999999999853221 11122233333 24589999999999999996422 23579
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC----CCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCc
Q 017284 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY----MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~----~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
|++||+++|+++.+.+.+++||++|+|++....... ......++.+.++|++++|+++||||+|.+++. ...++
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~--~~~g~ 226 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG--RYGGL 226 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce--EECCE
Confidence 999999999987544677999999999986443211 123567889999999999999999999999874 35676
Q ss_pred eec
Q 017284 371 HFF 373 (374)
Q Consensus 371 h~~ 373 (374)
+++
T Consensus 227 ~~~ 229 (262)
T cd07395 227 EMV 229 (262)
T ss_pred EEE
Confidence 654
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=198.65 Aligned_cols=190 Identities=22% Similarity=0.286 Sum_probs=126.4
Q ss_pred cEEEEEecCCCCCC----------cHH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 162 YTFGIIGDLGQTYN----------SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 162 ~~f~v~gD~~~~~~----------~~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
|||+++||+|.... ... +++.+++.+||+||++||+++..... ....|+.+.+.+..+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~---~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNAR---AEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCch---HHHHHHHHHHHHHhc--CCC
Confidence 69999999995532 112 23445455899999999999643310 124455555555443 489
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC-------------------
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------------------- 288 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~------------------- 288 (374)
+++++||||..... ..+.. . .. ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~--------~~~~~-~-~~---~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPS--------REYLL-L-YT---LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCcccccccc--------Hhhhh-c-cc---ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 99999999985321 00100 0 00 01134579999999999999999531
Q ss_pred -------------C--CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 017284 289 -------------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFI 352 (374)
Q Consensus 289 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdlv 352 (374)
+ ....+|++||+++|+++.. +..++||++|+|++...... ......++.+.+++.++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 2357999999999998642 33568999999987654311 11112356788999995 79999
Q ss_pred EEcCcccccccccccCCceec
Q 017284 353 FAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 353 lsGH~H~yeR~~~~~~~~h~~ 373 (374)
|+||+|.++... .+|+.++
T Consensus 221 ~~GH~H~~~~~~--~~gi~~~ 239 (267)
T cd07396 221 ISGHDHEGGYAQ--RHGIHFL 239 (267)
T ss_pred EcCCcCCCCccc--cCCeeEE
Confidence 999999997443 5666654
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-24 Score=192.18 Aligned_cols=184 Identities=18% Similarity=0.194 Sum_probs=128.4
Q ss_pred EEEEEecCCCCCCc-------------HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 163 TFGIIGDLGQTYNS-------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 163 ~f~v~gD~~~~~~~-------------~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
||+++||+|.+... ..+++.+.+. +||+||++||+++... ...|+.+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987431 2234455555 8999999999997532 34455666666655 689
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHHHHHHHH
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLREEL 303 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~WL~~~L 303 (374)
++.++||||... .+...|..... .....+|+|+.++++||+||+.... ....+|++||++.|
T Consensus 73 ~~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 999999999742 12222211100 1345689999999999999996532 13578999999999
Q ss_pred hhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccCCceec
Q 017284 304 KKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 304 ~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
++.. .+++|+++|+|++....... ......++.+.+++.++ +|+++|+||+|...+.. .+|++++
T Consensus 139 ~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--~~g~~~~ 205 (240)
T cd07402 139 AEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--WGGIPLL 205 (240)
T ss_pred HhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--ECCEEEE
Confidence 9852 45688999999976532111 01112367899999999 99999999999976553 4777654
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-24 Score=186.18 Aligned_cols=205 Identities=19% Similarity=0.291 Sum_probs=135.7
Q ss_pred EEECCCCCCCCCCcEEEEEecCCCCCCcHH-H----HHHHHHh-CCCeEEecccccccCCCCccccchhhH-HHHHHHH-
Q 017284 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSLS-T----LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWD-SWGRFIE- 220 (374)
Q Consensus 149 ~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~-~----l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~-~~~~~~~- 220 (374)
++.-|+. ++..++|+++||+|..+.... . +..+.+. +.||||.+||++|.++..... +.+++ .|.+...
T Consensus 33 ~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 33 RLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTA 109 (336)
T ss_pred hhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccC
Confidence 4555444 357899999999996544322 1 2234444 999999999999988864332 33332 2333322
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCccc--ccccccccccCcCCCCCCCCceEE------EecCCEEEEEEeCCC-----
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIP--FKSYLHRIATPYTASKSTNPLWYA------IRRASAHIIVLSSYS----- 287 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~--~~~y~~~f~~p~~~~~~~~~~~ys------f~~g~v~fi~Ldt~~----- 287 (374)
|.+ +.||+.+.||||+..+-. .+.. +.....||..|. .||. +..-++.++|+|+..
T Consensus 110 pSL-QkpWy~vlGNHDyrGnV~--AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~ 178 (336)
T KOG2679|consen 110 PSL-QKPWYSVLGNHDYRGNVE--AQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDD 178 (336)
T ss_pred ccc-ccchhhhccCccccCchh--hhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheeccccc
Confidence 333 459999999999865421 1111 334455666552 2221 111134445555422
Q ss_pred --CCC-------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 288 --PYV-------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 288 --~~~-------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
++. ....|+.||+..|++ +.++|+||+.|||+.+.+.+ +...+++++|.|||++++||++++||+|
T Consensus 179 ~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDH 253 (336)
T KOG2679|consen 179 VYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDH 253 (336)
T ss_pred ccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchh
Confidence 111 125788999999999 78999999999999886643 3567899999999999999999999999
Q ss_pred cccccccccCCcee
Q 017284 359 AYERSVRMSFPFHF 372 (374)
Q Consensus 359 ~yeR~~~~~~~~h~ 372 (374)
+.+...-.-+++.|
T Consensus 254 cLQhis~~e~~iqf 267 (336)
T KOG2679|consen 254 CLQHISSPESGIQF 267 (336)
T ss_pred hhhhccCCCCCeeE
Confidence 99886655666655
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-23 Score=188.36 Aligned_cols=190 Identities=17% Similarity=0.168 Sum_probs=122.6
Q ss_pred EEEEecCCCCCCcHH--------HHHHHHHhCCCeEEecccccccCCCC---ccccchhhHHHHHHHHHhhh--cCCeEE
Q 017284 164 FGIIGDLGQTYNSLS--------TLKHYMQSGGQSVLFLGDLSYADRYE---YNDVGIRWDSWGRFIEQSAA--YQPWIW 230 (374)
Q Consensus 164 f~v~gD~~~~~~~~~--------~l~~~~~~~~d~vl~~GD~~y~~~~~---~~~~~~~w~~~~~~~~~~~~--~~P~~~ 230 (374)
|++++|+|.+....+ .+..+.+.+||++|++||++...... ..+.+.+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998643111 22344445999999999999643211 11125678888777655432 589999
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEE--EecCCEEEEEEeCCCC----------CCCChHHHHH
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA--IRRASAHIIVLSSYSP----------YVKYTPQWWW 298 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ys--f~~g~v~fi~Ldt~~~----------~~~~~~Q~~W 298 (374)
++||||+........ ....|..+.... .....+|. +..|+++||+|||... .....+|++|
T Consensus 82 v~GNHD~~~~~~~~~--~~~~~~~y~~~~-----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~w 154 (256)
T cd07401 82 IRGNHDLFNIPSLDS--ENNYYRKYSATG-----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDR 154 (256)
T ss_pred eCCCCCcCCCCCccc--hhhHHHHhheec-----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHH
Confidence 999999853221111 111122211111 01122333 3458999999999642 1235899999
Q ss_pred HHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc
Q 017284 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~ 366 (374)
|+++|++. .+.+++||++|+|++..... .....+ .+.++|++++|+++||||.|.+++-.|+
T Consensus 155 L~~~L~~~--~~~~~~IV~~HhP~~~~~~~---~~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 155 LEKELEKS--TNSNYTIWFGHYPTSTIISP---SAKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhc--ccCCeEEEEEcccchhccCC---CcchhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 99999975 34568999999998653221 111222 3899999999999999999999985554
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=174.67 Aligned_cols=150 Identities=20% Similarity=0.242 Sum_probs=109.4
Q ss_pred cEEEEEecCCCCCCc-H----HHHHHH----HHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hcCCeEEc
Q 017284 162 YTFGIIGDLGQTYNS-L----STLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWS 231 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~----~~l~~~----~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~~P~~~v 231 (374)
|||+++||+|..... . ..++.+ .+.++|+||++||+++.... ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN-----DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC-----HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 689999999986431 1 222333 33489999999999964432 457888888888876 57999999
Q ss_pred CCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCC
Q 017284 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (374)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (374)
+||||. ++.+|+ ....+|++||+++|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEF----GPRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC---CC
Confidence 999993 122222 23579999999999984 34
Q ss_pred CeEEEEecccceecCCCCCCC-----CHHHHHHHHHHHHHc-CCcEEEEcCccccccccc
Q 017284 312 PWLIVLMHVPLYSSNVVHYME-----GESMRAVFESWFVHS-RVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 312 ~w~iv~~H~P~y~~~~~~~~~-----~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~ 365 (374)
+++||++|+|++......... .+..++.|.++++++ +|++||+||+|.+.+...
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 568999999998654322111 123456788999999 799999999999988765
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=178.95 Aligned_cols=192 Identities=16% Similarity=0.144 Sum_probs=118.5
Q ss_pred EECCCCCCCCCCcEEEEEecCCCCCC---------c----HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHH
Q 017284 150 FQTPPKIHPDAPYTFGIIGDLGQTYN---------S----LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDS 214 (374)
Q Consensus 150 F~T~p~~~~~~~~~f~v~gD~~~~~~---------~----~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~ 214 (374)
.+|++.. ..+++|++++|+|.... . ..+++.+++. +||+||++||++.... ...+..
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~~ 76 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQH 76 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHHH
Confidence 4565543 36899999999996321 1 1234444443 6999999999996322 334455
Q ss_pred HHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC---CC-
Q 017284 215 WGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---YV- 290 (374)
Q Consensus 215 ~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~---~~- 290 (374)
+.+.++.+ .+|+++++||||.... +...+... + ....++.+..++++||+|||... .+
T Consensus 77 ~~~~l~~l--~~Pv~~v~GNHD~~~~-----------~~~~~~~~--~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 77 FAEGIAPL--RKPCVWLPGNHDFQPA-----------MYSALQDA--G---ISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred HHHHHhhc--CCcEEEeCCCCCChHH-----------HHHHHhhc--C---CCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 55555544 5799999999997421 11111100 0 11123334445699999999642 12
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC-CCCCHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccC
Q 017284 291 KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH-YMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 291 ~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~-~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~ 368 (374)
.+.+|++||+++|++. +.+..||++|||+....... ........+.+.++++++ +|+++|+||+|..... ..+
T Consensus 139 l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--~~~ 213 (275)
T PRK11148 139 LSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL--DWN 213 (275)
T ss_pred eCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc--eEC
Confidence 3689999999999985 23345666666554433211 011112346889999998 8999999999986432 234
Q ss_pred Ccee
Q 017284 369 PFHF 372 (374)
Q Consensus 369 ~~h~ 372 (374)
|+.+
T Consensus 214 gi~~ 217 (275)
T PRK11148 214 GRRL 217 (275)
T ss_pred CEEE
Confidence 5443
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-19 Score=167.34 Aligned_cols=183 Identities=17% Similarity=0.196 Sum_probs=119.7
Q ss_pred HHHHHHHHHh--CCCeEEecccccccCCCCccc-cch--hhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCC----Ccc
Q 017284 177 LSTLKHYMQS--GGQSVLFLGDLSYADRYEYND-VGI--RWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG----EVI 247 (374)
Q Consensus 177 ~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~-~~~--~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~----~~~ 247 (374)
..+++.+.+. +|||||++||++..+...... ... .+..+.+.++.....+|+++++||||........ ...
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~ 135 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSW 135 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccH
Confidence 3456667776 899999999999765432111 011 2445556666666789999999999985321110 111
Q ss_pred cccccccccc--cCcCCC-CCCCCceEEEe-cCCEEEEEEeCCCCC-----------CCChHHHHHHHHHHhhccCCCCC
Q 017284 248 PFKSYLHRIA--TPYTAS-KSTNPLWYAIR-RASAHIIVLSSYSPY-----------VKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 248 ~~~~y~~~f~--~p~~~~-~~~~~~~ysf~-~g~v~fi~Ldt~~~~-----------~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
.+..+...|. +|..+. ....+.||++. .++++||+|||...+ .....|++||+++|+++++. ..
T Consensus 136 ~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~-~~ 214 (296)
T cd00842 136 LYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQA-GE 214 (296)
T ss_pred HHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHC-CC
Confidence 1222223332 232111 11346789998 788999999996421 12478999999999997432 34
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCccccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~yeR~ 363 (374)
.++|++|+|+...... ......+.+.+++++|+ |.++|+||+|..+-.
T Consensus 215 ~v~I~~HiPp~~~~~~---~~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 215 KVWIIGHIPPGVNSYD---TLENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred eEEEEeccCCCCcccc---cchHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 5788899999764322 11356788999999997 778999999996554
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-19 Score=154.97 Aligned_cols=192 Identities=20% Similarity=0.185 Sum_probs=99.5
Q ss_pred cEEEEEecCCCCCCcH----HHHH-HHHHhCCCeEEecccccccCCCCccccchhhHHHH-HHHHHhhhcCCeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSL----STLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWG-RFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~----~~l~-~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~-~~~~~~~~~~P~~~v~GNH 235 (374)
+||+++||+|...... ..+. ...+.++|+||++||+++.... ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP-----SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH-----HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc-----cccchhhhccchhhhhcccccccccccc
Confidence 6999999999975433 2222 2333499999999999976543 11111111 1234445679999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 315 (374)
|............................ .... ........................+..|+...+....+...+++|
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 153 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYSY-FNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVI 153 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEECT-ESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEE
T ss_pred ccceecccccccccccccccccccccccc-Ccce-eeecccccccccccccccccccccchhccccccccccccccccee
Confidence 98632100000000000000000000000 0000 111112222222211111111222333333322222225678999
Q ss_pred EEecccceecCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 316 VLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 316 v~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
|++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 154 v~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 154 VFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred EEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999876543210 11346788999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.7e-18 Score=154.96 Aligned_cols=167 Identities=22% Similarity=0.263 Sum_probs=106.3
Q ss_pred HHHHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHH---HhhhcCCeEEcCCCcccccCCCCCCccccccccc
Q 017284 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIE---QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLH 254 (374)
Q Consensus 180 l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~---~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~ 254 (374)
+..+.+. +||+||++||++..+.. .. ..+|.+ +.++.+ +....+|++.++||||+...... .......|..
T Consensus 37 ~~~~~~~l~PD~vv~lGDL~d~G~~--~~-~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~-~~~~~~rf~~ 112 (257)
T cd08163 37 WRYMQKQLKPDSTIFLGDLFDGGRD--WA-DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGV-VLPVRQRFEK 112 (257)
T ss_pred HHHHHHhcCCCEEEEecccccCCee--Cc-HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCC-CHHHHHHHHH
Confidence 3334443 89999999999864321 11 345543 333333 22224799999999998543211 1112234555
Q ss_pred ccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC
Q 017284 255 RIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH 329 (374)
Q Consensus 255 ~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~ 329 (374)
+|. ...++|++|+++||+|||..-. ....+|.+||++.|+.. .....+||++|+|+|......
T Consensus 113 ~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~~ 180 (257)
T cd08163 113 YFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNTS 180 (257)
T ss_pred HhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCCC
Confidence 552 2358999999999999996321 23467999999999874 233458999999999653211
Q ss_pred CC------------CCHH----H-HHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 330 YM------------EGES----M-RAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 330 ~~------------~~~~----~-r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
.+ .+.. + .+.-..||.+.++.+||+||+|.|=.
T Consensus 181 cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~ 230 (257)
T cd08163 181 CGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCE 230 (257)
T ss_pred CCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccce
Confidence 10 0100 1 23445778888999999999999854
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.9e-17 Score=143.92 Aligned_cols=150 Identities=19% Similarity=0.240 Sum_probs=98.1
Q ss_pred CcEEEEEecCCCCCCc---------HHH---HHHHH-HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cC
Q 017284 161 PYTFGIIGDLGQTYNS---------LST---LKHYM-QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~---------~~~---l~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~ 226 (374)
.+||++++|+|..... ..+ +.++. +.+||+||++||+++..... ...+..+.+.++++.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~----~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTN----DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCc----hHHHHHHHHHHHHHHHcCC
Confidence 5899999999986432 122 33333 33899999999999754431 1123455555565543 69
Q ss_pred CeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhc
Q 017284 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKV 306 (374)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 306 (374)
|+++++||||.. -.....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~--------------------------------------------------g~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY--------------------------------------------------DWIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC--------------------------------------------------CCCCHHHHHHHHHHHHHH
Confidence 999999999910 013468999999999986
Q ss_pred c--CCCCCeEEEEecccceecCCC---------CCCC---CHHHHH-HHHHHHHHcCCcEEEEcCcccccccc
Q 017284 307 D--REKTPWLIVLMHVPLYSSNVV---------HYME---GESMRA-VFESWFVHSRVDFIFAGHVHAYERSV 364 (374)
Q Consensus 307 ~--~~~~~w~iv~~H~P~y~~~~~---------~~~~---~~~~r~-~l~~ll~~~~VdlvlsGH~H~yeR~~ 364 (374)
. +....+.++++|+|+...... ...+ ...... .+..+.+..+|+++|+||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 3 234568999999998653210 0001 011122 33444566789999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-17 Score=147.95 Aligned_cols=182 Identities=17% Similarity=0.139 Sum_probs=111.9
Q ss_pred EEEecCCCCC--------Cc---HHHHHHHHHh------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 165 GIIGDLGQTY--------NS---LSTLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 165 ~v~gD~~~~~--------~~---~~~l~~~~~~------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
.+++|+|... -. .+.++.+.+. +||+||++||+++... ........+.++.+ ..|
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~------~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK------LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC------hHHHHHHHHHHHhC--CCC
Confidence 4689998762 11 3445555554 9999999999984321 11122222333332 347
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC----CC-------------C
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS----PY-------------V 290 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~----~~-------------~ 290 (374)
+++|+||||+... . ...+.+.+. ..+. ......++.++++.|++++... .+ .
T Consensus 74 v~~V~GNHD~~~~----~---~~~~~~~l~--~~~~--~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYWWG----S---ASKLRKALE--ESRL--ALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCccccCC----C---HHHHHHHHH--hcCe--EEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 8999999997311 0 011111111 0000 0001234566789999976311 11 0
Q ss_pred CChHHHHHHHHHHhhccCC-CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc---
Q 017284 291 KYTPQWWWLREELKKVDRE-KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM--- 366 (374)
Q Consensus 291 ~~~~Q~~WL~~~L~~~~~~-~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~--- 366 (374)
....|++||++.|+++... ...++|+++|+|++.... . .+.+..++++++++++|+||+|.+++..|+
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~----~----~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~ 214 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG----D----DSPISKLIEEYGVDICVYGHLHGVGRDRAINGE 214 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC----C----HHHHHHHHHHcCCCEEEECCCCCCcccccccce
Confidence 1256899999999985322 224789999999876432 1 235678889999999999999999988776
Q ss_pred cCCceec
Q 017284 367 SFPFHFF 373 (374)
Q Consensus 367 ~~~~h~~ 373 (374)
.+|++|+
T Consensus 215 ~~gi~~~ 221 (232)
T cd07393 215 RGGIRYQ 221 (232)
T ss_pred ECCEEEE
Confidence 7888765
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-16 Score=149.09 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=72.2
Q ss_pred CCceEEEe-cCCEEEEEEeCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC-----CCCHH
Q 017284 267 NPLWYAIR-RASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-----MEGES 335 (374)
Q Consensus 267 ~~~~ysf~-~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-----~~~~~ 335 (374)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999997431 2368999999999997 3456899999999987543110 01112
Q ss_pred HHHHHHHHHHHc-CCcEEEEcCccccccc
Q 017284 336 MRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (374)
Q Consensus 336 ~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 363 (374)
..++|.++|.++ +|.++|+||.|....+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999998 7999999999987643
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=133.22 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=101.4
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCC
Q 017284 164 FGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNM 243 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~ 243 (374)
++++||+|........ ..+.+.++|+||++||++.... ......+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~------~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~-- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGG------KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL-- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCC------HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH--
Confidence 5789999986533222 2344458999999999996432 1111111 22322 257999999999964210
Q ss_pred CCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC------CCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 017284 244 GEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------YVKYTPQWWWLREELKKVDREKTPWLIVL 317 (374)
Q Consensus 244 ~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~------~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~ 317 (374)
......... ..+ ..+.++++.|+++++... .....+|++|+ +.|+. ...+.+|++
T Consensus 69 ------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 69 ------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 000000000 011 235578899999987421 12356889998 45543 344568999
Q ss_pred ecccceecCCCC-CCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 318 MHVPLYSSNVVH-YMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 318 ~H~P~y~~~~~~-~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
+|+|++...... ......-.+.+..++++++++++|+||+|.-..
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~ 175 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESRG 175 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEeccccccc
Confidence 999997631111 111011245788889999999999999999643
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=137.38 Aligned_cols=186 Identities=13% Similarity=0.081 Sum_probs=108.5
Q ss_pred EEEEEecCCCCCCc---HH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNS---LS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~---~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
||++++|+|..... .. .+..+.+.++|+||++||++... . +...+.+.+... ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~-------~-~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF-------Q-RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch-------h-hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999975322 22 33344555999999999999521 1 112333333332 458999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC--------------------------
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-------------------------- 289 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-------------------------- 289 (374)
|...... +..+...+. + ....+.++.+..++++|++++...++
T Consensus 72 D~~~~~~------~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741111 111111110 0 00122333344467888888832111
Q ss_pred C-----CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCC------CCCCCC--HHHHHHHHHHHHHcCCcEEEEcC
Q 017284 290 V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV------VHYMEG--ESMRAVFESWFVHSRVDFIFAGH 356 (374)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~------~~~~~~--~~~r~~l~~ll~~~~VdlvlsGH 356 (374)
. ...+|++||++.|++. ....+||++|+|+..... ..+... ......+.+++++++|+++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~---~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQL---DNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhc---CCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 1 1257899999999875 223478889998865221 111110 11136788999999999999999
Q ss_pred cccccccccccCCcee
Q 017284 357 VHAYERSVRMSFPFHF 372 (374)
Q Consensus 357 ~H~yeR~~~~~~~~h~ 372 (374)
+|.-.... ..+++.+
T Consensus 218 ~H~~~~~~-~i~~~~~ 232 (239)
T TIGR03729 218 LHRRFGPL-TIGGTTY 232 (239)
T ss_pred ccCCCCCE-EECCEEE
Confidence 99965322 2255544
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.3e-15 Score=137.13 Aligned_cols=179 Identities=19% Similarity=0.180 Sum_probs=111.8
Q ss_pred cEEEEEecCCCC--CC-cHHH----HHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 162 YTFGIIGDLGQT--YN-SLST----LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~--~~-~~~~----l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
++|++++|.|.. .. .... ++.+...+||+||++||++.. +. ...+....++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 489999999998 22 2223 344444589999999999975 22 33334455555544456789999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEec-CCEEEEEEeCCCCC----CCChHHHHHHHHHHhhccCC
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY----VKYTPQWWWLREELKKVDRE 309 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~-g~v~fi~Ldt~~~~----~~~~~Q~~WL~~~L~~~~~~ 309 (374)
||..... ...+...+.... ..+-.... ++++++.+|+.... ..+..|++||++.|++....
T Consensus 75 HD~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVVN-------GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCchH-------HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 9985311 111211111110 11111112 67899999996542 24789999999999985322
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCcccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAY 360 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 360 (374)
....+|+++|+|+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112457777777665443322222223346667888888 999999999986
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-14 Score=122.96 Aligned_cols=145 Identities=15% Similarity=0.256 Sum_probs=87.4
Q ss_pred EEEEecCCCCCCcHHHH--HHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 164 FGIIGDLGQTYNSLSTL--KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l--~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
|+++||+|......... ..+.+.++|+++++||+++... . ..+...........|++.++||||...
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~------~---~~~~~~~~~~~~~~~v~~v~GNHD~~~-- 69 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD------A---PRFAPLLLALKGFEPVIYVPGNHEFYV-- 69 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc------h---HHHHHHHHhhcCCccEEEeCCCcceEE--
Confidence 57899999875432221 1223348999999999996432 1 122222333345689999999999731
Q ss_pred CCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 017284 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P 321 (374)
+| . ....|+.+.. ...++.+|+.++++ +.+||++|+|
T Consensus 70 -------------~~--~------G~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 70 -------------RI--I------GTTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred -------------EE--E------eeecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 00 0 0012332211 12345555555544 3579999999
Q ss_pred ceecCCCC----CCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 322 LYSSNVVH----YMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 322 ~y~~~~~~----~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
++...... .......++.+..++++.+|+++++||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 98754321 111224456677888899999999999998743
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.7e-14 Score=125.72 Aligned_cols=186 Identities=13% Similarity=0.084 Sum_probs=103.8
Q ss_pred EEEEEecCCCCCCc------------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hc
Q 017284 163 TFGIIGDLGQTYNS------------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AY 225 (374)
Q Consensus 163 ~f~v~gD~~~~~~~------------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~ 225 (374)
||++++|+|.+... ..++++ +.+.++|+||++||++...... ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----HHHHHHHHHHHHHHHHCC
Confidence 68999999987421 122333 3344999999999998644311 234455666666654 47
Q ss_pred CCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhh
Q 017284 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (374)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 305 (374)
+|+++++||||....... ......+....... ............++.+++.|++++..... ....+.++++..+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998542110 00000011000000 00000112233344556888888654321 123344444555544
Q ss_pred ccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 306 ~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
. .....+|++.|.|+.......... .......+...++|++++||.|....
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 3 345678999999986543221110 12333455678899999999999653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.2e-13 Score=121.70 Aligned_cols=176 Identities=11% Similarity=0.129 Sum_probs=101.4
Q ss_pred CcEEEEEecCCCCCCcHHHH-HHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l-~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~~ 238 (374)
..|++++||+|......+.+ +.+.+.++|+||++||+++.... . +.+.++++.+.. ..|+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~-----~---~~~~~~l~~l~~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAK-----S---EDYAAFFRILGEAHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCC-----H---HHHHHHHHHHHhcCCceEEEcCCCChH
Confidence 56899999999754333322 22333489999999999964311 1 334444444433 47999999999963
Q ss_pred cCCCCCCcccccccccccccCcCCCCCCCCceEEEec-CCEEEEEEeCCCCC--CCChHHH----HHHHHH-HhhccCCC
Q 017284 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY--VKYTPQW----WWLREE-LKKVDREK 310 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~-g~v~fi~Ldt~~~~--~~~~~Q~----~WL~~~-L~~~~~~~ 310 (374)
...... ..|......|.. .. ..+.+ ..+ |++.|+.|+....+ ...++|. +||.+. |+...+..
T Consensus 76 v~~~l~-----~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 76 LWEYLR-----EAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred HHHHHH-----HHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 100000 011100001110 00 11122 334 55999999875433 2344542 665442 22221123
Q ss_pred CCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 311 ~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.+..|+++|+|+|..+..|. -.+.+..++++++..+++|||+|
T Consensus 147 ~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 147 DYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 45689999999998743231 23467788999999999999988
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=7e-14 Score=117.04 Aligned_cols=116 Identities=21% Similarity=0.226 Sum_probs=82.9
Q ss_pred EEEEecCCCCCCcHH-----------HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc-CCeEEc
Q 017284 164 FGIIGDLGQTYNSLS-----------TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWS 231 (374)
Q Consensus 164 f~v~gD~~~~~~~~~-----------~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~-~P~~~v 231 (374)
|++++|+|.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 122333449999999999997532 34566677777776544 699999
Q ss_pred CCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCC
Q 017284 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (374)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (374)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999994
Q ss_pred CeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 312 ~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
|+++|+|++...... ......++.+.+++.+++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSG-RERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccc-cccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 888899997654321 111114567899999999999999999996543
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=123.40 Aligned_cols=169 Identities=15% Similarity=0.011 Sum_probs=100.6
Q ss_pred CcEEEEEecCCCCCCc-----HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 161 PYTFGIIGDLGQTYNS-----LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~-----~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
++||++++|+|..... ...++.+.+.+||+|+++||+++.... .. +.+.+.++.+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~-----~~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVD-----VL--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcch-----hh--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987532 223344445599999999999964332 11 34555666666678999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 315 (374)
|....... .+........+. -..+.+..++.++..+....-.. ......++.+.+++. .+.+..|
T Consensus 74 D~~~~~~~----~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDEE----NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCchH----HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCC--CCCCCEE
Confidence 98542110 000011100111 01233455666654444332111 122334666677654 3456789
Q ss_pred EEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccC
Q 017284 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 316 v~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
++.|.|.+.. .+.+.++|++++||+|..+...|...
T Consensus 139 ~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~ 174 (223)
T cd07385 139 LLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIG 174 (223)
T ss_pred EEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccc
Confidence 9999875321 11567899999999999887665443
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.5e-13 Score=128.32 Aligned_cols=93 Identities=18% Similarity=0.309 Sum_probs=65.3
Q ss_pred CCceEEEe-cCCE--EEEEEeCCCC---------C--CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC---
Q 017284 267 NPLWYAIR-RASA--HIIVLSSYSP---------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH--- 329 (374)
Q Consensus 267 ~~~~ysf~-~g~v--~fi~Ldt~~~---------~--~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~--- 329 (374)
+..||+|+ .|++ ++|+|||... + ....+|++||+++|+.+.. +.+++|+++|+|+.+.....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 44699999 5855 9999998641 1 1358999999999998632 56788888888877522211
Q ss_pred CC----------CCHHHHHHHHHHHHHc-CCcEEEEcCcccc
Q 017284 330 YM----------EGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (374)
Q Consensus 330 ~~----------~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 360 (374)
+. .+...-.+|..+|.+| +|.++||||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 00 0011123788999999 5889999999963
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-12 Score=117.87 Aligned_cols=165 Identities=15% Similarity=0.123 Sum_probs=93.9
Q ss_pred CCcEEEEEecCCCCCC-cHH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 160 APYTFGIIGDLGQTYN-SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~-~~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
.++|++++||+|.... ... .++.+++.+||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+||
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~GN 121 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFGN 121 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecCC
Confidence 4799999999998632 122 233444459999999999986221 12235566677777767899999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCC--EEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~--v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
||+...... ...+...+. ..+..-..+....+..++ +.++.+|.... +... ..+.++ +..
T Consensus 122 HD~~~~~~~-----~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~-----~~~ 183 (271)
T PRK11340 122 HDRPVGTEK-----NHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASE-----ANL 183 (271)
T ss_pred CCcccCccc-----hHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcC-----CCC
Confidence 997532110 011111110 000001223444555543 56677753211 1101 111222 134
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~ 365 (374)
.+|++.|.|-+- +.+.+.++||+||||+|.-+-..|
T Consensus 184 ~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP 219 (271)
T PRK11340 184 PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVP 219 (271)
T ss_pred CeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEcc
Confidence 578899999531 123467899999999998654433
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-12 Score=104.11 Aligned_cols=117 Identities=22% Similarity=0.223 Sum_probs=83.3
Q ss_pred EEEecCCCCCCcHHHHH---HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 165 GIIGDLGQTYNSLSTLK---HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 165 ~v~gD~~~~~~~~~~l~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
+++||+|.......... ...+.++|+||++||+++.... ..+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPD------PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCC------chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998865443332 3333499999999999985442 222333223334456789999999999
Q ss_pred CCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 017284 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P 321 (374)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8889999
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccc
Q 017284 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 322 ~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~ 365 (374)
++.............++.+..++.+.+++++|+||.|.+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 97765432222222577888999999999999999999998763
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-12 Score=114.77 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=102.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHH----HhCCCeEEecccccccCCCCc-----------------cc---cchhhHHHH--
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYM----QSGGQSVLFLGDLSYADRYEY-----------------ND---VGIRWDSWG-- 216 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~----~~~~d~vl~~GD~~y~~~~~~-----------------~~---~~~~w~~~~-- 216 (374)
||++.||.+...........+. +.++|++|++||.+|++.... .. +...+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999888766656666665 569999999999999886321 01 111111111
Q ss_pred HHHHHhhhcCCeEEcCCCcccccCCCCCC-------c------ccccccccccccCcCCCC--CCCCceEEEecCCE-EE
Q 017284 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGE-------V------IPFKSYLHRIATPYTASK--STNPLWYAIRRASA-HI 280 (374)
Q Consensus 217 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~-------~------~~~~~y~~~f~~p~~~~~--~~~~~~ysf~~g~v-~f 280 (374)
..++.+.+.+|++.+|+|||+..+..... . ....+|...+..+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 22566778899999999999975432210 0 012234444433332222 34678999999995 99
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCc--EEEEcCcc
Q 017284 281 IVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD--FIFAGHVH 358 (374)
Q Consensus 281 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H 358 (374)
++||+...- .++......|+.+..++.+.++. ++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999997642 23334455677777776555443 78899999
Q ss_pred ccc
Q 017284 359 AYE 361 (374)
Q Consensus 359 ~ye 361 (374)
.-+
T Consensus 203 ~~~ 205 (228)
T cd07389 203 LAE 205 (228)
T ss_pred HHH
Confidence 743
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.6e-11 Score=110.05 Aligned_cols=200 Identities=20% Similarity=0.260 Sum_probs=108.9
Q ss_pred CCCcEEEEEecCCCCCC-----------------c---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYN-----------------S---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR 217 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-----------------~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~ 217 (374)
+++||++.++|+|.+.. . .+.+.++.+. +||+|+++||+++.... +..-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t-----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST-----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc-----HhHHHHHHH
Confidence 46899999999998643 1 1224444444 99999999999986332 222244566
Q ss_pred HHHHhh-hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC--CC-CCCceEEEecCC----------------
Q 017284 218 FIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--KS-TNPLWYAIRRAS---------------- 277 (374)
Q Consensus 218 ~~~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~--~~-~~~~~ysf~~g~---------------- 277 (374)
.++|.. .++||.+++||||-...-..-+ ...+.. .+|..-+ .. .+..+--..+|+
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr~q---l~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTRLQ---LMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCHHH---HHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 677654 6899999999999753210000 000000 0111100 00 000110111111
Q ss_pred --EEEEEEeCCCC---------CC-CChHHHHHHHHHHhhc---cCCCCC-eEEEEecccce--ecCCCC------CCCC
Q 017284 278 --AHIIVLSSYSP---------YV-KYTPQWWWLREELKKV---DREKTP-WLIVLMHVPLY--SSNVVH------YMEG 333 (374)
Q Consensus 278 --v~fi~Ldt~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~iv~~H~P~y--~~~~~~------~~~~ 333 (374)
..+++||+..+ |+ ..+.|..||+..-.+- +..-.| --++++|.|+- ..-... ..++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 23455666331 11 2468999999887331 111123 45788899983 221110 0111
Q ss_pred ---HHHHHHHHHHHH-HcCCcEEEEcCcccccccccccC
Q 017284 334 ---ESMRAVFESWFV-HSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 334 ---~~~r~~l~~ll~-~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
......+...|. ..+|+.||+||+|...--.+.++
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~ 319 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKG 319 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEeccccccceecccCC
Confidence 112335566666 77899999999999766555554
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.3e-11 Score=99.74 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=73.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCC
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPN 242 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~ 242 (374)
||+++||+|.... .+...++|+++++||++.... ...++.+.+.++.+. ..+++.++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~--- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL--- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC---
Confidence 5899999997654 222348999999999985322 222334444444332 123578999999521
Q ss_pred CCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccc
Q 017284 243 MGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPL 322 (374)
Q Consensus 243 ~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~ 322 (374)
. . . .+.|+++|.|+
T Consensus 65 -------~-------------------------------------------------------~--~--~~~ilv~H~~p 78 (135)
T cd07379 65 -------D-------------------------------------------------------P--E--DTDILVTHGPP 78 (135)
T ss_pred -------C-------------------------------------------------------C--C--CCEEEEECCCC
Confidence 0 1 1 24688889999
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 323 YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 323 y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+............-.+.+.+++.+.+++++++||+|...
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 79 YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 765432111111112456667788999999999999974
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=100.81 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=66.5
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHh---hhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS---AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~ 263 (374)
+||+|+++||+++.+.... ..+|.+..+.+.++ ...+|++.++||||+..... .....-.+||.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~---~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~----~~~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIAN---DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE----DPIESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCCC---HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC----CcCHHHHHHHH------
Confidence 9999999999997654321 33343333223333 24689999999999863210 00011112221
Q ss_pred CCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHH
Q 017284 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESW 343 (374)
Q Consensus 264 ~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l 343 (374)
+. | |++.|.|+..... ..+..+
T Consensus 109 -------------------------------------~~----------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -------------------------------------KY----------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -------------------------------------Hh----------h-eeeeccccccccc----------HHHHHH
Confidence 00 1 8899999875432 156678
Q ss_pred HHHcCCcEEEEcCcccccc
Q 017284 344 FVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 344 l~~~~VdlvlsGH~H~yeR 362 (374)
+.+++++++|+||.|.+..
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~ 149 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSI 149 (195)
T ss_pred HHhcCceEEEEcCccceee
Confidence 8899999999999999754
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.8e-10 Score=102.18 Aligned_cols=178 Identities=15% Similarity=0.144 Sum_probs=90.6
Q ss_pred cEEEEEecCCCCCCcHH----HHHHHHH--hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc-CCeEEcCCC
Q 017284 162 YTFGIIGDLGQTYNSLS----TLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~----~l~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~-~P~~~v~GN 234 (374)
+|++++||+|.+..... .++.+.. .++|.|+++||++......... ........+.++.+... +|++.++||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GN 79 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGN 79 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 47899999998754322 2233322 3899999999999532111000 11223445556666544 899999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
||.... ..+.+...... -.....++.++.++++.-... +......++++.+.+.. +|.
T Consensus 80 HD~~~~---------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~------~~~ 137 (241)
T PRK05340 80 RDFLLG---------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRN------PWL 137 (241)
T ss_pred Cchhhh---------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhC------HHH
Confidence 997421 11111111000 011234566676666553321 11123444444444433 122
Q ss_pred EEEecccceecCC------------CCC-CC---CHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 315 IVLMHVPLYSSNV------------VHY-ME---GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 315 iv~~H~P~y~~~~------------~~~-~~---~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..++|.+++.... ... .. .....+.+.+++.+++++++++||+|.-..
T Consensus 138 ~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 138 QWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 2223333321100 000 00 000124577888899999999999998654
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-10 Score=96.32 Aligned_cols=130 Identities=20% Similarity=0.249 Sum_probs=74.4
Q ss_pred cEEEEEecCCCCCCcH-HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccC
Q 017284 162 YTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~-~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~ 240 (374)
+||+++||+|...... +.++.+ +++|+|+++||++.. .++.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~~- 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNWA- 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHSTH-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCccccc-
Confidence 5899999999964432 233333 479999999999841 3344444443 8999999999531
Q ss_pred CCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecc
Q 017284 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320 (374)
Q Consensus 241 ~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~ 320 (374)
+...... .. +.+.+.. .-....|+++|.
T Consensus 62 -----------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 62 -----------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp -----------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred -----------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEECC
Confidence 1110000 00 1111110 112467888898
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCcee
Q 017284 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHF 372 (374)
Q Consensus 321 P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~ 372 (374)
+.+.... ..+.+..++...+++++++||.|...... .++.++
T Consensus 90 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--~~~~~~ 131 (156)
T PF12850_consen 90 HPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--IGGIHV 131 (156)
T ss_dssp TSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--ETTEEE
T ss_pred CCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--ECCEEE
Confidence 7665321 12345677789999999999999976654 444444
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-09 Score=95.73 Aligned_cols=64 Identities=23% Similarity=0.308 Sum_probs=43.3
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccccc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~ 239 (374)
+|++++||+|..... .....+.+.+||+|+++||++.. . ....+.+..+ ..|++.+.||||...
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~--------~---~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE--------S---VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC--------h---HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999975432 22334445599999999999831 1 1223333322 369999999999854
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=101.20 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=59.6
Q ss_pred CCCCCCCCCCcEEEEEecCCCCCCcH---HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCe
Q 017284 152 TPPKIHPDAPYTFGIIGDLGQTYNSL---STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (374)
Q Consensus 152 T~p~~~~~~~~~f~v~gD~~~~~~~~---~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~ 228 (374)
++.......+++++.++|.|...... +.+.++....||+|+++||++.... ...+..+...++++.+..++
T Consensus 35 ~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~~gv 108 (284)
T COG1408 35 TPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAPLGV 108 (284)
T ss_pred cCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhccCCE
Confidence 33333334688999999999876542 2233444447899999999997411 23446777888889899999
Q ss_pred EEcCCCccccc
Q 017284 229 IWSAGNHEIEF 239 (374)
Q Consensus 229 ~~v~GNHD~~~ 239 (374)
++++||||+..
T Consensus 109 ~av~GNHd~~~ 119 (284)
T COG1408 109 FAVLGNHDYGV 119 (284)
T ss_pred EEEeccccccc
Confidence 99999999863
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.6e-09 Score=88.91 Aligned_cols=50 Identities=18% Similarity=0.100 Sum_probs=33.1
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSV 364 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 364 (374)
+|+++|+|++....... ....-.+.+.+++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 57888888864332110 011124567788889999999999999865554
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=89.63 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=102.7
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHH--HHHhh-hcCCeEEcCCCcc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRF--IEQSA-AYQPWIWSAGNHE 236 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~--~~~~~-~~~P~~~v~GNHD 236 (374)
.+|++.++|.|........+..+.+. ++|+++.+||++|..-.+.. .-.+. ++.+. ..+|+++++||-|
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-------~~~~~~~~e~l~~~~~~v~avpGNcD 75 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-------VAEELNKLEALKELGIPVLAVPGNCD 75 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-------HHHhhhHHHHHHhcCCeEEEEcCCCC
Confidence 67999999999987655555444444 89999999999943322111 11111 34444 5789999999988
Q ss_pred cccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC--CC----CCChHH-HHHHHHHHhhccCC
Q 017284 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS--PY----VKYTPQ-WWWLREELKKVDRE 309 (374)
Q Consensus 237 ~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~--~~----~~~~~Q-~~WL~~~L~~~~~~ 309 (374)
-..-. ..... .... .. + -..+.|++.|+.+.-.. .+ ...+++ +.-|++-+.+++
T Consensus 76 ~~~v~--------~~l~~-~~~~-----v~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-- 136 (226)
T COG2129 76 PPEVI--------DVLKN-AGVN-----VH-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-- 136 (226)
T ss_pred hHHHH--------HHHHh-cccc-----cc-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--
Confidence 53210 00000 0000 00 1 45777888888744311 11 122333 233444444432
Q ss_pred CCCeEEEEecccceecCCCCCCCC--HHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEG--ESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~--~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..-+|+++|.|+|.+...- ..+ ..-.+.+.+++++.++-+.+|||+|-+.-
T Consensus 137 -~~~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 137 -NPVNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred -CcceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 1122899999999876541 122 22345777889999999999999998543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.3e-09 Score=93.38 Aligned_cols=178 Identities=17% Similarity=0.186 Sum_probs=84.2
Q ss_pred CcEEEEEecCCCCCCcHHHHH-HHHHhCCCeEEecccccccCCCCccccchhhH--------------------------
Q 017284 161 PYTFGIIGDLGQTYNSLSTLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWD-------------------------- 213 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~-~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~-------------------------- 213 (374)
+-+++.++|.+......+.+. .+.+.++|.|+++||+.-.... ...|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~-----~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEAR-----SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHH-----HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchh-----hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 347899999887544433333 3344499999999999853221 22333
Q ss_pred HHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC-C---
Q 017284 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP-Y--- 289 (374)
Q Consensus 214 ~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~-~--- 289 (374)
.|++.+.. ..+|.+++|||||-....... .+|....-.|.-- .-...+.+.-|...++.+..+-. .
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceecccee---eeeeeecccCCcEEEEecCccccCCCcc
Confidence 33443332 368999999999962100000 1111111111100 00112334445577777765311 0
Q ss_pred ---CC--ChHHHHHHHHHHhhccCCCCCeEEEEecccc-eecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 290 ---VK--YTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ---~~--~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
.. ......|..+.|..+ +..-+|+++|.|+ +..+..|. -.+.+..++++++.++|++||+|--.
T Consensus 150 ~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 00 112345555666664 2345788899999 44332222 12467789999999999999999743
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.01 E-value=9e-10 Score=94.86 Aligned_cols=49 Identities=31% Similarity=0.511 Sum_probs=32.7
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-------hcCCeEEcCCCcccc
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-------AYQPWIWSAGNHEIE 238 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-------~~~P~~~v~GNHD~~ 238 (374)
+||+||++||++...... + ...|.+..+.+..+. ..+|++.++||||+.
T Consensus 45 ~pd~vi~lGDl~d~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIA--D-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred CCCEEEEeccccCCcEeC--C-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 999999999999643321 1 234544433333332 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.5e-09 Score=89.81 Aligned_cols=50 Identities=22% Similarity=0.362 Sum_probs=33.1
Q ss_pred hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh---hcCCeEEcCCCcccc
Q 017284 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA---AYQPWIWSAGNHEIE 238 (374)
Q Consensus 186 ~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~---~~~P~~~v~GNHD~~ 238 (374)
.+||+|+++||++...... . ...|..+...+.... ...|++.++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3999999999999643321 1 234544433333332 247999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.5e-09 Score=92.80 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=34.3
Q ss_pred HHHHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHHHhh-------------------hcCCeEEcCCCcccc
Q 017284 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA-------------------AYQPWIWSAGNHEIE 238 (374)
Q Consensus 180 l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~-------------------~~~P~~~v~GNHD~~ 238 (374)
+..+... +||.|+++||+... +.- . +.+|.+ +.|+.+-+. ..+|++.++||||+.
T Consensus 36 ~~~~~~~l~Pd~V~fLGDLfd~-~w~-~--D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG 111 (193)
T cd08164 36 VSMMQFWLKPDAVVVLGDLFSS-QWI-D--DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVG 111 (193)
T ss_pred HHHHHHhcCCCEEEEeccccCC-Ccc-c--HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCC
Confidence 3444444 99999999999954 221 1 334432 223322221 148999999999986
Q ss_pred c
Q 017284 239 F 239 (374)
Q Consensus 239 ~ 239 (374)
.
T Consensus 112 ~ 112 (193)
T cd08164 112 Y 112 (193)
T ss_pred C
Confidence 4
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.8e-08 Score=90.24 Aligned_cols=184 Identities=14% Similarity=0.077 Sum_probs=92.3
Q ss_pred cEEEEEecCCCCC------CcHH----HHHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTY------NSLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~------~~~~----~l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~ 230 (374)
++|++++|+|... .... .++++.+.++| +++.+||++....... ........+.+.. --.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~---~~~~~~~~~~l~~---~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST---ATKGEANIELMNA---LGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh---ccCCcHHHHHHHh---cCCCEE
Confidence 5899999999553 2232 34445555788 7799999986433211 0011222222322 224567
Q ss_pred cCCCcccccCCCCCCcccccccccccccCc-------CC---CCCCCCceEEEecCCE--EEEEEeCCCCCC--------
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------TA---SKSTNPLWYAIRRASA--HIIVLSSYSPYV-------- 290 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~-------~~---~~~~~~~~ysf~~g~v--~fi~Ldt~~~~~-------- 290 (374)
++||||+..... .+.........|. .+ .......|.-++.+++ -|+.+.+.....
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999864321 1111111111110 00 0011234556777874 555554422100
Q ss_pred --CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccC
Q 017284 291 --KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 291 --~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
......+.+++..+. .+.+...+|++.|.+... ...+...+ .++|+||+||.|.........+
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~~~~~~~ 214 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLEEPEVVN 214 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccCCCcccC
Confidence 011223334332222 225678899999977532 01111111 5899999999999765433445
Q ss_pred Cce
Q 017284 369 PFH 371 (374)
Q Consensus 369 ~~h 371 (374)
++.
T Consensus 215 ~~~ 217 (252)
T cd00845 215 GTL 217 (252)
T ss_pred CEE
Confidence 544
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.8e-08 Score=83.68 Aligned_cols=61 Identities=16% Similarity=0.073 Sum_probs=41.5
Q ss_pred cEEEEEecCCCCCCcHHHH-HHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSLSTL-KHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l-~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||+|......+.+ +.+... ++|.|+++||++. ....+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------------~~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------------PFVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------------HHHHHHHHHh--CCceEEEccCCCc
Confidence 4899999999765443333 334444 8999999999981 1222333322 3589999999995
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.6e-08 Score=81.85 Aligned_cols=158 Identities=22% Similarity=0.200 Sum_probs=85.0
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCC
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKST 266 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~ 266 (374)
.-|.|++.||++.+...+++. .=++++..+-. + -+.+.||||+.... . +..++. +|.. .
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~------~Dl~~i~~LPG-~-K~m~rGNHDYWw~s-~------skl~n~--lp~~----l 101 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAE------EDLRFIGDLPG-T-KYMIRGNHDYWWSS-I------SKLNNA--LPPI----L 101 (230)
T ss_pred hhhEEEecccchhheechhhh------hhhhhhhcCCC-c-EEEEecCCccccch-H------HHHHhh--cCch----H
Confidence 458999999999876653221 11344444322 2 36699999996431 1 111110 1100 0
Q ss_pred CCceEEEecCCEEEEEEe---CC-CCCCCChHH--------HHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCH
Q 017284 267 NPLWYAIRRASAHIIVLS---SY-SPYVKYTPQ--------WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGE 334 (374)
Q Consensus 267 ~~~~ysf~~g~v~fi~Ld---t~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~ 334 (374)
--..-.|.+++.-++..- +. .++....+| ..-|+..+.++-++...-.||+.|.|+++..... +
T Consensus 102 ~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~---~- 177 (230)
T COG1768 102 FYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP---G- 177 (230)
T ss_pred hhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC---c-
Confidence 000012455554444432 21 122223333 3334442223223455668999999998765432 1
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCcccccc---cccccCCceec
Q 017284 335 SMRAVFESWFVHSRVDFIFAGHVHAYER---SVRMSFPFHFF 373 (374)
Q Consensus 335 ~~r~~l~~ll~~~~VdlvlsGH~H~yeR---~~~~~~~~h~~ 373 (374)
.+.+++++++|+.++.||.|--.| ....-.|+++.
T Consensus 178 ----~~sevlee~rv~~~lyGHlHgv~~p~~~~s~v~Gi~y~ 215 (230)
T COG1768 178 ----PFSEVLEEGRVSKCLYGHLHGVPRPNIGFSNVRGIEYM 215 (230)
T ss_pred ----chHHHHhhcceeeEEeeeccCCCCCCCCcccccCceEE
Confidence 456788899999999999999775 23333355553
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.7e-08 Score=86.44 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=45.9
Q ss_pred EEEecCCCCCCcH----HHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCccc
Q 017284 165 GIIGDLGQTYNSL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEI 237 (374)
Q Consensus 165 ~v~gD~~~~~~~~----~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~ 237 (374)
+++||+|.+.... ..++.+.+. +||+|+++||++......... ....+.+.+.++.+.. ..|++.++||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~-~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDP-STLARSVAQAIRQVSDQGVPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCC-CHHHHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 5789999875422 234444443 799999999999631110000 1122344555666654 4899999999997
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 4
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=93.65 Aligned_cols=177 Identities=18% Similarity=0.204 Sum_probs=100.5
Q ss_pred HHHHHHHHh--CCCeEEecccccccCCCCccccchhh---HHHHHHHHHhhhcCCeEEcCCCcccccCCCCC--C--cc-
Q 017284 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRW---DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG--E--VI- 247 (374)
Q Consensus 178 ~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w---~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~--~--~~- 247 (374)
.+|.+|.++ ++|||+++||++-.+...... +... ....+.+......+|++++.||||......+. . ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 456677776 599999999999654322111 1111 12233345556689999999999985321110 0 00
Q ss_pred ----cccccccccc--cCcCCC-CCCCCceEEE-ecCCEEEEEEeCCCCC----------CCChHHHHHHHHHHhhccCC
Q 017284 248 ----PFKSYLHRIA--TPYTAS-KSTNPLWYAI-RRASAHIIVLSSYSPY----------VKYTPQWWWLREELKKVDRE 309 (374)
Q Consensus 248 ----~~~~y~~~f~--~p~~~~-~~~~~~~ysf-~~g~v~fi~Ldt~~~~----------~~~~~Q~~WL~~~L~~~~~~ 309 (374)
.|..+...|. +|.... ....+.+|.- ..++.++|+||+..-+ .....|++|+..+|.+++.
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~- 356 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES- 356 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh-
Confidence 0011111121 232211 1233455554 4578999999995421 1246789999999998753
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCccccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYE 361 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~ye 361 (374)
+..-+=++.|.|+-.. ... +.-...+-.++.++. +...|.||.|.-+
T Consensus 357 ~GekVhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 357 AGEKVHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred cCCEEEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 3444667789997431 111 122234445555553 3456999999855
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.1e-08 Score=83.09 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=39.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
|++++||+|... ..+.++.+. ++|.|+++||++..... . . +....|++.+.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~----~-------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL-----N----E-------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc-----c----h-------hhcCCcEEEEeCCCCC
Confidence 589999999764 333433333 49999999999864321 1 1 2345689999999996
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.8e-07 Score=81.62 Aligned_cols=186 Identities=17% Similarity=0.130 Sum_probs=98.6
Q ss_pred EEEEecCCCCCCc-HHHHHHHHHh---CCCeEEecccccccCCCCccc---c---chhhHHHHHHHHHhh-hcCCeEEcC
Q 017284 164 FGIIGDLGQTYNS-LSTLKHYMQS---GGQSVLFLGDLSYADRYEYND---V---GIRWDSWGRFIEQSA-AYQPWIWSA 232 (374)
Q Consensus 164 f~v~gD~~~~~~~-~~~l~~~~~~---~~d~vl~~GD~~y~~~~~~~~---~---~~~w~~~~~~~~~~~-~~~P~~~v~ 232 (374)
|+|.||+|..... ...+..+.+. ++|++|++||+.........+ . ...+..|.+.++... ..+|++.+.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 5789999985322 1223344332 799999999996322111000 0 012333444443322 457789999
Q ss_pred CCcccccCCCCCCcccccccccccccCcCCCCCCCCce-----EEEecCCEEEEEEeCCC---CCC--------CChHHH
Q 017284 233 GNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW-----YAIRRASAHIIVLSSYS---PYV--------KYTPQW 296 (374)
Q Consensus 233 GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~-----ysf~~g~v~fi~Ldt~~---~~~--------~~~~Q~ 296 (374)
||||... .+.+ ++..+ ....+.+ ..+++++++|..|.... ++. ....++
T Consensus 81 GNHE~~~-----------~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASN-----------YLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHH-----------HHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 9999521 0110 11100 0012222 24567889999987622 111 112333
Q ss_pred HHHH-------HHHhhccCCCCCeEEEEecccceecCCCCCCC---------------CHHHHHHHHHHHHHcCCcEEEE
Q 017284 297 WWLR-------EELKKVDREKTPWLIVLMHVPLYSSNVVHYME---------------GESMRAVFESWFVHSRVDFIFA 354 (374)
Q Consensus 297 ~WL~-------~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~---------------~~~~r~~l~~ll~~~~Vdlvls 354 (374)
..+. ..|... +.+-=|++.|.|+.......... +..-...+..++++.+...+|+
T Consensus 146 rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 3211 112221 11224888999997653321100 0011246778999999999999
Q ss_pred cCccc-cccccccc
Q 017284 355 GHVHA-YERSVRMS 367 (374)
Q Consensus 355 GH~H~-yeR~~~~~ 367 (374)
||.|. |++..|-.
T Consensus 223 gH~H~~f~~~~~~~ 236 (262)
T cd00844 223 AHLHVKFAALVPHE 236 (262)
T ss_pred ecCCcccceecCCc
Confidence 99999 78775543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-06 Score=81.49 Aligned_cols=186 Identities=15% Similarity=0.083 Sum_probs=89.7
Q ss_pred cEEEEEecCCCCC-------------CcHH----HHHHHHHhCCCeEEe-cccccccCCCCccc---cchhhHHHHHHHH
Q 017284 162 YTFGIIGDLGQTY-------------NSLS----TLKHYMQSGGQSVLF-LGDLSYADRYEYND---VGIRWDSWGRFIE 220 (374)
Q Consensus 162 ~~f~v~gD~~~~~-------------~~~~----~l~~~~~~~~d~vl~-~GD~~y~~~~~~~~---~~~~w~~~~~~~~ 220 (374)
++|++++|+|... .... .++++.+.+++.+++ +||++......... .........+.++
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 4788888887642 1122 233444447887776 99998643210000 0000112233333
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcC-------C-CCCCCCceEEEecC-CEE--EEEEeCCCC-
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A-SKSTNPLWYAIRRA-SAH--IIVLSSYSP- 288 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~-------~-~~~~~~~~ysf~~g-~v~--fi~Ldt~~~- 288 (374)
.+ . +-+.++||||+..... .+.........|.- . .......|.-++.+ +++ ||.+-+...
T Consensus 81 ~~--g-~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 81 AL--G-YDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred hc--C-CCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 32 2 3366789999864321 11111111111110 0 00112346667888 754 555444210
Q ss_pred -C-----------CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEc
Q 017284 289 -Y-----------VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAG 355 (374)
Q Consensus 289 -~-----------~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsG 355 (374)
+ ....+..++..++|++ .++..+|+++|.+........ ...+. ....+.++ .+||++|+|
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~~~~---~~~~la~~~~~vD~IlgG 225 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LTGEN---AAYELAEEVPGIDAILTG 225 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cCCcc---HHHHHHhcCCCCcEEEeC
Confidence 0 0011234444555544 467889999998765432100 11111 12233344 589999999
Q ss_pred Ccccccc
Q 017284 356 HVHAYER 362 (374)
Q Consensus 356 H~H~yeR 362 (374)
|.|....
T Consensus 226 HsH~~~~ 232 (277)
T cd07410 226 HQHRRFP 232 (277)
T ss_pred CCccccc
Confidence 9998543
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.4e-07 Score=82.01 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=87.7
Q ss_pred cEEEEEecCCCCC-------CcHHH----HHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeE
Q 017284 162 YTFGIIGDLGQTY-------NSLST----LKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (374)
Q Consensus 162 ~~f~v~gD~~~~~-------~~~~~----l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~ 229 (374)
++++++.|.|.-. ..... ++++.+.+++ ++|.+||++...... . ..+.....+.++.+ . .-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l--~-~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL--G-VDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc--C-CcE
Confidence 4778888887311 11223 3344444677 899999998533211 0 01112223333322 1 236
Q ss_pred EcCCCcccccCCCCCCcccccccccccccCcC-------C---CCCCCCceEEEecCC--EEEEEEeCCCCC--------
Q 017284 230 WSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A---SKSTNPLWYAIRRAS--AHIIVLSSYSPY-------- 289 (374)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~-------~---~~~~~~~~ysf~~g~--v~fi~Ldt~~~~-------- 289 (374)
.++||||+..+.. .+.........|.- . ....-..|.-++.++ +-||.+.+....
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 6899999864321 01111111111110 0 001124677888888 456666553211
Q ss_pred C-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 290 V-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
+ ....-.+.+++.+++..+.++.-+|++.|.+... .. .+.++ .++|++|+||.|...
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0 0122233444444333335788899999986421 11 22223 479999999999865
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=85.15 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=30.5
Q ss_pred CCcEEEEEecCCCCCC---------cHHHHHH----HHHhCCCeEEecccccccCC
Q 017284 160 APYTFGIIGDLGQTYN---------SLSTLKH----YMQSGGQSVLFLGDLSYADR 202 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~---------~~~~l~~----~~~~~~d~vl~~GD~~y~~~ 202 (374)
..+||++++|+|.+.. ...++.+ +.+.++|+||++||+.....
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 3689999999998632 1223333 33449999999999996543
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.3e-06 Score=74.13 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCCcH---HHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSL---STLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~---~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+++++||+|.+.... ..+.++.+ .++|.|+|+||++.. ...+.++.+ ..|++.|.||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~-------------~~~~~l~~~--~~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK-------------ETYDYLKTI--APDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH-------------HHHHHHHhh--CCceEEEECCCCc
Confidence 478999999554322 22333444 379999999999841 112233332 2379999999995
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.8e-07 Score=82.37 Aligned_cols=184 Identities=12% Similarity=0.027 Sum_probs=87.7
Q ss_pred EEEecCCCCCCcH---HHHHHHHH----hCCCeEEecccccccCCCCccccchhhHH-HHHHHHHhhhcCCeEEcCCCcc
Q 017284 165 GIIGDLGQTYNSL---STLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSAAYQPWIWSAGNHE 236 (374)
Q Consensus 165 ~v~gD~~~~~~~~---~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~~~~P~~~v~GNHD 236 (374)
+++||+|.+.... .......+ .++|.++++||++................ +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 3689999875432 22233322 38999999999995322111110111112 2344444556789999999999
Q ss_pred cccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhcc------CCC
Q 017284 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVD------REK 310 (374)
Q Consensus 237 ~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~------~~~ 310 (374)
..... .+........ .......+.+++.+++++-... +........|+...+.... ..-
T Consensus 81 ~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (217)
T cd07398 81 FLLGD---------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYDQLLFLNRP 145 (217)
T ss_pred HHHHh---------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHHHHHHhcch
Confidence 85321 0100000000 0111114667777777775533 2233344445544322100 000
Q ss_pred CCeEEEEecccceec----CCCC--CCCCHHHHHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 311 TPWLIVLMHVPLYSS----NVVH--YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 311 ~~w~iv~~H~P~y~~----~~~~--~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
..|..-........+ .... ........+.+..++.+++++++++||+|.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 146 LNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000000000000 0000 0011223456667788899999999999986543
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.2e-06 Score=82.08 Aligned_cols=74 Identities=18% Similarity=0.087 Sum_probs=45.9
Q ss_pred cEEEEEecCCCCCCc---------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHH-HHHHhh-hcC
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGR-FIEQSA-AYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~-~~~~~~-~~~ 226 (374)
+||+++||+|.+... ...+.+ +.+.++|+||++||+........ ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~---~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAIT---QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCC---HHHHHHHHHHHHHHHHHCCC
Confidence 589999999987321 123333 33459999999999985432211 111111222 233343 368
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.6e-06 Score=79.71 Aligned_cols=190 Identities=11% Similarity=0.081 Sum_probs=90.4
Q ss_pred cEEEEEecCCCCCC-------cHHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTYN-------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~~-------~~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~ 230 (374)
++++.++|+|.... ....+. ++.+.+.++++.+||++..... .. ........+.+..+ .+-+ .
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~--~~-~~~g~~~~~~ln~~--g~d~-~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI--SD-LDKGETIIKIMNAV--GYDA-V 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh--hh-hcCCcHHHHHHHhc--CCcE-E
Confidence 47899999986421 233333 3322256899999999853221 00 01111222223221 2334 5
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCC-------CC-CCCceEEEecC-C--EEEEEEeCCCC-C----C----
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-------KS-TNPLWYAIRRA-S--AHIIVLSSYSP-Y----V---- 290 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~-------~~-~~~~~ysf~~g-~--v~fi~Ldt~~~-~----~---- 290 (374)
++||||+++... .+....+.+..|.-.. +. .-..|.-++.+ + +-||.+-+... . .
T Consensus 75 ~~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 789999864321 1111222222222100 00 11234555677 6 56676665321 0 0
Q ss_pred C-ChHHHHHHHHH-HhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccc-ccc
Q 017284 291 K-YTPQWWWLREE-LKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSV-RMS 367 (374)
Q Consensus 291 ~-~~~Q~~WL~~~-L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~-~~~ 367 (374)
. ...-.+-+++. .....+.++.-+|++.|.+...... ... ...+.. .-.++|++|.||.|...... ...
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~----~~~--~~~la~--~~~giDvIigGH~H~~~~~~~~~~ 221 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS----PWT--STELAA--NVTGIDLIIDGHSHTTIEIGKKDG 221 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC----Ccc--HHHHHH--hCCCceEEEeCCCcccccCccccc
Confidence 0 01112223333 2222225788899999987654311 111 112222 12479999999999965543 233
Q ss_pred CCc
Q 017284 368 FPF 370 (374)
Q Consensus 368 ~~~ 370 (374)
+++
T Consensus 222 ~~~ 224 (257)
T cd07408 222 NNV 224 (257)
T ss_pred CCe
Confidence 444
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.8e-07 Score=87.84 Aligned_cols=74 Identities=18% Similarity=0.045 Sum_probs=50.2
Q ss_pred cEEEEEecCCCCC-C--c-------H----HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hcC
Q 017284 162 YTFGIIGDLGQTY-N--S-------L----STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~-~--~-------~----~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~~ 226 (374)
+||++.+|+|.+. . . . ..+..+.+.++||||++||+......+ . ..-..+.+.++.+. ..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps-~---~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS-P---RALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC-H---HHHHHHHHHHHHhccCCC
Confidence 5899999999982 1 1 1 233444555999999999999754332 1 12234455555554 479
Q ss_pred CeEEcCCCccccc
Q 017284 227 PWIWSAGNHEIEF 239 (374)
Q Consensus 227 P~~~v~GNHD~~~ 239 (374)
|++++.||||...
T Consensus 77 pv~~I~GNHD~~~ 89 (390)
T COG0420 77 PVVVIAGNHDSPS 89 (390)
T ss_pred cEEEecCCCCchh
Confidence 9999999999753
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.9e-06 Score=79.61 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=76.6
Q ss_pred HHHHHHh-CCCeE-EecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccc
Q 017284 180 LKHYMQS-GGQSV-LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA 257 (374)
Q Consensus 180 l~~~~~~-~~d~v-l~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~ 257 (374)
++++.+. ++|.+ +.+||+....... . ........+.++ .+++.++.||||++.... .+....+.+.
T Consensus 42 v~~~~~~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~~~~l~----~~g~da~~GNHefd~g~~-----~l~~~~~~~~ 109 (264)
T cd07411 42 IKRIRAERNPNTLLLDGGDTWQGSGEA--L-YTRGQAMVDALN----ALGVDAMVGHWEFTYGPE-----RVRELFGRLN 109 (264)
T ss_pred HHHHHHhcCCCeEEEeCCCccCCChHH--h-hcCChhHHHHHH----hhCCeEEecccccccCHH-----HHHHHHhhCC
Confidence 3445555 78877 5799999543210 0 111122223332 356665559999864321 1111111111
Q ss_pred cCcCCC--------CCCCCceEEEecCC--EEEEEEeCCCCCC----------CChHHHHHHHHHHhhcc-CCCCCeEEE
Q 017284 258 TPYTAS--------KSTNPLWYAIRRAS--AHIIVLSSYSPYV----------KYTPQWWWLREELKKVD-REKTPWLIV 316 (374)
Q Consensus 258 ~p~~~~--------~~~~~~~ysf~~g~--v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~-~~~~~w~iv 316 (374)
.|.-.. ......|.-++.++ +.||.+.+..... ......+.+++.+++.. ..+...+|+
T Consensus 110 ~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~ 189 (264)
T cd07411 110 WPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVL 189 (264)
T ss_pred CCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 121000 00112355667887 5566666532100 01233445555433321 256788999
Q ss_pred EecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 317 LMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 317 ~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
+.|-+... .. .+.++ .+||++|+||.|..
T Consensus 190 l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 190 LSHNGLPV--------DV-------ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred EecCCchh--------hH-------HHHhcCCCCcEEEeCccccc
Confidence 99976421 01 12222 57999999999974
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.4e-06 Score=78.68 Aligned_cols=155 Identities=16% Similarity=0.116 Sum_probs=77.5
Q ss_pred HHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccC
Q 017284 181 KHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATP 259 (374)
Q Consensus 181 ~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p 259 (374)
+++.+.+++ +++.+||+........ ..+.....+.++.+ .+- +.++||||+++... .+..+.+....|
T Consensus 42 ~~~r~~~~~~l~ld~GD~~~gs~~~~---~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~p 110 (281)
T cd07409 42 KELRAENPNVLFLNAGDAFQGTLWYT---LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKFP 110 (281)
T ss_pred HHHHhcCCCEEEEeCCCCCCCcchhh---hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 334434666 5666999986432211 11112222333322 233 45779999975421 111111111112
Q ss_pred cCCC-----------CCCCCceEEEecCC--EEEEEEeCCCCC-------C-CChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 260 YTAS-----------KSTNPLWYAIRRAS--AHIIVLSSYSPY-------V-KYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 260 ~~~~-----------~~~~~~~ysf~~g~--v~fi~Ldt~~~~-------~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
.-.. ...-..|.-++.++ +-||.+-+.... + ...+..+.+++.+++.+..++.-+|++.
T Consensus 111 ~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~ 190 (281)
T cd07409 111 VLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALS 190 (281)
T ss_pred EEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1100 00123456677888 556666553210 0 0123345566666665435688899999
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
|...-. . . .+.++ .++|++++||.|..-
T Consensus 191 H~G~~~-----------d-~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 191 HSGYEV-----------D-K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred ccCchh-----------H-H---HHHHcCCCCcEEEeCCcCccc
Confidence 965310 1 1 22223 479999999999953
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.5e-06 Score=77.53 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=48.1
Q ss_pred ceEEEecCC--EEEEEEeCCCC-C--------C-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHH
Q 017284 269 LWYAIRRAS--AHIIVLSSYSP-Y--------V-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336 (374)
Q Consensus 269 ~~ysf~~g~--v~fi~Ldt~~~-~--------~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~ 336 (374)
.|.-++.++ +-||.+-+... . + ....-.+-+++.+++.+..++.-+|++.|........... .+..
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cccc
Confidence 455577888 55666643210 0 0 0122233455544444325688899999987643221110 0011
Q ss_pred HHHHHHHHHH--cCCcEEEEcCcccccc
Q 017284 337 RAVFESWFVH--SRVDFIFAGHVHAYER 362 (374)
Q Consensus 337 r~~l~~ll~~--~~VdlvlsGH~H~yeR 362 (374)
......++.+ -++|++|+||.|....
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 1122333444 4799999999998654
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.9e-05 Score=70.96 Aligned_cols=180 Identities=13% Similarity=0.121 Sum_probs=91.7
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||.=..... ...+.++.+. ++|++|..||.+-....- . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl----~---~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGI----T---PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCC----C---HHHHHHHHhc--CCC-EEEecccccC
Confidence 57889998554332 2334455444 899999999998643111 1 2222223222 233 4466999986
Q ss_pred cCCCCCCccccccccccc---ccCcCCC-CCCCCceEEEecCCEEE--EEEeCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 017284 239 FMPNMGEVIPFKSYLHRI---ATPYTAS-KSTNPLWYAIRRASAHI--IVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f---~~p~~~~-~~~~~~~ysf~~g~v~f--i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
.. +. ..+.... -.|.+-+ ......|.-++.+++++ |.|-+.........-.+-+++.+++.+. +++
T Consensus 71 ~g----el---~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK----EI---LDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc----hH---HHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 11 1111111 1111111 11233467778887554 4443221111111123345566655432 678
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccccc-CCcee
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS-FPFHF 372 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~-~~~h~ 372 (374)
.+||.+|.-.. .+ ...+.. ....+||+++.||+|..---..+. +|..|
T Consensus 143 ~IIV~~H~g~t---------sE--k~ala~-~ldg~VdvIvGtHTHv~t~d~~il~~gTa~ 191 (255)
T cd07382 143 IIFVDFHAEAT---------SE--KIALGW-YLDGRVSAVVGTHTHVQTADERILPGGTAY 191 (255)
T ss_pred EEEEEECCCCC---------HH--HHHHHH-hCCCCceEEEeCCCCccCCccEEeeCCeEE
Confidence 89999996321 11 112221 223469999999999964444333 55544
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.6e-06 Score=78.14 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=48.1
Q ss_pred cEEEEEecCCCCCCc---------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-c-C
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-Y-Q 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~-~ 226 (374)
+||++++|+|.+... ...+++ +.+.++|+||++||+....... ......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~----~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPP----AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCC----HHHHHHHHHHHHHHHhcCCc
Confidence 589999999986421 122333 3344899999999999644321 1122334555665543 3 8
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.6e-06 Score=78.28 Aligned_cols=115 Identities=18% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCCcEEEEEecCCCCCCc-----HHHH---------HH---HHHh--CCCeEEecccccccCCCCccccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYNS-----LSTL---------KH---YMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~-----~~~l---------~~---~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
+..+|++.++|.|.-++. ...+ .+ +... +||.++++||+..++..- + +++|.+..+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~-~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--G-DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--C-hHHHHHHHHHH
Confidence 468999999999976421 0111 11 1111 999999999999744322 1 45564433223
Q ss_pred HHhh---hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC
Q 017284 220 EQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS 287 (374)
Q Consensus 220 ~~~~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~ 287 (374)
+.+. ..+|.+.++||||+++.... -.....||.-- .++...+|+.|+..|+++|++.
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~~------fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFESV------FGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HHhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHHh------hcchhhhhccCCceeEEeeehh
Confidence 3332 47899999999999753211 11222333211 1235567999999999999965
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.8e-05 Score=87.44 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=94.4
Q ss_pred CCCcEEEEEecCCCCCCcHH----HHHHHHHhCCCeEEe-cccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCC
Q 017284 159 DAPYTFGIIGDLGQTYNSLS----TLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~----~l~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~G 233 (374)
...++|++++|+|....... .++++.+.+++.+++ +||++..... .. ...+....+.+..+ -.-+.++|
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~--~~-~~~g~~~~~~ln~l---g~d~~~~G 731 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY--SN-LLKGLPVLKMMKEM---GYDASTFG 731 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch--hh-hcCChHHHHHHhCc---CCCEEEec
Confidence 34699999999996543333 334444558887765 9999853321 00 11112222333322 23366999
Q ss_pred CcccccCCCC-----CCcc---cccccc-ccccc-------CcCC-CCCCCCceEEEecCC--EEEEEEeCCCC-C----
Q 017284 234 NHEIEFMPNM-----GEVI---PFKSYL-HRIAT-------PYTA-SKSTNPLWYAIRRAS--AHIIVLSSYSP-Y---- 289 (374)
Q Consensus 234 NHD~~~~~~~-----~~~~---~~~~y~-~~f~~-------p~~~-~~~~~~~~ysf~~g~--v~fi~Ldt~~~-~---- 289 (374)
|||++.+... .+.. .-..|. ..|.+ ...+ .......|.-++.++ +-||.+-+... .
T Consensus 732 NHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p 811 (1163)
T PRK09419 732 NHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSP 811 (1163)
T ss_pred ccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCC
Confidence 9998654210 0000 000010 00110 0000 001123466667887 55677655321 0
Q ss_pred C-----CChHHHHHHHHHHhhcc-CCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCccccc
Q 017284 290 V-----KYTPQWWWLREELKKVD-REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~-~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 361 (374)
. ......+.+++..++.+ ..++.-+|++.|......... .++ ....+.++. +||++|.||.|..-
T Consensus 812 ~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 812 GNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 01222334444444432 256888999999876432111 111 122344433 79999999999853
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00012 Score=68.09 Aligned_cols=184 Identities=14% Similarity=0.148 Sum_probs=90.1
Q ss_pred CCcEEEEEecCCCCCC----------c----HHHHHHHHH----hCCC-eEEecccccccCCCCccccchhhHHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYN----------S----LSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~----------~----~~~l~~~~~----~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~ 220 (374)
.+++|++.+|+|.... . ...++++.+ .+++ ++|..||.+........ ....+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~-~~~~g~~~~~~mN 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDA-SPPPGSYSNPIFR 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceee-ecCCChHHHHHHH
Confidence 4789999999996421 1 122233322 2455 66789999964322110 0012233333333
Q ss_pred HhhhcCCe-EEcCCCcccccCCCCCCcccccccccccccCcC--------CCCC---CCCceEEEecC-C--EEEEEEeC
Q 017284 221 QSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT--------ASKS---TNPLWYAIRRA-S--AHIIVLSS 285 (374)
Q Consensus 221 ~~~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~--------~~~~---~~~~~ysf~~g-~--v~fi~Ldt 285 (374)
.+++ ..++||||++..... ...+..+......|.- +.+. ....|.-++.+ + +-||.+-+
T Consensus 83 ----~mgyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 83 ----MMPYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred ----hcCCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 3333 468999999632210 0000011111111110 0000 11235666765 6 45666655
Q ss_pred CCCC--C-----CC--hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCc-EEEE
Q 017284 286 YSPY--V-----KY--TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FIFA 354 (374)
Q Consensus 286 ~~~~--~-----~~--~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vd-lvls 354 (374)
...- . .. ..+.+|+.+.|++ .++.-+|++.|...-... + ..+....+.++. ++| ++|+
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~ 225 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLG 225 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEe
Confidence 3210 0 01 2333588888875 468889999998764221 1 111112233333 567 7999
Q ss_pred cCccccc
Q 017284 355 GHVHAYE 361 (374)
Q Consensus 355 GH~H~ye 361 (374)
||.|...
T Consensus 226 GHsH~~~ 232 (282)
T cd07407 226 GHSHVRD 232 (282)
T ss_pred CCccccc
Confidence 9999743
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.9e-05 Score=79.37 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=51.2
Q ss_pred CCCcEEEEEecCCCCCCcH--H---H-HHHHH---------HhCCCeEEecccccccCCC-Cccc-------cchhhHHH
Q 017284 159 DAPYTFGIIGDLGQTYNSL--S---T-LKHYM---------QSGGQSVLFLGDLSYADRY-EYND-------VGIRWDSW 215 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~--~---~-l~~~~---------~~~~d~vl~~GD~~y~~~~-~~~~-------~~~~w~~~ 215 (374)
..+.+++++||+|.+.... . . ++.+. ..+++.+|++||++...+. +..+ ...+.+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 3578999999999775421 1 1 22233 3478999999999964221 1100 01122345
Q ss_pred HHHHHHhhhcCCeEEcCCCcccc
Q 017284 216 GRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 216 ~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.++++.+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 55666666788999999999974
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=3e-05 Score=72.40 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=30.3
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|.......... ........+...+...++|++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 467889999998875322110 010111223333323589999999999865
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.1e-05 Score=76.37 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=99.9
Q ss_pred CCCCCcEEEEEecCCCCCC------------cHHH----HHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHH
Q 017284 157 HPDAPYTFGIIGDLGQTYN------------SLST----LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 157 ~~~~~~~f~v~gD~~~~~~------------~~~~----l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
.....++|++..|+|..-. .... ++++.+. +..++|.+||++........ ......-.+.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~--~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY--LTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc--ccCCChHHHHH
Confidence 3356899999999987533 2222 2333333 44688999999965332111 11222223333
Q ss_pred HHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCc---------CCCCCCCCceEEEecCC--EEEEEEeCCC-
Q 017284 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY---------TASKSTNPLWYAIRRAS--AHIIVLSSYS- 287 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~---------~~~~~~~~~~ysf~~g~--v~fi~Ldt~~- 287 (374)
..+. .=..+.||||+.+... .+..+......|. .........|.-++.++ +-+|.+.+..
T Consensus 100 N~m~---yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NALG---YDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhcC---CcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 3321 2256999999975421 0111111111121 00111234678888888 5567766521
Q ss_pred -CC---C-----CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 288 -PY---V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 288 -~~---~-----~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.+ . ......+++++.+.+.+..+..-+|++.|.+........... +....... .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~~-----~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVAV-----PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-cccccccc-----cCcceEeccCCc
Confidence 11 1 123456677777766543447889999999876543321110 00010001 449999999999
Q ss_pred cc
Q 017284 359 AY 360 (374)
Q Consensus 359 ~y 360 (374)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 63
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.4e-06 Score=70.35 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=27.6
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
++|.|+++||++..... ..+.+.++.+ ..|++.++||||..
T Consensus 42 ~~d~vi~~GDl~~~~~~---------~~~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 42 PDDTVYHLGDFSFGGKA---------GTELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCEEEEeCCCCCCCCh---------HHHHHHHHhC--CCCeEEEeCCCCch
Confidence 78999999999964321 1112333332 35899999999964
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.3e-06 Score=73.77 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=38.9
Q ss_pred EEecCCCCCCcHHHHHHHHH------------hCCCeEEecccccccCCCCccccchhhHHHHHHHHHh-----hhcCCe
Q 017284 166 IIGDLGQTYNSLSTLKHYMQ------------SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS-----AAYQPW 228 (374)
Q Consensus 166 v~gD~~~~~~~~~~l~~~~~------------~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~-----~~~~P~ 228 (374)
++||+|.... .+.++.+ .+.|.++++||++..... . .+..+.+..+ ....++
T Consensus 2 vi~DIHG~~~---~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~-----~---~~vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 2 AIGDLHGDLD---AFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD-----V---IEILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred EEeCccCCHH---HHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC-----H---HHHHHHHHHHHHHHHhcCCeE
Confidence 6899998644 3333322 257899999999964321 1 2233333322 234689
Q ss_pred EEcCCCcccc
Q 017284 229 IWSAGNHEIE 238 (374)
Q Consensus 229 ~~v~GNHD~~ 238 (374)
+.+.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.3e-05 Score=78.53 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=46.1
Q ss_pred cEEEEEecCCCCCCc---------HHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCC
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQP 227 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P 227 (374)
+||++++|+|.+... ...+. .+.+.+||+||++||+...... . ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p-~---~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP-P---SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC-c---HHHHHHHHHHHHHHHhcCCc
Confidence 589999999986321 01122 2334599999999999854321 1 1111223444444433 589
Q ss_pred eEEcCCCcccc
Q 017284 228 WIWSAGNHEIE 238 (374)
Q Consensus 228 ~~~v~GNHD~~ 238 (374)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.5e-05 Score=65.38 Aligned_cols=63 Identities=19% Similarity=0.112 Sum_probs=41.8
Q ss_pred cEEEEEecCCCCCCc-HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+++++||+|..... ....+.....++|+|||+||.+..... ..+... -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~---------~~l~~~-----~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL---------DALEGG-----LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch---------HHhhcc-----cccceEEEEccCCCc
Confidence 589999999997642 222233333499999999999963321 111110 135899999999974
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00049 Score=63.15 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=92.5
Q ss_pred cEEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=....- ...+..+.+. ++||+|..||++-....- . ....+.+. ...+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi----~---~~~~~~L~--~~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGL----T---LKIYEFLK--QSGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCC----C---HHHHHHHH--hcCCCEE-Eccchhc
Confidence 479999998543211 2334455554 899999999998532110 1 12222222 1245555 4599999
Q ss_pred ccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC-CCC-C--ChHHHHHHHHHHhhccCCCCCe
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS-PYV-K--YTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
+..................+.|... .+..|..++.++..+-+++-.. .+. . ...-.+-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~~---pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTSF---AGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCCC---CCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 6431000000000011111222211 2334566777876655555421 111 1 1111223444444432 24778
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~ 366 (374)
+||.+|.-. +.. +.....+.+.+|++|+.-|.|.-.--.++
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i 187 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI 187 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCccee
Confidence 999999432 222 44566777889999999999996444333
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.9e-05 Score=68.75 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||+|......+ .++.+.+.++|.++++||++...............+..+.++.+ ..+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcch
Confidence 48999999996543222 23334445899999999998532210000000112223333322 35899999999963
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00013 Score=74.46 Aligned_cols=193 Identities=16% Similarity=0.106 Sum_probs=88.1
Q ss_pred CCCcEEEEEecCCCCCC-------cHHH----HHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHh
Q 017284 159 DAPYTFGIIGDLGQTYN-------SLST----LKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-------~~~~----l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~ 222 (374)
...++|++++|+|.... .... ++++.+. ++ -++|.+||+...... .. -.....-.+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~--s~-~~~g~~~i~~mN~~ 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLI 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh--hh-hcCCchhHHHHhcC
Confidence 35799999999997532 2222 2333321 33 478899999853211 00 00111112222222
Q ss_pred hhcCCeEEcCCCcccccCCCC-C---CcccccccccccccCcCCCCCCCCceEEEecCC--EEEEEEeCCCC--C-----
Q 017284 223 AAYQPWIWSAGNHEIEFMPNM-G---EVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSP--Y----- 289 (374)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~-~---~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~--v~fi~Ldt~~~--~----- 289 (374)
.+- +.++||||++++... . ....|.-..........+. ..-..|.-++.++ +-||.+-+... +
T Consensus 109 --g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~-~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~ 184 (551)
T PRK09558 109 --GYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGE-RLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEY 184 (551)
T ss_pred --CCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCC-cccCCeEEEEECCEEEEEEEEeccccccccCCCC
Confidence 222 457899999764310 0 0001110000000000010 1123466678888 55666654221 0
Q ss_pred -C--CChHHHHHHHHHHhhccC-CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 290 -V--KYTPQWWWLREELKKVDR-EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 290 -~--~~~~Q~~WL~~~L~~~~~-~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
. ......+-+++..++.+. .+..-+|++.|.......... ...... ..+..-+...+||++|.||.|..
T Consensus 185 ~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~~d-~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 185 FTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAPGD-VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred cCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCccH-HHHHHhCCccCceEEEeCCCCcc
Confidence 0 011122223333333321 468889999998875322110 000000 12222222237999999999974
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=3.3e-05 Score=64.74 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=38.5
Q ss_pred EEEecCCCCCC-cHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHH-hhhcCCeEEcCCCcc
Q 017284 165 GIIGDLGQTYN-SLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ-SAAYQPWIWSAGNHE 236 (374)
Q Consensus 165 ~v~gD~~~~~~-~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~-~~~~~P~~~v~GNHD 236 (374)
+++||.+..-. ....++.+.+. ..|++|++||+.-.+.. . +.|...... ....+|.|.+-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~-----~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-----D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccc-----h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 36788876532 12333333333 78999999999853321 1 233333332 234679999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00026 Score=72.19 Aligned_cols=76 Identities=18% Similarity=0.115 Sum_probs=43.0
Q ss_pred CceEEEecCC--EEEEEEeCCCC-C---CCC-----hHHHHHHH---HHHhhccCCCCCeEEEEecccceecCCCCCCCC
Q 017284 268 PLWYAIRRAS--AHIIVLSSYSP-Y---VKY-----TPQWWWLR---EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEG 333 (374)
Q Consensus 268 ~~~ysf~~g~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~ 333 (374)
..|.-++.++ +-||.|.+... . ... ....+=++ ++|++ .+..-+|++.|..... .
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~~--------d 197 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFEK--------N 197 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcHH--------H
Confidence 3466677887 67888865211 0 000 11111122 34443 5678899999964310 0
Q ss_pred HHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 334 ESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 334 ~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
..+.++ .+||++|+||.|..-
T Consensus 198 -------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 198 -------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -------HHHHhcCCCCCEEEeCCCCccc
Confidence 123333 379999999999953
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=5.5e-05 Score=65.17 Aligned_cols=49 Identities=22% Similarity=0.218 Sum_probs=31.4
Q ss_pred hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 186 ~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+||.++++||++....... ...+.... ........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~~~---~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGGLS---RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccccC---HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 49999999999996433211 11122211 233334578999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00031 Score=66.43 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=25.6
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 360 (374)
.+..-+|++.|..-+. .. ..+.++. ++|++|.||.|.+
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~ 244 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTL 244 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCcc
Confidence 5678899999963111 11 1234443 7999999999986
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00033 Score=65.20 Aligned_cols=176 Identities=20% Similarity=0.235 Sum_probs=98.0
Q ss_pred cEEEEEecCCCCCC-cHHHHHHHHHh---CCCeEEecccccccCCCCc-c--ccchhhHHHHHHHH----HhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTYN-SLSTLKHYMQS---GGQSVLFLGDLSYADRYEY-N--DVGIRWDSWGRFIE----QSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~~-~~~~l~~~~~~---~~d~vl~~GD~~y~~~~~~-~--~~~~~w~~~~~~~~----~~~~~~P~~~ 230 (374)
+|+||-||+|..-+ ...++..+.+. +.|++|++||+---.+... . .+...+.....+.. ...+.+|.+.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 48999999998643 34566666666 8999999999964222110 0 01222333333332 3346688999
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceE-----EEecCCEEEEEEeC---CCCCCCC----------
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY-----AIRRASAHIIVLSS---YSPYVKY---------- 292 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~y-----sf~~g~v~fi~Ldt---~~~~~~~---------- 292 (374)
+=||||.. +|. +.+|+.+= ...+.|| ..++|+|++-.|+. ..+|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999963 121 12333211 1234555 46789999998877 2222110
Q ss_pred -------hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHH-------H----------HHHHHHHHHHcC
Q 017284 293 -------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES-------M----------RAVFESWFVHSR 348 (374)
Q Consensus 293 -------~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~-------~----------r~~l~~ll~~~~ 348 (374)
-.+.+ ...|.+. +.+-=|.+.|-=+-.-. ++++... . ...+++||++-+
T Consensus 146 tiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 11111 1223332 23334666775332211 1111111 1 236778999999
Q ss_pred CcEEEEcCccc
Q 017284 349 VDFIFAGHVHA 359 (374)
Q Consensus 349 VdlvlsGH~H~ 359 (374)
...+|+.|.|+
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999998
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00016 Score=64.24 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=41.7
Q ss_pred EEecCCCCCCcH---HHHHH-HHHh--CCCeEEecccccccCCCCccccchhhHHHHH----HHHHhh-hcCCeEEcCCC
Q 017284 166 IIGDLGQTYNSL---STLKH-YMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR----FIEQSA-AYQPWIWSAGN 234 (374)
Q Consensus 166 v~gD~~~~~~~~---~~l~~-~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~----~~~~~~-~~~P~~~v~GN 234 (374)
.+||.|.+.... ..+.. +... +.|.+.++||++..-.. ...|.+.-+ .+..+. +..|++.+.||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g-----~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIG-----DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhc-----CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 589999984322 22333 3333 45999999999964332 223444332 223333 45899999999
Q ss_pred cccc
Q 017284 235 HEIE 238 (374)
Q Consensus 235 HD~~ 238 (374)
||.-
T Consensus 77 ~Dfl 80 (237)
T COG2908 77 HDFL 80 (237)
T ss_pred hHHH
Confidence 9974
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0012 Score=69.68 Aligned_cols=59 Identities=20% Similarity=0.145 Sum_probs=33.2
Q ss_pred HHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
+-+++...+.+..++.-+|++.|..+-........++ .. ..+..--+||+++.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--VG---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--hh---hHHhcCCCCCEEEECCCCCc
Confidence 3344444333325788899999987643211111111 11 12222357999999999994
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0025 Score=57.91 Aligned_cols=99 Identities=10% Similarity=0.083 Sum_probs=56.6
Q ss_pred ceEEEecCC--EEEEEEeCCCCCC----------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHH
Q 017284 269 LWYAIRRAS--AHIIVLSSYSPYV----------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336 (374)
Q Consensus 269 ~~ysf~~g~--v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~ 336 (374)
.+.-++.++ +.|+.+.+...-. ....-.+-+++.++++++ ++..+||+.|-..-... .....
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~ 195 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPE 195 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHH
Confidence 445567777 5666665532100 111123445666665532 48899999995432111 11122
Q ss_pred HHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
...+...+...++|+|+.||.|..+-. .+++++-+||
T Consensus 196 ~~~la~~l~~~G~D~IiG~H~Hv~q~~-E~~~~~~I~Y 232 (239)
T cd07381 196 QRELARALIDAGADLVIGHHPHVLQGI-EIYKGKLIFY 232 (239)
T ss_pred HHHHHHHHHHCCCCEEEcCCCCcCCCe-EEECCEEEEE
Confidence 335555556689999999999997543 4566666554
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00027 Score=64.02 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=41.7
Q ss_pred cEEEEEecCCCCCCcH-HHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNSL-STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~-~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
++++++||+|...... ..++.+... ..|.++++||++..... . . +.....++......+++.+.||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~-s---~---~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKR-S---K---DVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC-h---H---HHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 3789999999653322 233334332 25999999999964321 0 1 22222222222345789999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0015 Score=72.42 Aligned_cols=48 Identities=21% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|...-...... ..+ ....+|.++ -+||+++.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~--~~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS--GAE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC--Ccc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 578889999998864332111 111 122334434 479999999999964
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00043 Score=62.24 Aligned_cols=70 Identities=23% Similarity=0.399 Sum_probs=45.5
Q ss_pred cEEEEEecCCCCCCc--------------HHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 162 YTFGIIGDLGQTYNS--------------LSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~--------------~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
-+.++++|+|.+... .++++++.+ .+||.+|++||+...... ...|..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-----~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-----GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-----hHHHHHHHHHHHhc-
Confidence 468899999987421 134444433 389999999999964332 12344444445443
Q ss_pred hcCCeEEcCCCcccc
Q 017284 224 AYQPWIWSAGNHEIE 238 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (374)
..+++.+.||||..
T Consensus 89 -~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 -FRDLILIRGNHDAL 102 (225)
T ss_pred -CCcEEEECCCCCCc
Confidence 35899999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0037 Score=56.79 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=41.5
Q ss_pred HHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
+++.+++++ .++..+||+.|-..-.... -.... ..+...+.+.++|+|+.||.|..+.. .+++++-++|
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~----p~~~~-~~~A~~l~~~G~DvIiG~H~H~~~~~-e~~~~~~I~Y 230 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE----PTDEQ-RELAHALIDAGADVVIGHHPHVLQPI-EIYKGKLIAY 230 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC----CCHHH-HHHHHHHHHcCCCEEEcCCCCcCCce-EEECCEEEEE
Confidence 445555543 3588999999965421110 11222 34444455579999999999998644 3555655543
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00037 Score=63.15 Aligned_cols=68 Identities=26% Similarity=0.382 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCcHH-HHHHHH---Hh-------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYM---QS-------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWS 231 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~---~~-------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v 231 (374)
|++++||+|....... .++.+. +. +.|.++++||++..+.. -.+..+.+..+...-.++.+
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~--------s~evl~~l~~l~~~~~~~~v 73 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD--------SPEVLRLVMSMVAAGAALCV 73 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC--------HHHHHHHHHHHhhCCcEEEE
Confidence 7899999998654322 223321 00 25899999999964321 12333444444333467899
Q ss_pred CCCcccc
Q 017284 232 AGNHEIE 238 (374)
Q Consensus 232 ~GNHD~~ 238 (374)
.||||..
T Consensus 74 ~GNHE~~ 80 (234)
T cd07423 74 PGNHDNK 80 (234)
T ss_pred ECCcHHH
Confidence 9999963
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00037 Score=61.91 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH----h-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQ----S-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~----~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
|++++||+|... ..+.++.+ . ++|.++++||+++.... . .+ .++.+.. .+++.+.||||.
T Consensus 2 ri~~isDiHg~~---~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~-----~---~~---~~~~l~~-~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGHY---SLLQKALDAVGFDPARDRLISVGDLIDRGPE-----S---LA---CLELLLE-PWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCCH---HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC-----H---HH---HHHHHhc-CCEEEeECCChH
Confidence 689999999653 33333322 1 58999999999964321 1 12 2222222 468899999996
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 67 ~ 67 (207)
T cd07424 67 M 67 (207)
T ss_pred H
Confidence 4
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00046 Score=63.89 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+++++||+|....... .++.+.- .+.|.++++||++..+.. . .+..+.+..+ ..+++.+.||||..
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~-----s---~~vl~~l~~l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPD-----S---LEVLRFVKSL--GDSAVTVLGNHDLH 69 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcC-----H---HHHHHHHHhc--CCCeEEEecChhHH
Confidence 6789999998654332 2233321 257999999999964321 1 2233333333 34688999999974
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0013 Score=59.91 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=45.1
Q ss_pred EEEecCCCCCCc--HHHHHHHH----Hh-----CCCeEEecccccccCCCCcc--------ccchhhHHHHHHHHHhhhc
Q 017284 165 GIIGDLGQTYNS--LSTLKHYM----QS-----GGQSVLFLGDLSYADRYEYN--------DVGIRWDSWGRFIEQSAAY 225 (374)
Q Consensus 165 ~v~gD~~~~~~~--~~~l~~~~----~~-----~~d~vl~~GD~~y~~~~~~~--------~~~~~w~~~~~~~~~~~~~ 225 (374)
+++||+|.+... ...+..+. .. ++|.++++||++........ .....+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 578999976432 12222222 22 45999999999964211000 0012234455666677677
Q ss_pred CCeEEcCCCcccc
Q 017284 226 QPWIWSAGNHEIE 238 (374)
Q Consensus 226 ~P~~~v~GNHD~~ 238 (374)
+|++.++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00082 Score=61.33 Aligned_cols=66 Identities=18% Similarity=0.298 Sum_probs=40.9
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh-------------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCe
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS-------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~-------------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~ 228 (374)
.|++++||+|..... +.++.+. +-|.++++||++..+.. . .+..+.+..+...-.+
T Consensus 1 ~~~~vIGDIHG~~~~---L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~-----S---~~vl~~~~~~~~~~~~ 69 (245)
T PRK13625 1 MKYDIIGDIHGCYQE---FQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPH-----S---LRMIEIVWELVEKKAA 69 (245)
T ss_pred CceEEEEECccCHHH---HHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcC-----h---HHHHHHHHHHhhCCCE
Confidence 368999999986433 3333322 23689999999964321 1 2223333333334578
Q ss_pred EEcCCCcccc
Q 017284 229 IWSAGNHEIE 238 (374)
Q Consensus 229 ~~v~GNHD~~ 238 (374)
+++.||||..
T Consensus 70 ~~l~GNHE~~ 79 (245)
T PRK13625 70 YYVPGNHCNK 79 (245)
T ss_pred EEEeCccHHH
Confidence 9999999963
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.015 Score=53.21 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=75.1
Q ss_pred EEEEecCCCCCCcH--HHHHHHHHh---------------CCCeEEecccccccCCCCcc--------------ccchhh
Q 017284 164 FGIIGDLGQTYNSL--STLKHYMQS---------------GGQSVLFLGDLSYADRYEYN--------------DVGIRW 212 (374)
Q Consensus 164 f~v~gD~~~~~~~~--~~l~~~~~~---------------~~d~vl~~GD~~y~~~~~~~--------------~~~~~w 212 (374)
++++||.+.+.... ..++.+.+. +...+|++||.+...+.... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998775532 122222111 33479999999974432110 112334
Q ss_pred HHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCc--CCCCCCCCceEEEecCCEEEEEEeCCC---
Q 017284 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY--TASKSTNPLWYAIRRASAHIIVLSSYS--- 287 (374)
Q Consensus 213 ~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~--~~~~~~~~~~ysf~~g~v~fi~Ldt~~--- 287 (374)
+.+..++..+.+.+|+...|||||-... .... .++. ...|.... ..-....+- |.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~-~lPQ-qplh--~~lfp~s~~~~~~~~vtNP-~~~~i~g~~vLgtsGqni~D 156 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANH-SLPQ-QPLH--RCLFPKSSNYSTLNLVTNP-YEFSIDGVRVLGTSGQNVDD 156 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccc-cCCC-CCCC--HHHhhcccccCCcEEeCCC-eEEEECCEEEEEECCCCHHH
Confidence 5566677788889999999999997432 1111 1110 01111000 000011122 46899999999887743
Q ss_pred --CCCCChHHHHHHHHHHhh
Q 017284 288 --PYVKYTPQWWWLREELKK 305 (374)
Q Consensus 288 --~~~~~~~Q~~WL~~~L~~ 305 (374)
.|...+.-.+.|++.|+.
T Consensus 157 i~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 157 ILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHhCCCCCHHHHHHHHHHh
Confidence 233344456778888765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.016 Score=61.13 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=28.5
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|...-..... .+.+. .-. .+.+. +||++|+||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~-~l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASY-YLTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhH-HHhcCCCCCEEEECCCCCcc
Confidence 56888999999876432111 11111 111 13443 79999999999864
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0059 Score=63.25 Aligned_cols=46 Identities=17% Similarity=0.309 Sum_probs=28.4
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
.++.-+|++.|...-...... ..+... ..+.+ -+||++++||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 568889999998764321100 111111 12334 47999999999994
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.019 Score=59.67 Aligned_cols=46 Identities=17% Similarity=0.208 Sum_probs=27.8
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
.++.-+|++.|...-...... ..+... .. +.+ -+||+++.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~--~aen~~---~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKA--MAENSV---YY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccc--cccchh---HH-HhcCCCCCEEEeCCCCcc
Confidence 568889999998763221100 111111 11 233 47999999999985
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.02 Score=47.46 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCC--------------cHHHHHHHHHh-CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC
Q 017284 163 TFGIIGDLGQTYN--------------SLSTLKHYMQS-GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (374)
Q Consensus 163 ~f~v~gD~~~~~~--------------~~~~l~~~~~~-~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~ 226 (374)
.+-.+||+|.+.. ....+..+++. +| |.+.++||++..... + ....+.++.+-..
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~-----~---~~a~~IlerLnGr- 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR-----E---RAAGLILERLNGR- 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch-----h---hHHHHHHHHcCCc-
Confidence 3566788887632 11234455554 44 789999999954321 1 3455556665443
Q ss_pred CeEEcCCCccc
Q 017284 227 PWIWSAGNHEI 237 (374)
Q Consensus 227 P~~~v~GNHD~ 237 (374)
...++||||-
T Consensus 76 -khlv~GNhDk 85 (186)
T COG4186 76 -KHLVPGNHDK 85 (186)
T ss_pred -EEEeeCCCCC
Confidence 3789999995
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0013 Score=58.96 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCCcHH-HHHHHH-HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYM-QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||+|....... .++.+. ..+.|.++++||++..+..+ .+..+.+. ...++.+.||||..
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--------~~~l~~l~----~~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPES--------LNVLRLLN----QPWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCH--------HHHHHHHh----hCCcEEEECchHHH
Confidence 8999999998643322 222222 12679999999999643221 12222222 22567899999963
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0014 Score=58.81 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCcHH-HHHHHHHh--------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 164 FGIIGDLGQTYNSLS-TLKHYMQS--------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 164 f~v~gD~~~~~~~~~-~l~~~~~~--------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
+.++||+|....... .++++... ..|.++++||++..+.. + .+..+.+..+...-.++.+.||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S-------~~vl~~l~~l~~~~~~~~l~GN 72 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-I-------RELLEIVKSMVDAGHALAVMGN 72 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-H-------HHHHHHHHHhhcCCCEEEEEcc
Confidence 357999998654322 22332111 25799999999964321 1 2233334333333468889999
Q ss_pred cccc
Q 017284 235 HEIE 238 (374)
Q Consensus 235 HD~~ 238 (374)
||..
T Consensus 73 HE~~ 76 (222)
T cd07413 73 HEFN 76 (222)
T ss_pred CcHH
Confidence 9964
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.005 Score=45.49 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=44.8
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+|+.++++.-. .+++.|.|..+.... .-.|+|....+.. ....... ..-...++++||+|+|.|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~----~~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS------DWQEVTV----PGNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSS------EEEEEEE----ETTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEecccce------eeeeeee----eeeeeeeeeccCCCCCEE
Confidence 57788888654 589999999984221 2357776665432 0111110 111236789999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0017 Score=58.09 Aligned_cols=64 Identities=20% Similarity=0.196 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSL-STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~-~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||+|...... ..++.+... +.|-++++||++..+..+ .+-.+.+. ...+..+.||||..
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s--------~~vl~~l~----~~~~~~v~GNHE~~ 83 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQS--------LRCLQLLE----EHWVRAVRGNHEQM 83 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCH--------HHHHHHHH----cCCceEeeCchHHH
Confidence 899999999865432 233333222 578999999999643211 12222222 23467899999964
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.003 Score=57.85 Aligned_cols=64 Identities=22% Similarity=0.282 Sum_probs=39.6
Q ss_pred EEEecCCCCCCcHH-HHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 165 GIIGDLGQTYNSLS-TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 165 ~v~gD~~~~~~~~~-~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.++||+|....... .++++... +.|.++++||++..+.. . .+..+++..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~-----s---~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPD-----S---LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcC-----H---HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 47899998654322 23333222 57999999999964321 1 23334444332 3678999999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0044 Score=57.36 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHh------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC---CeEEcC
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ---PWIWSA 232 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~---P~~~v~ 232 (374)
++.++||+|....... .++.+.+. ..+.+|++||++..... . .+..+++..+.... .++.+.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPd-----S---~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPE-----T---RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCC-----H---HHHHHHHHHhhhcccccceEEEe
Confidence 6889999998754332 33444332 24689999999964321 1 22333333333222 478899
Q ss_pred CCcccc
Q 017284 233 GNHEIE 238 (374)
Q Consensus 233 GNHD~~ 238 (374)
||||..
T Consensus 75 GNHE~~ 80 (304)
T cd07421 75 GNHDFA 80 (304)
T ss_pred cCChHH
Confidence 999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0039 Score=55.86 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=38.2
Q ss_pred EEecCCCCCCcHHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCcccc
Q 017284 166 IIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (374)
Q Consensus 166 v~gD~~~~~~~~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~~ 238 (374)
++||+|.... .+.++.+ .+.|.+|++||++..... . .+..+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~~---~l~~~l~~~~~~~~d~li~lGD~vdrg~~-----~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCLD---DLLRLLEKIGFPPNDKLIFLGDYVDRGPD-----S---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCHH---HHHHHHHHhCCCCCCEEEEECCEeCCCCC-----c---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 6899997533 3333333 378999999999964321 1 222233332221 34799999999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.009 Score=53.43 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=46.6
Q ss_pred cEEEEEecCCCCCCc-----------------HHHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 162 YTFGIIGDLGQTYNS-----------------LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-----------------~~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
-+.++++|.|.+... ...+.++.+ .+|+-+|.+||+--+-+... ...|+....+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~---~~e~~~~~~f~~~~~ 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSL---RQEKEEVREFLELLD 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccc---cccHHHHHHHHHHhc
Confidence 378899999987431 112333333 39999999999986544211 334444445555443
Q ss_pred hcCCeEEcCCCcccc
Q 017284 224 AYQPWIWSAGNHEIE 238 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (374)
. .-|+++.||||-.
T Consensus 97 ~-~evi~i~GNHD~~ 110 (235)
T COG1407 97 E-REVIIIRGNHDNG 110 (235)
T ss_pred c-CcEEEEeccCCCc
Confidence 3 2599999999975
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0087 Score=55.22 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+..++||+|....... .++++.-. +.|-++++||++..+... .+..+++..+. -.+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s--------levL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGS--------LEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH--------HHHHHHHHhcC--CCeEEEEChhHHH
Confidence 4678999998754332 33333322 568999999999643211 22333443332 1356899999973
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0081 Score=54.52 Aligned_cols=174 Identities=14% Similarity=0.139 Sum_probs=95.1
Q ss_pred CCeEEecccccccCCCCcccc--chhhHHHH-H---HHHHhhhcCCeEEcCCCcccccCCCCCC----cccccccccc--
Q 017284 188 GQSVLFLGDLSYADRYEYNDV--GIRWDSWG-R---FIEQSAAYQPWIWSAGNHEIEFMPNMGE----VIPFKSYLHR-- 255 (374)
Q Consensus 188 ~d~vl~~GD~~y~~~~~~~~~--~~~w~~~~-~---~~~~~~~~~P~~~v~GNHD~~~~~~~~~----~~~~~~y~~~-- 255 (374)
|--++..||++...+....+. ..+..+|. + .+.+....+|+++-.||||.+-+.-.-. .+....|...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 445677789997665433221 11112221 1 1223345689999999999863210000 0000111111
Q ss_pred -----cccCcC-CCCCCCCceEEEecCCEEEEEEeCCCCC-CC-ChHHHHHHHHHHhhccCCCCCeEEEEecccc--eec
Q 017284 256 -----IATPYT-ASKSTNPLWYAIRRASAHIIVLSSYSPY-VK-YTPQWWWLREELKKVDREKTPWLIVLMHVPL--YSS 325 (374)
Q Consensus 256 -----f~~p~~-~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~--y~~ 325 (374)
|..|.. ..-+....-||+++|++|.+-+-+...- .. ...-+-||+.+|.... +..+-++++.|.-+ +++
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~a-adgrpv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSA-ADGRPVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeec-cCCCceeehhhhCccceec
Confidence 111111 1112334568999999999887663210 11 1233579999998743 23344788888765 333
Q ss_pred CCCC--------CCC------CHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 326 NVVH--------YME------GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 326 ~~~~--------~~~------~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..+. .++ ....|..+...+.-|+|--.|.||.|....
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccce
Confidence 2221 001 134577888888899999999999998543
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.038 Score=54.55 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=32.7
Q ss_pred CCCcEEEEEecCCCCCC---------cHHHHHH---HHHh-CCCeEEecccccccCC
Q 017284 159 DAPYTFGIIGDLGQTYN---------SLSTLKH---YMQS-GGQSVLFLGDLSYADR 202 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~---------~~~~l~~---~~~~-~~d~vl~~GD~~y~~~ 202 (374)
...+||++..|.|.++. ++.++.. |++. ++|+||..||+.-++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35799999999998753 3444443 3333 9999999999997654
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.37 Score=43.64 Aligned_cols=168 Identities=17% Similarity=0.183 Sum_probs=76.5
Q ss_pred EEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 166 IIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 166 v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
++||.=....- ...|..+.+. ++||||..|.++-....-. . ..+.+++ ...+- ..+.|||=+...
T Consensus 2 fiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git---~---~~~~~L~---~~GvD-viT~GNH~wdkk- 70 (253)
T PF13277_consen 2 FIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGIT---P---KIAEELF---KAGVD-VITMGNHIWDKK- 70 (253)
T ss_dssp EE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS-----H---HHHHHHH---HHT-S-EEE--TTTTSST-
T ss_pred eEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCC---H---HHHHHHH---hcCCC-EEecCcccccCc-
Confidence 56776332211 1223444444 9999999999985432211 1 2222222 22344 348999987521
Q ss_pred CCCCcccccccccccccCcCCCC-CCCCceEEEecCCEEEEEEeCC--CCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 242 NMGEVIPFKSYLHRIATPYTASK-STNPLWYAIRRASAHIIVLSSY--SPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~-~~~~~~ysf~~g~v~fi~Ldt~--~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
+...+-.-..+.-.|.|-+. ..+.-|..++.++..+-+++-. .-.....--..-+++.|++. +.+++.+||=+
T Consensus 71 ---ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDF 146 (253)
T PF13277_consen 71 ---EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDF 146 (253)
T ss_dssp ---THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEE
T ss_pred ---HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEe
Confidence 11011011122234555333 3456788899988777666652 21111112233344444443 24778899999
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
|.= ..... .-.-++-.-+|.+|+.-|+|.-
T Consensus 147 HAE-----------aTSEK-~A~g~~lDGrvsaV~GTHTHVq 176 (253)
T PF13277_consen 147 HAE-----------ATSEK-QAMGWYLDGRVSAVVGTHTHVQ 176 (253)
T ss_dssp E-S------------HHHH-HHHHHHHBTTBSEEEEESSSS-
T ss_pred ecC-----------cHHHH-HHHHHHhCCcEEEEEeCCCCcc
Confidence 942 11112 2234556778999999999984
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.028 Score=52.90 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNHD 236 (374)
+++++||+|..... +.++.+. ..+-++++||++..+... -+-...+..+.-.. -++.+.||||
T Consensus 44 ~i~ViGDIHG~~~d---L~~l~~~~g~~~~~~ylFLGDyVDRG~~s--------~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 44 PVTVCGDIHGQFYD---LLKLFEVGGSPANTRYLFLGDYVDRGYFS--------IECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEECCccCCCCCh--------HHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 58899999976432 3323222 348899999999643210 12222233333333 4788999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 113 ~~ 114 (305)
T cd07416 113 CR 114 (305)
T ss_pred HH
Confidence 75
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.03 Score=52.98 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=38.3
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
++.++||+|.... .+.++.+. .-+-+|++||++..+... -+-...+-.+.... -++.+.|||
T Consensus 52 ~~~vvGDiHG~~~---dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s--------~Evl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGKLD---DLFLIFYKNGLPSPENPYVFNGDFVDRGKRS--------IEILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCCHH---HHHHHHHHcCCCCccceEEEeccccCCCCCc--------HHHHHHHHHHhhcCCCcEEEecCch
Confidence 6789999998643 23333332 226799999999643221 11222222232222 378899999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.1 Score=54.05 Aligned_cols=74 Identities=19% Similarity=0.355 Sum_probs=49.6
Q ss_pred CCCCceEEEEEcCCCCCCceEEEe----ecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC-----
Q 017284 71 YDGKAVIISWVTPNELGSNRVQYG----KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----- 141 (374)
Q Consensus 71 d~~~~~~v~W~t~~~~~~~~V~y~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~----- 141 (374)
-..++++++|..++.+....++|- ++.. ...+|.. -..-...++++||+|||.|-+||..
T Consensus 454 ~~~~sitlsW~~p~~png~ildYEvky~ek~~--------~e~~~~~---~~t~~~~~ti~gL~p~t~YvfqVRarT~aG 522 (996)
T KOG0196|consen 454 RTSDSITLSWSEPDQPNGVILDYEVKYYEKDE--------DERSYST---LKTKTTTATITGLKPGTVYVFQVRARTAAG 522 (996)
T ss_pred eccCceEEecCCCCCCCCcceeEEEEEeeccc--------cccceeE---EecccceEEeeccCCCcEEEEEEEEecccC
Confidence 346899999999876665544443 3321 1111111 1113557899999999999999853
Q ss_pred -CCCCceEEEECCCC
Q 017284 142 -GDSSREFWFQTPPK 155 (374)
Q Consensus 142 -~~~s~~~~F~T~p~ 155 (374)
|..|....|.|.|.
T Consensus 523 ~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 523 YGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCCCCceeeeecCc
Confidence 45788899999886
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.043 Score=50.80 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNHD~~ 238 (374)
+++++||+|....... .+..+.....+-++++||++..+... -+....+..+... --++.+.||||..
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s--------~e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFS--------IEVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCCh--------HHHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 6889999997543221 22222112567899999999633211 1222222222222 2478899999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.8 Score=41.10 Aligned_cols=174 Identities=17% Similarity=0.213 Sum_probs=92.5
Q ss_pred cEEEEEecCCCCCCcH---HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~---~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=....-. +-|..+.+. ++||||..|-++-... .-.|+-+..+++. .+- +.+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~------Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF------GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc------CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 5899999985543322 234445555 8999999999885432 2233444444332 233 459999987
Q ss_pred ccCCCCCCcccccccccccccCcCCCCC-CCCceEEEecCCEEEEEEeCCCC--CC-CChHHHHHHHHHHhhccCCCCCe
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTASKS-TNPLWYAIRRASAHIIVLSSYSP--YV-KYTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~~~-~~~~~ysf~~g~v~fi~Ldt~~~--~~-~~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
... + ...|-.-..++-.|.+-+.. .+..|+-|+..+..+.+.+-.-. .. ....-.+=+++.|.+.+ .+++.
T Consensus 71 d~~-e---i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQK-E---ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cch-H---HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 421 1 00111112233345543332 23456667776655555543211 11 01122333556666543 35678
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
+||-+|.-.-+. ...| -++-+-+|.+|+.=|+|.-.-
T Consensus 146 iiVDFHAEtTSE-----------K~a~-g~yldGrvsavvGTHTHV~Ta 182 (266)
T COG1692 146 IIVDFHAETTSE-----------KNAF-GWYLDGRVSAVVGTHTHVPTA 182 (266)
T ss_pred EEEEccccchhh-----------hhhh-heEEcCeEEEEEeccCccccc
Confidence 999999532211 1111 233355789999999998543
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.19 Score=50.45 Aligned_cols=55 Identities=18% Similarity=0.305 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcE-EEEcCccc
Q 017284 294 PQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDF-IFAGHVHA 359 (374)
Q Consensus 294 ~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdl-vlsGH~H~ 359 (374)
.|.+|-.+.++. .+.+-+|++.|.|.-... +.+ ..+..+...+ ++++ ||.||.|.
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-----e~~---~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-----EWK---SLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred hccchHHHHhhc---cCccEEEEecccccccch-----hhh---hHHHHHhhhCCCCceEEECchhhh
Confidence 567888887776 677888999998863211 111 1334444444 4778 99999998
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.049 Score=50.74 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNHD~~ 238 (374)
.+.++||+|....... .+........+-+|++||++..+.. . -+....+..+.-. -.++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~-----s---~evl~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYY-----S---VETFLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcC-----H---HHHHHHHHHHhhcCCCcEEEEecccchH
Confidence 4888999997543221 2221111144678999999964321 1 1222222233222 3588999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.055 Score=50.65 Aligned_cols=68 Identities=21% Similarity=0.175 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNHD~~ 238 (374)
.++++||+|....... .+........+-+|++||++..+... -+....+..+.-.. -++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--------~e~i~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCc--------HHHHHHHHHhhhhCCCcEEEEecccchh
Confidence 5888999997543221 22221111456788999999643211 11222222222222 378899999984
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.12 Score=47.12 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
+.+.+++++++++ +++.++||++|--.-. ...-.+.++ .+...+.+.|+|+|+.+|.|..+-.. +++++-+||
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~----~~~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q~~E-~y~~~~I~Y 241 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEY----ENYPTPEQR-ELARALIDAGADIIIGHHPHVIQPVE-IYKGKPIFY 241 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCC----CCCCCHHHH-HHHHHHHHcCCCEEEeCCCCcccceE-EECCEEEEE
Confidence 4588888888875 5789999999963211 111123333 45555556899999999999976543 456665554
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.064 Score=51.70 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=38.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
++.++||+|.... .+..+.+. .. +.+|++||++..+.. . -+....+..+.-.. -++.+.|||
T Consensus 67 ~i~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~-S-------lEvl~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 67 EVVVVGDVHGQLH---DVLFLLEDAGFPDQNRFYVFNGDYVDRGAW-G-------LETFLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CEEEEEecCCCHH---HHHHHHHHhCCCCCCceEEEeccccCCCCC-h-------HHHHHHHHHHhhccCCeEEEEeeec
Confidence 6899999998643 33333332 22 458999999953321 1 12222222332222 378899999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.077 Score=49.86 Aligned_cols=65 Identities=17% Similarity=0.252 Sum_probs=37.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC--eEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P--~~~v~GNHD 236 (374)
.+.++||+|.... .+.++.+ ...+-+|++||++..+.. . -+....+-.+.-..| ++.+.||||
T Consensus 44 ~i~vvGDIHG~~~---~L~~l~~~~~~~~~~~~lfLGDyVDRG~~-----s---~evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 44 PVNVCGDIHGQFY---DLQALFKEGGDIPNANYIFIGDFVDRGYN-----S---VETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred CEEEEEeCCCCHH---HHHHHHHhcCCCCCceEEEeeeEcCCCCC-----H---HHHHHHHHHhhhcCCCcEEEEecccc
Confidence 3788999997543 2333322 245678999999964321 1 112222222322333 788999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 113 ~~ 114 (303)
T PTZ00239 113 SR 114 (303)
T ss_pred hH
Confidence 74
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.44 Score=34.50 Aligned_cols=69 Identities=20% Similarity=0.370 Sum_probs=38.0
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
|..+.+.... ..++.|.|....... .-.|+|........ ..+.. ...-..++.+.+|.|++.|.
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~~~~---~~~~~~~~~i~~l~p~~~Y~ 71 (93)
T cd00063 4 PTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KEVEV---TPGSETSYTLTGLKPGTEYE 71 (93)
T ss_pred CCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EEeec---cCCcccEEEEccccCCCEEE
Confidence 4445444333 478999998864321 12344444321111 11110 11245677899999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
++|..
T Consensus 72 ~~v~a 76 (93)
T cd00063 72 FRVRA 76 (93)
T ss_pred EEEEE
Confidence 99853
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.094 Score=49.58 Aligned_cols=23 Identities=13% Similarity=0.353 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 46778889999999999999855
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.22 Score=48.91 Aligned_cols=80 Identities=14% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCCcEEEEEecCCCCCCcH--HHHHHHHHh---------CCCeEEecccccccCCCCcc--------ccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYNSL--STLKHYMQS---------GGQSVLFLGDLSYADRYEYN--------DVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~--~~l~~~~~~---------~~d~vl~~GD~~y~~~~~~~--------~~~~~w~~~~~~~ 219 (374)
...++.++++|.|.+...+ ..+....+. +..+++.+||.+..-+...+ +...+++++.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 3578899999999875322 112222221 34789999999974332111 2234566666777
Q ss_pred HHhhhcCCeEEcCCCcccc
Q 017284 220 EQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~ 238 (374)
..+-..+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777778899999999974
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.13 Score=48.58 Aligned_cols=23 Identities=13% Similarity=0.326 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 45777889999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.099 Score=48.94 Aligned_cols=23 Identities=13% Similarity=0.275 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 45778889999999999999854
|
|
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.88 Score=31.79 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=38.6
Q ss_pred eEEEEeeCCCCCceEEEEEcCCCCC--CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeC
Q 017284 63 QVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140 (374)
Q Consensus 63 ~v~lt~~~d~~~~~~v~W~t~~~~~--~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~ 140 (374)
.+++.... .+++.|+|..+.... .-.++|........ ....... .........+.+|+|+++|.++|.
T Consensus 6 ~~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 6 NLRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred cEEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEE
Confidence 35555444 248999998553221 23566655433211 0001110 011146788999999999999985
Q ss_pred C
Q 017284 141 D 141 (374)
Q Consensus 141 ~ 141 (374)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 4
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.2 Score=47.38 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEcCc
Q 017284 337 RAVFESWFVHSRVDFIFAGHV 357 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~ 357 (374)
.+.+...+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.19 E-value=1.3 Score=48.19 Aligned_cols=80 Identities=25% Similarity=0.472 Sum_probs=47.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCC--c----eEEEeecCCCCC---ceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGS--N----RVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~--~----~V~y~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
.|+.|.+-... +++++|.|..+.+... . .++|+..+.... ..+.|. ...-.+++|+
T Consensus 618 PP~Nl~lev~s--StsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n-------------~~~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVVS--STSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGN-------------TTQYLFNGLE 682 (1381)
T ss_pred CCcceEEEecC--CCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccc-------------hhhhHhhcCC
Confidence 45557776654 7999999999853221 1 234444332211 111111 1112467899
Q ss_pred CCCEEEEEeCC------CCCCceEEEECCC
Q 017284 131 YDTKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|+|.|.+||.. |..|.+.++.|+-
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 99999999843 3456777888763
|
|
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.77 E-value=3.3 Score=45.25 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=46.9
Q ss_pred EEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeC-----
Q 017284 66 ITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG----- 140 (374)
Q Consensus 66 lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~----- 140 (374)
+..+.-...++.|.|..+.-.+.....|..--.... .|....+ +.-.++.+|.||+|.|.|.|||.
T Consensus 527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~---~~~~~~~------~~n~~e~ti~gL~k~TeY~~~vvA~N~~ 597 (1381)
T KOG4221|consen 527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDD---TGKELRV------ENNATEYTINGLEKYTEYSIRVVAYNSA 597 (1381)
T ss_pred ccccccCcceEEEEecCCCCCCCCceEEEEEEEcCC---CCceEEE------ecCccEEEeecCCCccceEEEEEEecCC
Confidence 443333468899999998644444444443211000 1111111 11345567889999999999984
Q ss_pred -CCCCCceEEEECCC
Q 017284 141 -DGDSSREFWFQTPP 154 (374)
Q Consensus 141 -~~~~s~~~~F~T~p 154 (374)
.+..|...+++|+.
T Consensus 598 G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 598 GSGVSSADITVRTLS 612 (1381)
T ss_pred CCCCCCCceEEEecc
Confidence 34567778888863
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.89 E-value=2.7 Score=38.46 Aligned_cols=64 Identities=22% Similarity=0.190 Sum_probs=40.4
Q ss_pred CCcEEEEEecCCCCCCcHHHHHHHHHh-CCCeEEecccccccCCCCccccchhh-HHHHHHHHHhhhcCCe---EEcCCC
Q 017284 160 APYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRW-DSWGRFIEQSAAYQPW---IWSAGN 234 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w-~~~~~~~~~~~~~~P~---~~v~GN 234 (374)
...||+.++|.|.-... +... +-|+++++||.+.-. ..+| ..|.+ ...+.|. +++.||
T Consensus 60 ~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g-------~~~ev~~fn~----~~gslph~yKIVIaGN 122 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLG-------LPEEVIKFNE----WLGSLPHEYKIVIAGN 122 (305)
T ss_pred CceEEEEecCcccccCc------cccCCCCceEEeccCCcccc-------CHHHHHhhhH----HhccCcceeeEEEeec
Confidence 46799999999875332 2222 779999999999522 2222 22222 2233342 679999
Q ss_pred cccccC
Q 017284 235 HEIEFM 240 (374)
Q Consensus 235 HD~~~~ 240 (374)
||...+
T Consensus 123 HELtFd 128 (305)
T KOG3947|consen 123 HELTFD 128 (305)
T ss_pred cceeec
Confidence 999754
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=82.75 E-value=1 Score=39.75 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCc--HHHHHHHH-----HhCCCeEEecccccccCCCCcc------ccchhhH---HHHHHHHHhhhcCC
Q 017284 164 FGIIGDLGQTYNS--LSTLKHYM-----QSGGQSVLFLGDLSYADRYEYN------DVGIRWD---SWGRFIEQSAAYQP 227 (374)
Q Consensus 164 f~v~gD~~~~~~~--~~~l~~~~-----~~~~d~vl~~GD~~y~~~~~~~------~~~~~w~---~~~~~~~~~~~~~P 227 (374)
|++++|.+.+.+. .+.+..+. +.+|+.+|++|+++........ ......+ .+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888887442 33444443 2369999999999974332110 0010011 11222334456789
Q ss_pred eEEcCCCcccccC
Q 017284 228 WIWSAGNHEIEFM 240 (374)
Q Consensus 228 ~~~v~GNHD~~~~ 240 (374)
++.+||+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.05 E-value=6.2 Score=42.89 Aligned_cols=71 Identities=24% Similarity=0.341 Sum_probs=45.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC----CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~----~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|+.+.+...+ .+++.|.|..... ...-.|+|+...++.. ...... ..+-.-.+.|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCcc-----ccccee----ecCCcceEeeeCCCCCce
Confidence 567777776554 5889999955422 1234688988876531 111110 012334568999999999
Q ss_pred EEEEeC
Q 017284 135 YYYKIG 140 (374)
Q Consensus 135 Y~Y~v~ 140 (374)
|+..+.
T Consensus 890 Y~~~vr 895 (1051)
T KOG3513|consen 890 YRFYVR 895 (1051)
T ss_pred EEEEEE
Confidence 999985
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 374 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-115 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-112 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-111 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-111 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 334 bits (858), Expect = e-113
Identities = 192/330 (58%), Positives = 250/330 (75%), Gaps = 4/330 (1%)
Query: 40 WPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEK 98
D+P + VF +P G+NAPQQV ITQGDY+G+ VIISW TP ++ G+N+V Y
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENS 63
Query: 99 KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHP 158
K A GTV Y +Y Y S +IHHC + DLEYDTKYYY++G GD+ R+FWF TPPK P
Sbjct: 64 KSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGP 123
Query: 159 DAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS--VLFLGDLSYADRYEYNDVGIRWDSWG 216
D PY FG+IGD+GQT++S +TL HY Q+ + VLF+GDLSY++R+ +D RWD+WG
Sbjct: 124 DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHD-NNRWDTWG 182
Query: 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRA 276
RF E+S AYQPWIW+AGNHEI++ P++GE PF + +R TP+ AS S +PLWYAI+RA
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 277 SAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336
SAHIIVLSSYS +VKY+PQ+ W EL+KV+R +TPWLIVL+H PLY+S HYMEGE+M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 337 RAVFESWFVHSRVDFIFAGHVHAYERSVRM 366
RA+FE +FV+ +VD +F+GHVH+YERS R+
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERV 332
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 332 bits (853), Expect = e-112
Identities = 190/325 (58%), Positives = 246/325 (75%), Gaps = 3/325 (0%)
Query: 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSS 103
D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 104 AEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYT 163
A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP+ D PYT
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYT 121
Query: 164 FGIIGDLGQTYNSLSTLKHYMQSGG--QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221
FG+IGDLGQ+++S +TL HY S Q+VLF+GDLSYADRY +D +RWD+WGRF E+
Sbjct: 122 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTER 180
Query: 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHII 281
S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+I+RASAHII
Sbjct: 181 SVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240
Query: 282 VLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFE 341
VLSSYS Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+MEGE+MR FE
Sbjct: 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 300
Query: 342 SWFVHSRVDFIFAGHVHAYERSVRM 366
+WFV +VD +FAGHVHAYERS R+
Sbjct: 301 AWFVKYKVDVVFAGHVHAYERSERV 325
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 6e-27
Identities = 38/241 (15%), Positives = 64/241 (26%), Gaps = 32/241 (13%)
Query: 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS-----------VLFLGDLSYADRYEYN 206
P F +GD G N+ M + +L LGD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 207 DVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-- 262
R+ F + S PW AGNH+ + S +PY
Sbjct: 63 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 121
Query: 263 --SKSTNPLWYAIRRASAHIIVLSSYSPYV---------KYTPQWWWLREELKKVDREKT 311
+N + + S Q W++++L K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KE 178
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFH 371
+++V H P++S + + +V GH H + +
Sbjct: 179 DYVLVAGHYPVWSIA--EHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGF 236
Query: 372 F 372
Sbjct: 237 V 237
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 82.7 bits (203), Expect = 9e-18
Identities = 33/244 (13%), Positives = 64/244 (26%), Gaps = 45/244 (18%)
Query: 160 APYTFGIIGDLG-----QTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDS 214
F +GD G Q N+ + ++ G ND W +
Sbjct: 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDP--AWKN 59
Query: 215 WGRFIEQ---SAAYQPWIWSAGNHEIEFMPN---MGEVIPFKSYLHRIATPYTASKSTNP 268
+ Y P+ G + N + + + A + P
Sbjct: 60 LYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYP 119
Query: 269 LW-----------------------YAIRRASAHIIVLSSYSPYVKYTP------QWWWL 299
W + +A I + ++ + W L
Sbjct: 120 KWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 179
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
+ +L + ++IV+ P+YSS + + + VD +GH +
Sbjct: 180 KSQLSVAK-KIADFIIVVGDQPIYSSG--YSRGSSYLAYYLLPLLKDAEVDLYISGHDNN 236
Query: 360 YERS 363
E
Sbjct: 237 MEVI 240
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 5e-09
Identities = 28/211 (13%), Positives = 58/211 (27%), Gaps = 34/211 (16%)
Query: 191 VLFLGDLSY-ADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI------------ 237
++ GDL+ ++ + ++ + + GNH+I
Sbjct: 96 LIISGDLTNNGEKTSHEELAKKLTQVEK------NGTQVFVVPGNHDINNPWARKFEKDK 149
Query: 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS-AHIIVLSS--YSPYVKYTP 294
+ + F S L Y +S +++L + Y ++
Sbjct: 150 QLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN 209
Query: 295 QWW----------WLREELKKVDREKTPWLIVLMHVPLYSSN-VVHYMEGESMRAVFESW 343
W++E + LI ++H L N V+ +
Sbjct: 210 PTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLTDHNDVIQKGYTINYNQQVIDA 268
Query: 344 FVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374
+DF +GH+H S
Sbjct: 269 LTEGAMDFSLSGHIHTQNIRSAKSTDGKEIT 299
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 2e-07
Identities = 37/188 (19%), Positives = 62/188 (32%), Gaps = 30/188 (15%)
Query: 191 VLFLGDLS-YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
++F GDL+ + Y + + + + +W GNH+ + + +
Sbjct: 70 IVFTGDLADKGEPAAYRKLRGLVEPFAAQLGA-----ELVWVMGNHD--DRAELRKFLLD 122
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY----TPQWWWLREELKK 305
+ S PL IIVL + P + Q WL EEL
Sbjct: 123 ------------EAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT 170
Query: 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMR--AVFESWFVHSRVDFIFAGHVHAYERS 363
+ T I+ +H P S + +R A + V I AGH+H +
Sbjct: 171 PAPDGT---ILALHHPPIPSVL-DMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 226
Query: 364 VRMSFPFH 371
+ P
Sbjct: 227 TFVGIPVS 234
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 25/177 (14%), Positives = 48/177 (27%), Gaps = 33/177 (18%)
Query: 191 VLFLGDLS-YADRYEYNDVGIRWDSWGRFIEQSAAYQ-PWIWSAGNHEIEFMPNMGEVIP 248
V+ GD+ EY + + P GNH+ E
Sbjct: 45 VVVSGDIVNCGRPEEYQ----------VARQILGSLNYPLYLIPGNHD--DKALFLEY-- 90
Query: 249 FKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY----TPQWWWLREELK 304
+ ++ + N + A+ + ++ + S WL +L
Sbjct: 91 LQPLCPQLGSDA------NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLF 144
Query: 305 KVDREKTPWLIVLMHVPLYSSNVVHYMEGESMR---AVFESWFVHSRVDFIFAGHVH 358
+ + + MH P M+ + + + IF GH H
Sbjct: 145 EGGDKPA---TIFMHHPPLPLGNAQ-MDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 46.1 bits (108), Expect = 1e-05
Identities = 22/139 (15%), Positives = 38/139 (27%), Gaps = 3/139 (2%)
Query: 228 WIWSAGNHEIEFMPNMGEVI--PFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSS 285
+ + + VI +S H + + N + S +
Sbjct: 136 FSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFV 195
Query: 286 YSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFV 345
Q WL L D ++ ++ H+P++ + AV
Sbjct: 196 KFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPICLAWNHEAVLSVLRS 254
Query: 346 HSRVDFIFAGHVHAYERSV 364
H V AGH H R
Sbjct: 255 HQSVLCFIAGHDHDGGRCT 273
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-05
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 25/111 (22%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYK 115
+ ++T ++W P G++ R+++G +E G +Y
Sbjct: 10 QCKPPQVT--CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPGLSYE--- 64
Query: 116 YKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
+ L T YY ++ G G S TPP P +
Sbjct: 65 ----------IKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGPSS 105
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 1e-04
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 18/111 (16%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYK 115
AP+ + + + +AVI+SW P E + Y + T
Sbjct: 11 APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFY----TLDKNIPIDDWIMETI-- 64
Query: 116 YKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
SG + DL DT YY++I G G S F+T P +
Sbjct: 65 --SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGPSS 113
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 3e-04
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 18/110 (16%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
P +T + + W P+ S+ LE + ++S G Y G
Sbjct: 10 MPASPVLT--KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD------G 61
Query: 120 YIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPPKIHPDAPYT 163
V +L TKY + G + S PD+ +
Sbjct: 62 EDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEV----VEFTTCPDSGPS 107
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 11/108 (10%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
+P ++ + + P G + K E + Y ++
Sbjct: 10 SPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD--AKEAS 64
Query: 120 YIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPPKIHPDAP 161
+ L+ +T Y G G+ S F+T P P AP
Sbjct: 65 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAP 112
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 5e-04
Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 16/120 (13%)
Query: 41 PSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKY 100
S+ + D P P + + G + I+W P + G + +E
Sbjct: 4 GSSGVVEFTTCPDKP---GIPVKPSVK-GKIHSHSFKITWDPPKDNGGATINKYVVEMAE 59
Query: 101 DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPP 154
S+ + SG L D L Y G S QTP
Sbjct: 60 GSNGN------KWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 6e-04
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
P+ V + + K +I++W P+E Y + D +AE + G
Sbjct: 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGY-IIYYSTDVNAEIHDWV---IEPVVG 163
Query: 120 YIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDAPY 162
+ +L DT YY+KI G G S F+T PK H +
Sbjct: 164 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT-PKAHHHHHH 211
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 7e-04
Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 87/310 (28%)
Query: 44 DIPLHN-----KVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEK 98
DI FD + P+ + +++ + D +I+S + + + L
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEID--HIIMS---KDAVSGTLRLFWTLLS 73
Query: 99 KYDSSAEGTV-----TNYTFY--KYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQ 151
K + + V NY F K+ T+ Y R+ +
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMSPIKTEQR------QPSMMTRMY------IEQRDRLYN 121
Query: 152 TPPKIHPDAPYTFGIIGDLGQTYNSLSTLK-------HYMQSGGQSVLFLGDLSYADRYE 204
A Y + + +L L+ + G++ + L
Sbjct: 122 DNQVF---AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178
Query: 205 YNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264
D I W + +E + + L++I +T+
Sbjct: 179 KMDFKIFWLNLKNCNSPET------------VLEMLQKL---------LYQIDPNWTS-- 215
Query: 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWW--WLREELKKVDREKTPWLIVLMHVPL 322
S +S +K LR LK E L+VL++V
Sbjct: 216 ------------------RSDHSSNIKLRIHSIQAELRRLLKSKPYENC--LLVLLNV-- 253
Query: 323 YSSNVVHYME 332
++ +
Sbjct: 254 QNAKAWNAFN 263
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 374 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.96 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.87 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.86 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.8 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.57 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.54 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.43 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.26 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.26 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.2 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.18 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.07 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.99 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.98 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.97 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.96 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.95 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.94 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.91 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.83 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.8 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.76 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.76 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.76 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.74 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.6 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.55 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.54 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.47 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.45 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.27 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.22 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.01 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.97 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.92 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.91 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.89 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.89 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.8 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.75 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.64 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.57 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.45 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.43 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.42 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.41 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.38 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.38 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.35 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.34 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.3 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.27 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 97.24 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.23 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.19 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.14 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.13 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.08 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.07 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 97.07 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.06 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.99 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.95 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.94 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.94 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.89 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.89 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.88 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.85 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.84 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.83 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.83 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.8 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.76 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.75 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.74 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.68 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.67 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.67 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.65 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.6 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.6 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.6 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.59 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.59 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.53 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 96.53 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.49 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.48 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.45 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.45 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.45 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.42 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.39 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.36 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.35 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.34 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.34 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.3 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.29 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.27 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 96.24 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 96.23 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.22 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 96.21 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 96.21 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.2 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.2 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.18 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.17 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 96.16 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.14 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 96.12 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.12 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 96.05 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.05 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.04 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.03 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 96.02 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.02 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.01 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.99 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 95.93 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 95.92 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 95.88 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.88 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 95.82 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 95.8 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.78 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 95.78 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 95.68 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.67 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 95.65 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.64 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.62 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.6 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 95.48 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.45 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.34 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 95.31 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.23 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.18 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 95.16 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.15 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.11 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.11 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.05 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 94.99 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.99 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.99 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 94.87 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.79 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.72 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.62 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.62 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.55 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.52 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.47 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.44 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 94.41 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.33 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 94.3 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.29 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 94.15 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.11 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.87 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.65 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 92.92 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 92.91 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 92.74 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 92.58 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 92.3 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 92.0 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 91.73 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 91.37 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 91.28 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.11 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 90.91 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 90.8 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 90.46 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 90.34 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 90.29 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 90.26 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 90.16 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 89.72 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 89.71 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 89.53 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.4 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 89.14 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 88.74 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 87.96 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 87.77 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 87.57 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 87.47 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 86.18 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 86.03 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 85.97 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 83.54 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 82.6 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-64 Score=496.21 Aligned_cols=329 Identities=59% Similarity=1.112 Sum_probs=288.4
Q ss_pred CCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcC-CCCCCceEEEeecCCCCCceEEeEEEEEEeeccccc
Q 017284 41 PSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119 (374)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~-~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~ 119 (374)
.++|||+++++|++|.+..+|+||||++++++.++|+|+|+|. +.++.++|+|++.++.+..++.|+.++|++.+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSA 84 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECC
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCC
Confidence 3678999999999999889999999999999889999999999 777899999999988888888888877776666788
Q ss_pred EEEEEEeCCCCCCCEEEEEeCCCCCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccc
Q 017284 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDL 197 (374)
Q Consensus 120 ~~~~v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~ 197 (374)
++|+|+|+||+|||+|+|||+++.+|++++|+|+|.+++..++||+++||+|.......+++++.+. +|||||++||+
T Consensus 85 ~~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~ 164 (426)
T 1xzw_A 85 FIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDL 164 (426)
T ss_dssp EEEEEEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCC
T ss_pred EEEEEEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCCh
Confidence 9999999999999999999998778999999999987777899999999999865556778888876 89999999999
Q ss_pred cccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCC
Q 017284 198 SYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS 277 (374)
Q Consensus 198 ~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~ 277 (374)
+|+++....+ +.+|+.|.+.++++.+.+|+++++||||+..++..++...|..|.++|.+|.++++...+.||+|++|+
T Consensus 165 ~y~~~~~~~~-~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~ 243 (426)
T 1xzw_A 165 SYSNRWPNHD-NNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRAS 243 (426)
T ss_dssp CCGGGSGGGC-THHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETT
T ss_pred hhcccCCccc-chHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECC
Confidence 9976643222 567999999999998899999999999987543233344677889999999876666778999999999
Q ss_pred EEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCc
Q 017284 278 AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHV 357 (374)
Q Consensus 278 v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 357 (374)
++||+|||+..++.+.+|++||+++|+++++++++|+||++|+|+|++...+..+++.+|+.|+++|.+++||+||+||+
T Consensus 244 ~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 323 (426)
T 1xzw_A 244 AHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHV 323 (426)
T ss_dssp EEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSS
T ss_pred EEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcCh
Confidence 99999999988888899999999999998777889999999999998776566667889999999999999999999999
Q ss_pred ccccccccccCCc
Q 017284 358 HAYERSVRMSFPF 370 (374)
Q Consensus 358 H~yeR~~~~~~~~ 370 (374)
|.|+|++|+++++
T Consensus 324 H~~~r~~p~~~~~ 336 (426)
T 1xzw_A 324 HSYERSERVSNVA 336 (426)
T ss_dssp SSEEEECSEECCC
T ss_pred hhheeeeeecCcc
Confidence 9999999987654
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-64 Score=492.49 Aligned_cols=326 Identities=59% Similarity=1.068 Sum_probs=284.5
Q ss_pred CcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEE
Q 017284 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHH 123 (374)
Q Consensus 44 ~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 123 (374)
|||+++++|++|.+.++|+||||++|++++++|+|+|+|.+.++.+.|+|++.++.+..++.|+.++|.+.+..++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 81 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEE
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEE
Confidence 79999999999998899999999999988899999999987778899999999988888888888777765567889999
Q ss_pred EEeCCCCCCCEEEEEeCCCCCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccccccC
Q 017284 124 CLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYAD 201 (374)
Q Consensus 124 v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~~y~~ 201 (374)
|+|+||+|||+|+|||+.+++|+.++|+|+|.+++..++||+++||+|.......+++++.+. ++||||++||++|++
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~ 161 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYAD 161 (424)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGG
T ss_pred EEECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCcccccc
Confidence 999999999999999999888999999999987777899999999999875555677888776 899999999999987
Q ss_pred CCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEE
Q 017284 202 RYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHII 281 (374)
Q Consensus 202 ~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi 281 (374)
+....+ ..+|+.|.+.++++.+.+|+++++||||+...+..++...|..|..+|.+|.++.....+.||+|++|+++||
T Consensus 162 ~~~~~~-~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i 240 (424)
T 2qfp_A 162 RYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240 (424)
T ss_dssp GSGGGC-THHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEE
T ss_pred cccccc-chHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEE
Confidence 643322 5679999999999888899999999999875433333345778889999998766566789999999999999
Q ss_pred EEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 282 VLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 282 ~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+||++..++.+.+|++||+++|+++++++++|+||++|+|++++...++.++..+|+.|+++|++++||++|+||+|.|+
T Consensus 241 ~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~ 320 (424)
T 2qfp_A 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYE 320 (424)
T ss_dssp ECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEE
T ss_pred EecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhh
Confidence 99999877777899999999999987667899999999999987665666677889999999999999999999999999
Q ss_pred ccccccCCc
Q 017284 362 RSVRMSFPF 370 (374)
Q Consensus 362 R~~~~~~~~ 370 (374)
|++|+++..
T Consensus 321 r~~~~~~~~ 329 (424)
T 2qfp_A 321 RSERVSNIA 329 (424)
T ss_dssp EECSEECCC
T ss_pred eeccccCcc
Confidence 999987643
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=345.24 Aligned_cols=297 Identities=18% Similarity=0.183 Sum_probs=215.3
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCC---------CCCceEEEeecCCCCC--ceEEeEEEEEEeecccccEEEEEEeCCC
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNE---------LGSNRVQYGKLEKKYD--SSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~---------~~~~~V~y~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~v~l~gL 129 (374)
|...-+..| ||..+.+|.|++... ..+..|+|..+.+... ....|+..+. .+.+++|+|+|+||
T Consensus 8 ~f~~GvasG-Dp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL 82 (527)
T 2yeq_A 8 PFTLGVASG-DPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGL 82 (527)
T ss_dssp SCTTCEEEE-CCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSC
T ss_pred Ccccccccc-CCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCc
Confidence 444445555 456667799999742 1356788887776544 3344444332 35679999999999
Q ss_pred CCCCEEEEEeCCC-CCCceEEEECCCCCCCC-CCcEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCcc-
Q 017284 130 EYDTKYYYKIGDG-DSSREFWFQTPPKIHPD-APYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYN- 206 (374)
Q Consensus 130 ~p~t~Y~Y~v~~~-~~s~~~~F~T~p~~~~~-~~~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~- 206 (374)
+|||+|+|||+.+ .+|++++|+|+|.+++. .++||+++||.+.......++.++.+.++|||||+||++|+++....
T Consensus 83 ~P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~ 162 (527)
T 2yeq_A 83 EPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYV 162 (527)
T ss_dssp CTTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSC
T ss_pred CCCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCccc
Confidence 9999999999875 46899999999987654 58999999999876555678888888899999999999998764210
Q ss_pred ------------c------cchhhHHHH--HHHHHhhhcCCeEEcCCCcccccCCCCCCcc------cc-----cccccc
Q 017284 207 ------------D------VGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI------PF-----KSYLHR 255 (374)
Q Consensus 207 ------------~------~~~~w~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~------~~-----~~y~~~ 255 (374)
+ +..+|..+. ..++++.+.+|||+++||||+..+...+... .| .+++.+
T Consensus 163 ~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay 242 (527)
T 2yeq_A 163 SKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAY 242 (527)
T ss_dssp CTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHH
Confidence 0 111222221 2366778899999999999997542111000 01 234455
Q ss_pred c-ccCcCCC----CCCCCceEEEecCC-EEEEEEeCCCCC----------------------CCChHHHHHHHHHHhhcc
Q 017284 256 I-ATPYTAS----KSTNPLWYAIRRAS-AHIIVLSSYSPY----------------------VKYTPQWWWLREELKKVD 307 (374)
Q Consensus 256 f-~~p~~~~----~~~~~~~ysf~~g~-v~fi~Ldt~~~~----------------------~~~~~Q~~WL~~~L~~~~ 307 (374)
| .||.+.. +...+.||+|++|+ ++||+|||+..- ..+.+|++||+++|++
T Consensus 243 ~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~-- 320 (527)
T 2yeq_A 243 YEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS-- 320 (527)
T ss_dssp HHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH--
T ss_pred HHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc--
Confidence 5 3565421 23457899999999 999999996411 1478999999999998
Q ss_pred CCCCCeEEEEecccceecCCC----------CCCCCHHHHHHHHHHHHHcCCc--EEEEcCccccccccc
Q 017284 308 REKTPWLIVLMHVPLYSSNVV----------HYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERSVR 365 (374)
Q Consensus 308 ~~~~~w~iv~~H~P~y~~~~~----------~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~yeR~~~ 365 (374)
++++|+||+.|+|++..... .+......|+.|+++|.+++|+ +||+||+|.++++..
T Consensus 321 -s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 321 -STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp -CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred -CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 67899999999999875321 1223356799999999999995 999999999999753
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-30 Score=242.22 Aligned_cols=193 Identities=15% Similarity=0.192 Sum_probs=134.2
Q ss_pred CCcEEEEEecCCCCCCcHHHH----HHHHH-hCCCeEEecccccccCCCCccccchhhHHHH-HHHHHh--hhcCCeEEc
Q 017284 160 APYTFGIIGDLGQTYNSLSTL----KHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWG-RFIEQS--AAYQPWIWS 231 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~~~l----~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~-~~~~~~--~~~~P~~~v 231 (374)
.++||+++||+|.+...+..+ .++.+ .+|||||++||++|. +....+ +.+|.+.+ +..... ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~-d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLN-DPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTT-CTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCc-cHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 468999999999865443322 22333 399999999999997 432222 44554332 222222 346899999
Q ss_pred CCCcccccCCCCCCccc-------------------ccccccccccCcCCCCCCCCceEEE----ec---------C---
Q 017284 232 AGNHEIEFMPNMGEVIP-------------------FKSYLHRIATPYTASKSTNPLWYAI----RR---------A--- 276 (374)
Q Consensus 232 ~GNHD~~~~~~~~~~~~-------------------~~~y~~~f~~p~~~~~~~~~~~ysf----~~---------g--- 276 (374)
+||||+..+.. .+.. ......||.|| +.||+| .. |
T Consensus 80 lGNHD~~~~~~--aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P--------~~yY~~~~~f~~~~~~~~~~~g~~~ 149 (342)
T 3tgh_A 80 LGTRDWTGNYN--AQLLKGQGIYIEKNGETSIEKDADATNYPKWIMP--------NYWYHYFTHFTVSSGPSIVKTGHKD 149 (342)
T ss_dssp CCHHHHTSCHH--HHHHHHHC---------------CCCSSCEEECS--------SSSEEEEEEEEEC---------CEE
T ss_pred CCCCccCCCch--HhhhhhhcccccccccccccccccccCCCCccCC--------cceEEEEEEeeccccccccccCCCC
Confidence 99999864321 1111 12245678887 367765 32 3
Q ss_pred -CEEEEEEeCCCCCC----------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHH
Q 017284 277 -SAHIIVLSSYSPYV----------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFV 345 (374)
Q Consensus 277 -~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~ 345 (374)
.++||+|||+.... ...+|++||+++|++ ++|+||++|+|+|++... .....+++.|+++|+
T Consensus 150 ~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~ 222 (342)
T 3tgh_A 150 LAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLK 222 (342)
T ss_dssp EEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHH
T ss_pred ceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHH
Confidence 39999999964211 125899999999943 479999999999987642 244678899999999
Q ss_pred HcCCcEEEEcCcccccccccccCCceec
Q 017284 346 HSRVDFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 346 ~~~VdlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
+++|+++|+||+|.|+|+.+ ++++++
T Consensus 223 ~~~VdlvlsGH~H~~~~~~~--~g~~~i 248 (342)
T 3tgh_A 223 DAEVDLYISGHDNNMEVIED--NDMAHI 248 (342)
T ss_dssp HTTCCEEEECSSSSEEEEEE--TTEEEE
T ss_pred HcCCCEEEECCCcceeEEee--CCcEEE
Confidence 99999999999999999975 445543
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-27 Score=218.16 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=132.4
Q ss_pred CCcEEEEEecCCCCCCc----------HHHHHH-HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHh-----h
Q 017284 160 APYTFGIIGDLGQTYNS----------LSTLKH-YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS-----A 223 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~----------~~~l~~-~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~-----~ 223 (374)
.++||+++||+|..... ...+.+ +.+.+|||||++||++|.++..... .. .|.+.++.+ .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-~~---~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DK---RFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CT---HHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-hH---HHHHHHHHHcCchhh
Confidence 58999999999987421 122333 2334999999999999876543221 22 233333332 2
Q ss_pred hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEec------CCEEEEEEeCCCC---------
Q 017284 224 AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR------ASAHIIVLSSYSP--------- 288 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~------g~v~fi~Ldt~~~--------- 288 (374)
+.+|+++++||||...+. .....|.....+|.+| ..||++.+ ++++||+|||...
T Consensus 81 ~~~p~~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNV--SAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSCH--HHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCCc--cccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 268999999999985321 0111122223445444 46888887 4899999998530
Q ss_pred -----C---CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 289 -----Y---VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 289 -----~---~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
. ....+|++||+++|++. ..+|+||++|+|+++.... .....+++.+.++|.+++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 0 12478999999999984 4589999999999976542 123566789999999999999999999999
Q ss_pred cccccccCCcee
Q 017284 361 ERSVRMSFPFHF 372 (374)
Q Consensus 361 eR~~~~~~~~h~ 372 (374)
++..+. +++++
T Consensus 226 ~~~~~~-~g~~~ 236 (313)
T 1ute_A 226 QYLQDE-NGLGF 236 (313)
T ss_dssp EEEECT-TCCEE
T ss_pred hhccCC-CCceE
Confidence 988643 44444
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=187.64 Aligned_cols=196 Identities=19% Similarity=0.146 Sum_probs=128.4
Q ss_pred CCcEEEEEecCCCCCCc----------------HHHH----HHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYNS----------------LSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~----------------~~~l----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
..+||+++||+|..... ...+ +.+.+.+||+||++||+++...... ...++.+...+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~---~~~~~~~~~~~ 80 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR---DASDRALDTVM 80 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---TCHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcc---hHHHHHHHHHH
Confidence 47999999999987521 1223 3344458999999999997432110 11234444444
Q ss_pred HHhhh-cCCeEEcCCCcccccCCCCCCcccccccccccc-------------cCcCCCCCCCCceEEEec-CCEEEEEEe
Q 017284 220 EQSAA-YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA-------------TPYTASKSTNPLWYAIRR-ASAHIIVLS 284 (374)
Q Consensus 220 ~~~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~-------------~p~~~~~~~~~~~ysf~~-g~v~fi~Ld 284 (374)
+.+.. .+|+++++||||..... ...+...+. +|. ....||+|+. ++++||+||
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld 148 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFYNFS-------RPSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLD 148 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHHHCC-------HHHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECC
T ss_pred HHHHhcCCcEEEecCCCCcccCC-------HHHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEc
Confidence 44432 57999999999984210 011222221 221 2457899998 899999999
Q ss_pred CCCC----------------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 285 SYSP----------------------------------------------YVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 285 t~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
+... .....+|++||+++|+++.+ ...++||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~ 227 (322)
T 2nxf_A 149 AYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFS 227 (322)
T ss_dssp TTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEE
T ss_pred CceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEE
Confidence 9641 01247899999999998632 245789999
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccCCceec
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
|+|++....... .....++.+.+++.++ +|+++|+||+|.+++... .+|++++
T Consensus 228 H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-~~g~~~i 281 (322)
T 2nxf_A 228 HLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-SSGAQHI 281 (322)
T ss_dssp SSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-TTSCEEE
T ss_pred ccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-cCCceEE
Confidence 999987543210 0111356888999999 799999999999988652 4566554
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=188.82 Aligned_cols=181 Identities=23% Similarity=0.222 Sum_probs=125.8
Q ss_pred CCCcEEEEEecCCCCCC---------cH----HHHHHHHH--hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 159 DAPYTFGIIGDLGQTYN---------SL----STLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~---------~~----~~l~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
..++||+++||+|.... .. .+++.+.+ .++|+||++||+++... ...+..+.+.++++.
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l~ 96 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFA 96 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC------HHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHHHH
Confidence 45899999999997421 12 23445555 48999999999996432 344556666676663
Q ss_pred h--cCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHH
Q 017284 224 A--YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWW 297 (374)
Q Consensus 224 ~--~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~ 297 (374)
. .+|+++++||||... .+...+... .......+|+++.++++||+||+.... ....+|++
T Consensus 97 ~~~~~pv~~v~GNHD~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~ 162 (330)
T 3ib7_A 97 AQLGAELVWVMGNHDDRA-----------ELRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162 (330)
T ss_dssp HHHTCEEEECCCTTSCHH-----------HHHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHH
T ss_pred hhcCCCEEEeCCCCCCHH-----------HHHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHH
Confidence 3 689999999999742 122222110 111346789999999999999997532 24689999
Q ss_pred HHHHHHhhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 298 WLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 298 WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
||++.|++.. ...+|+++|||++....... ......++.+.+++.+++++++|+||+|....
T Consensus 163 wl~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 163 WLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp HHHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred HHHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 9999998852 23478889999876532211 01112356788999999999999999999764
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=179.06 Aligned_cols=180 Identities=13% Similarity=0.099 Sum_probs=120.3
Q ss_pred cEEEEEecCCCCCC---------cHHHH----HHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC
Q 017284 162 YTFGIIGDLGQTYN---------SLSTL----KHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~---------~~~~l----~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~ 226 (374)
+||+++||+|.... ....+ +.+.+. ++|+||++||+++... ...|+.+.+.++.+ .+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l--~~ 72 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhc--CC
Confidence 58999999998741 12333 344443 6899999999996432 23344555555443 57
Q ss_pred CeEEcCCCcccccCCCCCCccccccccccc-ccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHHHHHH
Q 017284 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRI-ATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLRE 301 (374)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f-~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 301 (374)
|+++++||||..... . ..+...| ..+.+ ....+|+++.++++||+||+.... ....+|++||++
T Consensus 73 p~~~v~GNHD~~~~~----~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~ 141 (274)
T 3d03_A 73 PLYLIPGNHDDKALF----L---EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEA 141 (274)
T ss_dssp CEEEECCTTSCHHHH----H---HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH----H---HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHH
Confidence 999999999974210 0 1111111 11110 023678999999999999996532 246899999999
Q ss_pred HHhhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcCccccccc
Q 017284 302 ELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (374)
Q Consensus 302 ~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 363 (374)
.|++. +.+++|+++|+|++....... ......++.+.+++.++ +|+++|+||+|.+...
T Consensus 142 ~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 142 QLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp HHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred HHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 99984 346899999999987542110 01111245788999998 8999999999998764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-19 Score=174.17 Aligned_cols=198 Identities=14% Similarity=0.095 Sum_probs=123.7
Q ss_pred CCCcEEEEEecCCCCCC-----------------------cHHHHH----HHHHhCCCeEEecccccccCCCCccccchh
Q 017284 159 DAPYTFGIIGDLGQTYN-----------------------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIR 211 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-----------------------~~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~ 211 (374)
+.++||++++|+|.... ....++ .+.+.+||+||++||+++... ...
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~ 110 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE------KTS 110 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC------HHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC------HHH
Confidence 46899999999998532 122333 333459999999999996432 233
Q ss_pred hHHHHHHHHHhhh-cCCeEEcCCCcccccCCCCC--Cc-------ccccccccccccCc-CCC---CCCCCceEEEecCC
Q 017284 212 WDSWGRFIEQSAA-YQPWIWSAGNHEIEFMPNMG--EV-------IPFKSYLHRIATPY-TAS---KSTNPLWYAIRRAS 277 (374)
Q Consensus 212 w~~~~~~~~~~~~-~~P~~~v~GNHD~~~~~~~~--~~-------~~~~~y~~~f~~p~-~~~---~~~~~~~ysf~~g~ 277 (374)
++.+.+.++.+.. .+|+++++||||........ .. .....|...|.... ... ......|+.+..++
T Consensus 111 ~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 111 HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 4555556666543 68999999999985321100 00 00011222222100 000 00123444556789
Q ss_pred EEEEEEeCCCC------------CCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHH
Q 017284 278 AHIIVLSSYSP------------YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWF 344 (374)
Q Consensus 278 v~fi~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll 344 (374)
++||+||+... .....+|++||++.|+++.. +...+|+++|+|++....... ......++.+.+++
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll 269 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDAL 269 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHH
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHH
Confidence 99999999642 12467999999999988642 245689999999986432110 00112356788999
Q ss_pred HHcCCcEEEEcCccccccc
Q 017284 345 VHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 345 ~~~~VdlvlsGH~H~yeR~ 363 (374)
.+++|+++|+||+|.....
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997653
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-15 Score=131.94 Aligned_cols=169 Identities=9% Similarity=0.025 Sum_probs=96.6
Q ss_pred CcEEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~~ 238 (374)
.+||+++||+|....... .++.+.+.++|+||++||++..... . +.+.+.++.+.. ..|+++++||||..
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~-----~---~~~~~~~~~l~~~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----S---RDYAAFFRILSEAHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----H---HHHHHHHHHHGGGCSCEEEECCTTSCS
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCC-----H---HHHHHHHHHHHhcCCcEEEECCCCCch
Confidence 589999999998643222 2333344489999999999964311 2 223333444433 57999999999974
Q ss_pred cCCCCCCcccccccccccc----cCcCCCCCCCCceEEEecC-CEEEEEEeCCC--CCCCChH--------HHHHHHHHH
Q 017284 239 FMPNMGEVIPFKSYLHRIA----TPYTASKSTNPLWYAIRRA-SAHIIVLSSYS--PYVKYTP--------QWWWLREEL 303 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f~----~p~~~~~~~~~~~ysf~~g-~v~fi~Ldt~~--~~~~~~~--------Q~~WL~~~L 303 (374)
.. ......+. .|.... ..+. .+.++ ++.|+.++... ++....+ +.+|+++.|
T Consensus 77 ~~---------~~~~~~~~~~~~~~~~~~--l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 77 IW---------EYLREAANVELVHPEMRN--VHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp HH---------HHHHHHHHHHHHCTTEEE--CBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGG
T ss_pred hH---------HHHHhhhhhhccCcceEE--cccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHH
Confidence 21 00111110 010000 0111 24455 78999887421 1111122 234445555
Q ss_pred hhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 304 KKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 304 ~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
++.. ..++|+++|+|++.....+ .+ .+.+.+++.+++++++++||+|
T Consensus 144 ~~~~---~~~~il~~H~p~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 144 WELK---DYPKIFLFHTMPYHKGLNE--QG---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GGSC---SCCEEEEESSCBCBTTTBT--TS---BHHHHHHHHHHCCSEEEECCSS
T ss_pred HhCC---CCCeEEEEccCcccCCccc--cC---HHHHHHHHHHhCCCEEEEcccc
Confidence 5532 2468999999997642111 11 1356677888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-14 Score=129.38 Aligned_cols=186 Identities=11% Similarity=0.086 Sum_probs=98.3
Q ss_pred CcEEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCcc--------cc--chh--------hHHHHHHHHH
Q 017284 161 PYTFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYN--------DV--GIR--------WDSWGRFIEQ 221 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~--------~~--~~~--------w~~~~~~~~~ 221 (374)
++||+++||+|....... .++.+.+.++|+||++||++........ .+ ... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 589999999998765433 3445555599999999999953211000 00 000 0223344454
Q ss_pred hhh-cCCeEEcCCCcccccCCCCCCcccccccccccc-cCcCCCCCCCCceEEEecCCEEEEEEeCCCCC-CCChHHH--
Q 017284 222 SAA-YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA-TPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-VKYTPQW-- 296 (374)
Q Consensus 222 ~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~-~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-~~~~~Q~-- 296 (374)
+.. ..|+++++||||..... .+........ .|... .......+.++++.|++++..... ....+|.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~------~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 155 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI------FLRAAYEAETAYPNIR---VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 155 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH------HHHHHHHTTTTCTTEE---ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHhcCCcEEEEcCCCCchhhh------hHHHHhhhccCCcceE---EecCcceEEECCEEEEecCCCcCCCCcCHHHHhh
Confidence 443 57999999999974210 0000000000 00000 000112377889999999753210 1111222
Q ss_pred --HHHH----HHHhhccCCCCCeEEEEecccceecCCCCC--CCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 297 --WWLR----EELKKVDREKTPWLIVLMHVPLYSSNVVHY--MEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 297 --~WL~----~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~--~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.|+. +.|++. .....|+++|+|++....... .......+.+.+++.+++++++++||+|
T Consensus 156 ~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 156 YPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred cchhhHHHHHHHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 1433 334432 223468889999875311000 0000012356677888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.43 E-value=6.1e-14 Score=132.77 Aligned_cols=189 Identities=14% Similarity=0.108 Sum_probs=97.1
Q ss_pred CCcEEEEEecCCCC----CC--c-------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHh
Q 017284 160 APYTFGIIGDLGQT----YN--S-------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (374)
Q Consensus 160 ~~~~f~v~gD~~~~----~~--~-------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~ 222 (374)
..+||+++||+|.+ .. . ...+++ +.+.++|+||++||++++...+. ......+.+.++.+
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~---~~~~~~~~~~l~~L 93 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKRM 93 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCC---HHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCC---HHHHHHHHHHHHHH
Confidence 57999999999966 21 1 233333 33449999999999443333221 12223455566665
Q ss_pred hhcCCeEEcCCCcccccCCCCCCcccccccccc----cccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC-------CC
Q 017284 223 AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR----IATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-------VK 291 (374)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~----f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-------~~ 291 (374)
...+|+++++||||... .. .+..+... +.+-.+.. ......++.+++.|++++..... ..
T Consensus 94 ~~~~pv~~i~GNHD~~~---~~---~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~ 164 (336)
T 2q8u_A 94 MRTAPVVVLPGNHDWKG---LK---LFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNEGD 164 (336)
T ss_dssp HHHSCEEECCC---------CH---HHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCSSH
T ss_pred HhcCCEEEECCCCCccc---cc---cHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhhHH
Confidence 43389999999999742 10 01111110 11110000 00011122356889888653221 11
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHH-H-HHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 292 YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES-M-RAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 292 ~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~-~-r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
..+|.+|+.+.|...-+....++|++.|.|++..... +++. . ...+...+.+.++|++++||+|..+..
T Consensus 165 ~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 165 FRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEEccccCceEe
Confidence 2467899988886521013468999999998643211 0000 0 000111233468999999999997653
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.9e-11 Score=114.34 Aligned_cols=176 Identities=15% Similarity=0.027 Sum_probs=93.5
Q ss_pred CCCcEEEEEecCCCCCCc----------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh
Q 017284 159 DAPYTFGIIGDLGQTYNS----------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA 224 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~----------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~ 224 (374)
..++||+++||+|.+... ...+.+ +.+.++|+||++||++..... . ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p-~---~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRP-P---VKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSC-C---HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC-C---HHHHHHHHHHHHHHHh
Confidence 357999999999987421 122333 333489999999999854321 1 2233445566666654
Q ss_pred -cCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHH---H
Q 017284 225 -YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL---R 300 (374)
Q Consensus 225 -~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL---~ 300 (374)
.+|+++++||||....... ..+...+...+..-. ...++..+-+++.|++++...... .....+|| .
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~--~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~ 164 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGE--ESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFE 164 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTS--CCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccc--cCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhh
Confidence 4899999999997532110 001011111011000 011222222458899997654321 12223333 3
Q ss_pred HHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 301 EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 301 ~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
..+. ...++|+++|.|+.......+... +. .+ .++|++++||+|...
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~-~l--~~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYELE------HF-DL--PKFSYYALGHIHKRI 211 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCSSC------GG-GS--CCCSEEEECSCCSCE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcccC------HH-Hh--hhCCeEEccCCCCCc
Confidence 3221 234689999998753211000000 01 11 139999999999864
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-11 Score=113.14 Aligned_cols=186 Identities=14% Similarity=0.061 Sum_probs=94.3
Q ss_pred CCCcEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 159 DAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
...+||+++||+|...... .-.++|+||++||++.... ......+.+.++.+. ..|+++++||||..
T Consensus 57 ~~~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g~------~~e~~~~~~~L~~l~-~~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELGL------PSEVKKFNDWLGNLP-YEYKIVIAGNHELT 123 (296)
T ss_dssp TTEEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSCC------HHHHHHHHHHHHTSC-CSEEEECCCTTCGG
T ss_pred CCCeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCCC------HHHHHHHHHHHHhCC-CCeEEEEcCCcccc
Confidence 3568999999999875421 1138999999999996432 222233444444331 24589999999985
Q ss_pred cCCCCCCccccccccc--cc-ccCcC---CCCC-CCCce----EEEecCCEEEEEEeCCCCCCC---ChHHHHHHHHHHh
Q 017284 239 FMPNMGEVIPFKSYLH--RI-ATPYT---ASKS-TNPLW----YAIRRASAHIIVLSSYSPYVK---YTPQWWWLREELK 304 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~--~f-~~p~~---~~~~-~~~~~----ysf~~g~v~fi~Ldt~~~~~~---~~~Q~~WL~~~L~ 304 (374)
.+...-+...-..+.. .+ ..+.. .... ..+.. -+..++++.|++..-...++. ..++.+++.+.+.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~ 203 (296)
T 3rl5_A 124 FDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWN 203 (296)
T ss_dssp GCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHT
T ss_pred cchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHh
Confidence 4321000000000000 00 00000 0000 01111 245567889888443221221 1222234444444
Q ss_pred hccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHH-HHcCCcEEEEcCcccc
Q 017284 305 KVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWF-VHSRVDFIFAGHVHAY 360 (374)
Q Consensus 305 ~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll-~~~~VdlvlsGH~H~y 360 (374)
.. .....|++.|.|++....... .....-.+.+...+ ++.+++++++||+|..
T Consensus 204 ~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~ 258 (296)
T 3rl5_A 204 LI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEG 258 (296)
T ss_dssp TS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGG
T ss_pred hC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCC
Confidence 43 123458899999987533110 00000112444555 6899999999999985
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-11 Score=111.65 Aligned_cols=169 Identities=6% Similarity=-0.079 Sum_probs=88.5
Q ss_pred cEEEEEecCCCCCCc-HHHHHHHH---Hh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNS-LSTLKHYM---QS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~~~l~~~~---~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
+|++++||+|..... ...++.+. +. ++|++|++||++..... . .+..+.+..+....|++.++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-----~---~~~~~~l~~l~~~~~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-----P---KEVIEVIKDLTKKENVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-----H---HHHHHHHHHHHHHSCEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-----H---HHHHHHHHhhHhhcCeeEEecch
Confidence 589999999975432 23344555 55 79999999999953221 1 23334444444346899999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC---CCChHHHHHHHHHHhhccCCCCC
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
|.......... ..+... .. ++..... ... ..+ ....+|++||++........-..
T Consensus 74 D~~~~~~~~~~---~~~~~~--~~-------------~~~~~~~---~~~-~~~~~~~l~~~~~~~L~~lp~~~~~~~~~ 131 (252)
T 1nnw_A 74 DQIIAMSDPHA---TDPGYI--DK-------------LELPGHV---KKA-LKFTWEKLGHEGREYLRDLPIYLVDKIGG 131 (252)
T ss_dssp HHHHHHSCTTC---SSSGGG--GG-------------SSCCHHH---HHH-HHHHHHHHHHHHHHHHHTSCSCEEEEETT
T ss_pred HHHhhcccccc---CCcccc--cc-------------hhhhHHH---HHH-HHHHHHHCCHHHHHHHHhCCceEEEeeCC
Confidence 97421000000 000000 00 0000000 000 000 12357888887633221111123
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 361 (374)
.+|+++|++++....... ......+.+..++.++ +++++++||+|...
T Consensus 132 ~~i~~~H~~p~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~ 180 (252)
T 1nnw_A 132 NEVFGVYGSPINPFDGEV-LAEQPTSYYEAIMRPVKDYEMLIVASPMYPV 180 (252)
T ss_dssp EEEEEESSCSSCTTTCCC-CSSCCHHHHHHHHGGGTTSSEEEESTTCSEE
T ss_pred cEEEEEcCCCCCCccccc-CCCCCHHHHHHHHhcCCCCCEEEECCccccc
Confidence 468888988743221110 1111124667778888 99999999999854
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.18 E-value=5e-11 Score=114.52 Aligned_cols=188 Identities=14% Similarity=0.144 Sum_probs=99.7
Q ss_pred cEEEEEecCCCCCC----c---------HHHHHHH----HHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh
Q 017284 162 YTFGIIGDLGQTYN----S---------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA 224 (374)
Q Consensus 162 ~~f~v~gD~~~~~~----~---------~~~l~~~----~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~ 224 (374)
+||++++|+|.+.. . ...+.++ .+.++|+||++||+..+...+. ...+..+.+.++.+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~---~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCC---HHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCC---HHHHHHHHHHHHHHHh
Confidence 58999999998653 1 1233333 3449999999999994332221 2334455566666654
Q ss_pred cCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEe--cC-CEEEEEEeCCCCCC----CChHHHH
Q 017284 225 YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIR--RA-SAHIIVLSSYSPYV----KYTPQWW 297 (374)
Q Consensus 225 ~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~--~g-~v~fi~Ldt~~~~~----~~~~Q~~ 297 (374)
.+|+++++||||.... ..+...... ++.+..-.....-+.+. .| .+.|..+.-..... ....+.+
T Consensus 78 ~~~v~~i~GNHD~~~~------~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGL------KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTH------HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccC------ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 4899999999995310 000011100 11000000000112222 34 47777775422111 1356789
Q ss_pred HHHHHHhhc---cCCCCCeEEEEecccceecCCCCCCCCHH-HHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 298 WLREELKKV---DREKTPWLIVLMHVPLYSSNVVHYMEGES-MRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 298 WL~~~L~~~---~~~~~~w~iv~~H~P~y~~~~~~~~~~~~-~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
|+.+.|++. ......+.|++.|.++....... +.+. +...+...+...++|.|+.||.|..+.
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~--~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~ 216 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA--GIEQGREIIINRALIPSVVDYAALGHIHSFRE 216 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCC--CCccccccccCHHHcCcCCCEEEcccccCCeE
Confidence 999998721 11245678999999875432100 0000 001111122246799999999999754
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.1e-10 Score=98.62 Aligned_cols=136 Identities=17% Similarity=0.240 Sum_probs=82.2
Q ss_pred cEEEEEecCCCCCCcH----------H----HHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc
Q 017284 162 YTFGIIGDLGQTYNSL----------S----TLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~----------~----~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~ 225 (374)
++++++||+|.+.... . .++.+.+. ++|+|+++||++... . + +....+.++.+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~---~----~~~~~~~l~~l~-- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-N---D----KNEYLRIWKALP-- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-C---C----TTSHHHHHHHSS--
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-h---h----HHHHHHHHHHCC--
Confidence 5899999999764321 1 12233332 799999999999642 1 1 123344444442
Q ss_pred CCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhh
Q 017284 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (374)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 305 (374)
.|++.++||||... ..+...| -+ + .+..||+ +
T Consensus 72 ~~~~~v~GNhD~~~----------~~~~~~~--------------~~----------l----------~~~~~l~----~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDK----------ESLKEYF--------------DE----------I----------YDFYKII----E 103 (195)
T ss_dssp SEEEEECCTTCCCH----------HHHTTTC--------------SE----------E----------ESSEEEE----E
T ss_pred CCEEEEeCCCCCch----------hhhhhhh--------------hc----------h----------hHHHHHH----h
Confidence 48999999999732 0111111 00 0 0111221 1
Q ss_pred ccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 306 ~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
. ..++|+++|.|++......+ ....+.+.+++.+++++++++||+|....
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 23579999999876543221 23356888889999999999999998654
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=92.24 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=41.6
Q ss_pred CCcEEEEEecCCCCCC---cHHHHHHHH-HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 160 APYTFGIIGDLGQTYN---SLSTLKHYM-QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~---~~~~l~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
..+||+++||+|.... ....+..+. +.++|+|+++||++. ....+.++.+ ..|++.++|||
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-------------~~~~~~l~~~--~~~~~~v~GNh 73 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGDF 73 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCTT
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-------------HHHHHHHHhc--CCCEEEEcCCc
Confidence 3589999999997532 223343332 237999999999983 1222333333 25899999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 74 D~~ 76 (192)
T 1z2w_A 74 DEN 76 (192)
T ss_dssp CCC
T ss_pred Ccc
Confidence 963
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-10 Score=101.97 Aligned_cols=149 Identities=14% Similarity=0.148 Sum_probs=83.4
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+|++++||+|... ..+.++.+. ++|.++++||++..... . .+..+.+..+ .+++.+.||||..
T Consensus 3 ~mri~~isDiHg~~---~~l~~~l~~~~~~d~ii~~GDl~~~g~~-----~---~~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 3 AMRILIISDVHANL---VALEAVLSDAGRVDDIWSLGDIVGYGPR-----P---RECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCEEEECCCTTCH---HHHHHHHHHHCSCSEEEECSCCSSSSSC-----H---HHHHHHHHHH---CSSEECCCHHHHH
T ss_pred CcEEEEEeecCCCH---HHHHHHHHhccCCCEEEECCCcCCCCCC-----H---HHHHHHHHhc---CCCEEEeCchHHH
Confidence 57999999999543 334433332 89999999999953221 1 2233333333 2368999999975
Q ss_pred cCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
....... ..+..... ....|. .-....++.+||++...... .. .++++
T Consensus 69 ~~~~~~~----~~~~~~~~--------~~~~~~----------------~~~l~~~~~~~L~~lp~~~~--~~--~i~~~ 116 (246)
T 3rqz_A 69 CIGRLSL----DEFNPVAR--------FASYWT----------------TMQLQAEHLQYLESLPNRMI--DG--DWTVV 116 (246)
T ss_dssp HTCCCCC----C--CGGGG--------CHHHHH----------------HHHCCHHHHHHHHHCCSEEE--ET--TEEEE
T ss_pred HhccCCc----cccCHHHH--------HHHHHH----------------HHHcCHHHHHHHHhCCcEEE--EC--CEEEE
Confidence 3211000 00000000 000000 00235688999986443321 11 47778
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
|.++..... .+... ...+..+|.+++++++|+||+|.
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~ 153 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHV 153 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSS
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCc
Confidence 887764321 11111 24567788899999999999997
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.2e-10 Score=104.95 Aligned_cols=165 Identities=14% Similarity=0.113 Sum_probs=86.7
Q ss_pred CCcEEEEEecCCCCCCcH-HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 160 APYTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~-~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+.|++++||+|...... ..++.+.+.++|.|+++||++..... . .+..+.++.+ .|++.+.||||..
T Consensus 10 ~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~-----~---~~~~~~l~~~---~~~~~v~GNhD~~ 78 (270)
T 3qfm_A 10 DMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTG-----R---RRILDLLDQL---PITARVLGNWEDS 78 (270)
T ss_dssp -CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSC-----S---HHHHHHHHTS---CEEEECCCHHHHH
T ss_pred cccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC-----H---HHHHHHHHcc---CCEEEEcCChHHH
Confidence 578999999999753222 23444545589999999999953221 1 2333333332 4789999999974
Q ss_pred cCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
.......... +..|. ..+.+ .. + ....-....+|++||++-.......-...+|+++
T Consensus 79 ~~~~~~~~~~-------~~~~~-------~~~~~----~~----~-~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lv 135 (270)
T 3qfm_A 79 LWHGVRKELD-------STRPS-------QRYLL----RQ----C-QYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGIS 135 (270)
T ss_dssp HHHHHTTCSC-------TTSHH-------HHHHH----HH----H-HHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEE
T ss_pred HHHhhccccC-------CCcHH-------HHHHH----HH----H-HHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEE
Confidence 2100000000 00000 00000 00 0 0000124578889988643332111123567788
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
|..+..... +......-.+.+..++.+.++|++|+||+|.
T Consensus 136 Hg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~ 175 (270)
T 3qfm_A 136 HHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQ 175 (270)
T ss_dssp SSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCS
T ss_pred ECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCc
Confidence 876543211 1111111234566777788999999999996
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=100.96 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=49.7
Q ss_pred cEEEEEecCCCCCCc----------HHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cC
Q 017284 162 YTFGIIGDLGQTYNS----------LSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~----------~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~ 226 (374)
+||+++||+|.+... ...+. .+.+.++|+||++||++..... . ...+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~-~---~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP-S---PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC-C---HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCC-C---HHHHHHHHHHHHHHHHCCC
Confidence 589999999987531 12233 3334599999999999864321 1 2234555566666653 68
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|++.++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-09 Score=95.90 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=44.0
Q ss_pred CcEEEEEecCCCCCC---cHHHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcc
Q 017284 161 PYTFGIIGDLGQTYN---SLSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~---~~~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD 236 (374)
.+|++++||+|.... ....+..+.+ .++|+|+++||++. .+..+.++.+ ..|++.++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 589999999998642 2244555443 48999999999983 1223334433 358999999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 90 ~~ 91 (215)
T 2a22_A 90 SA 91 (215)
T ss_dssp CS
T ss_pred Cc
Confidence 74
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.1e-09 Score=93.13 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=41.7
Q ss_pred CcEEEEEecCCCCCCc-HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~-~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+|++++||+|..... ...++.+.+.++|+|+++||++. . ...+.++.+ ..|++.++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~---------~----~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVS---------L----FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCS---------T----HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCC---------H----HHHHHHHhc--CCCEEEEeCCCcch
Confidence 3899999999954221 12333444458999999999973 1 122222222 46999999999974
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.91 E-value=6.3e-09 Score=88.80 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=69.5
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh---CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS---GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~---~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
.+|++++||+|.. ...+.++.+. ++|+|+++||+.+. .++.+.. |++.+.||||.
T Consensus 6 ~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~-----------------~l~~l~~--~~~~v~GNhD~ 63 (176)
T 3ck2_A 6 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR-----------------PDSPLWE--GIRVVKGNMDF 63 (176)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC-----------------TTCGGGT--TEEECCCTTCC
T ss_pred CcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH-----------------HHHhhhC--CeEEecCcccc
Confidence 4799999999954 2333333322 79999999997421 0112222 89999999996
Q ss_pred ccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVL 317 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~ 317 (374)
.. .+|. .. .+ + -...+|++
T Consensus 64 ~~-----------------~~p~---------~~--------~~-----------------------~----~~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RL--------VT-----------------------E----LGSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EE--------EE-----------------------E----ETTEEEEE
T ss_pred hh-----------------cCCc---------EE--------EE-----------------------E----ECCeEEEE
Confidence 31 0120 00 00 0 01257888
Q ss_pred ecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 318 ~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+|.|++.... .. +.+..++.+.+++++++||+|...
T Consensus 83 ~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~ 118 (176)
T 3ck2_A 83 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPS 118 (176)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEE
T ss_pred ECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCC
Confidence 9998864321 11 345667788999999999999854
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.9e-08 Score=96.89 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=31.2
Q ss_pred CCCcEEEEEecCCCCCC---------cHHHH----HHHHHhCCCeEEecccccccC
Q 017284 159 DAPYTFGIIGDLGQTYN---------SLSTL----KHYMQSGGQSVLFLGDLSYAD 201 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~---------~~~~l----~~~~~~~~d~vl~~GD~~y~~ 201 (374)
...+||++++|+|.+.. ...++ +.+.+.++|+||++||++...
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~ 66 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDN 66 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSS
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCC
Confidence 46899999999998742 12233 334445999999999998643
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.80 E-value=3e-08 Score=95.96 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=50.6
Q ss_pred CCCcEEEEEecCCCCCCc---------HHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHh---
Q 017284 159 DAPYTFGIIGDLGQTYNS---------LSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS--- 222 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~---------~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~--- 222 (374)
...+||++++|+|.+... ...+. .+.+.+||+||++||+....... ......+.+.++.+
T Consensus 30 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~----~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 30 ENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPS----RKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCC----HHHHHHHHHHHHHHHBC
T ss_pred CCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHHhcc
Confidence 458999999999987431 12333 33445999999999998643321 22334444444433
Q ss_pred -------------------------------hhcCCeEEcCCCcccc
Q 017284 223 -------------------------------AAYQPWIWSAGNHEIE 238 (374)
Q Consensus 223 -------------------------------~~~~P~~~v~GNHD~~ 238 (374)
...+|++.+.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 1369999999999975
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.76 E-value=5.5e-08 Score=83.14 Aligned_cols=62 Identities=16% Similarity=0.076 Sum_probs=41.6
Q ss_pred CcEEEEEecCCCCCC---cHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 161 PYTFGIIGDLGQTYN---SLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~---~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
-+|++++||+|...+ ....+..+. .++|+|+++||++. .+..+.++.+ ..|++.+.||||.
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~-------------~~~~~~l~~~--~~~v~~V~GNhD~ 85 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVD-------------LDTVILLEKF--SKEFYGVHGNMDY 85 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSC-------------HHHHHHHHHH--TSSEEECCCSSSC
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCC-------------HHHHHHHHhc--CCCEEEEECCCCc
Confidence 479999999995222 223344333 58999999999984 1223333333 2599999999996
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 86 ~ 86 (178)
T 2kkn_A 86 P 86 (178)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-08 Score=100.40 Aligned_cols=174 Identities=16% Similarity=0.115 Sum_probs=91.4
Q ss_pred CCCcEEEEEecCCCCCC--------------cHH----HHHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYN--------------SLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~--------------~~~----~l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
...++|++++|+|.... ... .++++.+.++| ++|.+||++..... .. ........+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~--~~-~~~~~~~~~~l 103 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY--FN-QYRGLADRYFM 103 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH--HH-HHTTHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH--HH-HhCCcHHHHHH
Confidence 35799999999996421 112 23445555787 88999999853211 00 00112222333
Q ss_pred HHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC-----C-----CCCCceEEEecCC--EEEEEEeCCC
Q 017284 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-----K-----STNPLWYAIRRAS--AHIIVLSSYS 287 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~-----~-----~~~~~~ysf~~g~--v~fi~Ldt~~ 287 (374)
..+ -+-+.++||||+++.. ..+..+.+....|.-.. + .....|.-++.++ +.||.+.+..
T Consensus 104 n~l---g~d~~~lGNHEfd~g~-----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~ 175 (552)
T 2z1a_A 104 HRL---RYRAMALGNHEFDLGP-----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPD 175 (552)
T ss_dssp HHT---TCCEEECCGGGGTTCH-----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTT
T ss_pred Hhc---CCCccccccccccCCH-----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccc
Confidence 322 2347789999986421 01111111111111100 0 0123466677777 6677776632
Q ss_pred C-----C--C----CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEc
Q 017284 288 P-----Y--V----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAG 355 (374)
Q Consensus 288 ~-----~--~----~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsG 355 (374)
. - + ...++.+...++|++ .+...+|++.|.|.... ..+..+ .+||++|+|
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgG 237 (552)
T 2z1a_A 176 TREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGG 237 (552)
T ss_dssp HHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEEC
T ss_pred hhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeC
Confidence 0 0 0 011333444445554 35678999999885321 122233 589999999
Q ss_pred Cccccc
Q 017284 356 HVHAYE 361 (374)
Q Consensus 356 H~H~ye 361 (374)
|.|...
T Consensus 238 HtH~~~ 243 (552)
T 2z1a_A 238 HSHTLL 243 (552)
T ss_dssp SSCCCB
T ss_pred CcCccc
Confidence 999854
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.6e-08 Score=95.86 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=49.6
Q ss_pred CCCcEEEEEecCCCCCCc---------HHH----HHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHH----
Q 017284 159 DAPYTFGIIGDLGQTYNS---------LST----LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ---- 221 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~---------~~~----l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~---- 221 (374)
...+||++++|+|.+... ... ++.+.+.+||+||++||++...... ......+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps----~~a~~~~~~~Lr~~~~g 149 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPS----RKALYQALRSLRLNCLG 149 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCC----HHHHHHHHHHHHHHHBS
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHhccc
Confidence 468999999999987431 123 3344455999999999998644321 1122233333333
Q ss_pred --------h----------------------hhcCCeEEcCCCcccc
Q 017284 222 --------S----------------------AAYQPWIWSAGNHEIE 238 (374)
Q Consensus 222 --------~----------------------~~~~P~~~v~GNHD~~ 238 (374)
+ ...+|++.+.||||..
T Consensus 150 ~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 150 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp SCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1368999999999975
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=100.36 Aligned_cols=186 Identities=16% Similarity=0.101 Sum_probs=92.7
Q ss_pred CCcEEEEEecCCCCCCc-------H----HHHHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 160 APYTFGIIGDLGQTYNS-------L----STLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~-------~----~~l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
..++|++++|+|..... . ..++++.+. ++ +++|.+||++... +..+ ........+.+..+
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~--~~~~-~~~~~~~~~~ln~l- 82 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV--PESD-LQDAEPDFRGMNLV- 82 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSC--HHHH-TTTTHHHHHHHHHH-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCc--chhh-hcCCcHHHHHHhcc-
Confidence 46899999999975321 1 223444332 46 6999999997421 1000 01122333444443
Q ss_pred hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCC-------CC-CCCCceEEEecCC--EEEEEEeCCCC--CCC
Q 017284 224 AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-------SK-STNPLWYAIRRAS--AHIIVLSSYSP--YVK 291 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~-------~~-~~~~~~ysf~~g~--v~fi~Ldt~~~--~~~ 291 (374)
. +-+.++||||+..... .+.........|.-. .+ .....|.-++.++ +.||.+.+... +..
T Consensus 83 -g-~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 83 -G-YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp -T-CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred -C-CCEEeeccccccCCHH-----HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 2 3467899999864210 011111111111110 00 0112455677777 66777765431 110
Q ss_pred -----------ChHH-HHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccc
Q 017284 292 -----------YTPQ-WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 292 -----------~~~Q-~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
..++ .+|++ +|++. .+...+|+++|.|........ ........+...+...+||++|+||.|.
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~--~~~~~~~~la~~~~~~~iDlilgGHtH~ 230 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHG--SNAPGDVEMARALPAGSLAMIVGGHSQD 230 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCT--TSCCCHHHHHHHSCTTSSSEEECCSSCC
T ss_pred cCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCccc--ccCchHHHHHHhCCCCceeEEECCCCCc
Confidence 0122 23333 34431 256789999999986432211 1000112233333344599999999998
Q ss_pred cc
Q 017284 360 YE 361 (374)
Q Consensus 360 ye 361 (374)
..
T Consensus 231 ~~ 232 (516)
T 1hp1_A 231 PV 232 (516)
T ss_dssp BC
T ss_pred cc
Confidence 53
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=2.2e-07 Score=93.90 Aligned_cols=177 Identities=16% Similarity=0.095 Sum_probs=90.9
Q ss_pred CCCcEEEEEecCCCCCCc------------------HH----HHHHHHHhCCC-eEEecccccccCCCCccccchhhHHH
Q 017284 159 DAPYTFGIIGDLGQTYNS------------------LS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSW 215 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~------------------~~----~l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~ 215 (374)
...++|++++|+|..... .. .++++.+.+++ ++|.+||++...... . .......
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~ 86 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF--T-LFGGSAD 86 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH--H-TTTTHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee--e-ecCCHHH
Confidence 357999999999964211 22 23444444666 889999999532110 0 0111223
Q ss_pred HHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCC------CCC----CCCceEEEecCC--EEEEEE
Q 017284 216 GRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA------SKS----TNPLWYAIRRAS--AHIIVL 283 (374)
Q Consensus 216 ~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~------~~~----~~~~~ysf~~g~--v~fi~L 283 (374)
.+.+..+ -+-+.++||||+++.. ..+..+......|.-. .+. ....|.-++.++ +-||.+
T Consensus 87 ~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~ 158 (579)
T 3ztv_A 87 AAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGL 158 (579)
T ss_dssp HHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEE
T ss_pred HHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEE
Confidence 3333332 2345789999986421 0111111111112110 000 112455677777 667777
Q ss_pred eC-C-----CCCCC---ChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEE
Q 017284 284 SS-Y-----SPYVK---YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIF 353 (374)
Q Consensus 284 dt-~-----~~~~~---~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~Vdlvl 353 (374)
.+ . ..... .....+-+++.+++....+...+|+++|.+... ... +..+ .+||++|
T Consensus 159 t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~---la~~~~giDlIl 223 (579)
T 3ztv_A 159 DTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIE---IAQKVNDIDVIV 223 (579)
T ss_dssp ECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHH---HHHHCSSCCEEE
T ss_pred EcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCCEEE
Confidence 44 1 00011 122334455555544334577899999976421 111 2222 3799999
Q ss_pred EcCccccc
Q 017284 354 AGHVHAYE 361 (374)
Q Consensus 354 sGH~H~ye 361 (374)
+||.|...
T Consensus 224 gGHtH~~~ 231 (579)
T 3ztv_A 224 TGDSHYLY 231 (579)
T ss_dssp ECSSCCEE
T ss_pred eCCCCccc
Confidence 99999864
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.55 E-value=3.5e-07 Score=91.47 Aligned_cols=191 Identities=15% Similarity=0.128 Sum_probs=91.5
Q ss_pred CCCcEEEEEecCCCCCC-------------cHHH----HHHHHHhCCC-eEEecccccccCCCCccccc----hhhHHHH
Q 017284 159 DAPYTFGIIGDLGQTYN-------------SLST----LKHYMQSGGQ-SVLFLGDLSYADRYEYNDVG----IRWDSWG 216 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-------------~~~~----l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~----~~w~~~~ 216 (374)
...++|++++|+|.... .... ++++.+..++ ++|.+||++..... ..+. ..+....
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~--~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF--CNYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH--HHHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH--HHHHhhcccCcchHH
Confidence 35799999999996421 1222 3344444565 77889999853211 0000 0012222
Q ss_pred HHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC-----C--CCCCceEEEecCC--EEEEEEeCCC
Q 017284 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-----K--STNPLWYAIRRAS--AHIIVLSSYS 287 (374)
Q Consensus 217 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~-----~--~~~~~~ysf~~g~--v~fi~Ldt~~ 287 (374)
+.+..+ . +-+.++||||+++... .+..+......|.-.. + .....|.-++.++ +-||.+.+..
T Consensus 95 ~~ln~l--g-~D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM--A-FDFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT--C-CCEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc--C-CcEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 333322 2 3356899999864310 0111111111111100 0 0113366677887 5667776642
Q ss_pred C--CCC--------ChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC-C---CCHHHHHHHHHHHHHcCCcEEE
Q 017284 288 P--YVK--------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-M---EGESMRAVFESWFVHSRVDFIF 353 (374)
Q Consensus 288 ~--~~~--------~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-~---~~~~~r~~l~~ll~~~~Vdlvl 353 (374)
. +.. .....+.+++.+++.. .++..+|++.|.+.-....... . .++.....+..-+ ..+||++|
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIl 244 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAF-SKDIDIFI 244 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhc-CCCCcEEE
Confidence 1 110 1123444555544433 3567899999987643211000 0 0111111222212 25899999
Q ss_pred EcCccccc
Q 017284 354 AGHVHAYE 361 (374)
Q Consensus 354 sGH~H~ye 361 (374)
+||.|...
T Consensus 245 gGHtH~~~ 252 (527)
T 3qfk_A 245 TGHQHRQI 252 (527)
T ss_dssp CCSSCCEE
T ss_pred ECCCCccc
Confidence 99999853
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.8e-07 Score=90.82 Aligned_cols=176 Identities=14% Similarity=0.097 Sum_probs=90.2
Q ss_pred CCcEEEEEecCCCCCC-----------------cHH----HHHHHHHhCC-CeEEecccccccCCCCccccchhhHHHHH
Q 017284 160 APYTFGIIGDLGQTYN-----------------SLS----TLKHYMQSGG-QSVLFLGDLSYADRYEYNDVGIRWDSWGR 217 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~-----------------~~~----~l~~~~~~~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~ 217 (374)
..++|++++|+|.... ... .++++.+.++ +++|.+||++...... . ........+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~ 100 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF--T-VYKGAEVAH 100 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH--H-HHTTHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhh--h-hhCChHHHH
Confidence 5799999999996421 122 2344444466 5999999999532110 0 011122233
Q ss_pred HHHHhhhcCCeEEcCCCcccccCCCCCCccccc-ccccccccCcCCCC----C--------CCCceEEEecCC--EEEEE
Q 017284 218 FIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK-SYLHRIATPYTASK----S--------TNPLWYAIRRAS--AHIIV 282 (374)
Q Consensus 218 ~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~y~~~f~~p~~~~~----~--------~~~~~ysf~~g~--v~fi~ 282 (374)
.+..+ . +-+.++||||+++... .+. .+......|.-... . ....|.-++.++ +-||.
T Consensus 101 ~ln~l--g-~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG 172 (546)
T 4h2g_A 101 FMNAL--R-YDAMALGNHEFDNGVE-----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 172 (546)
T ss_dssp HHHHH--T-CSEEECCGGGGTTHHH-----HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEE
T ss_pred HHHhc--C-CcEEeccCcccccCHH-----HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEE
Confidence 33332 2 3367899999864210 011 11111111211100 0 123466677887 55666
Q ss_pred EeCCCC-----CC---CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEE
Q 017284 283 LSSYSP-----YV---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIF 353 (374)
Q Consensus 283 Ldt~~~-----~~---~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~Vdlvl 353 (374)
+.+... -. ......+.+++.+++.+..++..+|++.|.+... ... +..+ .+||++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~---la~~~~giDlIl 237 (546)
T 4h2g_A 173 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKL---IAQKVRGVDVVV 237 (546)
T ss_dssp EECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHH---HHHHSTTCCEEE
T ss_pred ecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHH---HHHhCCCCcEEE
Confidence 665320 00 0112234444444443224577899999977521 012 2222 3799999
Q ss_pred EcCccccc
Q 017284 354 AGHVHAYE 361 (374)
Q Consensus 354 sGH~H~ye 361 (374)
+||.|..-
T Consensus 238 gGHtH~~~ 245 (546)
T 4h2g_A 238 GGHSNTFL 245 (546)
T ss_dssp CCSSCCCC
T ss_pred eCCcCccc
Confidence 99999853
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-06 Score=87.37 Aligned_cols=186 Identities=13% Similarity=0.093 Sum_probs=90.6
Q ss_pred CCcEEEEEecCCCCCC---------------cHH----HHHHHHHhCCCeEEe-cccccccCCCCccccchhhHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYN---------------SLS----TLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~---------------~~~----~l~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
..++|++++|+|.... ... .++++.+.+++.+++ +||++..... .. ........+.+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~--~~-~~~g~~~~~~l 81 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI--SS-LTKGKAIIDIM 81 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--HH-TTTTHHHHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh--hh-hcCChHHHHHH
Confidence 4689999999995321 122 234444557887766 9999853211 00 01112222222
Q ss_pred HHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCC-------CCC-C-CCceEEEecCC--EEEEEEeCCC-
Q 017284 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-------SKS-T-NPLWYAIRRAS--AHIIVLSSYS- 287 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~-------~~~-~-~~~~ysf~~g~--v~fi~Ldt~~- 287 (374)
. .--+-+.++||||+++... .+..+......|.-. .+. . ...|.-++.++ +-||.+-+..
T Consensus 82 n---~lg~D~~tlGNHEfd~G~~-----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~ 153 (509)
T 3ive_A 82 N---TMPFDAVTIGNHEFDHGWD-----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFA 153 (509)
T ss_dssp T---TSCCSEECCCGGGGTTCHH-----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHH
T ss_pred H---hcCCcEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcc
Confidence 2 2234567899999864310 011111111111110 000 0 23456677787 5667774310
Q ss_pred ----CC-----C-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC----CCCHHHHHHHHHHHHH-cCCcEE
Q 017284 288 ----PY-----V-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY----MEGESMRAVFESWFVH-SRVDFI 352 (374)
Q Consensus 288 ----~~-----~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~----~~~~~~r~~l~~ll~~-~~Vdlv 352 (374)
.+ + ......+.+++.+++.+.. +..+|++.|.+.-....... ..+.... ..+.++ .+||++
T Consensus 154 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlI 229 (509)
T 3ive_A 154 FNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDIL 229 (509)
T ss_dssp HHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEE
T ss_pred cccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEE
Confidence 00 0 1123344555555554323 77899999987532211000 0011111 123333 379999
Q ss_pred EEcCcccc
Q 017284 353 FAGHVHAY 360 (374)
Q Consensus 353 lsGH~H~y 360 (374)
|+||.|..
T Consensus 230 lgGHtH~~ 237 (509)
T 3ive_A 230 ITGHAHVG 237 (509)
T ss_dssp EEESSCCC
T ss_pred EeCCcCcc
Confidence 99999974
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.7e-06 Score=87.10 Aligned_cols=144 Identities=14% Similarity=0.075 Sum_probs=72.8
Q ss_pred CC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC---
Q 017284 188 GQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--- 263 (374)
Q Consensus 188 ~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~--- 263 (374)
|| ++|.+||++..... .. ........+.++.+ ..+++ + ||||+.+.. ..+..+...+..|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~--~~-~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~-----~~l~~~l~~~~~p~L~aNv~ 190 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL--SL-LTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR-----ERVEELLGLFRGEFLSYNIV 190 (562)
T ss_dssp CCEEEEECSCCSSSSHH--HH-HHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-----HHHHHHHHHCCSEECCSSCE
T ss_pred CCEEEEeCCCCCCcchh--hh-hhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-----HHHHHHHHhCCCCEEEEEEE
Confidence 88 88999999953211 00 00112233444443 35665 7 999986431 11111111122221110
Q ss_pred ----C-CCCCceEEEecCC--EEEEEEeCCC-----------C--CCCChHHHHHHHHHHhhccCCCCCeEEEEecccce
Q 017284 264 ----K-STNPLWYAIRRAS--AHIIVLSSYS-----------P--YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLY 323 (374)
Q Consensus 264 ----~-~~~~~~ysf~~g~--v~fi~Ldt~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y 323 (374)
+ .....|.-++.++ +.||.+.+.. . +....+..+-..++|++ .+...+|++.|.|..
T Consensus 191 ~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~ 267 (562)
T 2wdc_A 191 DDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQ 267 (562)
T ss_dssp ETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHH
T ss_pred ecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCc
Confidence 0 0122455667777 5667765531 0 11112333322333443 457789999998853
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 324 SSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 324 ~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
.. ..+.++ .+||++|+||.|...
T Consensus 268 ~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 268 LD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred ch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 10 123333 489999999999854
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.7e-05 Score=69.96 Aligned_cols=174 Identities=15% Similarity=0.080 Sum_probs=91.2
Q ss_pred CcEEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcc
Q 017284 161 PYTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD 236 (374)
.+|++++||.+..... ...+.++.+. ++|+++..||.+.....- . ....+.+..+ .+- ..+.||||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~----~---~~~~~~ln~~--G~D-a~TlGNHe 73 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL----S---LKHYEFLKEA--GVN-YITMGNHT 73 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC----C---HHHHHHHHHH--TCC-EEECCTTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc----C---HHHHHHHHhc--CCC-EEEEccCc
Confidence 5899999999854211 1234455554 789999999998643211 1 2223333332 223 45789999
Q ss_pred cccCCCCCCccccc-c--cccccccCcCCCCC-CCCceEEEecCC--EEEEEEeCCCCCC--CChHHHHHHHHHHhhccC
Q 017284 237 IEFMPNMGEVIPFK-S--YLHRIATPYTASKS-TNPLWYAIRRAS--AHIIVLSSYSPYV--KYTPQWWWLREELKKVDR 308 (374)
Q Consensus 237 ~~~~~~~~~~~~~~-~--y~~~f~~p~~~~~~-~~~~~ysf~~g~--v~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~~ 308 (374)
+++.+ +..+|- . ...--+.|...... ....|.-++.++ +-+|.|-+...+. ....-.+-+++.++ +
T Consensus 74 fD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~ 147 (281)
T 1t71_A 74 WFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---K 147 (281)
T ss_dssp TCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---T
T ss_pred ccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---h
Confidence 97541 110100 0 00001112211000 223566778877 5566665543232 12222444555555 2
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
.+++.+||.+|.-. ....+.+.. ...-+||+|+.||+|...-
T Consensus 148 ~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 148 RDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp CCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred cCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 57889999999421 111122222 2234699999999999654
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.22 E-value=4.9e-07 Score=79.83 Aligned_cols=66 Identities=21% Similarity=0.223 Sum_probs=40.9
Q ss_pred CcEEEEEecCCCCCCcH-HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNSL-STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~-~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
..+++++||+|...... ..++.+... ++|.++++||++..... . . +.++.+ ...+++.+.||||..
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~-----~---~---~~~~~l-~~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAE-----N---V---ECLELI-TFPWFRAVRGNHEQM 79 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSC-----H---H---HHHGGG-GSTTEEECCCHHHHH
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCC-----h---H---HHHHHH-hcCCEEEEccCcHHH
Confidence 46899999999643221 122222222 68999999999953221 1 1 222222 235899999999974
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=3.4e-05 Score=72.60 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=28.1
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
.++.-+|+++|...-........++. ...|..-+ -+||++|+||.|..
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~~~lA~~v--~giD~IigGHsH~~ 253 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--VFDLATKT--KGIDAIISGHQHGL 253 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--HHHHHHHC--SCCCEEEECSSCCE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHHHHhcC--CCCcEEEECCCCcc
Confidence 46888999999876432111111111 11222111 47999999999985
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.97 E-value=7.3e-05 Score=74.95 Aligned_cols=193 Identities=14% Similarity=0.139 Sum_probs=91.3
Q ss_pred EECCCCCC-CCCCcEEEEEecCCCCCC-------------cHHHH-HHHHH----hCCC-eEEecccccccCCCCccccc
Q 017284 150 FQTPPKIH-PDAPYTFGIIGDLGQTYN-------------SLSTL-KHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVG 209 (374)
Q Consensus 150 F~T~p~~~-~~~~~~f~v~gD~~~~~~-------------~~~~l-~~~~~----~~~d-~vl~~GD~~y~~~~~~~~~~ 209 (374)
+-++|... ....++|++++|+|.... ....+ ..+.+ .+++ ++|.+||++......... .
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~-~ 81 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-S 81 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-S
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhc-c
Confidence 33444432 235899999999997521 02222 22222 3677 578999999532110000 0
Q ss_pred hhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC--------CC---CCCceEEEec--C
Q 017284 210 IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--------KS---TNPLWYAIRR--A 276 (374)
Q Consensus 210 ~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~--------~~---~~~~~ysf~~--g 276 (374)
.......+.+..+ . .=+.++||||+++... ....+.........|.-.. +. ....|.-++. +
T Consensus 82 ~~g~~~~~~ln~l--g-~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~ 156 (557)
T 3c9f_A 82 PNGLKSTPIFIKQ--D-YDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIR 156 (557)
T ss_dssp STTTTTHHHHTTS--C-CSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTT
T ss_pred cCCHHHHHHHHhc--C-CCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccC
Confidence 0112222333322 2 3356899999964310 0001111111122222111 00 1123556777 6
Q ss_pred C--EEEEEEeCCCCCC-----C-ChHH---HHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHH
Q 017284 277 S--AHIIVLSSYSPYV-----K-YTPQ---WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFV 345 (374)
Q Consensus 277 ~--v~fi~Ldt~~~~~-----~-~~~Q---~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~ 345 (374)
+ +-||.+.+...-. . ...+ .+|+++.++ .++..+|+++|.+.-... .+ . ......+.
T Consensus 157 G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA 224 (557)
T 3c9f_A 157 GIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLR 224 (557)
T ss_dssp CCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHH
T ss_pred CEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHH
Confidence 6 5566665432100 0 1112 246665442 467889999998762000 11 1 12223333
Q ss_pred H--cCCcE-EEEcCcccc
Q 017284 346 H--SRVDF-IFAGHVHAY 360 (374)
Q Consensus 346 ~--~~Vdl-vlsGH~H~y 360 (374)
+ .++|+ +|+||.|..
T Consensus 225 ~~~~giDilIlgGHtH~~ 242 (557)
T 3c9f_A 225 QFFPDTIIQYFGGHSHIR 242 (557)
T ss_dssp HHCTTSEEEEEECSSCCE
T ss_pred HhCCCCCEEEECCCCCCC
Confidence 3 58995 999999986
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.5e-05 Score=69.61 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=46.1
Q ss_pred CcEEEEEecCCCCCCcH-HHHHHHHHhCCCeEEecccccccCCCCccccchhh--HHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 161 PYTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRW--DSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~-~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w--~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
-+|++++||+|...... ..++.+.+.++|+|+++||++...... +....| .+..+.++.+. .|++.++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~--~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN--ALPEGYAPAKVVERLNEVA--HKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTS--CCCTTBCHHHHHHHHHTTG--GGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCccc--ccccccCHHHHHHHHHhcC--CceEEEECCCch
Confidence 37999999999753222 233344445899999999999642211 001111 33344444332 589999999997
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 101 ~ 101 (208)
T 1su1_A 101 E 101 (208)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00044 Score=61.76 Aligned_cols=168 Identities=14% Similarity=0.157 Sum_probs=85.9
Q ss_pred cEEEEEecCCCCCCc---HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS---LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||.=..... ...+.++.+.. |++|..|..+.....- . ....+.+..+ .+-.+ +.||||++
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~----~---~~~~~~l~~~--G~D~~-T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGL----D---RRSYRLLREA--GVDLV-SLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSC----C---HHHHHHHHHH--TCCEE-ECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCc----C---HHHHHHHHhC--CCCEE-EeccEeeE
Confidence 489999998432211 22344444446 9988877776533211 1 2222333322 34444 78999996
Q ss_pred cCCCCCCcccccccccc--cccCcCCC-CCCCCceEEEecCCEEE--EEEeCCCCCCCChHHHHHHHHHHhhccCCCCCe
Q 017284 239 FMPNMGEVIPFKSYLHR--IATPYTAS-KSTNPLWYAIRRASAHI--IVLSSYSPYVKYTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~--f~~p~~~~-~~~~~~~ysf~~g~v~f--i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
.. +. ..|... .-.|.+-+ +.....|.-++.++.++ |.|-+.........-.+-+++.+++. + ++.
T Consensus 70 ~~----~l---~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~l--k-~d~ 139 (252)
T 2z06_A 70 HK----EV---YALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEE--K-ADY 139 (252)
T ss_dssp CT----TH---HHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHC--C-CSE
T ss_pred Cc----hH---HHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHh--C-CCE
Confidence 42 11 111111 11222211 11234677788887554 44444321112222233456666664 2 778
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
+||.+|.-. ....+.+. ....-+||+|+.||+|...-
T Consensus 140 IIv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 140 VLVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 999999421 11111222 22335699999999999543
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00019 Score=71.65 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=85.5
Q ss_pred CcEEEEEecCCCCCC-----------------cHH----HHHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHH
Q 017284 161 PYTFGIIGDLGQTYN-----------------SLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRF 218 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~-----------------~~~----~l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~ 218 (374)
.++|++.+|.|.... ... .++++.+.+++ ++|.+||++..... .. ........+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~--~~-~~~g~~~i~~ 79 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW--FT-VYKGAEVAHF 79 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--HH-HHTTHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--HH-HhCChHHHHH
Confidence 478999999985310 122 23444444665 67789999953211 00 0111112222
Q ss_pred HHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC------------CCCCCceEEEecCC--EEEEEEe
Q 017284 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS------------KSTNPLWYAIRRAS--AHIIVLS 284 (374)
Q Consensus 219 ~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~------------~~~~~~~ysf~~g~--v~fi~Ld 284 (374)
+..+. .=..++||||+++.... -...+......|.-.. ...-..|.-++.++ +-||.+-
T Consensus 80 mN~lg---yDa~~lGNHEFd~G~~~----l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGlt 152 (530)
T 4h1s_A 80 MNALR---YDAMALGNHEFDNGVEG----LIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 152 (530)
T ss_dssp HHHTT---CCEEECCGGGGTTTTHH----HHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEE
T ss_pred HhccC---CCEEEEchhhhccCHHH----HHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecccc
Confidence 32221 23568999999764210 0011111111121110 01112466677887 5567776
Q ss_pred CCC------CC-----CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 017284 285 SYS------PY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFI 352 (374)
Q Consensus 285 t~~------~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdlv 352 (374)
+.. .. ...-+..+...++|++ .++.-+|++.|...- ... .+.++. +||++
T Consensus 153 t~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~I 214 (530)
T 4h1s_A 153 SKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVV 214 (530)
T ss_dssp CTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEE
T ss_pred ccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCee
Confidence 532 10 1112223334445554 467789999995421 111 223333 79999
Q ss_pred EEcCcccc
Q 017284 353 FAGHVHAY 360 (374)
Q Consensus 353 lsGH~H~y 360 (374)
+.||.|..
T Consensus 215 lgGHsH~~ 222 (530)
T 4h1s_A 215 VGGHSNTF 222 (530)
T ss_dssp ECCSSCCC
T ss_pred ccCCccce
Confidence 99999974
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00058 Score=61.21 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=86.7
Q ss_pred cEEEEEecCCCCCCcHHH----HHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSLST----LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~----l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=... .... +.++.+.. |++|..|+.+.....- . ....+.+..+ .+- ..+.||||+
T Consensus 1 m~ilf~GDv~g~~-G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~----~---~~~~~~l~~~--G~D-a~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVFGQP-GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGM----H---RDAARGALEA--GAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHH-HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSC----C---HHHHHHHHHH--TCS-EEECCTTTT
T ss_pred CEEEEEeccCChH-HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCC----C---HHHHHHHHhC--CCC-EEEeccccc
Confidence 4899999984221 1222 33444446 9999988887643211 1 1222333322 233 347799999
Q ss_pred ccCCCCCCccccccccc-ccccCcCCC--CCCCCceEEEecCC--EEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 017284 238 EFMPNMGEVIPFKSYLH-RIATPYTAS--KSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~-~f~~p~~~~--~~~~~~~ysf~~g~--v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
+.. +...+-.-.. +.-.|.+-+ +.....|.-++.++ +-+|.|-+.........-.+-+++.+++. +++
T Consensus 69 D~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d 141 (255)
T 1t70_A 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCC
T ss_pred cCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCC
Confidence 742 1111100001 111122211 11234566788877 55666655421112222334466666654 577
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
.+||.+|.-. ....+.+.. ...-+||+|+.||+|...-
T Consensus 142 ~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 142 TVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp EEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred EEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 8999999411 111122222 2234699999999998544
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0005 Score=64.46 Aligned_cols=46 Identities=24% Similarity=0.317 Sum_probs=27.2
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
.++.-+|++.|...-........++. .. ++.+ -++|++|.||.|..
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~--~~----~~~~v~gID~IlgGHsH~~ 246 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENS--VY----YLSQVPGVDAIMFGHAHAV 246 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCC--HH----HHTTSTTCCEEEECSSCSE
T ss_pred cCCCEEEEEeccCccccccccccchh--HH----HHhhCCCCCEEEeCCCccc
Confidence 46888999999876221110001111 11 1122 47999999999985
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00036 Score=53.90 Aligned_cols=92 Identities=26% Similarity=0.351 Sum_probs=58.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.......+++.|+|..+.... .-.|+|....+.....- ..... ..-...++|++|+|+|.
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 81 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDW--IMETI------SGDRLTHQIMDLNLDTM 81 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTS--EEEEE------ETTCCEEEECSCCSSCE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccce--EEEEE------CCCceEEEEcCCCCCCE
Confidence 57888888866434689999999875332 23567766443211000 00010 11234578999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCCCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPKIHP 158 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~~~~ 158 (374)
|.+||.. +.+|....|+|++.+.+
T Consensus 82 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 82 YYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 9999843 35788889999876544
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0005 Score=54.40 Aligned_cols=83 Identities=16% Similarity=0.044 Sum_probs=55.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC--------CceEEEeecCCCC--CceEEeEEEEEEeecccccEEEEEEeC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKY--DSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~--------~~~V~y~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~v~l~ 127 (374)
+..|..|++..-. .+++.|+|....... .-.|+|....... ...+.. ....++|+
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~ 83 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTAT 83 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEE
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEec
Confidence 3678888887543 489999999654222 3467787753211 111111 12357899
Q ss_pred CCCCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 128 DLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 128 gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
||+|+|.|.++|.. +.+|....|+|.+.
T Consensus 84 gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 84 GLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 99999999999843 35788889999875
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00055 Score=52.41 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.......+++.|+|..+..... -.|+|....+..+..... . ...++|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------~---~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA----------A---SNFTEIKNLLVNTL 75 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE----------S---SSEEEECSCCSSCE
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC----------C---ccEEEeCCCCCCCE
Confidence 478888776533235789999998753322 356676655433322211 1 12578999999999
Q ss_pred EEEEeCC------CCCCceEEEECCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.+||.. +.+|....++|.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCC
Confidence 9999853 2467788889854
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00044 Score=52.96 Aligned_cols=82 Identities=21% Similarity=0.317 Sum_probs=50.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.++... .+++.|+|..+...+ .-.|+|....+.......+ ....++|+||+|+|.
T Consensus 9 ~~P~~~~~~~~s--~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~ 73 (106)
T 1x4x_A 9 DQCKPPQVTCRS--ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATT 73 (106)
T ss_dssp CCCCCCCCEEEE--TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCE
T ss_pred CCCCCCEEEEcC--CCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCE
Confidence 345555555332 478999998775322 2356666544221111111 112467899999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....++|++.
T Consensus 74 Y~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 74 YYCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 9999853 34678889999865
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00084 Score=51.23 Aligned_cols=86 Identities=15% Similarity=0.223 Sum_probs=53.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|..+.+.... .+ +.|+|..+...+ .-.|+|.......+.... ... . ...-...++|+||+|+|
T Consensus 8 ~~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~---~~~---~-~~~~~~~~~i~~L~p~t 77 (105)
T 2haz_A 8 SSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDA---K-EASMEGIVTIVGLKPET 77 (105)
T ss_dssp CCCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE---EEH---H-HHHHHSEEEECSCCTTC
T ss_pred cCCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccce---EEc---c-ccCCccEEEECCCCCCC
Confidence 347777766544 34 999999874332 235777776543221110 000 0 01122356899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
.|.+||.. +..|....|+|.|
T Consensus 78 ~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 78 TYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 99999843 4567888999987
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.001 Score=51.77 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=55.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC-CCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN-ELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~-~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+.... .+++.|.|..+. ... .-.|+|....+..+... .. ...-...++|++|+|+|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 19 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE-------NT---SHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE-------EC---SSTTCSEEEECSCCTTC
T ss_pred CCCCCcEEEecC--CCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEE-------Ee---ccCCccEEEeCCCCCCC
Confidence 578888877554 478999999875 222 23577776643222111 00 01123457899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
.|.+||.. +.+|....|+|.+..
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 99999853 235777889997643
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0016 Score=50.33 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=54.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--C----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.... .+++.|+|..+.. . ..-.|+|............- .... . -...++|++|+|+
T Consensus 10 ~~P~~~~~~~~~--~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~--~~~~----~--~~~~~~i~~L~p~ 79 (114)
T 1x4y_A 10 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKK--DMVE----G--DRYWHSISHLQPE 79 (114)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCC--EEEE----T--TCCEEEECSCCTT
T ss_pred CCCeEEEEEecC--CCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceee--EecC----C--cEeEEEcCCCCCC
Confidence 467777766443 5899999998741 1 12357776554321000000 0000 0 1134789999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPKIH 157 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~~~ 157 (374)
|.|.+||.. +.+|....++|.+.+.
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 80 TSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 999999843 3577888999987654
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0011 Score=51.02 Aligned_cols=83 Identities=17% Similarity=0.338 Sum_probs=51.1
Q ss_pred CCCceEEEEeeCCCCCceEEEE--EcCCCCCC---ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISW--VTPNELGS---NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W--~t~~~~~~---~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+++.... .+++.|+| ..+..... -.|+|....+ . ..+... .. . ++|+||+|+|
T Consensus 11 ~~p~~l~~~~~~--~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~----~-----~~~~~~--~~-~---~~i~~L~p~t 73 (107)
T 1x5a_A 11 LSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDE----E-----WHQMVL--EP-R---VLLTKLQPDT 73 (107)
T ss_dssp CCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSC----E-----EEEEES--SS-E---EEEESCCSSC
T ss_pred CCCCceEEEecC--CCEEEEEECCCCCCCCCCceEEEEEEEeCCC----C-----ceEEEe--cc-e---EEECCCCCCC
Confidence 345566665443 47899999 66543222 2455554311 0 111110 11 1 8999999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCCCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPKIHP 158 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~~~~ 158 (374)
.|.+||.. +.+|....|+|.+..++
T Consensus 74 ~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 74 TYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 99999843 45788889999887654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00076 Score=51.70 Aligned_cols=87 Identities=17% Similarity=0.302 Sum_probs=54.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+... ..+++.|.|..+.... .-.|+|............ .. .-...++|++|+|+|.
T Consensus 12 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~ 78 (111)
T 1x5l_A 12 SQVVVIRQERA--GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----LK------AVTTRATVSGLKPGTR 78 (111)
T ss_dssp CCCCCEECSCB--CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----EE------ESSSEEEECSCCTTCE
T ss_pred CCCceEEEEEc--CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----ec------CCCCEEEEcCCCCCCE
Confidence 45666665543 3578999998764332 235677765422111110 00 0123568999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCCCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPKIHP 158 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~~~~ 158 (374)
|.+||.. +.+|....|+|++.+++
T Consensus 79 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 79 YVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 9999853 35788899999886544
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00066 Score=52.82 Aligned_cols=84 Identities=14% Similarity=0.048 Sum_probs=53.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC--------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~--------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
..|..|++..-. .+++.|+|....... .-.|+|.......... .+ ...-...++|+||+
T Consensus 10 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~------~~-----~~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY------KN-----ANATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC------EE-----CCBCSSEEEEESCC
T ss_pred CCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE------EE-----EecCcCEEEeCCCC
Confidence 578888887554 589999999764221 2356676632111100 00 00122357899999
Q ss_pred CCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 131 YDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|+|.|.++|.. +.+|....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999843 35778888898765
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00024 Score=53.71 Aligned_cols=81 Identities=21% Similarity=0.255 Sum_probs=49.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC--CCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN--ELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~--~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.... .+++.|+|..+. ... .-.|+|....+.......+ -...+.|+||+|+
T Consensus 10 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~ 74 (103)
T 2edy_A 10 GFPQNLHVTGLT--TSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPD 74 (103)
T ss_dssp CCCEEEECSSBC--SSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTT
T ss_pred CCCeeeEEEecC--CCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCC
Confidence 467666665433 578999999872 121 2356676655422111110 1223579999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.|.+||.. +.+|....|+|.|
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 75 TTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 999999853 2466667777765
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00094 Score=51.00 Aligned_cols=85 Identities=16% Similarity=0.251 Sum_probs=53.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|+|..+..... -.|+|....+.......- . .-...++|+||+|+|.
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----~------~~~~~~~l~~L~p~t~ 75 (108)
T 2djs_A 9 STVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMA-----R------SQTNTARIDGLRPGMV 75 (108)
T ss_dssp CCCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEE-----E------ESSSEEEEESCCTTCE
T ss_pred CCCcceEEEecC--CCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEE-----e------cCccEEEEcCCCCCCE
Confidence 356667665443 4789999998754332 245666554322211100 0 0123467999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
|.+||.. +.+|....|+|++..
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 76 YVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 9999853 246778889998754
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=50.14 Aligned_cols=85 Identities=20% Similarity=0.302 Sum_probs=54.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|.|........ -.|+|............ . ...-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 19 SAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp CCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSE
T ss_pred cCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCE
Confidence 568888877543 4789999987653322 24566655432221110 0 011234578999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....++|.+.
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999843 35677888999764
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=50.85 Aligned_cols=82 Identities=15% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+++.... .+++.|+|....... .-.|+|............. ....++|+||+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~ 83 (116)
T 1x5g_A 19 GPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTE 83 (116)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCE
T ss_pred cCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCE
Confidence 467777776543 478999999764222 2357777665433222111 123568999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....|+|.+.
T Consensus 84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 84 YSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 9999843 34677778998764
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.002 Score=48.71 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=52.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|..+.+.... .+++.|.|..... ...-.|+|...... .+..+.. .....++|++|+|+|.|
T Consensus 9 ~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y 74 (106)
T 2dju_A 9 KPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEY 74 (106)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEE
T ss_pred cCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEE
Confidence 467778776543 4789999997631 12345777665532 1211111 01223578999999999
Q ss_pred EEEeCC------CCCCceEEEECCCC
Q 017284 136 YYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 136 ~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.+||.. +.+|....++|.+.
T Consensus 75 ~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 75 AFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEeCCccCCCcccEEeEcCCC
Confidence 999853 24677788888764
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0003 Score=63.53 Aligned_cols=63 Identities=19% Similarity=0.262 Sum_probs=40.0
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
..+++++||+|... ..+.++.+. ++ |.+|++||++..... . .+..+.+.. .+++.+.|||
T Consensus 18 ~~~i~visDiHg~~---~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~-----~---~~~l~~l~~----~~~~~v~GNH 82 (262)
T 2qjc_A 18 TGRVIIVGDIHGCR---AQLEDLLRAVSFKQGSDTLVAVGDLVNKGPD-----S---FGVVRLLKR----LGAYSVLGNH 82 (262)
T ss_dssp CSCEEEECCCTTCH---HHHHHHHHHHTCCTTTSEEEECSCCSSSSSC-----H---HHHHHHHHH----HTCEECCCHH
T ss_pred CCeEEEEeCCCCCH---HHHHHHHHHHhccCCCCEEEEecCCCCCCCC-----H---HHHHHHHHH----CCCEEEeCcC
Confidence 34899999999542 334433332 44 999999999953221 1 122222322 4899999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 83 d~~ 85 (262)
T 2qjc_A 83 DAK 85 (262)
T ss_dssp HHH
T ss_pred hHH
Confidence 974
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0015 Score=50.08 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=53.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCC-CC-ceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKK-YD-SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~-~~-~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+..-. .+++.|+|..+.... .-.|+|....+. .. .... . ... ..++|+||+|+
T Consensus 9 ~~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---~-------~~~--~~~~i~~L~p~ 74 (109)
T 2e7h_A 9 PAVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL---K-------TSE--NRAELRGLKRG 74 (109)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE---E-------ESS--SEEEEESCCTT
T ss_pred CCCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE---c-------cCC--CEEEECCCCCC
Confidence 346667776443 478999998874332 235777665421 11 1111 0 011 15789999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPKIH 157 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~~~ 157 (374)
|.|.+||.. +.+|....|+|.+...
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 75 ASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp SCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred CeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 999999843 3578888999987543
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0025 Score=49.49 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=53.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
..|..+.+.... .+++.|+|..... ...-.|+|....+...... .... .+....++|+||+|+|.|.
T Consensus 20 ~~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 2ee2_A 20 EAPTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN---RVQV------TSQEYSARLENLLPDTQYF 88 (119)
T ss_dssp CCCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE---EEEE------ETTCSEEEECSCCTTCEEE
T ss_pred CCCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCcE---EEEc------CCCEeEEEECCCCCCCEEE
Confidence 356677776443 4789999998753 2233577766543211100 0000 0112357899999999999
Q ss_pred EEeCC------CCCCceEEEECCCCC
Q 017284 137 YKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 137 Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
+||.. +.+|....|+|.+.+
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 89 IEVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp EEEEEECSSSCCCCCCCEEEECCCCC
T ss_pred EEEEEEcCCccCCCCCCEEEECCCCC
Confidence 99843 356778889997654
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=49.06 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=51.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC-C----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE-L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~-~----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+... ...+++.|.|..+.. . ..-.|+|....+..+..+. . .....+++++|+|+|
T Consensus 10 ~~P~~~~~~~~-~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t 76 (110)
T 2crz_A 10 GPCLPPRLQGR-PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGK 76 (110)
T ss_dssp CCCCCCEECSC-CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTC
T ss_pred CCCCCceeccc-cCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCC
Confidence 45666666322 124789999976522 1 1235777665443332221 0 012346789999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
.|.+||.. +.+|....++|.+.+
T Consensus 77 ~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 77 TYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 99999843 356778888887643
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0023 Score=48.57 Aligned_cols=82 Identities=13% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|+|....... .-.|+|............. . ...++|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------~---~~~~~i~~L~p~t~ 73 (106)
T 2ed8_A 9 GPVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV----------D---GLSYKLEGLKKFTE 73 (106)
T ss_dssp CCCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE----------C---SSCEEEESCCTTCE
T ss_pred cCCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC----------C---ccEEEECCCCCCCE
Confidence 468778776543 478999999774221 2356776655432211110 0 13467999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....++|.+.
T Consensus 74 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 74 YSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 9999853 23567788888654
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00083 Score=51.84 Aligned_cols=72 Identities=17% Similarity=0.247 Sum_probs=45.4
Q ss_pred CCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------C
Q 017284 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------G 142 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------~ 142 (374)
.+++.|.|......+ .-.|+|....+..+..+. . +....++|+||+|+|.|.+||.. +
T Consensus 24 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 91 (110)
T 2db8_A 24 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY------V------GKETMCTVDGLHFNSTYNARVKAFNKTGVS 91 (110)
T ss_dssp SSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE------E------ESCSCEEEECCCSSSCCEEEEEEECSSCBC
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE------e------CCcCEEEECCCCCCCEEEEEEEEEeCCcCC
Confidence 478888888764322 235777665432222111 0 01123578899999999999843 3
Q ss_pred CCCceEEEECCCCC
Q 017284 143 DSSREFWFQTPPKI 156 (374)
Q Consensus 143 ~~s~~~~F~T~p~~ 156 (374)
.+|....++|.+.+
T Consensus 92 ~~S~~~~~~T~~~p 105 (110)
T 2db8_A 92 PYSKTLVLQTSEGS 105 (110)
T ss_dssp CCCSCEECCCCCCC
T ss_pred CCCCCEEEEcCCCC
Confidence 56788889998764
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00038 Score=63.56 Aligned_cols=64 Identities=20% Similarity=0.310 Sum_probs=40.1
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD 236 (374)
++++++||+|... ..+.++.+. ++|.++++||++..... . .+..+.+..+. .+++.+.||||
T Consensus 1 M~i~vigDiHG~~---~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~-----s---~~~l~~l~~l~--~~~~~v~GNHe 67 (280)
T 2dfj_A 1 MATYLIGDVHGCY---DELIALLHKVEFTPGKDTLWLTGDLVARGPG-----S---LDVLRYVKSLG--DSVRLVLGNHD 67 (280)
T ss_dssp -CEEEECCCCSCH---HHHHHHHHHTTCCTTTCEEEECSCCSSSSSC-----H---HHHHHHHHHTG--GGEEECCCHHH
T ss_pred CeEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCcCCCCCc-----c---HHHHHHHHhCC--CceEEEECCCc
Confidence 3689999999753 333333332 57899999999953221 1 22333333331 27999999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 68 ~~ 69 (280)
T 2dfj_A 68 LH 69 (280)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0057 Score=47.64 Aligned_cols=81 Identities=19% Similarity=0.372 Sum_probs=52.6
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC--CC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE--LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~--~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.|..+.+.... .+++.|.|..+.. .. .-.|+|....+...... . ......+.|++|+|+|
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 57777776543 4789999998753 12 23577776654322111 0 1123356899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
.|.+||.. +.+|....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999843 3567888898864
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0032 Score=47.89 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=51.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
..|..+++..-. .+++.|+|.-+.....-.|+|.......+.... . ... .. . .++|+||+|+|.|.++
T Consensus 10 ~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~-~-~~~-----~~-~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 10 PPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEER-E-VQV-----GR-P--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE-E-EEE-----SS-S--EEEEESCCTTCCEEEE
T ss_pred CCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE-E-Eec-----CC-C--EEEECCCCCCCEEEEE
Confidence 467778777544 489999997765433345777765432211100 0 000 11 1 6899999999999999
Q ss_pred eCC--C-CC--CceEEEECCCCC
Q 017284 139 IGD--G-DS--SREFWFQTPPKI 156 (374)
Q Consensus 139 v~~--~-~~--s~~~~F~T~p~~ 156 (374)
|.. + +. .....++|.|..
T Consensus 78 V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 78 VQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EEEECSSSBCCCEEEECCCCCCS
T ss_pred EEEECCCCCCCCEEEEEEcCCCC
Confidence 853 1 22 234567777654
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0023 Score=49.19 Aligned_cols=83 Identities=16% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
..|..+.+.... .+++.|+|...... ..-.|+|............ . .. ...++|+||+|+|.|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~--~~~~~i~~L~p~t~Y~ 84 (115)
T 1x5z_A 19 GQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I------EP--GTSYRLQGLKPNSLYY 84 (115)
T ss_dssp CCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E------CS--SSEEEEECCCTTCEEE
T ss_pred CCCccCEeeeCC--CCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----c------CC--CcEEEECCCCCCCeEE
Confidence 467777776443 58999999987432 1234566554432221100 0 01 1356899999999999
Q ss_pred EEeCC------CCCCceEEEECCCC
Q 017284 137 YKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 137 Y~v~~------~~~s~~~~F~T~p~ 155 (374)
+||.. +.+|....|+|.+.
T Consensus 85 ~~V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 85 FRLAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp ECEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEECCCcccCCCcCEEEecCCC
Confidence 99853 24577788999765
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0053 Score=47.50 Aligned_cols=83 Identities=16% Similarity=0.286 Sum_probs=50.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+.... .+++.|.|......+.. .|+|...... .+... +. .. ...+++++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~~----~~--~~~~~v~~L~p~t 84 (118)
T 1x3d_A 19 DIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQC------YM----GS--QKQFKITKLSPAM 84 (118)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEE------EE----ES--CSEEEEESCCTTC
T ss_pred cCCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEe------ec----cC--CcEEEeCCCCCCC
Confidence 456666665443 47899999987544333 3455544331 12111 10 01 1345889999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.|.|||.. +.+|....++|.+.
T Consensus 85 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 85 GCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 99999853 34677778888764
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00099 Score=61.53 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=41.2
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCC
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGN 234 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GN 234 (374)
..++.++||+|.... .+.++.+. ..+.++++||++..+.. . .+....+..+.... .++.+.||
T Consensus 49 ~~~i~viGDIHG~~~---~L~~ll~~~~~~~~~~~vflGD~VDRG~~-----s---~evl~lL~~lk~~~p~~v~~lrGN 117 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFH---DLMELFRIGGKSPDTNYLFMGDYVDRGYY-----S---VETVTLLVALKVRYRERITILRGN 117 (309)
T ss_dssp CSSEEEECCCTTCHH---HHHHHHHHHCCTTTSCEEECSCCSSSSTT-----H---HHHHHHHHHHHHHCTTTEEECCCT
T ss_pred cCCEEEEecCCCCHH---HHHHHHHHcCCCCCCEEEEeCCccCCCCC-----h---HHHHHHHHHHHhhCCCcEEEEeCC
Confidence 357999999997532 33333332 56788999999964321 1 22233343333223 48999999
Q ss_pred cccc
Q 017284 235 HEIE 238 (374)
Q Consensus 235 HD~~ 238 (374)
||..
T Consensus 118 HE~~ 121 (309)
T 2ie4_C 118 HESR 121 (309)
T ss_dssp TSST
T ss_pred CCHH
Confidence 9974
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.013 Score=56.77 Aligned_cols=141 Identities=11% Similarity=0.020 Sum_probs=77.0
Q ss_pred CCcEEEEEecCCCCCCcHH---HHH----HHH-----------HhCCCeEEecccccccCCCCcc--------------c
Q 017284 160 APYTFGIIGDLGQTYNSLS---TLK----HYM-----------QSGGQSVLFLGDLSYADRYEYN--------------D 207 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~~---~l~----~~~-----------~~~~d~vl~~GD~~y~~~~~~~--------------~ 207 (374)
.+..++.+||++.+..... .++ .+. ..+...+|++||.+...+.... +
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 4678999999999876321 121 121 1167899999999965322100 0
Q ss_pred cchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcC--CCCCCCCceEEEecCCEEEEEEeC
Q 017284 208 VGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT--ASKSTNPLWYAIRRASAHIIVLSS 285 (374)
Q Consensus 208 ~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~--~~~~~~~~~ysf~~g~v~fi~Ldt 285 (374)
.....+.+.+++..+...+|+...|||||-... ....+ ++. ...|..... ......|- |.|++++++|++...
T Consensus 279 ~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lPQq-plh--~~lfp~s~~~~~~~~vtNP-~~~~i~G~~~LgtsG 353 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLPQQ-PLH--PCMFPLATAYSTLQLVTNP-YQATIDGVRFLGTSG 353 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSSCC-CCC--TTSCHHHHTSTTEEECCSS-EEEEETTEEEEECSS
T ss_pred hHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCCCC-CcC--HHHhhhhhhcCccEEeCCC-eEEEECCEEEEEECC
Confidence 012334556667777889999999999997421 11111 110 001110000 00001122 568999999988754
Q ss_pred CC-----CCCCChHHHHHHHHHHhh
Q 017284 286 YS-----PYVKYTPQWWWLREELKK 305 (374)
Q Consensus 286 ~~-----~~~~~~~Q~~WL~~~L~~ 305 (374)
.. .|...+.-++.+++.|+.
T Consensus 354 qnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 354 QNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 21 112233456788888876
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0027 Score=50.11 Aligned_cols=86 Identities=12% Similarity=0.235 Sum_probs=53.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|+|..+.... .-.|+|........... ... .......++|++|+|+|.
T Consensus 29 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~------~~~~~~~~~i~~L~p~t~ 97 (130)
T 1wfo_A 29 GPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT---VEV------LAPSARQYTATGLKPESV 97 (130)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC---EEE------ECTTCCEEEEESCCSSSE
T ss_pred CCCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEE---EEE------eCCCceEEEEcCCCCCCE
Confidence 467778777654 478999998774332 23567766543211100 000 011234578899999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....|+|.+.
T Consensus 98 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 98 YLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 9999853 23566778888764
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0047 Score=48.85 Aligned_cols=83 Identities=18% Similarity=0.356 Sum_probs=50.6
Q ss_pred CCCc-eEEEEeeCCCCCceEEEEEcCCCCC-Cc-eEEEeecCC-----------CCCceEEeEEEEEEeecccccEEEEE
Q 017284 59 NAPQ-QVRITQGDYDGKAVIISWVTPNELG-SN-RVQYGKLEK-----------KYDSSAEGTVTNYTFYKYKSGYIHHC 124 (374)
Q Consensus 59 ~~p~-~v~lt~~~d~~~~~~v~W~t~~~~~-~~-~V~y~~~~~-----------~~~~~~~g~~~~~~~~~~~~~~~~~v 124 (374)
.+|. .+.++.-. .++++|+|..+...+ .. .|+|....+ ..+..+.. . .....
T Consensus 17 ~~P~~~~~~~~~~--~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-----~-------~~~~~ 82 (127)
T 2dmk_A 17 NPPSIREELCTAS--HDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN-----I-------KQNHY 82 (127)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-----E-------CSSEE
T ss_pred cCCCCCCEEEeee--CCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec-----c-------cCCeE
Confidence 5677 66666443 479999999886432 22 677875211 11211110 0 01135
Q ss_pred EeCCCCCCCEEEEEeCC----C-CCCceEEEECCCC
Q 017284 125 LVDDLEYDTKYYYKIGD----G-DSSREFWFQTPPK 155 (374)
Q Consensus 125 ~l~gL~p~t~Y~Y~v~~----~-~~s~~~~F~T~p~ 155 (374)
+++||+|+|.|.|||.. | ..|....++|++.
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 78899999999999853 1 3456778888764
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0046 Score=47.12 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=44.8
Q ss_pred CCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCCC-----
Q 017284 73 GKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDG----- 142 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~----- 142 (374)
.+++.|.|......+ .-.|+|....+....... +. . ....+++++|+|+|.|.+||..-
T Consensus 21 ~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~----~--~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 89 (109)
T 1x5x_A 21 ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPK-----YD----G--EDLAYTVKNLRRSTKYKFKVIAYNSEGK 89 (109)
T ss_dssp SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEE-----EE----E--SCSEEEEESCCSSCEEEEEEEEECSSCE
T ss_pred CCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEe-----Ee----C--CccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence 479999998764322 235677665432111111 10 0 12246789999999999998541
Q ss_pred -CCCceEEEECCCC
Q 017284 143 -DSSREFWFQTPPK 155 (374)
Q Consensus 143 -~~s~~~~F~T~p~ 155 (374)
..|....++|.+.
T Consensus 90 s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 90 SNPSEVVEFTTCPD 103 (109)
T ss_dssp EEECCCEEEECCCC
T ss_pred cCCccCEEeEeCCC
Confidence 3567778888764
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0033 Score=48.53 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=54.9
Q ss_pred CCCCCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 55 PKGHNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 55 ~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
|.+...|..+.+... .+++.++|.-+.... .-.|+|... +..+...... . ..-..+.++.+|+
T Consensus 5 pep~~pP~~l~v~~~---~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---~------~~~~t~~~v~~L~ 71 (108)
T 1v5j_A 5 SSGLSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---V------AGTETELLVPGLI 71 (108)
T ss_dssp CCCCCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---E------CSSCCEEECCCCC
T ss_pred CCCCCCCcceEEEEe---CCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---c------CCCcCEEEeCCCC
Confidence 444567888888653 478999999885422 236788873 3334322211 1 1123345799999
Q ss_pred CCCEEEEEeCCC------CCCceEEEECCCCC
Q 017284 131 YDTKYYYKIGDG------DSSREFWFQTPPKI 156 (374)
Q Consensus 131 p~t~Y~Y~v~~~------~~s~~~~F~T~p~~ 156 (374)
|+++|.+||..- ..|+...++|....
T Consensus 72 pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 72 KDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp TTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred CCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcc
Confidence 999999998531 23555666665443
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0077 Score=47.15 Aligned_cols=88 Identities=14% Similarity=0.186 Sum_probs=51.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-C----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|..+.+.... .+ +.|+|..+...+ . -.|+|.......+.... .... ...-...++|++|+|+|
T Consensus 9 ~~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~L~p~t 78 (122)
T 2e3v_A 9 SSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK----EASMEGIVTIVGLKPET 78 (122)
T ss_dssp CCCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE---EEHH----HHHTTTEEEECSCCTTC
T ss_pred cCCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce---eeee----ecCccceEEeCCCCCCC
Confidence 347777776544 34 999999774332 2 24666665432221110 0000 00112356899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
.|.+||.. +.+|....|+|.|..
T Consensus 79 ~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 79 TYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred EEEEEEEEEeCCccCCCcccccccccCCC
Confidence 99999853 356777788887653
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.003 Score=49.29 Aligned_cols=75 Identities=21% Similarity=0.348 Sum_probs=45.7
Q ss_pred CCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCCC---CC
Q 017284 72 DGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDG---DS 144 (374)
Q Consensus 72 ~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~---~~ 144 (374)
..+++.|+|......+. -.|+|.......+..... .. +....++|+||+|++.|.+||..- +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----~~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----VQ------GNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----EE------TTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----cC------CCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 35899999986533222 368888875433332111 00 112246799999999999998541 22
Q ss_pred --CceEEEECCCCC
Q 017284 145 --SREFWFQTPPKI 156 (374)
Q Consensus 145 --s~~~~F~T~p~~ 156 (374)
.....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 224678887643
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0038 Score=48.41 Aligned_cols=89 Identities=16% Similarity=0.257 Sum_probs=54.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.... .+++.|+|..... .. .-.|+|....+....... .... ...+-...++|+||+|+
T Consensus 17 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~i~~L~p~ 88 (122)
T 1va9_A 17 GPPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVEM----KATGDSEVYTLDNLKKF 88 (122)
T ss_dssp SCCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCBC----CCCSSEEEEEEESCCSS
T ss_pred CCCcceEEEecc--CCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE--EEEE----ecCCceeEEEeCCCCCC
Confidence 367778776543 5899999998753 11 235677665532111000 0000 01123456789999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.|.+||.. +.+|....|+|.+.
T Consensus 89 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 89 AQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred CEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 999999853 35677788888754
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.014 Score=44.63 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=48.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..|++.-.. .+++.++|..+..+.. -.|.|..... . .... .-...++|+||+|||.
T Consensus 9 s~v~~l~v~~~t--~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~-~~~~------~~~t~~~i~gL~PgT~ 71 (104)
T 2dle_A 9 IQVFDVTAVNIS--ATSLTLIWKVSDNESSSNYTYKIHVAGETD--------S-SNLN------VSEPRAVIPGLRSSTF 71 (104)
T ss_dssp CBEEEEEEEEEC--SSCEEEEEEESCSTTCCSCEEEEEEECSSC--------E-EEEE------ESSSEEECCSCCSSCE
T ss_pred CCCceEEEEEee--cCEEEEEEcCCCCCCCceEEEEEEEECCCC--------e-EEEc------CCCCEEEECCCCCCCE
Confidence 455666665443 5899999997643322 3455553311 0 0100 0123578999999999
Q ss_pred EEEEeCC--C---CCCceEEEECCCCC
Q 017284 135 YYYKIGD--G---DSSREFWFQTPPKI 156 (374)
Q Consensus 135 Y~Y~v~~--~---~~s~~~~F~T~p~~ 156 (374)
|.++|.. + ..+....++|.|.+
T Consensus 72 Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 72 YNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp EEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred EEEEEEEEECCcccCCeeEEEEccCCC
Confidence 9999854 2 23445678887754
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.74 E-value=0.011 Score=44.70 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=50.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--C----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
.+|..+.+..-. .+++.|+|..+.. . ..-.|.|....+...... ...... .. ...+.|++|+|+
T Consensus 6 ~~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~--~~~~v~----~~--~~~~~l~~L~p~ 75 (102)
T 3n1f_C 6 TGPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDY--KRDVVE----GS--KQWHMIGHLQPE 75 (102)
T ss_dssp SCCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGC--EEEEEE----TT--CSEEEECSCCTT
T ss_pred CCCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCce--EEEEEc----CC--ceEEECCCCCCC
Confidence 568888876543 5889999997642 1 123678887654210000 001111 01 123689999999
Q ss_pred CEEEEEeCC------CCCCceEEEEC
Q 017284 133 TKYYYKIGD------GDSSREFWFQT 152 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T 152 (374)
|.|..+|.. +..|....++|
T Consensus 76 t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 76 TSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CEEEEEEEEECCCcCCCCCCCEEeec
Confidence 999999843 34667777776
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.014 Score=49.76 Aligned_cols=88 Identities=13% Similarity=0.137 Sum_probs=53.7
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC-----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~-----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
+..|..+.+.... .++.|+|..+... ..-.|+|.......+....- . ..........++++|+|+
T Consensus 9 P~~P~~~~~~~~~---~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~i~~L~p~ 78 (209)
T 2vkw_A 9 PSSPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY-----D--AKEASMEGIVTIVGLKPE 78 (209)
T ss_dssp CCCCEEEEEEECS---SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEE-----E--HHHHHHHSEEEECCCCTT
T ss_pred CcCCcccEeeecc---CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEe-----e--ccCCCccceEEeCCCCCC
Confidence 3568888887654 2689999987421 22357777665433322110 0 000011235689999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.|.|||.. +.+|....++|.+.
T Consensus 79 t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 79 TTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred CeEEEEEEEEcCCcccCCcccccccccCC
Confidence 999999853 24566777888764
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0018 Score=60.26 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNH 235 (374)
.++.++||+|... ..+..+.+. ..+-+|++||++..+.. . .+....+..+... -.++.+.|||
T Consensus 57 ~~i~viGDIHG~~---~~L~~ll~~~g~~~~~~~vflGD~VDRG~~-----s---~evl~lL~~lk~~~p~~v~~lrGNH 125 (330)
T 1fjm_A 57 APLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGKQ-----S---LETICLLLAYKIKYPENFFLLRGNH 125 (330)
T ss_dssp SSEEEECBCTTCH---HHHHHHHHHHCSTTSSCEEECSCCSSSSSC-----H---HHHHHHHHHHHHHSTTTEEECCCTT
T ss_pred CceEEecCCCCCH---HHHHHHHHHhCCCCcceEEeCCCcCCCCCC-----h---HHHHHHHHHhhhhcCCceEEecCCc
Confidence 4689999999764 333333332 45789999999964321 1 2223333333222 3489999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 126 E~~ 128 (330)
T 1fjm_A 126 ECA 128 (330)
T ss_dssp SSH
T ss_pred hHh
Confidence 974
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.017 Score=43.83 Aligned_cols=86 Identities=19% Similarity=0.305 Sum_probs=50.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+.-- ..+++.|+|.-+... ..-.|+|.......... . ... ..-...++|+||+|||.|.+
T Consensus 4 ~~P~~l~v~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~~~~~l~~L~p~t~Y~~ 71 (104)
T 2rb8_A 4 DAPSQIEVKDV--TDTTALITWMPPSQPVDGFELTYGIKDVPGDRT---T-IDL------TEDENQYSIGNLKPDTEYEV 71 (104)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE---E-EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCccEEEEe--cCCeEEEEEcCCCCccceEEEEEEECcCCCceE---E-EEc------CCCcCEEEeCCCCCCCEEEE
Confidence 46777777643 358999999876422 12357776643211111 0 000 01123468999999999999
Q ss_pred EeCC----C-CCCceEEEECCCCC
Q 017284 138 KIGD----G-DSSREFWFQTPPKI 156 (374)
Q Consensus 138 ~v~~----~-~~s~~~~F~T~p~~ 156 (374)
+|.. + +......|+|.+..
T Consensus 72 ~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 72 SLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp EEEEEETTEECCCEEEEEECCC--
T ss_pred EEEEEeCCccCCCEEEEEECCCCc
Confidence 9853 1 22345678887653
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.017 Score=43.32 Aligned_cols=71 Identities=18% Similarity=0.334 Sum_probs=44.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.++.- ..+++.|+|.-+..+ ..-.|+|........... ... ..-...++|+||+|+|.|.+
T Consensus 3 ~~P~~l~~~~~--~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t~Y~~ 70 (100)
T 3b83_A 3 QPPFNIKVTNI--TLTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----VDL------TSSITSLTLTNLEPNTTYEI 70 (100)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----EEE------CTTEEEEEECSCCTTCEEEE
T ss_pred ccCCccEEEEe--cCCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----EEE------CCcceEEEECCCCCCCEEEE
Confidence 45777777643 358999999876432 234577876543221110 000 11234678999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
||..
T Consensus 71 ~V~A 74 (100)
T 3b83_A 71 RIVA 74 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.029 Score=47.80 Aligned_cols=84 Identities=14% Similarity=0.056 Sum_probs=52.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC--------CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~--------~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
..|..+.+.... .++++|+|..+..+ ..-.|+|....+........ ..-...++|++|+
T Consensus 6 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 6 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 72 (211)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCC
T ss_pred CCCCCEEEEecC--CCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcC
Confidence 468888876544 47899999975311 12457777654321111110 0113356799999
Q ss_pred CCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 131 YDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|+|.|.++|.. +.+|....++|.+.
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 99999999853 24566788898653
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0057 Score=48.10 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=26.5
Q ss_pred EEEeCCCCCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.++++||+|+|+|.+||.. +.+|+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 3789999999999999854 23577788999765
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.013 Score=45.44 Aligned_cols=72 Identities=22% Similarity=0.328 Sum_probs=43.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecC-CCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLE-KKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+..-. .+++.|.|.-....+ .-.|+|.... +..+...... . ..-...++|++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~------~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 19 EAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---I------PPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---E------CTTCCEEEEESCCTTC
T ss_pred ccCCCCEEEEcc--CCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---c------CCCcCEEEECCCCCCC
Confidence 467677666433 479999999543222 2357777765 2233222111 0 1123456789999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.023 Score=41.33 Aligned_cols=66 Identities=20% Similarity=0.366 Sum_probs=40.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.+|..+.++... .+++.++|..... ......|....+. . .. +. . .. -..++++|+||++|+|+
T Consensus 5 ~~P~~l~~~~~~--~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~-~~-~~--~-------~~--~~~~~~~L~~~t~Y~~~ 67 (88)
T 1k85_A 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-A-LA-TT--V-------TG--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-S-EE-EE--E-------SS--SEEEECCCCSSCEEEEE
T ss_pred CCCCccEEEecc--CCEEEEEECCCCC-CCCccEEEEEECC-E-EE-ee--c-------CC--CEEEeCCCCCCCEEEEE
Confidence 467777776543 4789999987643 2234555543221 1 11 11 0 11 13568999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 68 V~A 70 (88)
T 1k85_A 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.003 Score=49.17 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=49.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-----CCceEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-----~~~~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+... ...+++.|.|..+... ..-.|+|....+. .+..+. . . -....++++|+|+
T Consensus 19 ~~P~~~~~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------~----~--~~~~~~v~~L~p~ 85 (120)
T 2crm_A 19 GIPVKPSVKGK-IHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------S----G--ATREHLCDRLNPG 85 (120)
T ss_dssp CCCCCCEEEEE-EETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------C----S--SCSEEEECSCCTT
T ss_pred CCCCCCEEeec-cCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------e----c--cccEEEECCCCCC
Confidence 45555555411 1247899999876432 1235677665431 222211 0 0 1224678999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.|.|||.. +.+|....++|.+.
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 86 CFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp SCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 999999853 24566667777653
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0044 Score=58.11 Aligned_cols=67 Identities=19% Similarity=0.144 Sum_probs=41.8
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh------------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-----
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA----- 223 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~------------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~----- 223 (374)
..+++++||+|... ..+..+.+. ++|.++++||++..+.. . .+....+..+.
T Consensus 70 ~~~i~vigDiHG~~---~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~-----s---~evl~~l~~l~~~~~~ 138 (342)
T 2z72_A 70 IKKVVALSDVHGQY---DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQ-----V---NEVLWFMYQLDQQARD 138 (342)
T ss_dssp CCEEEEECCCTTCH---HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSC-----H---HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH---HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCC-----H---HHHHHHHHHHHHHHhh
Confidence 57899999999653 334443332 36899999999964321 1 12223333332
Q ss_pred hcCCeEEcCCCcccc
Q 017284 224 AYQPWIWSAGNHEIE 238 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (374)
...+++.+.||||..
T Consensus 139 ~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 139 AGGMVHLLMGNHEQM 153 (342)
T ss_dssp TTCEEEECCCHHHHH
T ss_pred CCCeEEEEecCCcHH
Confidence 234589999999974
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.02 Score=43.77 Aligned_cols=82 Identities=15% Similarity=0.130 Sum_probs=51.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC---CC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE---LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~---~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
..|..+.+..-....+++.|+|..+.. +. .-.|+|...++..+..... .. ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------SN--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------SS--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------cc--CCEEEEeCCCC
Confidence 568888887543335789999998753 22 3467888776543322111 01 12467899999
Q ss_pred CCEEEEEeCCC--------CCCceEEEEC
Q 017284 132 DTKYYYKIGDG--------DSSREFWFQT 152 (374)
Q Consensus 132 ~t~Y~Y~v~~~--------~~s~~~~F~T 152 (374)
||.|..||..- .||....++|
T Consensus 77 ~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 77 GKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 99999998642 3555555554
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0032 Score=58.09 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=39.9
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCC
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAG 233 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~G 233 (374)
..+++++||+|... ..+.++.+. ..+.++++||++..+.. . .+....+..+... -.++.+.|
T Consensus 59 ~~ri~viGDIHG~~---~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~-----s---~evl~lL~~lk~~~p~~v~~lrG 127 (315)
T 3h63_A 59 TEKITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGSF-----S---VEVILTLFGFKLLYPDHFHLLRG 127 (315)
T ss_dssp TCEEEEECCCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT-----H---HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CceEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCccCCCcC-----h---HHHHHHHHHhhhhcCCcEEEEec
Confidence 35899999999763 233333332 23469999999964321 1 1222333333222 24888999
Q ss_pred Ccccc
Q 017284 234 NHEIE 238 (374)
Q Consensus 234 NHD~~ 238 (374)
|||..
T Consensus 128 NHE~~ 132 (315)
T 3h63_A 128 NHETD 132 (315)
T ss_dssp TTSSH
T ss_pred Ccccc
Confidence 99964
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0028 Score=58.08 Aligned_cols=65 Identities=22% Similarity=0.260 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNHD 236 (374)
+++++||+|.... .+.++.+. ..+-++++||++..+.. . .+....+..+... -.++.+.||||
T Consensus 57 ~i~viGDIHG~~~---~L~~ll~~~g~~~~~~~vfLGD~VDrG~~-----s---~evl~lL~~lk~~~p~~v~~lrGNHE 125 (299)
T 3e7a_A 57 PLKICGDIHGQYY---DLLRLFEYGGFPPESNYLFLGDYVDRGKQ-----S---LETICLLLAYKIKYPENFFLLRGNHE 125 (299)
T ss_dssp SEEEECBCTTCHH---HHHHHHHHHCSTTSSCEEECSCCSSSSSC-----H---HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CEEEEecCCCCHH---HHHHHHHHhCCCCCccEEeCCcccCCCCC-----c---HHHHHHHHHHHhhCCCcEEEEecCch
Confidence 6899999998643 33333322 55789999999964322 1 1222333333222 34889999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 126 ~~ 127 (299)
T 3e7a_A 126 CA 127 (299)
T ss_dssp SH
T ss_pred hh
Confidence 64
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.015 Score=45.43 Aligned_cols=88 Identities=15% Similarity=0.035 Sum_probs=50.7
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeec---CCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKL---EKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
+..|..+.+..- ..+++.|.|.-....+ .-.|+|... ....+..+... . .......+++++|+
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~ 87 (124)
T 1wis_A 18 PGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLN 87 (124)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCC
T ss_pred CccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCC
Confidence 357877777643 3579999996553322 235777763 22222221100 0 01123357899999
Q ss_pred CCCEEEEEeCC------CCCCc-eEEEECCCC
Q 017284 131 YDTKYYYKIGD------GDSSR-EFWFQTPPK 155 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~-~~~F~T~p~ 155 (374)
|+|.|.+||.. +..|. ...++|.+.
T Consensus 88 p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 88 PFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp TTSEECCCCEEECSSCBCCCCCCCCCEECCCS
T ss_pred CCCEEEEEEEEEECCccCCCcCCccceEcCCC
Confidence 99999999853 23343 245778764
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0053 Score=47.52 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=51.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCce----EEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNR----VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~----V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+... ..+++.|+|..+....... |+|....+...... ... ...-...++|++|+|+|.
T Consensus 20 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~----~~~-----~~~~~~~~~i~~L~p~t~ 88 (121)
T 2dlh_A 20 SAPRDVQARML--SSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNW----MKH-----NVADSQITTIGNLVPQKT 88 (121)
T ss_dssp SCCEEEEECCC--SSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTS----CCC-----CCSSCSEECCBSCCSSCE
T ss_pred CCCcccEEEec--CCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCcccc----EEE-----ecCCceEEEecCCCCCCE
Confidence 46777776543 3579999999875433333 44443322110000 000 001123568999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.+||.. +.+|....|+|.+.
T Consensus 89 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 89 YSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 9999843 35677889999764
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0041 Score=50.19 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=27.8
Q ss_pred EEEEeCCCCCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 122 HHCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 122 ~~v~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
..++|+||+|+|.|..||.. |..|....|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 45789999999999999843 35677888999864
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0043 Score=57.73 Aligned_cols=67 Identities=16% Similarity=0.286 Sum_probs=40.2
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCC
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAG 233 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~G 233 (374)
..++.++||+|.... .+.++.+. .. +.+|++||++..+.. . .+....+..+... -.++.+.|
T Consensus 63 ~~ri~viGDIHG~~~---~L~~ll~~~g~~~~~~~~vflGD~VDRG~~-----s---~evl~lL~~lk~~~p~~v~llrG 131 (335)
T 3icf_A 63 DVKISVCGDTHGQFY---DVLNLFRKFGKVGPKHTYLFNGDFVDRGSW-----S---CEVALLFYCLKILHPNNFFLNRG 131 (335)
T ss_dssp TCEEEEECCCTTCHH---HHHHHHHHHCCCBTTEEEEECSCCSSSSTT-----H---HHHHHHHHHHHHHCTTTEEECCC
T ss_pred CceEEEEecCCCCHH---HHHHHHHHcCCCCCCcEEEEeCCccCCCcC-----h---HHHHHHHHHHhhhCCCcEEEecC
Confidence 569999999998643 33333332 22 469999999964321 1 2222333333222 34889999
Q ss_pred Ccccc
Q 017284 234 NHEIE 238 (374)
Q Consensus 234 NHD~~ 238 (374)
|||..
T Consensus 132 NHE~~ 136 (335)
T 3icf_A 132 NHESD 136 (335)
T ss_dssp TTSSH
T ss_pred chhhh
Confidence 99963
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.011 Score=44.97 Aligned_cols=71 Identities=14% Similarity=0.225 Sum_probs=42.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-C----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.++... .++++|.|..+...+ . -.|+|.......+..... ........++++|+|+|
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 9 SPPTLLTVDSVT--DTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANK----------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCS----------SCCCSSEEEECSCCTTC
T ss_pred CCCCccEEEecc--CCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEecc----------ccCccCEEEECCCCCCC
Confidence 567777776443 478999999764322 2 246666554322211100 01122346789999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0037 Score=58.52 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=40.0
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
.+++++||+|.... .+.++.+. ..+-++++||++..+.. . .+-...+..+.... .++.+.|||
T Consensus 70 ~pi~ViGDIHG~~~---dL~~ll~~~g~~~~~~~vfLGD~VDRG~~-----s---~Evl~lL~~lk~~~p~~v~llrGNH 138 (357)
T 3ll8_A 70 APVTVCGDIHGQFF---DLMKLFEVGGSPANTRYLFLGDYVDRGYF-----S---IECVLYLWALKILYPKTLFLLRGNH 138 (357)
T ss_dssp SSEEEECCCTTCHH---HHHHHHHHHCCTTTCCEEECSCCSSSSTT-----H---HHHHHHHHHHHHHCTTTEEECCCTT
T ss_pred ccceeeccCCCCHH---HHHHHHHhcCCCCCcEEEECCCccCCCcC-----h---HHHHHHHHHhhhhcCCcEEEEeCch
Confidence 35899999998643 23333332 56889999999964321 1 12223333333222 488999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 139 E~~ 141 (357)
T 3ll8_A 139 ECR 141 (357)
T ss_dssp SSH
T ss_pred hhh
Confidence 964
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.024 Score=42.70 Aligned_cols=81 Identities=20% Similarity=0.394 Sum_probs=48.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|. +.+... ..+++.|+|..+.... .-.|+|.......+... .. ..-...++|++|+|+|.
T Consensus 9 ~~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~ 74 (107)
T 2dn7_A 9 GRPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DF------GKDDQHFTVTGLHKGTT 74 (107)
T ss_dssp CCCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EE------ETTCCEEEEECCCTTCE
T ss_pred CCCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----Ee------CCCccEEEeCCCCCCCE
Confidence 3455 566544 3589999999874322 23577776554322221 00 01123567999999999
Q ss_pred EEEEeCCC------CCCceEEEECCC
Q 017284 135 YYYKIGDG------DSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~~------~~s~~~~F~T~p 154 (374)
|.+||..- ..|. ..|+|++
T Consensus 75 Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 75 YIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEEEEcCCcccCCee-eEEeCCC
Confidence 99998541 2333 4577754
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0097 Score=46.84 Aligned_cols=84 Identities=24% Similarity=0.432 Sum_probs=50.8
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC--CCCce----EEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNR----VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~----V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.|..+.+.... .+++.|+|..... ..... |+|...... ...... ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCeeeEEEeCC--CCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEE----EeCCCccEEEeCCCCCCC
Confidence 57777776433 5899999998753 22233 344443210 000000 011223467899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.|.+||.. +.+|....|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 99999853 24677788999763
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.038 Score=43.12 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=48.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCC--CCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKK--YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
+..|..+.+..-. .+++.|.|.-....... .|+|...... .+.... ... .. ... .+.+|+|
T Consensus 17 P~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~----~~~----~~-~~~--~i~~L~p 83 (127)
T 1uey_A 17 PNPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT----EVS----GT-QTT--AQLNLSP 83 (127)
T ss_dssp CCCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE----EEE----SS-CCE--EEECCCT
T ss_pred CcCCCCcEEEEcc--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe----eeC----CC-ceE--EEecCCC
Confidence 3578888776543 57899999966433332 4566554321 111111 110 01 112 3569999
Q ss_pred CCEEEEEeCC------CCCCce-EEEECCCC
Q 017284 132 DTKYYYKIGD------GDSSRE-FWFQTPPK 155 (374)
Q Consensus 132 ~t~Y~Y~v~~------~~~s~~-~~F~T~p~ 155 (374)
+|.|.+||.. +.+|.. ..++|.+.
T Consensus 84 ~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 84 YVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp TCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred CCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 9999999853 234544 46888654
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0064 Score=46.95 Aligned_cols=71 Identities=15% Similarity=0.261 Sum_probs=42.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|..+.+.... .+++.|+|......+ .-.|+|....+..+... .. ...-...++|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~L~p~t~Y 86 (118)
T 2yrz_A 19 DTPTRLVFSALG--PTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL-------NI---PNPAQTSVVVEDLLPNHSY 86 (118)
T ss_dssp CCCCCCEECCCB--TTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE-------EE---SCTTCCEEEEESCCTTCEE
T ss_pred CCCCceEEEeCC--CCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE-------Ec---CCCCcCEEEeCCCCCCCEE
Confidence 467777665433 578999998775432 12456655443211111 00 0112335678999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.+||..
T Consensus 87 ~~~V~A 92 (118)
T 2yrz_A 87 VFRVRA 92 (118)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999854
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.02 Score=42.56 Aligned_cols=71 Identities=14% Similarity=0.280 Sum_probs=43.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.+.... .+++.|+|..+... ..-.|+|....+...... ... ..-...++|+||+|+|.|.+
T Consensus 3 ~~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 70 (98)
T 3teu_A 3 DAPTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKE----LTV------PPSSTSVTITGLTPGVEYVV 70 (98)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEE----EEE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEE----EEc------CCCcCEEEecCCCCCCEEEE
Confidence 357778776443 47899999987422 234677875543211110 111 11233578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 71 ~V~A 74 (98)
T 3teu_A 71 SVYA 74 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0042 Score=60.73 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=39.9
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
.++.++||+|.... .+.++.+. ..+-+|++||++..+.. . .+....+..+.... .++.+.|||
T Consensus 83 ~pI~VIGDIHGq~~---dL~~LL~~~g~p~~d~yVFLGDyVDRGp~-----S---~Evl~lL~aLk~~~P~~v~lLRGNH 151 (521)
T 1aui_A 83 APVTVCGDIHGQFF---DLMKLFEVGGSPANTRYLFLGDYVDRGYF-----S---IECVLYLWALKILYPKTLFLLRGNH 151 (521)
T ss_dssp SSEEEECCCTTCHH---HHHHHHHHHCCTTTCCEEECSCCSSSSSC-----H---HHHHHHHHHHHHHSTTTEEECCCTT
T ss_pred cceeeccCCCCCHH---HHHHHHHhcCCCCcceEEEcCCcCCCCCC-----H---HHHHHHHHHHhhhCCCeEEEecCCc
Confidence 36899999997543 23333222 45889999999964321 1 22223333333223 388999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 152 E~~ 154 (521)
T 1aui_A 152 ECR 154 (521)
T ss_dssp SSH
T ss_pred cHH
Confidence 964
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.011 Score=45.68 Aligned_cols=74 Identities=14% Similarity=0.175 Sum_probs=41.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.........+++.|+|......... .|+|.... ..+...... .......++++||+|+|
T Consensus 18 P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~---------~~~~~~~~~v~~L~p~t 87 (121)
T 1wf5_A 18 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLAS---------VDPKATSVTVKGLVPAR 87 (121)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESS---------CCTTCCEEEEESCCTTC
T ss_pred CccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcc---------cCCCccEEEECCcCCCC
Confidence 35566662222222357899999876433332 35555443 122111000 01123356899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1wf5_A 88 SYQFRLCA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999854
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.014 Score=50.00 Aligned_cols=88 Identities=20% Similarity=0.224 Sum_probs=53.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+...+...+++.|+|..+.... .-.|+|....+..+....-. ....-...++|++|+|+|.
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 176 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 176 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCCE
Confidence 56888887754333589999999764322 23567766543222211100 0011233568999999999
Q ss_pred EEEEeCC------C---CCCceEEEECCC
Q 017284 135 YYYKIGD------G---DSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~---~~s~~~~F~T~p 154 (374)
|.+||.. | .+|....++|.+
T Consensus 177 Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 177 YVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEccCCCCCccCCCCCcccccccc
Confidence 9999843 2 256677888865
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.017 Score=45.35 Aligned_cols=86 Identities=21% Similarity=0.196 Sum_probs=51.7
Q ss_pred CCceEEEEeeCCCCCceEEEEEcC--CCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTP--NELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~--~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.|..+.+.... .+++.|.|... ...... .|+|.......... .... ........++|+||+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-----~~~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVSMG--STTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGR-----HVVD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEECSS--SSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCC-----EEEC---CCBTTCSEEEEESCCTTC
T ss_pred CCcccEEEeCC--CCEEEEEecCCCccCCCCceeEEEEEEEECCCCCccc-----EEEE---eeCCCccEEEeCCCCCCC
Confidence 67777776443 57899999987 322222 45565544321110 0000 001123457899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.|.+||.. +.+|....++|.+.
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 99999843 35677778988754
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.02 Score=44.93 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=46.1
Q ss_pred CCceEEEEEcCCCCC---CceEEEeecCCC---CCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeC------
Q 017284 73 GKAVIISWVTPNELG---SNRVQYGKLEKK---YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG------ 140 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~---~~~V~y~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~------ 140 (374)
++++.|+|......+ .-.|.|+..... ..... ... ...-...++|+||+|+|.|..+|.
T Consensus 29 stsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~----~~v-----~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G 99 (120)
T 1ujt_A 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN----LDA-----KVPTERSAVLVNLKKGVTYEIKVRPYFNEF 99 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE----EEC-----CCTTCCEEEEESCCSSEEEEEEEEEESSSC
T ss_pred CceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE----EEe-----cCCCcCEEEECCCCCCCEEEEEEEEECCCc
Confidence 588999999642111 226788876541 11110 000 111234678999999999999984
Q ss_pred CCCCCceEEEECCCC
Q 017284 141 DGDSSREFWFQTPPK 155 (374)
Q Consensus 141 ~~~~s~~~~F~T~p~ 155 (374)
.|..|....|+|+..
T Consensus 100 ~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 100 QGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCEEEEECSS
T ss_pred cCCCCCCEEEECCCC
Confidence 345677888999754
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.01 Score=45.39 Aligned_cols=71 Identities=17% Similarity=0.274 Sum_probs=43.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.++... .+++.|+|......+ .-.|+|....+..+..... ...-...+++++|+|+|
T Consensus 10 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 77 (111)
T 1x5y_A 10 SAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGA 77 (111)
T ss_dssp CCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTC
T ss_pred cCCCCCEEEecc--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc----------cCCcccEEEECCCCCCC
Confidence 568777776543 478999999764322 2356776654332221110 00112346789999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 78 ~Y~frV~A 85 (111)
T 1x5y_A 78 RILFRVVG 85 (111)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.051 Score=47.22 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=53.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+.... .+++.|+|..... ...-.|+|....+.......-. .....++|++|+|+|.|.+
T Consensus 7 ~~P~~l~~~~~~--~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 7 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred CCCcceEEEEcC--CCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEE
Confidence 578888877544 5789999998632 2234577776554322111100 1123467999999999999
Q ss_pred EeCC------CCCCceEEEECCC
Q 017284 138 KIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 138 ~v~~------~~~s~~~~F~T~p 154 (374)
+|.. +..|....++|.+
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCCcCCCCCeEEEEcCC
Confidence 9843 2456677888874
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.027 Score=43.39 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=49.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+++..- ..+++.|+|..+... ..-.|+|....+... . ... ..-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~~~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~-----~~v------~~~~t~~~l~~L~P~t~Y~~ 74 (115)
T 2cuh_A 9 DGPTQLRALNL--TEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-Q-----AET------PGSAVDYPLHDLVLHTNYTA 74 (115)
T ss_dssp SSCEEEECCCC--SSSCEEEEEECCSSCCSEEEEEEECSSSCCE-E-----EEE------ETTCSEEEECSCCSSSEEEE
T ss_pred CCCcceEEEec--cCCeEEEEEECCCCCccEEEEEEEcCCCCcE-E-----EEE------CCCccEEEEeCCCCCCEEEE
Confidence 46776665533 358999999875322 223577765432111 0 010 01123578999999999999
Q ss_pred EeCC--C---CCCceEEEECCCC
Q 017284 138 KIGD--G---DSSREFWFQTPPK 155 (374)
Q Consensus 138 ~v~~--~---~~s~~~~F~T~p~ 155 (374)
+|.. + .......|+|.+.
T Consensus 75 ~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 75 TVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCcCCCEEEEEEeCCC
Confidence 9853 1 2234567888754
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.028 Score=43.08 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=51.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..|.++-- ..+++.|+|..... ...-.|+|....+....... . . +-...+.|+||+|+|.|..
T Consensus 9 ~pP~~l~~~~v--t~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~----v-~------~~~t~~~l~~L~p~T~Y~v 75 (108)
T 2ee3_A 9 APPRHLGFSDV--SHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE----A-P------GNATSAMLGPLSSSTTYTV 75 (108)
T ss_dssp CCSSCEEEESC--CSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE----E-E------TTCCEEEECSCCSSCEEEE
T ss_pred CCCceEEEEEc--cCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE----c-C------CCcCEEEcCCCCCCCEEEE
Confidence 46778887643 36899999986532 22346788776543221111 0 0 0123468999999999999
Q ss_pred EeCC---CCCC--ceEEEECCCCC
Q 017284 138 KIGD---GDSS--REFWFQTPPKI 156 (374)
Q Consensus 138 ~v~~---~~~s--~~~~F~T~p~~ 156 (374)
+|.. .+.+ -...|+|.+.+
T Consensus 76 ~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 76 RVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEeCCCcCCCccCEEEeCCCC
Confidence 9853 1222 23468887433
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.011 Score=45.73 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=52.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCC----ceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYD----SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
+-.|.+++++--. .++++|+|..+... ..-.|+|....+... ..-....... .+-...++|+||+|+
T Consensus 9 pp~p~~L~v~~~T--~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v------~~~~t~~~l~gL~Pg 80 (112)
T 2cui_A 9 RPRLSQLSVTDVT--TSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV------PGTRHSAVLRDLRSG 80 (112)
T ss_dssp CCCCCCCEEESCC--SSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE------ETTCCEEEECSCCTT
T ss_pred CCCCCceEEEeec--CCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEc------CCCcCEEEeCCCCCC
Confidence 3467777777543 58999999976422 244688876543200 0000000111 011236799999999
Q ss_pred CEEEEEeCC---CCC--CceEEEECCCCC
Q 017284 133 TKYYYKIGD---GDS--SREFWFQTPPKI 156 (374)
Q Consensus 133 t~Y~Y~v~~---~~~--s~~~~F~T~p~~ 156 (374)
|.|..+|.. +.. .-....+|.+.+
T Consensus 81 T~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 81 TLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp CEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 999999853 122 234567787644
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.035 Score=47.42 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCCCceEEEEeeC--CCCCceEEEEEcCCCCC--------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeC
Q 017284 58 HNAPQQVRITQGD--YDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (374)
Q Consensus 58 ~~~p~~v~lt~~~--d~~~~~~v~W~t~~~~~--------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~ 127 (374)
+..|..+.+.... ...+++.|+|..+.... .-.|+|....+..+... .. .....+.|.
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~------~~------~~~~~~~l~ 170 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH------FA------GQQTEFKIL 170 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE------EE------ETCSEEEEC
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE------ec------cCceEEEEe
Confidence 3578888887643 23578999999875332 12466766544332211 00 012356799
Q ss_pred CCCCCCEEEEEeCC-------CCCCceEEEECCC
Q 017284 128 DLEYDTKYYYKIGD-------GDSSREFWFQTPP 154 (374)
Q Consensus 128 gL~p~t~Y~Y~v~~-------~~~s~~~~F~T~p 154 (374)
+|+|+|.|..||.. +.||+...|+|+.
T Consensus 171 ~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 171 SLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 99999999999853 3578889999964
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.026 Score=48.13 Aligned_cols=84 Identities=17% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC-CC----CCceEEEeecCC-CCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN-EL----GSNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~-~~----~~~~V~y~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+... ..+++.|+|.... .. ..-.|+|..... ..+.... .. .......+|+||+|+
T Consensus 117 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~-----~~~~~~~~i~~L~p~ 184 (214)
T 2ibg_A 117 PVPELLEIEEY--SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT-----IE-----GAHARSFKIAPLETA 184 (214)
T ss_dssp CCCEECCCBCC--SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE-----EE-----CTTCCEEEECSCCTT
T ss_pred CCCcccEEEEc--cCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee-----cc-----CCcceEEEeCCCCCC
Confidence 34655554433 3578999999873 11 123577776554 1221111 00 111224578999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.|.|||.. +..|....++|..
T Consensus 185 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 185 TMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp CEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 999999843 3467788888864
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.033 Score=42.21 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=49.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.++.-. .+++.|+|.-+... ..-.|+|....+ .... . .. ..-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~v~~~~--~~sv~lsW~~p~~~i~~Y~i~y~~~~~-~~~~----~-~~------~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 9 EAPRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGG-QTQE----I-LL------PGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTS-CEEE----E-EE------CSSCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecc--CCEEEEEEcCCCCccceEEEEEEeCCC-ceEE----E-EE------CCCccEEEECCCCCCCEEEE
Confidence 467777766433 58899999876422 223577765443 1110 0 00 11233578999999999999
Q ss_pred EeCC----C-CCCceEEEECCCC
Q 017284 138 KIGD----G-DSSREFWFQTPPK 155 (374)
Q Consensus 138 ~v~~----~-~~s~~~~F~T~p~ 155 (374)
+|.. + ..+....|+|...
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEEeCCcccCCEEEEEEeCCc
Confidence 9853 1 2234567888643
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.023 Score=42.75 Aligned_cols=71 Identities=14% Similarity=0.252 Sum_probs=44.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC---CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE---LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~---~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|..++++--. .+++.|+|..+.. ...-.|+|....+..... . .... .-...++|+||+|+|.|
T Consensus 6 ~~P~~l~v~~~t--~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~---~-~~v~------~~~t~~~l~~L~p~t~Y 73 (101)
T 3k2m_C 6 SVPTKLEVVAAT--PTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ---E-FTVP------YSSSTATISGLSPGVDY 73 (101)
T ss_dssp BSSCEEEEEEEE--TTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE---E-EEEE------TTCCEEEECSCCTTCEE
T ss_pred CCCcceEEeecC--CCEEEEEecCCCCCCceeeEEEEEEECCCCCccE---E-EEcC------CCccEEEECCCCCCCEE
Confidence 467788887543 4899999997641 112357787754321111 0 0111 11236789999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
..+|..
T Consensus 74 ~~~V~A 79 (101)
T 3k2m_C 74 TITVYA 79 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999854
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.022 Score=51.66 Aligned_cols=88 Identities=20% Similarity=0.236 Sum_probs=55.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+...+...+++.|+|..+.... .-.|+|....+..+..+.-. + ...-....+|++|+|+|.
T Consensus 201 ~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~-------~-~~~~~~~~~l~~L~p~t~ 272 (303)
T 1i1r_A 201 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE-------D-TASTRSSFTVQDLKPFTE 272 (303)
T ss_dssp CCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG-------G-GCSCCSEEEECSCCTTCE
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc-------c-CCCceeEEEeCCCCCCCE
Confidence 56888887654334589999999774322 23577777653333221100 0 011223568999999999
Q ss_pred EEEEeCC------C---CCCceEEEECCC
Q 017284 135 YYYKIGD------G---DSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~---~~s~~~~F~T~p 154 (374)
|.+||.. | .||+...|+|+.
T Consensus 273 Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 273 YVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999843 2 367788899865
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.031 Score=43.54 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=51.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcC--CCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTP--NELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~--~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.... ..+++.|+|.-+ ....-. .|+|....... ........ ......++|++|+|+
T Consensus 20 ~~P~~~~~~~~~-s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~----~~~~~~~~-----~~~~~~~~l~~L~p~ 89 (124)
T 2dbj_A 20 VAPLNVTVFLNE-SSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGI----SKELLEEV-----GQNGSRARISVQVHN 89 (124)
T ss_dssp SCCEEEEEEECS-SSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTE----EEEEEEEE-----ESTTSCEEEECCCSS
T ss_pred CCCcceEEEecC-CCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCC----ccceEEEe-----CCCcceEEecCCCCC
Confidence 467777776321 257999999987 322222 34443221110 00100000 011235679999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
|.|.+||.. +.+|....++|++..
T Consensus 90 t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 90 ATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp SEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred CEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 999999843 457888999998753
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.079 Score=40.91 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=36.0
Q ss_pred CCceEEEEEcCCCCCCc----eEEEeecC-CCCCceEEeEEEEEEee--cccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNELGSN----RVQYGKLE-KKYDSSAEGTVTNYTFY--KYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~~~----~V~y~~~~-~~~~~~~~g~~~~~~~~--~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.++++|.|..+...+.. .|+|...+ +..+..+... ..+... ....+-...++++||+|+|.|.+||..
T Consensus 16 ~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 16 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEE-EECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECccc-ccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 58999999987544433 46666652 2233322211 111000 000123346789999999999999853
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0067 Score=59.46 Aligned_cols=67 Identities=15% Similarity=0.142 Sum_probs=40.0
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhh--hcCCeEEcCC
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA--AYQPWIWSAG 233 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~--~~~P~~~v~G 233 (374)
..+++++||+|... ..+..+.+. ..+.+|++||++..+.. . .+....+..+. ....++.+.|
T Consensus 212 ~~~~~vigDiHG~~---~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~-----s---~e~~~~l~~l~~~~~~~~~~lrG 280 (477)
T 1wao_1 212 TEKITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGSF-----S---VEVILTLFGFKLLYPDHFHLLRG 280 (477)
T ss_dssp SCEEEEECBCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT-----H---HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CcceEEEeCCCCCH---HHHHHHHHHcCCCCCcCeEEEeccccCCCcc-----h---HHHHHHHHHHHhhCCCceEeecC
Confidence 46899999999753 333333332 23569999999964321 1 11222222221 2346899999
Q ss_pred Ccccc
Q 017284 234 NHEIE 238 (374)
Q Consensus 234 NHD~~ 238 (374)
|||..
T Consensus 281 NHE~~ 285 (477)
T 1wao_1 281 NHETD 285 (477)
T ss_dssp TTSSH
T ss_pred CccHH
Confidence 99953
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.018 Score=44.69 Aligned_cols=71 Identities=18% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
+..|..+.+.... .+++.|.|..+...+ .-.|+|.......+..+... .....+++++|+|+
T Consensus 18 P~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-----------~~~~~~~v~~L~p~ 84 (120)
T 2yux_A 18 PGPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-----------YHRTSATITELVIG 84 (120)
T ss_dssp CCCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-----------CCSSCCEECCCCSS
T ss_pred CCcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-----------CCcCEEEECCCCCC
Confidence 3567777776433 479999998764322 24678877654333322110 11223578999999
Q ss_pred CEEEEEeCC
Q 017284 133 TKYYYKIGD 141 (374)
Q Consensus 133 t~Y~Y~v~~ 141 (374)
|.|.|||..
T Consensus 85 t~Y~frV~A 93 (120)
T 2yux_A 85 NEYYFRVFS 93 (120)
T ss_dssp EEEEEEECC
T ss_pred CEEEEEEEE
Confidence 999999965
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.013 Score=45.22 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=36.8
Q ss_pred CCceEEEEEcCCC-----CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNE-----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~-----~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.++++|.|..+.. ...-.|+|...++..+..+... ....-.++++||+|+|.|.|||..
T Consensus 24 ~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 24 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEE
Confidence 4789999995421 2234688887654333222110 001123578999999999999864
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0091 Score=46.48 Aligned_cols=89 Identities=21% Similarity=0.315 Sum_probs=52.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CC----CceEEEeecCCCCC---ceEEeEEEEEEeecccccEEEEEEeCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LG----SNRVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~----~~~V~y~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~v~l~gL 129 (374)
..|..+.+.... .+++.|+|..... .. .-.|+|....+... .........+. .-...++|+||
T Consensus 16 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L 87 (125)
T 1uen_A 16 VAPGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGL 87 (125)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESC
T ss_pred CCCceeEEEecC--CcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCC
Confidence 467777776443 4789999987631 11 23566666543321 00001111111 12345789999
Q ss_pred CCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 130 EYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 130 ~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
+|+|.|.+||.. +.+|....|+|.+.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 999999999853 23567778998754
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.028 Score=42.76 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=40.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.+|..+.++.... .+++.++|..... ......|+...........++.. . .. ..+.++|+||++|+|+
T Consensus 6 ~aP~~l~a~~~~~-~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i~~~~--~----~t----sy~d~~l~~g~~Y~Y~ 73 (103)
T 3mpc_A 6 AFPTGLSAVLDSS-GNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTIATNI--T----ST----NYTDTGVATGTKYYYV 73 (103)
T ss_dssp CCCEEEEEEECTT-SCCEEEEEECCTT-CSEEEEEEESSTTCCCEEEEEEE--C----SS----EEEETTCCTTCCCEEE
T ss_pred CCCceeEEEEeCC-CCEEEEEEECCCC-CCEEEEEEecCCCCCcEEEeecC--C----CC----EEEECCCCCCCEEEEE
Confidence 5788888776422 3689999998643 34444455443211111111100 0 11 1245799999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 74 V~A 76 (103)
T 3mpc_A 74 VSA 76 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.033 Score=47.48 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=51.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+... ..++.+.|..+... +.+ .|+|...+...+....- ... ........+|.+|+|++
T Consensus 115 ~~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~-----~~~--~~~~~~~l~i~~L~~~~ 184 (215)
T 3mtr_A 115 SSPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY-----DAK--EASMEGIVTIVGLKPET 184 (215)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEE-----EHH--HHHHHTEEEEECCCTTC
T ss_pred CCCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCccccccc-----ccc--cccccccEEECCCCCCC
Confidence 45666655433 36799999855321 122 47777766543322110 000 00011456799999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPKIH 157 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~~~ 157 (374)
.|.|||.. +.+|....|+|+|..+
T Consensus 185 ~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 185 TYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 99999943 3567788899998653
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.013 Score=45.02 Aligned_cols=70 Identities=13% Similarity=0.103 Sum_probs=41.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+.... .+++.|.|........ -.|+|....+. .+.... . ......+++++|+|+|
T Consensus 17 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~-----~~~~~~~~i~~L~p~t 83 (117)
T 1uem_A 17 GPPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA------N-----HVKTTLYTVRGLRPNT 83 (117)
T ss_dssp BCCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE------E-----EECSSEEEECSCCTTC
T ss_pred cCCCCCEEEEec--CCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc------c-----ccCcCEEEECCCCCCC
Confidence 457777776433 4789999987642222 34666554311 111110 0 0012246899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 84 ~Y~frV~A 91 (117)
T 1uem_A 84 IYLFMVRA 91 (117)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.017 Score=43.69 Aligned_cols=71 Identities=15% Similarity=0.288 Sum_probs=44.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+++.--. .+++.|+|..+... ..-.|+|.......... . ... ..-...++|+||+|+|.
T Consensus 9 ~~P~~l~v~~~t--~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~ts~~l~~L~p~t~ 76 (103)
T 3t04_D 9 SVPTKLEVVDAT--PTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E-FTV------PGYYSTATISGLKPGVD 76 (103)
T ss_dssp CCCCSCEEEEEE--TTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E-EEE------ETTCCEEEECSCCTTCC
T ss_pred CCCceeEEEecC--CCEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E-EEc------CCCcCEEEeCCCCCCCE
Confidence 467778876443 58999999977522 12367787754221111 0 010 11134578999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|..+|..
T Consensus 77 Y~~~V~A 83 (103)
T 3t04_D 77 YTITVYA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999853
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.082 Score=47.35 Aligned_cols=100 Identities=20% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
+.+|..|.+.... .+++.|+|...+. ...-.|+|....+....... .. ..-...+.|++|+|+|.|.
T Consensus 21 p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 21 IPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEEE
T ss_pred CCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEEE
Confidence 4678888886554 4789999998742 22346777765532221110 10 1123457899999999999
Q ss_pred EEeCCC-----CCCceEEEECCCCCCCCCCcEEEEEec
Q 017284 137 YKIGDG-----DSSREFWFQTPPKIHPDAPYTFGIIGD 169 (374)
Q Consensus 137 Y~v~~~-----~~s~~~~F~T~p~~~~~~~~~f~v~gD 169 (374)
++|..- .......++|.+.+..-..+++...++
T Consensus 89 ~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 89 VSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECS
T ss_pred EEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCC
Confidence 998531 111245677765442222344443333
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.058 Score=46.06 Aligned_cols=87 Identities=11% Similarity=0.080 Sum_probs=53.3
Q ss_pred CCCCceEEEEeeCC----CCCceEEEEEcCCCCC----CceEEEe-ecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 58 HNAPQQVRITQGDY----DGKAVIISWVTPNELG----SNRVQYG-KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 58 ~~~p~~v~lt~~~d----~~~~~~v~W~t~~~~~----~~~V~y~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
+..|..+.+....+ ..+++.|+|..+...+ .-.|+|. ..++..+..+.- . ......+.|.+
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----~------~~~~~~~~l~~ 178 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----L------PSSKDQFELCG 178 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----E------ESCEEEEEECC
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEec----c------cCcceEEEEcC
Confidence 35677777665311 3578999999774322 2356777 444333322211 0 11234578999
Q ss_pred CCCCCEEEEEeCC------C---CCCceEEEECCC
Q 017284 129 LEYDTKYYYKIGD------G---DSSREFWFQTPP 154 (374)
Q Consensus 129 L~p~t~Y~Y~v~~------~---~~s~~~~F~T~p 154 (374)
|+|+|.|..||.. | .||....|+|+.
T Consensus 179 L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999999999842 2 467888898864
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.046 Score=42.23 Aligned_cols=70 Identities=16% Similarity=0.335 Sum_probs=44.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.+.-.. .+++.|+|..+... ..-.|+|....+..... . ... .+-...++|+||+|+|.|..
T Consensus 5 ~~P~~L~v~~~t--~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~ts~~l~gL~P~T~Y~v 72 (114)
T 3qwq_B 5 DVPRDLEVVAAT--PTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E-FTV------PGPVHTATISGLKPGVDYTI 72 (114)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E-EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E-EEe------CCCcCEEEeCCCCCCCEEEE
Confidence 568888887543 48999999986422 23467887765421111 0 111 11123578999999999999
Q ss_pred EeC
Q 017284 138 KIG 140 (374)
Q Consensus 138 ~v~ 140 (374)
+|.
T Consensus 73 ~V~ 75 (114)
T 3qwq_B 73 TVY 75 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.035 Score=46.21 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=49.7
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
+..|..+.+.... .+++.|+|..+... ..-.|+|....+..... ... .+-...++|+||+|+|.|.
T Consensus 95 p~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-----~~~------~~~~~~~~i~~L~p~t~Y~ 161 (186)
T 1qr4_A 95 VGSPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNV-----VTV------DGSKTRTKLVKLVPGVDYN 161 (186)
T ss_dssp CCCCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEE-----EEE------ETTCCEEEECSCCSSCEEE
T ss_pred CCCCCccEEEEeC--CCEEEEEEECCCCcccEEEEEEEeCCCCCceE-----EEc------CCCcCEEEEcCCCCCCEEE
Confidence 3567777766433 58999999876422 23456777654321111 111 0112456799999999999
Q ss_pred EEeCC---C--CCCceEEEECCCC
Q 017284 137 YKIGD---G--DSSREFWFQTPPK 155 (374)
Q Consensus 137 Y~v~~---~--~~s~~~~F~T~p~ 155 (374)
++|.. + .......|+|.|.
T Consensus 162 ~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 162 VNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEEcCCCcCcCEEEEEEecCC
Confidence 99853 1 2234567888764
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.059 Score=42.08 Aligned_cols=71 Identities=15% Similarity=0.310 Sum_probs=44.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.+.... .+++.|+|.-+... ..-.|+|....+..... . .... .-...++|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~---~-~~v~------~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ---E-FTVP------GSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEETTTCSCBE---E-EEEE------TTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEecC--CCEEEEEEcCCCCCCcEEEEEEEECCCCCccE---E-EEeC------CCcCEEEeCCCCCCCEEEE
Confidence 578888887544 58999999876421 23457777655422110 0 0100 1123578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.056 Score=40.35 Aligned_cols=70 Identities=21% Similarity=0.285 Sum_probs=42.3
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC-CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG-SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|..+.++- ...+++.|+|..+..+- .-.|+|....+..... ..... .-.-.++|+||+|+|.|.++
T Consensus 4 ~P~~l~v~~--~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~~~------~~~t~~~l~gL~P~t~Y~~~ 71 (98)
T 3tes_A 4 APKNLVVSE--VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NLTVP------GSERSYDLTGLKPGTEYTVS 71 (98)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EEEEE------TTCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEe--cCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EEEcC------CCcCEEEECCCCCCCEEEEE
Confidence 355666653 34689999999775322 3357787764211111 01110 11235789999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 72 V~A 74 (98)
T 3tes_A 72 IYG 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.078 Score=44.80 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+.. . .+++.|+|........ -.|+|....+. .+....... . .. .....+ +|+|+|
T Consensus 7 ~~P~~~~~~~-~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---~----~~--~~~~~~-~L~p~t 73 (205)
T 1cfb_A 7 NAPKLTGITC-Q--ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---P----NT--DSSFVV-QMSPWA 73 (205)
T ss_dssp CCCEEEEEEE-C--SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE---E----TT--CSEEEE-ECCSSE
T ss_pred CCCCCcEEEe-c--CCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc---C----CC--ceEEEE-eCCCCC
Confidence 5788888877 3 5899999998742222 35777665322 222211111 0 01 112345 999999
Q ss_pred EEEEEeCC------CCCC-ceEEEECCCC
Q 017284 134 KYYYKIGD------GDSS-REFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s-~~~~F~T~p~ 155 (374)
.|.+||.. +..| ....++|.+.
T Consensus 74 ~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 74 NYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 99999853 2344 4467777653
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.029 Score=41.72 Aligned_cols=71 Identities=14% Similarity=0.287 Sum_probs=44.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+++.--. .+++.|+|..+... ..-.|+|....+..... . ... .+-...++|+||+|+|.|..
T Consensus 6 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~t~~~l~~L~p~t~Y~v 73 (97)
T 3qht_C 6 SVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQ---E-FTV------PGSSSTATISGLSPGVDYTI 73 (97)
T ss_dssp CSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCE---E-EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccE---E-EEe------CCCcCEEEeCCCCCCCEEEE
Confidence 467778776543 48999999876321 22367787765421111 0 011 11134578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 74 ~V~A 77 (97)
T 3qht_C 74 TVYA 77 (97)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.64 E-value=0.044 Score=46.64 Aligned_cols=88 Identities=24% Similarity=0.411 Sum_probs=53.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+...+...+++.|+|..+.... .-.|+|....+...... ..... .+-...++|+||+|+|.
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 178 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTP 178 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEE------ESSCSEEEECCCCTTCE
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEe------cCCeeEEEEcCCCCCCE
Confidence 37888888766423479999999765322 23566765543221100 00011 11233568999999999
Q ss_pred EEEEeCC------CCCCceEEEECCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.++|.. +.+|....|+|..
T Consensus 179 Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 179 YYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEEcCCccCCCCCCEEccCcc
Confidence 9999843 4567788888764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.096 Score=44.40 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=53.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.|..+.+.... .+++.|+|...... ..-.|+|...++....... .. ..-...++++||+|+|.|.+
T Consensus 25 ~P~~l~~~~~~--~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFVDIT--DSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----FV------DSSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEECCT--TTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----EE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEecC--CCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----Ec------CCCccEEEeCCCCCCCEEEE
Confidence 46666665443 57899999987521 1345777766543221110 00 01123567899999999999
Q ss_pred EeCC---CCCCceEEEECCCCCCCCCCcEEEEEec
Q 017284 138 KIGD---GDSSREFWFQTPPKIHPDAPYTFGIIGD 169 (374)
Q Consensus 138 ~v~~---~~~s~~~~F~T~p~~~~~~~~~f~v~gD 169 (374)
+|.. .+.|....+.|.+...+-..+++...++
T Consensus 93 ~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 93 SVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 9853 2334444444432221223455444443
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.039 Score=54.78 Aligned_cols=84 Identities=24% Similarity=0.301 Sum_probs=49.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.. ...+++.|+|..+..+. .-.|+|....+..... ... .-...++|+||+|+|.
T Consensus 442 ~~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~------~v~------~~~ts~~l~gL~P~T~ 507 (536)
T 3fl7_A 442 TEPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYN------VRR------TEGFSVTLDDLAPDTT 507 (536)
T ss_dssp CCCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCE------EEE------ESSSEEECCSCCSSCE
T ss_pred cCCCCCceee--ccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEE------EEc------CCCCEEEECCCCCCCE
Confidence 3566666532 23588999999764332 2357777654431100 100 1123468999999999
Q ss_pred EEEEeCC------CCCCceEEEECCCCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
|.+||.. +.+|+...|+|++..
T Consensus 508 Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 508 YLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 9999853 346788899998753
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.11 Score=45.26 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=55.4
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC------CceEEEeecCC-CCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~~~V~y~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
+..|..+.+...+. ..++.|+|..+..+. .-.|+|....+ ..+..... ......+.+.+|+
T Consensus 113 PdPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~ 180 (223)
T 3up1_A 113 PEAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQ 180 (223)
T ss_dssp CCCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSC
T ss_pred cCCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccC
Confidence 36788888887654 356999999874321 23467776642 22322110 1122346688999
Q ss_pred CCCEEEEEeCC-------C---CCCceEEEECCCC
Q 017284 131 YDTKYYYKIGD-------G---DSSREFWFQTPPK 155 (374)
Q Consensus 131 p~t~Y~Y~v~~-------~---~~s~~~~F~T~p~ 155 (374)
|+|.|..||.. + .||....|+|++.
T Consensus 181 Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 181 PAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 99999999842 1 4678899999875
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.036 Score=40.76 Aligned_cols=70 Identities=19% Similarity=0.312 Sum_probs=42.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.|..++++.-. .+++.|+|..+.. ...-.|+|....+. ....... ..+-...++|+||+|||.|.++
T Consensus 4 ~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~ 71 (94)
T 1j8k_A 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFPA---PDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECCC---CCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEec---CCCCccEEEeCCCCCCCEEEEE
Confidence 46677776543 4799999976532 12345777765421 0000000 0112346789999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 72 V~A 74 (94)
T 1j8k_A 72 VVA 74 (94)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.085 Score=43.84 Aligned_cols=70 Identities=19% Similarity=0.283 Sum_probs=44.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|..+.+.... .+++.|.|...... ..-.|+|....+..+...... .-...+++++|+|+|
T Consensus 7 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 7 GPPQDLKVKEVT--KTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGC 73 (197)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTC
T ss_pred CCCCCcEEEEec--CCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCC
Confidence 468778776443 47899999987322 123677776654333222111 012346899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|+|..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=95.31 E-value=0.048 Score=46.32 Aligned_cols=71 Identities=13% Similarity=0.203 Sum_probs=42.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+++..-. .+++.|+|..+... ..-.|.|....+..... . ... ..-...++|+||+|+|.|.+
T Consensus 105 ~~P~~l~v~~~t--~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 105 SVPTNLEVVAAT--PTSLLISWDASYYGVSYYRITYGETGGNSPVQ---E-FTV------PYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp CSSCCCEEEEEE--TTEEEEECCCCCSSCSEEEEEEEETTCCSCCE---E-EEE------ETTCSEEEECSCCTTCEEEE
T ss_pred CCCcccEEEeCC--CCEEEEEEeCCCCCccEEEEEEEECCCCCcce---E-EEe------CCCCCEEEeCCCCCCCEEEE
Confidence 457777766443 47899999776421 23357776654321111 0 010 01124578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9853
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.1 Score=47.41 Aligned_cols=87 Identities=13% Similarity=0.017 Sum_probs=53.0
Q ss_pred CCCceEEEEeeCC----CCCceEEEEEcCCCCC----CceEEEe-ecCCCCCceEEeEEEEEEeecccccEEEEEEeCCC
Q 017284 59 NAPQQVRITQGDY----DGKAVIISWVTPNELG----SNRVQYG-KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (374)
Q Consensus 59 ~~p~~v~lt~~~d----~~~~~~v~W~t~~~~~----~~~V~y~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL 129 (374)
..|..+.+..... ..+++.|+|..+...+ .-.|+|. ..++..+..+... ......+.|.+|
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L 273 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGL 273 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSC
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCC
Confidence 5676666554311 2478999999864222 2357787 4443333322110 112456789999
Q ss_pred CCCCEEEEEeCC------C---CCCceEEEECCCC
Q 017284 130 EYDTKYYYKIGD------G---DSSREFWFQTPPK 155 (374)
Q Consensus 130 ~p~t~Y~Y~v~~------~---~~s~~~~F~T~p~ 155 (374)
+|+|.|..||.. | .||....++|+..
T Consensus 274 ~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 274 LPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 999999999852 3 3677888888753
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.18 E-value=0.046 Score=42.06 Aligned_cols=71 Identities=13% Similarity=0.211 Sum_probs=42.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|+|..+.... .-.|+|.......... .... ..-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~ 86 (119)
T 1wfn_A 19 GPVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THYL------PNVTLEYRVTGLTALTT 86 (119)
T ss_dssp CCCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEEE------CSSCCEEEEESCCTTCE
T ss_pred CCCCceEEEECC--CCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceE----EEEe------CCCceEEEEcCCCCCCE
Confidence 457677766433 578999998764332 2356666544221100 0000 11234567899999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 87 Y~~~V~A 93 (119)
T 1wfn_A 87 YTIEVAA 93 (119)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999854
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.1 Score=45.11 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=54.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..|++...+ .++..|+|..+.... .-.|+|...++ .+..+.. ... ..-...+.|.+|+||
T Consensus 107 ~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~~~--~~~------~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEAPL--LTL------KQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTSCC--EEE------CSCCCEEEECSCCTT
T ss_pred CCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chheeee--eee------cccceEEEeccCCCC
Confidence 568888888654 368999999874321 23567776543 1211110 010 112346778999999
Q ss_pred CEEEEEeCC----------CCCCceEEEECCCC
Q 017284 133 TKYYYKIGD----------GDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~----------~~~s~~~~F~T~p~ 155 (374)
|.|..||.. +.||+...|+|.|.
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 999999852 25788899999875
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.16 Score=45.09 Aligned_cols=97 Identities=13% Similarity=0.218 Sum_probs=57.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC-CCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN-ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~-~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+.... .+++.|+|.-.. ....-.|+|+......... .... ......+.|++|+|+|.|.+
T Consensus 16 ~~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 16 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT----TFRL------QPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCE----EEEE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCcE----EEEe------CCCCCEEEecCCCCCCEEEE
Confidence 578888877554 478999999875 2233467886543321111 0111 11233568999999999999
Q ss_pred EeCCC-----CCCceEEEECCCCCCCCCCcEEEEEec
Q 017284 138 KIGDG-----DSSREFWFQTPPKIHPDAPYTFGIIGD 169 (374)
Q Consensus 138 ~v~~~-----~~s~~~~F~T~p~~~~~~~~~f~v~gD 169 (374)
+|..- ..+....|+|+|.+ -..+++...++
T Consensus 84 ~V~a~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 84 SISAVRGTNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEECCCCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 98541 22345678887653 13444444443
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.1 Score=43.36 Aligned_cols=70 Identities=13% Similarity=0.252 Sum_probs=44.8
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
+..|..+.+.... .+++.|.|..+.... .-.|+|...++..+...... -...+++++|+|+
T Consensus 103 p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~~~L~p~ 168 (197)
T 3lpw_A 103 PLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATV------------KVTEATITGLIQG 168 (197)
T ss_dssp CCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEE------------SSSEEEECCCCTT
T ss_pred CCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeecc------------cccEEEeCCcCCC
Confidence 4678888876544 478999999764322 23567776554332221100 1223679999999
Q ss_pred CEEEEEeCC
Q 017284 133 TKYYYKIGD 141 (374)
Q Consensus 133 t~Y~Y~v~~ 141 (374)
|.|.++|..
T Consensus 169 t~Y~~~V~A 177 (197)
T 3lpw_A 169 EEYSFRVSA 177 (197)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.1 Score=44.21 Aligned_cols=71 Identities=15% Similarity=0.261 Sum_probs=42.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+... ..+++.|+|..+...+ .-.|+|....+ .+.... .. ......++|+||+|+|
T Consensus 110 P~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~----~~------~~~~~~~~i~~L~p~t 176 (209)
T 2vkw_A 110 PSAPKLEGQMGE--DGNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPEI----RL------PSGSDHVMLKSLDWNA 176 (209)
T ss_dssp CCCCEEEEEECT--TSSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCCE----EE------CTTCCEEEECSCCTTC
T ss_pred CCCCcccccccc--cCCeEEEEEECcccCCCCCceEEEEEECCCC-CCceee----ec------CCCccEEEecCCCCCC
Confidence 456776655433 3589999999873222 23577776222 221100 00 1112346799999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 177 ~Y~~~V~A 184 (209)
T 2vkw_A 177 EYEVYVVA 184 (209)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.05 E-value=0.063 Score=44.63 Aligned_cols=84 Identities=12% Similarity=0.165 Sum_probs=50.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+..-. .+++.|+|..+... ..-.|+|....+. .. .... ..-...++++||+|+|.|.+
T Consensus 8 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~-----~~~~------~~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGK-KN-----EMEI------PVDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCC-EE-----EEEE------CTTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEecC--CCEEEEEEeCCCCCccEEEEEEEeCCCC-ee-----EEEC------CCCCCEEEECCCCCCCEEEE
Confidence 578888777543 57899999976432 2345777643221 10 0111 01122457899999999999
Q ss_pred EeCC---CCC--CceEEEECCCCC
Q 017284 138 KIGD---GDS--SREFWFQTPPKI 156 (374)
Q Consensus 138 ~v~~---~~~--s~~~~F~T~p~~ 156 (374)
+|.. +.. +....++|.|.+
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCC
T ss_pred EEEEEcCCccCCCEEEEEECCCCC
Confidence 9853 222 235677887643
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=94.99 E-value=0.061 Score=48.08 Aligned_cols=81 Identities=19% Similarity=0.312 Sum_probs=48.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcC--C----CCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTP--N----ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~--~----~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.|.++.+.... .+++.|+|... . ....-.|+|....+.. .. ... ..-....+|+||+|+|
T Consensus 199 ~~p~~~~~~~~--~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~-----~~~------~~~~~~~~~~~L~p~t 264 (290)
T 3l5i_A 199 KGPTVRTKKVG--KNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TA-----VNV------DSSHTEYTLSSLTSDT 264 (290)
T ss_dssp SCCCEEEEEEC--SSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EE-----EEE------ETTCSEEEECSCCTTC
T ss_pred CCCeeeEeecc--CCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EE-----EEe------CCCceEEEeCCCCCCC
Confidence 33356654333 47899999832 1 1123357777654321 11 111 1112356899999999
Q ss_pred EEEEEeCC-----CCCCceEEEECCC
Q 017284 134 KYYYKIGD-----GDSSREFWFQTPP 154 (374)
Q Consensus 134 ~Y~Y~v~~-----~~~s~~~~F~T~p 154 (374)
.|.++|.. +..|....|+|+|
T Consensus 265 ~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 265 LYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEEEEeCCCCCCCCceEeecCC
Confidence 99999843 2367788999975
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.068 Score=45.11 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=42.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCC--CCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPN--ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~--~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.|.++.++.-....+++.|+|..+. ....-.|+|........... ... ..-...++|+||+|+|.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----ATI------PGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEE----EEE------CTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEE----Eec------CCCccEEEecCCCCCCEEEE
Confidence 3666666542212589999999863 12234677876543211110 011 01123578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 72 ~V~a 75 (201)
T 2ha1_A 72 QLIS 75 (201)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.078 Score=40.80 Aligned_cols=68 Identities=16% Similarity=0.364 Sum_probs=42.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+++.... +++.|+|.-+...+ .-.|+|..... .... ... ..-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~---~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~-----~~~------~~~~~~~~l~~L~p~t~ 83 (116)
T 2edb_A 19 DQPSSLHVRPQT---NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAET-----VRV------DSKQRYYSIERLESSSH 83 (116)
T ss_dssp CCCSCEEEEECS---SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEE-----EEE------ETTCCEEEECSCCSSSB
T ss_pred CCCCCeEEEECC---CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEE-----EEe------CCCeeEEEeCCCCCCCE
Confidence 468888877643 78999999874332 23567765321 1111 011 01123568999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 84 Y~~~V~A 90 (116)
T 2edb_A 84 YVISLKA 90 (116)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999853
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=94.87 E-value=0.056 Score=50.40 Aligned_cols=73 Identities=22% Similarity=0.378 Sum_probs=42.2
Q ss_pred CCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------C
Q 017284 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------G 142 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------~ 142 (374)
.+++.|+|.-+...+ .-.|+|.......+... . .. .+....++|++|+|+|.|.+||.. +
T Consensus 306 ~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-~---~~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s 375 (389)
T 2jll_A 306 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE-K---KV------QGNKDHIILEHLQWTMGYEVQITAANRLGYS 375 (389)
T ss_dssp TTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC-C---EE------CTTCCEEEECSCCTTCEEEEEEEEEC-CCBC
T ss_pred CCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE-e---ec------cCCcceEEeCCcCCCCEEEEEEEEEcCCcCC
Confidence 588999998654322 23566666432222110 0 00 112234678999999999999853 2
Q ss_pred CCCceEEEECCCCC
Q 017284 143 DSSREFWFQTPPKI 156 (374)
Q Consensus 143 ~~s~~~~F~T~p~~ 156 (374)
..| ...|+|+|.+
T Consensus 376 ~~s-~~~~~T~~~P 388 (389)
T 2jll_A 376 EPT-VYEFSMPPKP 388 (389)
T ss_dssp CCE-EEEEECCCCC
T ss_pred Cce-eeEecCCCCC
Confidence 334 4489998765
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.79 E-value=0.16 Score=37.33 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=50.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCC-CceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKY-DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
-.|.|+.++....-.++--|.|..+... ....+.|+...... ++.+. -.+....-+|+||+||-.|
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEE
Confidence 3566777775544468889999987532 23455666655421 21111 1223445579999999999
Q ss_pred EEEeCCC---CCCc--eEEEEC
Q 017284 136 YYKIGDG---DSSR--EFWFQT 152 (374)
Q Consensus 136 ~Y~v~~~---~~s~--~~~F~T 152 (374)
.=++-+- ++++ .+.|.|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 9998652 3443 566665
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=94.72 E-value=0.14 Score=47.51 Aligned_cols=72 Identities=14% Similarity=0.263 Sum_probs=44.9
Q ss_pred CCCceEEEEeeCCCCC-ceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGK-AVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~-~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|..|.+.... .+ ++.|+|..... ...-.|+|....+........ .. ..-...+.|++|+|+|.|
T Consensus 4 ~~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 4 SPPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEE---EE------ETTCCEEEECCCCTTCCE
T ss_pred CCCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeE---Ec------CCCccEEEEcCCcCCCEE
Confidence 467778777644 35 89999998742 233467787765422111111 10 112345679999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.++|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999854
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.62 E-value=0.2 Score=44.66 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=56.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
...|..+.+.... .+++.|+|..... ...-.|+|....+..... ... ......+.|+||+|+|.|.
T Consensus 113 ~~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~-----~~~------~~~~~~~~i~~L~p~t~Y~ 179 (290)
T 3r8q_A 113 VSPPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQ-----RTI------KPDVRSYTITGLQPGTDYK 179 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCCCEEEEEEEESSSCCCEE-----EEE------CTTCSEEEECSCCTTCEEE
T ss_pred CCCCceeEEEEcC--CCeEEEEEeCCCCcccEEEEEEEECCCCcceE-----Eec------CCCccEEEECCCCCCCEEE
Confidence 4578888877543 4789999998743 223467777655422111 010 1112346799999999999
Q ss_pred EEeCC---C--CCCceEEEECCCCCCCCCCcEEEEEe
Q 017284 137 YKIGD---G--DSSREFWFQTPPKIHPDAPYTFGIIG 168 (374)
Q Consensus 137 Y~v~~---~--~~s~~~~F~T~p~~~~~~~~~f~v~g 168 (374)
++|.. . .......+.|.|.+ -..+++...+
T Consensus 180 ~~V~A~n~~g~s~~~~~~~~t~p~~--P~~l~~~~~~ 214 (290)
T 3r8q_A 180 IYLYTLNDNARSSPVVIDASTAIDA--PSNLRFLATT 214 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEE
T ss_pred EEEEEEeCCcccCCEEEEecCCCCC--CCccEEEeeC
Confidence 99853 1 12234566776643 1244544343
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.3 Score=43.30 Aligned_cols=87 Identities=16% Similarity=0.184 Sum_probs=51.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.+.... .+++.|.|...... ..-.|+|....+...... ... ....-...+.+++|+|+|.|.+
T Consensus 106 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-----LVP---KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-----EEE---CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEE-----ECC---CCCcccceEEEecCCCCCEEEE
Confidence 567777776543 47899999987422 234677776654222111 100 0001155678999999999999
Q ss_pred EeCCC---CC--CceEEEECCCC
Q 017284 138 KIGDG---DS--SREFWFQTPPK 155 (374)
Q Consensus 138 ~v~~~---~~--s~~~~F~T~p~ 155 (374)
+|..- +. .....+.|.|.
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEeCCCCCcceEEEecCCCC
Confidence 98541 12 23445666554
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.31 Score=42.15 Aligned_cols=85 Identities=18% Similarity=0.278 Sum_probs=53.0
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
+..|..|++...+ ...++.|+|..+.... .-.|+|....+..+.... .. . . -...+.|.+|+||
T Consensus 122 p~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~---~~-~----~--~~~~~~l~~L~p~ 190 (227)
T 1eer_B 122 LDAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV---EI-L----E--GRTECVLSNLRGR 190 (227)
T ss_dssp CCCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE---EE-C----T--TCCEEEECCCCSS
T ss_pred cCcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE---EE-e----c--CceEEEEcccCCC
Confidence 3578888888643 1478999999875321 135677665443232110 00 0 1 1235678999999
Q ss_pred CEEEEEeCC-----------CCCCceEEEECC
Q 017284 133 TKYYYKIGD-----------GDSSREFWFQTP 153 (374)
Q Consensus 133 t~Y~Y~v~~-----------~~~s~~~~F~T~ 153 (374)
|.|..||.. +.||....|+|+
T Consensus 191 t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 191 TRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred CeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 999999852 257778889984
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.52 E-value=0.17 Score=42.72 Aligned_cols=83 Identities=14% Similarity=0.076 Sum_probs=49.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC--CC----CCceEEEeecCCCC-CceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN--EL----GSNRVQYGKLEKKY-DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~--~~----~~~~V~y~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
..|..+.+.... .+++.|+|.... .. ..-.|+|....... +.... . .......++|++|+|
T Consensus 106 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p 173 (205)
T 1cfb_A 106 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN----I------FDWRQNNIVIADQPT 173 (205)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE----E------CCTTCCEEEECSCCS
T ss_pred CCCeeeEeecCC--CCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE----e------cCCCccEEEEcCCCC
Confidence 457777766543 478999999764 11 12356777665432 11111 0 011124567899999
Q ss_pred CCEEEEEeCC------CC-CCceEEEECC
Q 017284 132 DTKYYYKIGD------GD-SSREFWFQTP 153 (374)
Q Consensus 132 ~t~Y~Y~v~~------~~-~s~~~~F~T~ 153 (374)
+|.|.+||.. +. +|....++|.
T Consensus 174 ~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 174 FVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp SCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 9999999853 23 3556666664
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.15 Score=43.14 Aligned_cols=70 Identities=19% Similarity=0.323 Sum_probs=43.7
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.|..+.+.... .+++.|+|..+.. ...-.|+|....+..... .... ..-...++|+||+|+|.|.+
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 183 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 183 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------CCCcCEEEECCCCCCCEEEE
Confidence 68888776443 4899999998742 123457777644321111 0010 11234568999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 184 ~V~A 187 (203)
T 2gee_A 184 SVSS 187 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.12 Score=47.91 Aligned_cols=73 Identities=14% Similarity=0.236 Sum_probs=44.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
..|..+.+....+ .+++.|+|..... ...-.|+|....+........ .. ......+++++|+|+|.|.
T Consensus 3 ~~P~~l~~~~~~~-~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---EE------CTTCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEecCC-CcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---Ee------cCCcCEEEECCCCCCCEEE
Confidence 4688888875432 2469999998642 223467777655422211110 01 1122457899999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
|||..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99863
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.064 Score=47.11 Aligned_cols=84 Identities=15% Similarity=0.266 Sum_probs=50.9
Q ss_pred CCCCceEEEEeeCCCC----CceEEEEEcCCCCC--------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEE
Q 017284 58 HNAPQQVRITQGDYDG----KAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCL 125 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~----~~~~v~W~t~~~~~--------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~ 125 (374)
+..|..|.++.-.... .++.|+|..+.... .-.|+|...++..+.... ......+.
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~ 198 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVP 198 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEE
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEE
Confidence 3568778655443211 34999999875321 124666665432222111 00123567
Q ss_pred eCCCCCCCEEEEEeCC--------CCCCceEEEECC
Q 017284 126 VDDLEYDTKYYYKIGD--------GDSSREFWFQTP 153 (374)
Q Consensus 126 l~gL~p~t~Y~Y~v~~--------~~~s~~~~F~T~ 153 (374)
|.+|+|||.|..||.. +.||+...|+|+
T Consensus 199 l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 199 VYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 8899999999999853 256777888875
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.042 Score=47.79 Aligned_cols=91 Identities=19% Similarity=0.342 Sum_probs=52.4
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+.... .+++.|+|..+.... .-.|+|....+..... +....... ........+|+||+|+|
T Consensus 99 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t 171 (234)
T 3f7q_A 99 PSEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQ 171 (234)
T ss_dssp CCCCCCCEEEECS--SSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTC
T ss_pred CCCCCccEEEEec--CCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCC
Confidence 3457777777543 478999999764322 2356777654432110 11111100 11122356899999999
Q ss_pred EEEEEeCC------CCCCc-eEEEECCCC
Q 017284 134 KYYYKIGD------GDSSR-EFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~-~~~F~T~p~ 155 (374)
.|.++|.. +..|. ...|+|.+.
T Consensus 172 ~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 172 PYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp CEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred eEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 99999853 23444 467778654
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.27 Score=42.38 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=47.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCC-ceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYD-SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..++.+--. .+++.++|..+... ...-.|..-.+... ..+.+..++ .+++||+|+|.|.|
T Consensus 152 ~Pp~NL~At~VT--~tSVtLsW~aP~~~-~GI~gY~ly~~g~~v~~v~~~~ts-------------yt~~gLk~~TeYsF 215 (238)
T 2w1n_A 152 NPVRDFKASEIN--KKNVTVTWTEPETT-EGLEGYILYKDGKKVAEIGKDETS-------------YTFKKLNRHTIYNF 215 (238)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCC-TTEEEEEEEETTEEEEEEETTCCE-------------EEECSCCTTCEEEE
T ss_pred CCCCceEEEEcc--CCeEEEEecCCCCC-CCceeEEEEeCCceeEEeeccceE-------------EEecCCCCCCEEEE
Confidence 567778877543 58999999998542 33445555433200 111111111 36899999999999
Q ss_pred EeCC----C--CCCceEEEECC
Q 017284 138 KIGD----G--DSSREFWFQTP 153 (374)
Q Consensus 138 ~v~~----~--~~s~~~~F~T~ 153 (374)
||.. | .......+||.
T Consensus 216 ~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 216 KIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEEETTSCBCCCEEEEEECC
T ss_pred EEEEEeCCCCccccCcEEEEec
Confidence 9953 2 22355566664
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.31 Score=37.88 Aligned_cols=69 Identities=12% Similarity=0.282 Sum_probs=42.8
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+++.... +++.|+|.-+...+ .-.|+|.... .... .... ..-....+|++|+|+|
T Consensus 28 P~~P~~l~~~~~~---~sv~l~W~~P~~~~g~i~~Y~v~y~~~~--~~~~----~~~~------~~~~~~~~i~~L~p~t 92 (126)
T 1x5i_A 28 PEVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGS--PHAQ----TIKV------DYKQRYYTIENLDPSS 92 (126)
T ss_dssp CCSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSC--GGGE----EEEC------CTTCCEEEECSCCSSC
T ss_pred CCCCCeeEEEecC---CEEEEEEcCCCCCCCCEeEEEEEEEcCC--CCce----EEEe------CCCeeEEEEeCCCCCC
Confidence 3578888887653 79999999875332 2246665321 1100 0110 1123456899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.++|..
T Consensus 93 ~Y~~~V~A 100 (126)
T 1x5i_A 93 HYVITLKA 100 (126)
T ss_dssp EECCEEEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=94.15 E-value=0.3 Score=44.68 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=52.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC--C----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL--G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
+..|..+.+.......+++.|+|..+... . .-.|+|.......+..+.- ......+.|.+|+|
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p 265 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWS 265 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCT
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCC
Confidence 35788888876543347899999987531 1 1257777765433322210 01123567999999
Q ss_pred CCEEEEEeCC------C---CCCceEEEEC
Q 017284 132 DTKYYYKIGD------G---DSSREFWFQT 152 (374)
Q Consensus 132 ~t~Y~Y~v~~------~---~~s~~~~F~T 152 (374)
+|.|..||.. + .||....++|
T Consensus 266 ~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 266 GLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp TCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 9999999853 2 3555555555
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.11 E-value=0.14 Score=43.33 Aligned_cols=78 Identities=23% Similarity=0.353 Sum_probs=41.4
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCC-CCCceEEeEEEEEEee--cccccEEEEEEeCCCCCCC
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEK-KYDSSAEGTVTNYTFY--KYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~-~~~~~~~g~~~~~~~~--~~~~~~~~~v~l~gL~p~t 133 (374)
|..+.+..-. .+++.|+|.-....+. -.|+|...+. ..+...... ..+... +....-...+++++|+|+|
T Consensus 5 P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t 81 (214)
T 2ibg_A 5 PTPPNVTRLS--DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQH 81 (214)
T ss_dssp CCCCEEEEEE--TTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCC-EECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred CCCCEeeEec--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccc-cCccccccccccCcceeEEecCCcCCC
Confidence 4444444332 4789999997754322 2466666433 222211110 110000 0001234567899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 82 ~Y~~~V~A 89 (214)
T 2ibg_A 82 TYRFRILA 89 (214)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.87 E-value=0.027 Score=42.65 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=43.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..++++.-. .+++.|+|...... ..-.|+|....+..... . .. ..+-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~------v~~~~~~~~l~~L~p~t~Y~~ 76 (105)
T 2ekj_A 9 SPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S-VS------VPGARSHVTLPDLQAATKYRV 76 (105)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C-BC------CBTTSSEEEECSCCSSCCCBC
T ss_pred CCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E-EE------eCCCcCEEEeCCCCCCCEEEE
Confidence 568888887544 48999999987422 23356676544321100 0 00 011124568999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 77 ~V~A 80 (105)
T 2ekj_A 77 LVSA 80 (105)
T ss_dssp BBCB
T ss_pred EEEE
Confidence 9864
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.65 E-value=0.3 Score=45.08 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=43.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
..|..+.+.... .+++.|+|.....+ ..-.|+|....+..... .... .+-....+++||+||+.|.+
T Consensus 277 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~~~~L~p~t~Y~~ 344 (368)
T 1fnf_A 277 DVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTV------PGSKSTATISGLKPGVDYTI 344 (368)
T ss_dssp CSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCE----EEEE------ETTCCEEEECSCCTTCCEEE
T ss_pred CCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccE----EEEc------CCCeeEEEecCCCCCCEEEE
Confidence 567777776543 47999999986432 23356777654321111 0011 01123568999999999999
Q ss_pred EeC
Q 017284 138 KIG 140 (374)
Q Consensus 138 ~v~ 140 (374)
+|.
T Consensus 345 ~V~ 347 (368)
T 1fnf_A 345 TVY 347 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=92.92 E-value=0.082 Score=39.50 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=36.7
Q ss_pred CCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 72 DGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 72 ~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
..+++.|+|...... ..-.|+|....+..... + ... .+-...++|+||+|||.|.-.|..
T Consensus 18 t~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~---~-~~v------~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 18 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ---Y-LDL------PSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp GGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE---E-EEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEECCCCCCccEEEEEEEeCCCCCcce---E-EEC------CCCccEEEECCCCCCCEEEEEEEE
Confidence 457899999876422 23467887765421110 0 000 112345789999999999988753
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.91 E-value=0.65 Score=47.32 Aligned_cols=94 Identities=17% Similarity=0.309 Sum_probs=51.1
Q ss_pred CCCCCceEEEEeeCCCCC---ceEEEEEcCCCCCC----ceEEEeec-CCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 57 GHNAPQQVRITQGDYDGK---AVIISWVTPNELGS----NRVQYGKL-EKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 57 ~~~~p~~v~lt~~~d~~~---~~~v~W~t~~~~~~----~~V~y~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
.+..|..+.++......+ ++.|+|.-+..... -.|+|... ....... ........ ..+-...++|+|
T Consensus 266 pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~----v~~~~~~~~l~~ 340 (680)
T 1zlg_A 266 APPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRKT----TDGFQNSVILEK 340 (680)
T ss_pred CCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEEE----EcCCeeEEEeCC
Confidence 346788888765411235 99999997642222 24666622 1100000 00000000 112345678999
Q ss_pred CCCCCEEEEEeCC------CCCCce---EEEECCCC
Q 017284 129 LEYDTKYYYKIGD------GDSSRE---FWFQTPPK 155 (374)
Q Consensus 129 L~p~t~Y~Y~v~~------~~~s~~---~~F~T~p~ 155 (374)
|+|+|.|.+||.. +..|.. ..++|.+.
T Consensus 341 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 341 LQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 9999999999853 223333 67888653
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.74 E-value=0.4 Score=36.81 Aligned_cols=80 Identities=18% Similarity=0.250 Sum_probs=47.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC--CCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN--ELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~--~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.. . .+++.|+|.-.. .... -.|.|+........ .+. ... ..+++. |+|+
T Consensus 20 ~~P~~v~~~~-~--~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-------~~~----~~~--~~~~~~-L~~~ 82 (117)
T 1wj3_A 20 QPPGNVVWNA-T--DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQ-------VLN----TNK--TSAELV-LPIK 82 (117)
T ss_dssp CCCCSCBCCE-E--TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCE-------EEE----ESS--SEEEEE-CCCS
T ss_pred CCCccEEEEE-e--CCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCe-------EEe----CCC--cEEEEE-CCCC
Confidence 3566666554 2 478999998762 2222 24566655432221 111 011 245666 9999
Q ss_pred CEEEEEeC------CCCCCceEEEECCCC
Q 017284 133 TKYYYKIG------DGDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~------~~~~s~~~~F~T~p~ 155 (374)
|.|.+||. .+..|+...|+|...
T Consensus 83 t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 83 EDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp SCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999984 345677888998753
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.58 E-value=0.45 Score=41.06 Aligned_cols=86 Identities=20% Similarity=0.185 Sum_probs=53.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC---------CCceEEEeecCCCCCceE-EeEEEEEEeecccccEEEEEEeCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL---------GSNRVQYGKLEKKYDSSA-EGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~---------~~~~V~y~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
..|..+.+.. .....|+|..+... -.-.|+|...++ .+..+ .+. ... .......+.+.+
T Consensus 102 ~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~--~~~----~~~~~~~~~~~~ 170 (219)
T 3tgx_A 102 APPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRK--LIS----VDSRSVSLLPLE 170 (219)
T ss_dssp CCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEE--EEC----SSCSEEEECTTS
T ss_pred CCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceecccce--eEe----cCCCEEEEEecc
Confidence 5677777763 35899999987421 123577777653 22211 111 100 112345677899
Q ss_pred CCCCCEEEEEeCC---------C---CCCceEEEECCCC
Q 017284 129 LEYDTKYYYKIGD---------G---DSSREFWFQTPPK 155 (374)
Q Consensus 129 L~p~t~Y~Y~v~~---------~---~~s~~~~F~T~p~ 155 (374)
|+|||.|..||.. | .||+...|+|++.
T Consensus 171 L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 171 FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 9999999999842 2 4688899999875
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=92.30 E-value=1.6 Score=40.29 Aligned_cols=84 Identities=23% Similarity=0.333 Sum_probs=50.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.+.... .+++.|.|..+... +.+ .|+|...+...+.... .........|.+|+|++
T Consensus 197 ~~P~~~~~~~~~--~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~ 263 (389)
T 2jll_A 197 SSPYGVKIIELS--QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNT 263 (389)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTC
T ss_pred CCCcceEEeecc--CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCC
Confidence 456666655443 47899999864322 222 4666665543332111 01122356789999999
Q ss_pred EEEEEeCC------CCCCceEEEECCCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.|.|+|.. +..|....++|.+.
T Consensus 264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 264 TYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 99999843 24566778888664
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=92.00 E-value=0.18 Score=50.85 Aligned_cols=93 Identities=23% Similarity=0.454 Sum_probs=50.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEE----EE--------eeccc------ccE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTN----YT--------FYKYK------SGY 120 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~----~~--------~~~~~------~~~ 120 (374)
.+|..|.+--.....++++|.|..++. ......|..--+. +..++... ++ +...+ .-.
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAG---KLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIV 111 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETT---EEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCC
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECC---EEeEeeccccccccccccccccccccccccccceee
Confidence 467777663222235889999998854 3444555543221 01111100 00 00000 002
Q ss_pred EEEEEeCCCCCCCEEEEEeCC----C---CCCceEEEECCCC
Q 017284 121 IHHCLVDDLEYDTKYYYKIGD----G---DSSREFWFQTPPK 155 (374)
Q Consensus 121 ~~~v~l~gL~p~t~Y~Y~v~~----~---~~s~~~~F~T~p~ 155 (374)
.++.++++|+|+|+|.|++.. + ..++....+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 457788999999999999954 2 2345566777654
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.73 E-value=0.15 Score=50.56 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=54.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+...+...+++.|+|..+.... .-.|+|...++..+...... ........+.+++|+|+|
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 356777887644334689999999764322 23567776654333221100 001123456799999999
Q ss_pred EEEEEeCC------C---CCCceEEEECCCC
Q 017284 134 KYYYKIGD------G---DSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~------~---~~s~~~~F~T~p~ 155 (374)
.|.+||.. + .||....++|++.
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 99999853 2 2466777787653
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.37 E-value=0.89 Score=40.04 Aligned_cols=84 Identities=12% Similarity=0.180 Sum_probs=52.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC--CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~--~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+..|..|+++... ...+.|+|..+.... .-.|+|....+..+..... . ......|.+|+|++.|
T Consensus 137 P~PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~----------~--~~~~~~l~~L~p~~~Y 202 (247)
T 2erj_C 137 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV----------D--YRHKFSLPSVDGQKRY 202 (247)
T ss_dssp CCCCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE----------C--SSCEEEESCCCTTSCE
T ss_pred eCCCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec----------C--CceEEEecCCCCCCEE
Confidence 3567778887654 268999999974211 1247787765544433211 0 1224568999999999
Q ss_pred EEEeCC---------C---CCCceEEEECCCC
Q 017284 136 YYKIGD---------G---DSSREFWFQTPPK 155 (374)
Q Consensus 136 ~Y~v~~---------~---~~s~~~~F~T~p~ 155 (374)
..||.. + .||+...|.|.+.
T Consensus 203 ~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 203 TFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 999842 1 4677778887643
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=91.28 E-value=0.82 Score=45.66 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=45.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC-CC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE-LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~-~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.|....++--. .++++++|..+.. .+ .-.||+...++..|..+. .+ . .. ..+++||+||+.
T Consensus 12 pP~~P~v~~~~--~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---~----~t----~~~V~~L~~g~~ 77 (573)
T 3uto_A 12 PPRFPIIENIL--DEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---R----YT----YTTIEGLRAGKQ 77 (573)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---S----SS----EEEECCCCTTCE
T ss_pred cCCCCEEEEee--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---c----CC----EEEeCCCCCCCc
Confidence 45555555433 4899999998732 22 236788888877776553 21 0 11 257899999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 78 Y~FRV~A 84 (573)
T 3uto_A 78 YEFRIIA 84 (573)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 9999853
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.11 E-value=0.98 Score=41.66 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=49.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.|..+.+.... .+++.|+|..+.. ...-.|+|....+...... ... ..-....++++|+|++.|.+
T Consensus 189 ~p~~l~~~~~~--~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 256 (375)
T 3t1w_A 189 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LSI------SPSDNAVVLTNLLPGTEYVV 256 (375)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEE----EEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCceeEEEecc--cCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEE----EEc------CCCcCEEEeCCCCCCCEEEE
Confidence 67777766433 5899999998632 1234677776543211110 010 11124567999999999999
Q ss_pred EeCC---C--CCCceEEEECCCC
Q 017284 138 KIGD---G--DSSREFWFQTPPK 155 (374)
Q Consensus 138 ~v~~---~--~~s~~~~F~T~p~ 155 (374)
+|.. . +......++|.|.
T Consensus 257 ~V~A~~~~g~s~~~~~~~~t~p~ 279 (375)
T 3t1w_A 257 SVSSVYEQHESTPLRGRQKTGLD 279 (375)
T ss_dssp EEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEcCCCcCCceeeEEecCCC
Confidence 9853 1 1223445677664
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=90.91 E-value=0.47 Score=46.44 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=55.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..|.+.... .+++.|+|..+..... -.|+|...++..+.. . .... . ...-.+.+.|.+|+|+|
T Consensus 387 P~PP~nl~v~~~s--~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~---~~~~--~-~~~~~~~v~l~~L~P~T 457 (488)
T 2q7n_A 387 PHDPTSLKVKDIN--STVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-N---ATIR--G-AEDSTYHVAVDKLNPYT 457 (488)
T ss_dssp CCCCEEEEEEECS--TTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-E---EEEE--C-CEEEEEEEEECSCCSSC
T ss_pred CCCCeEEEEEecC--CCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-E---EEEe--c-CCCcEEEEEeCCCCCCc
Confidence 3578877776533 5789999998743322 246666654321110 0 0110 0 01235667999999999
Q ss_pred EEEEEeC-----C---CCCCceEEEECCCC
Q 017284 134 KYYYKIG-----D---GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~-----~---~~~s~~~~F~T~p~ 155 (374)
.|..||. . +.||+...|+|++.
T Consensus 458 ~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 458 AYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp CBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred eEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 9999984 2 25677788888763
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=90.80 E-value=0.28 Score=47.42 Aligned_cols=71 Identities=14% Similarity=0.269 Sum_probs=44.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
..|..++++-.. .++++|+|..+.. ...-.|.|........ ...+.. ..-..+++|+||+|||.|.
T Consensus 371 ~~~~~l~~~~~~--~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~~~~~------~~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 371 SVPTNLEVVAAT--PTSLLISWDASYSSSVSYYRITYGETGGNSP----VQEFTV------PGSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CSSCCCEEEEEC--SSCEEEECCCTTGGGCSEEEEEEEETTCCSC----CEEEEE------ETTCCEEEECSCCTTCEEE
T ss_pred CCCcceEEeccC--CCeEEEEecCCCCCcceEEEEEEEECCCCcc----ceEEEe------cCCCceEEecCCCCCCEEE
Confidence 457788888665 4789999987621 1133566766542110 011111 1123568999999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.46 E-value=0.71 Score=39.21 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=40.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCC-CCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+++.... ..+++.|+|..+.... .-.|+|...++ ..+..+.- ...-...+.|.+|+|||.
T Consensus 111 ~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 111 LPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTSC
T ss_pred CCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCCE
Confidence 567778777653 2579999999874332 23467776542 22222110 011123578999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999853
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.34 E-value=1.2 Score=37.53 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=47.2
Q ss_pred eEEEEeeCCCCCceEEEEEcCCCCC--------------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 63 QVRITQGDYDGKAVIISWVTPNELG--------------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 63 ~v~lt~~~d~~~~~~v~W~t~~~~~--------------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
.|.+...+ +++.|.|..+..+. .-.|.|...+........ . . ...++|++
T Consensus 98 ~v~~~~~~---~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~----~---~~~~~l~~ 161 (201)
T 3lqm_A 98 GMQVEVLA---DCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P----Q---YDFEVLRN 161 (201)
T ss_dssp EEEEEEET---TEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C----S---SSEEEECS
T ss_pred EEEEEEeC---CEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e----c---CceEEEec
Confidence 57776543 68999998863211 224555554332211110 0 1 12378999
Q ss_pred CCCCCEEEEEeCC--------CCCCceEEEECCCC
Q 017284 129 LEYDTKYYYKIGD--------GDSSREFWFQTPPK 155 (374)
Q Consensus 129 L~p~t~Y~Y~v~~--------~~~s~~~~F~T~p~ 155 (374)
|+|+|.|..+|.. +.+|+..-|+|.+.
T Consensus 162 L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 162 LEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred CCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999852 34677788888764
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=90.29 E-value=3 Score=36.70 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=42.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.|..+.+...+ +++.|+|..... ...-.|+|........... ..... .........+++|+|+|.|.++
T Consensus 104 p~~~~~~~~~~---~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 104 PVMDLKAFPKD---NMLWVEWTTPRESVKKYILEWCVLSDKAPCIT--DWQQE-----DGTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCEEEEEEEET---TEEEEEEECCSSCCCEEEEEEEEECSSSCCCC--EEEEE-----ETTCSEEECCSCCCTTCEEEEE
T ss_pred ccceeEEEeCC---CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCc--CeEEc-----cCCCcceEEecCcCCccEEEEE
Confidence 45556665543 589999998754 2334677776654321000 00000 0112345678999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=90.26 E-value=1.5 Score=37.25 Aligned_cols=88 Identities=10% Similarity=0.081 Sum_probs=46.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC---C----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL---G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~---~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
+..|..|.++... .....|+|..+... . .-.|+|+...+. +....... ........+.+.+|.
T Consensus 98 p~PP~nl~~~~~~--~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~L~ 167 (207)
T 1iar_B 98 PRAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDP-ADFRIYNV-------TYLEPSLRIAASTLK 167 (207)
T ss_dssp CCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSC-SCEEEEEE-------CSSCCEEEECC----
T ss_pred cCCCCCeEEEEcc--CCCEEEEECCCCCccccccccEEEEEEEccCCCc-hhheeeee-------ecCCcEEEEEHHHCC
Confidence 3678888887533 35799999987421 1 135778776542 21111100 012245556778999
Q ss_pred CCCEEEEEeCC------C---CCCceEEEECCCC
Q 017284 131 YDTKYYYKIGD------G---DSSREFWFQTPPK 155 (374)
Q Consensus 131 p~t~Y~Y~v~~------~---~~s~~~~F~T~p~ 155 (374)
||+.|.-||.. | .||....|+|.++
T Consensus 168 p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 168 SGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp -CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 99999999863 3 5778889999764
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.16 E-value=3.7 Score=37.05 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=46.0
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC-----------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG-----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
.|. |.+...+ +++.|+|. +.... .-.|.|+..++.......+ -...++|++
T Consensus 104 pP~-v~~~~~~---~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~ 165 (306)
T 3s98_A 104 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 165 (306)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECS
T ss_pred CCe-EEEEEcC---CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEcc
Confidence 454 7777543 57999999 42211 1145666655432211111 113578999
Q ss_pred CCCCCEEEEEeCC--------CCCCceEEEECCC
Q 017284 129 LEYDTKYYYKIGD--------GDSSREFWFQTPP 154 (374)
Q Consensus 129 L~p~t~Y~Y~v~~--------~~~s~~~~F~T~p 154 (374)
|+|+|.|..+|.. |..|+...++|..
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 9999999999842 3467777788753
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=89.72 E-value=1.3 Score=43.90 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=50.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCC-ceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYD-SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
.+|..+.... ..++++|+|..+...+ .-.|+|........ ...-+....+... ........++|++|+|+
T Consensus 335 saP~nl~~~v---s~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 335 SAPHYLTAVG---MGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-PHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCBSCEEEEC---CTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-SSSBCSSEEEEECCCTT
T ss_pred CcccceEEEe---cCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-ecCCccceeEeCCCCCC
Confidence 5787775433 2579999999765432 12466665322100 0000000111100 01112346789999999
Q ss_pred CEEEEEeCC----C-----CCCceEEEECCCC
Q 017284 133 TKYYYKIGD----G-----DSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~----~-----~~s~~~~F~T~p~ 155 (374)
|.|.+||.. + ..+....++|.|.
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 999999843 1 1345677888764
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.71 E-value=0.27 Score=48.06 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=55.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+.... .+++.|+|..+.... .-.|+|....+..... .+... ....-.+.+.|.+|+|+|
T Consensus 382 P~PP~nl~v~~~~--stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 382 PHTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYT 452 (483)
T ss_dssp CCCCEEEEECCSS--SSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSS
T ss_pred CCCCeeeEEEEec--CCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCc
Confidence 3578777776432 578999999874322 3468888765432111 11100 001123456799999999
Q ss_pred EEEEEeCC--------CCCCceEEEECCCC
Q 017284 134 KYYYKIGD--------GDSSREFWFQTPPK 155 (374)
Q Consensus 134 ~Y~Y~v~~--------~~~s~~~~F~T~p~ 155 (374)
.|..||.. +.||+...|+|+++
T Consensus 453 ~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 453 LYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 99999853 24677788888653
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=89.53 E-value=1.8 Score=39.08 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=43.7
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeE---EEEEEeecccccEEEEEEeCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGT---VTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
+..|..+++... .+++.|+|..+..... -.|+|....+..+...... ...... .........+.|.+|+
T Consensus 200 P~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~-~~~~~~~~~~~l~~L~ 275 (314)
T 3bpo_C 200 PDPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEF-ERNVENTSCFMVPGVL 275 (314)
T ss_dssp CCCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTS-SCCCSSEEEEEEESCC
T ss_pred eCCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccccccccc-ccccCCceEEEEccCC
Confidence 357888888743 3689999998853222 2466766544322111000 000000 0001234567899999
Q ss_pred CCCEEEEEeC
Q 017284 131 YDTKYYYKIG 140 (374)
Q Consensus 131 p~t~Y~Y~v~ 140 (374)
|+|.|..||.
T Consensus 276 p~t~Y~~qVr 285 (314)
T 3bpo_C 276 PDTLNTVRIR 285 (314)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999999984
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.40 E-value=1.3 Score=37.27 Aligned_cols=82 Identities=12% Similarity=0.176 Sum_probs=50.7
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC--CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~--~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+..|..|+++...+ ..+.|+|..+.... .-.|+|....+..+..... . ......|.+|+|++.|
T Consensus 99 P~pP~~l~~~~~~~--~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~----------~--~~~~~~l~~l~p~~~Y 164 (199)
T 2b5i_C 99 PWAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV----------D--YRHKFSLPSVDGQKRY 164 (199)
T ss_dssp CCCCEEEEEEEEET--TEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE----------C--SSCEEEECSCCTTSCE
T ss_pred cCCCcEEEEEECCC--CCEEEEECCCCCCCceEEEEEEeecCCcccEEEec----------c--CceEEEecCCCCCcEE
Confidence 35788888886543 68999999874211 2358888765544432210 0 1234578999999999
Q ss_pred EEEeCC---------C---CCCceEEEECC
Q 017284 136 YYKIGD---------G---DSSREFWFQTP 153 (374)
Q Consensus 136 ~Y~v~~---------~---~~s~~~~F~T~ 153 (374)
..||.. + .||....|.|.
T Consensus 165 ~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 165 TFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 999852 1 35666666664
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=89.14 E-value=4.6 Score=38.11 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=57.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCC----------ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----------NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----------~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~ 127 (374)
+..|..|.++..+ +.+.|+|..+..... -.|+|+... ..+..+... . .....+.+.+.
T Consensus 109 p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~-~-------~~~~~~~~~~~ 176 (419)
T 2gys_A 109 PPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL-L-------SNTSQATLGPE 176 (419)
T ss_dssp CCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE-E-------ESSSEEEECTT
T ss_pred CCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee-c-------ccceEEEechh
Confidence 3568888887654 489999998753211 246666654 222222110 0 01123334445
Q ss_pred CCCCCCEEEEEeCC---------C---CCCceEEEECCCCCCCCCCcEEEEEec
Q 017284 128 DLEYDTKYYYKIGD---------G---DSSREFWFQTPPKIHPDAPYTFGIIGD 169 (374)
Q Consensus 128 gL~p~t~Y~Y~v~~---------~---~~s~~~~F~T~p~~~~~~~~~f~v~gD 169 (374)
+|.|++.|..||.. | .||+...|+|++.. +..+-.+-...+
T Consensus 177 ~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 177 HLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp TCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred hcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 99999999999842 2 35678899998765 334444444433
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.74 E-value=2.1 Score=43.49 Aligned_cols=68 Identities=12% Similarity=0.110 Sum_probs=40.0
Q ss_pred CCC-ceEEEEeeCCCCCceEEEEEcCCCC-C---CceEEEeecCC--------CCCceEEeEEEEEEeecccccEEEEEE
Q 017284 59 NAP-QQVRITQGDYDGKAVIISWVTPNEL-G---SNRVQYGKLEK--------KYDSSAEGTVTNYTFYKYKSGYIHHCL 125 (374)
Q Consensus 59 ~~p-~~v~lt~~~d~~~~~~v~W~t~~~~-~---~~~V~y~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~v~ 125 (374)
..| ..+.++-. ..+++.|.|...... . .-.|+|....+ ..+..+.. .....++
T Consensus 161 ~~P~~~l~v~~~--~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~ 226 (680)
T 1zlg_A 161 LKPRKELRFTEL--QSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQ 226 (680)
T ss_pred ccccccceEEec--cCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEE
Confidence 456 56666543 358899999976321 1 13566665422 11111111 0123467
Q ss_pred eCCCCCCCEEEEEeC
Q 017284 126 VDDLEYDTKYYYKIG 140 (374)
Q Consensus 126 l~gL~p~t~Y~Y~v~ 140 (374)
|++|+|+|.|.|||.
T Consensus 227 i~~L~P~t~Y~frV~ 241 (680)
T 1zlg_A 227 LTDIRPSRWYQFRVA 241 (680)
T ss_pred eCCCCCCCEEEEEEE
Confidence 999999999999985
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.96 E-value=0.73 Score=38.50 Aligned_cols=60 Identities=18% Similarity=0.303 Sum_probs=35.4
Q ss_pred CCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 72 DGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 72 ~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
..+++.|+|..+... ..-.|+|....+..... . ... .+-...+.|+||+|+|.|.++|..
T Consensus 124 ~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-~---~~v------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 124 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ-Y---LDL------PSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE-E---EEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEEeCCCCCccEEEEEEEECCCCCcee-E---EEc------CCceeEEEeCCCCCCCEEEEEEEE
Confidence 357899999876321 12356776543222111 0 111 112345789999999999999864
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.77 E-value=3.1 Score=35.73 Aligned_cols=80 Identities=16% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-----C------------CceEEEeecCCCCCceEEeEEEEEEeecccccEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----G------------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYI 121 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-----~------------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 121 (374)
..|+ |.++.. .+++.|.|.-+..+ + .-.|.|+..++.. .... . .. .
T Consensus 110 gPP~-v~v~~~---~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~--~~~~---~------~~--~ 172 (221)
T 4doh_R 110 GPPE-VALTTD---EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR--TWSQ---C------VT--N 172 (221)
T ss_dssp CCCE-EEEECC---SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE--EEEE---E------EC--S
T ss_pred CCCE-EEEEEC---CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc--EEEE---e------ec--C
Confidence 3465 888854 36899999976432 1 1256666654321 1110 0 01 1
Q ss_pred EEEEeCCCCCCCEEEEEeCC--------CCCCceEEEECCCC
Q 017284 122 HHCLVDDLEYDTKYYYKIGD--------GDSSREFWFQTPPK 155 (374)
Q Consensus 122 ~~v~l~gL~p~t~Y~Y~v~~--------~~~s~~~~F~T~p~ 155 (374)
+.++|.+|+|+|.|..+|.. +.+|+..-|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 35789999999999999842 35678888998764
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=87.57 E-value=4.3 Score=38.23 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=45.4
Q ss_pred eEEEEeeCCCCCceEEEEEcCCCCC-----------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 63 QVRITQGDYDGKAVIISWVTPNELG-----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 63 ~v~lt~~~d~~~~~~v~W~t~~~~~-----------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
.|.+.... +++.|+|. +.... .-.|.|+..++.......+ -...++|++|+|
T Consensus 110 ~v~~~~~~---~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~L~p 172 (414)
T 3se4_A 110 EVHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSP 172 (414)
T ss_dssp EEEEEECS---SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECCCCT
T ss_pred eEEEEEcC---CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcCCCC
Confidence 37766543 58999999 64221 1246777665432211111 123478999999
Q ss_pred CCEEEEEeCC--------CCCCceEEEECCC
Q 017284 132 DTKYYYKIGD--------GDSSREFWFQTPP 154 (374)
Q Consensus 132 ~t~Y~Y~v~~--------~~~s~~~~F~T~p 154 (374)
+|.|..+|.. +..|+...++|..
T Consensus 173 ~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 173 ETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp TCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred CCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 9999999853 1245556677753
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.47 E-value=0.27 Score=34.98 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=21.2
Q ss_pred EeCCCCCCCEEEEEeCC---CCC--CceEEEECCC
Q 017284 125 LVDDLEYDTKYYYKIGD---GDS--SREFWFQTPP 154 (374)
Q Consensus 125 ~l~gL~p~t~Y~Y~v~~---~~~--s~~~~F~T~p 154 (374)
+|.||+||++|.=++-+ .+. ...+.|+|--
T Consensus 41 tIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 41 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp CCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred EEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 69999999999988643 222 3456776643
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=86.18 E-value=1.4 Score=37.01 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=43.1
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCC-CCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL-EYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL-~p~t 133 (374)
+.+|..+.....+ .++++++|....... .-.|+|....+... .... ...-...+.|++| +|+|
T Consensus 8 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~~------~~~~~~~~~i~~L~~~~t 74 (215)
T 1bqu_A 8 PEKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCKA------KRDTPTSCTVDYSTVYFV 74 (215)
T ss_dssp CCCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEEC------CSSCTTEEECSSCCCTTS
T ss_pred CCCCEeeEeEECC--CCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----cccc------ccCCcceEEEcCCccccc
Confidence 3578888776544 378999999875432 23455554322110 0000 0112345789999 9999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 75 ~Y~~~V~A 82 (215)
T 1bqu_A 75 NIEVWVEA 82 (215)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 99999864
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.03 E-value=3.4 Score=35.56 Aligned_cols=30 Identities=17% Similarity=0.342 Sum_probs=19.7
Q ss_pred EeCCCCCCCEEEEEeCC------CCCCceEEEECCC
Q 017284 125 LVDDLEYDTKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 125 ~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
.+.+|+|++.|.+||.. |..|++..+++++
T Consensus 166 ~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 166 AHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp BCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eeecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 35689999999999843 3355555555544
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.97 E-value=2 Score=36.50 Aligned_cols=79 Identities=14% Similarity=0.038 Sum_probs=47.0
Q ss_pred eEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC-
Q 017284 63 QVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD- 141 (374)
Q Consensus 63 ~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~- 141 (374)
.+.++.. ..++.|.|..+...-.-.|.|+..+....... .... . ....++|.+|+|+|.|..+|..
T Consensus 114 ~v~v~~~---~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~----~~~~----~--~~~~~~i~~L~p~t~Ycv~Vra~ 180 (206)
T 4doh_B 114 GMEITKD---GFHLVIELEDLGPQFEFLVAYWRREPGAEEHV----KMVR----S--GGIPVHLETMEPGAAYCVKAQTF 180 (206)
T ss_dssp CEEEEEE---TTEEEEEECCCCTTCEEEEEEEESSSSCCCEE----EEEC----C--SSSEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeC---CCEEEEEecCCCCcEEEEEEEEEcCCCceeEE----eEEc----c--CCeEEEEeCCCCCCcEEEEEEEE
Confidence 3778743 47899999865222244677877654332111 1110 0 1234789999999999999853
Q ss_pred -------CCCCceEEEECCC
Q 017284 142 -------GDSSREFWFQTPP 154 (374)
Q Consensus 142 -------~~~s~~~~F~T~p 154 (374)
+..|+..-|+|..
T Consensus 181 ~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 181 VKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EGGGTEECCCCCCEEECC--
T ss_pred ecCCCCCCCCCCCEeEEccc
Confidence 2456666677643
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.54 E-value=1.7 Score=44.42 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=52.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC------CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~------~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+.... .+++.|+|...... ..-.|+|....+........ .... .......++|++|+|+
T Consensus 361 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~--~~~~----~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 361 RGPRKLEVVEVK--SRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREE--VSWD----TENSHPQHTITNLSPY 432 (731)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEE--EECC----SSCSSCEEEECSCCSS
T ss_pred CCCceeEEEecc--CCeEEEEEECCCcccccceeeeEEEEEEEccCCCCcccee--EEEE----ecCCcceEEECCCCCC
Confidence 568888776544 47899999986311 12357787665322111100 0000 1112345689999999
Q ss_pred CEEEEEeCC----C-CCCceEEEECCC
Q 017284 133 TKYYYKIGD----G-DSSREFWFQTPP 154 (374)
Q Consensus 133 t~Y~Y~v~~----~-~~s~~~~F~T~p 154 (374)
|.|.+||.. | +.|....++|.+
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 999999853 1 236677888864
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.60 E-value=4.8 Score=35.42 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=39.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..+.++.. ..+++.|+|..+... ... .|+|.......+...... ......|.+|+|++
T Consensus 200 ~~p~~~~~~~~--~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~------------~~~~~~i~~l~~~~ 265 (305)
T 2nzi_A 200 DPPRGVKVSDV--SRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA------------RETRYTVINLFGKT 265 (305)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE------------SSSEEEECSCCSSC
T ss_pred CCCCCceeeec--cCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc------------cCceEEecCCCCCC
Confidence 45555555432 357899999964222 222 344444433222221111 12346799999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.|||..
T Consensus 266 ~y~~~~~A 273 (305)
T 2nzi_A 266 SYQFRVIA 273 (305)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999954
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 374 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 4e-52 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 5e-47 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 3e-43 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 3e-10 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-06 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 1e-04 | |
| d1x5ka1 | 111 | b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [ | 6e-04 | |
| d1wf5a1 | 108 | b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) | 7e-04 | |
| d1uena_ | 125 | b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens | 0.001 | |
| d1wfta_ | 123 | b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus | 0.004 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 173 bits (440), Expect = 4e-52
Identities = 135/215 (62%), Positives = 169/215 (78%), Gaps = 3/215 (1%)
Query: 155 KIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ--SVLFLGDLSYADRYEYNDVGIRW 212
+ D PYTFG+IGDLGQ+++S +TL HY S + +VLF+GDLSYADRY +D +RW
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 59
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA 272
D+WGRF E+S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+
Sbjct: 60 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 119
Query: 273 IRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332
I+RASAHIIVLSSYS Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+ME
Sbjct: 120 IKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 179
Query: 333 GESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS 367
GE+MR FE+WFV +VD +FAGHVHAYERS R+S
Sbjct: 180 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 214
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 153 bits (389), Expect = 5e-47
Identities = 55/111 (49%), Positives = 78/111 (70%)
Query: 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSS 103
D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 104 AEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 144 bits (364), Expect = 3e-43
Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 42 SADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKY 100
D+P + VF +P G+NAPQQV ITQGDY+G+ VIISW TP ++ G+N+V Y K
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKS 65
Query: 101 DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
A GTV Y +Y Y S +IHHC + DLEYDTKYYY++G GD+ R+FWF TPP
Sbjct: 66 QKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 58.3 bits (139), Expect = 3e-10
Identities = 34/240 (14%), Positives = 61/240 (25%), Gaps = 30/240 (12%)
Query: 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS-----------VLFLGDLSYADRYEYN 206
P F +GD G N+ M + +L LGD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 207 DVGIRWDSWGRFIEQSAAYQ-PWIWSAGNHEIEFMPNMGE---------VIPFKSYLHRI 256
+++ + PW AGNH+ + P Y R
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF 120
Query: 257 ATPYTASKST----NPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312
P + + + Q W++++L K
Sbjct: 121 KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKED 177
Query: 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHF 372
+++V H P++S + + +V GH H + +
Sbjct: 178 YVLVAGHYPVWSIA--EHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFV 235
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 46.3 bits (108), Expect = 3e-06
Identities = 24/156 (15%), Positives = 41/156 (26%), Gaps = 3/156 (1%)
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI--PFKSYLHRIATPYTASKSTNPLW 270
D+ I + + + VI +S H + + N
Sbjct: 119 DTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQD 178
Query: 271 YAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY 330
+ S + Q WL L D ++ ++ H+P++
Sbjct: 179 LNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPI 237
Query: 331 MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366
+ AV H V AGH H R
Sbjct: 238 CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDS 273
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 15/183 (8%), Positives = 42/183 (22%), Gaps = 13/183 (7%)
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
+K +G ++ +G+L D F S A+ P + G +
Sbjct: 25 VKLAPDTGADAIALIGNL-------MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPI 77
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
+ E + + + + + W+
Sbjct: 78 WEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH--EALRYPAWV 135
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
E K E + + + + ++ + + ++ +
Sbjct: 136 AEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTH----NPLLVLVAGKGQ 191
Query: 360 YER 362
Sbjct: 192 KHE 194
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 6e-04
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
P+ V + + K +I++W P+E Y ++ G
Sbjct: 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV----VG 69
Query: 120 YIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPP 154
+ +L DT YY+KI G G S F+TP
Sbjct: 70 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 7e-04
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 50 KVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVT 109
+V +P +AP+ T + +A+ ++W P + S + LE +++
Sbjct: 6 RVRQLP---HAPEHPVATLSTVERRAINLTWTKPFDGNSP-LIRYILEMSENNA-----P 56
Query: 110 NYTFYKYKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPP 154
V L Y +++ G G S++ + P
Sbjct: 57 WTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.001
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 13/117 (11%)
Query: 53 DIPKGHNAPQQVRITQGDYDGKAVIISW-VTPNELGSNRVQYGKLEKKYDSSAEGTVTNY 111
D+P AP VR+ + + W P + +Q ++ S+ +
Sbjct: 12 DLPMV--APGNVRVN--VVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH 67
Query: 112 TFYKYK--SGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
K G H ++ LE + Y + G+G +S + F TP P +
Sbjct: 68 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSS 124
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 34.6 bits (78), Expect = 0.004
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 18/114 (15%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
AP VRI++ + +SW P N ++Y + + + F + G
Sbjct: 10 APSTVRISKNVD---GIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCG 66
Query: 120 YIHHC---------LVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHP 158
C D ++I G G +++ W Q K P
Sbjct: 67 LKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGP 120
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 374 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.96 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.96 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.94 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.65 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.61 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.04 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.97 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.77 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.75 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.72 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.66 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.6 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.45 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.23 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.9 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 97.89 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.83 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.81 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.73 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.72 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.66 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.64 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.64 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.64 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.58 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.55 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.53 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.5 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.5 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.48 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 97.46 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.45 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.44 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.42 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.41 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.38 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 97.36 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.35 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.31 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.31 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.29 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 97.21 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.2 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.19 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.18 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.17 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.16 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 97.15 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.13 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 97.11 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.1 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.1 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.09 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 97.08 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.07 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.05 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 97.05 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.05 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.04 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.02 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 97.01 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.97 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.93 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.91 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.88 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.88 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.87 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.86 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.85 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.83 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.74 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.73 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.71 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.7 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.69 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.68 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.47 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.45 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.41 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.36 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.32 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.29 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.27 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.21 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.06 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 96.01 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.85 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.75 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.62 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.56 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.3 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.22 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.07 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.69 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.51 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 94.51 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.94 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 93.38 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 93.33 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 93.08 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 92.06 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 92.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 91.92 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 91.66 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 91.57 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 90.36 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 88.41 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 87.3 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.5e-47 Score=355.82 Aligned_cols=213 Identities=64% Similarity=1.158 Sum_probs=187.0
Q ss_pred CCCCCcEEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 157 HPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 157 ~~~~~~~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
|++.|+||+++||+|.+.....++.++... +|||||++||++|+++....+ ..+|+.|++.++++.+.+|+++++||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~-~~~wd~~~~~~~~~~~~~P~~~~~GN 81 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGN 81 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccc-hHHHHHHHHHHHHHhhcceEEEeccc
Confidence 446799999999999877666677665443 899999999999987765444 67899999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
||+...+..+....|..|..+|.+|.++.....+.||+|++|++|||+||++..+..+.+|++||+++|+++++++++|+
T Consensus 82 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 161 (312)
T d2qfra2 82 HEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161 (312)
T ss_dssp GGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEE
T ss_pred ccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEE
Confidence 99865544445566788999999999887778889999999999999999998888889999999999999888889999
Q ss_pred EEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCc
Q 017284 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 315 iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
||++|+|+|++...+..+++.+|+.|++||++++||+||+||+|.|||++||++++
T Consensus 162 iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~ 217 (312)
T d2qfra2 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIA 217 (312)
T ss_dssp EEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCC
T ss_pred EEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCc
Confidence 99999999998876666778899999999999999999999999999999998765
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=9.7e-29 Score=194.24 Aligned_cols=111 Identities=50% Similarity=0.913 Sum_probs=103.7
Q ss_pred CcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEE
Q 017284 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHH 123 (374)
Q Consensus 44 ~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 123 (374)
|+|+++.+|++|++.++|+||||+++++++++|+|+|.|.+.+..+.|+||.+++.+...+.|...+|...++..+++|+
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~ 81 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEE
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEE
Confidence 68999999999999999999999999998999999999987788999999999998899999988888776777889999
Q ss_pred EEeCCCCCCCEEEEEeCCCCCCceEEEECCC
Q 017284 124 CLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154 (374)
Q Consensus 124 v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p 154 (374)
|+|+||+|||+|+||||+++||++++|+|+|
T Consensus 82 v~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 9999999999999999999999999999987
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=3.6e-29 Score=230.62 Aligned_cols=196 Identities=20% Similarity=0.272 Sum_probs=136.0
Q ss_pred CCcEEEEEecCCCCCCc----H------HHHH-HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHH--HHhhhcC
Q 017284 160 APYTFGIIGDLGQTYNS----L------STLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI--EQSAAYQ 226 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~----~------~~l~-~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~--~~~~~~~ 226 (374)
.++||+++||+|..... . ..+. .+++.+|||||++||++|.++..... +.+|.++...+ ......+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTHHHHHTTTTSCSGGGTTC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCccc-HHHHHHHHHHHhhhhhhcCC
Confidence 37899999999876432 1 1122 23334999999999999977654332 44554443322 2334679
Q ss_pred CeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEec------CCEEEEEEeCCC---------C---
Q 017284 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR------ASAHIIVLSSYS---------P--- 288 (374)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~------g~v~fi~Ldt~~---------~--- 288 (374)
|+++++||||+..+.. ....+..+..++.+| ..||++.+ ++++|++||+.. .
T Consensus 82 P~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp CEEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred ceEEeecccccccccc--cccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 9999999999854311 111233344455454 24566654 369999999831 0
Q ss_pred -----CCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 289 -----YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 289 -----~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
...+.+|++||+++|++ .+.+|+||++|+|+|+.... ......++.|.++|.+++|++|||||+|.|+|+
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~ 226 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE
T ss_pred cccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEE
Confidence 01246899999999998 56789999999999987543 345778899999999999999999999999998
Q ss_pred ccccCCcee
Q 017284 364 VRMSFPFHF 372 (374)
Q Consensus 364 ~~~~~~~h~ 372 (374)
.+. ++.++
T Consensus 227 ~~~-~~~~~ 234 (302)
T d1utea_ 227 QDE-NGLGF 234 (302)
T ss_dssp ECT-TCCEE
T ss_pred ecC-CccEE
Confidence 754 34443
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.94 E-value=3.6e-27 Score=187.20 Aligned_cols=113 Identities=56% Similarity=1.081 Sum_probs=102.9
Q ss_pred CcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCC-CCCCceEEEeecCCCCCceEEeEEEEEEeecccccE
Q 017284 42 SADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPN-ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGY 120 (374)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~-~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~ 120 (374)
.+|+|+.+++|.+|.+.++|+||||+++++++++|+|+|+|.. .++.+.|+||..++.+...+.|+..+|...+...+|
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~ 85 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAF 85 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCe
Confidence 4589999999999988899999999999998999999999963 345779999999999999999988888776777889
Q ss_pred EEEEEeCCCCCCCEEEEEeCCCCCCceEEEECCC
Q 017284 121 IHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154 (374)
Q Consensus 121 ~~~v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p 154 (374)
+|+|+|+||+|||+|+|||+++++|++++|||+|
T Consensus 86 ~H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 86 IHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 9999999999999999999998899999999997
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=8.1e-23 Score=184.28 Aligned_cols=188 Identities=22% Similarity=0.214 Sum_probs=125.3
Q ss_pred CCcEEEEEecCCCCCC---------c----HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh
Q 017284 160 APYTFGIIGDLGQTYN---------S----LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA 224 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~---------~----~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~ 224 (374)
..+||++++|+|.... . ..+++.+.+. +||+||++||++..+. ...++.+.+.+.++..
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~------~~~~~~~~~~l~~~~~ 76 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFAA 76 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC------HHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------hhHHHHHHHHhhhhhh
Confidence 3799999999997432 1 1234445443 7999999999996322 3455666666665542
Q ss_pred --cCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHHH
Q 017284 225 --YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWW 298 (374)
Q Consensus 225 --~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~W 298 (374)
.+|++.++||||... .+...+... .......+|++..++++|++|||.... ....+|.+|
T Consensus 77 ~~~~p~~~v~GNHD~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~w 142 (256)
T d2hy1a1 77 QLGAELVWVMGNHDDRA-----------ELRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 142 (256)
T ss_dssp HHTCEEEECCCTTSCHH-----------HHHHHTTCC---CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHH
T ss_pred hcCCCEEEEcccccchh-----------hhhhhhccc---cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHH
Confidence 589999999999531 122222111 112345678899999999999996432 235789999
Q ss_pred HHHHHhhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCcee
Q 017284 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHF 372 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~ 372 (374)
|+++|++. +.+.+||++|+|++....... .......+.+..++++++|+++|+||+|...+. ..+|+++
T Consensus 143 l~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~--~~~gi~~ 212 (256)
T d2hy1a1 143 LAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA--TFVGIPV 212 (256)
T ss_dssp HHHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE--EETTEEE
T ss_pred HHHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce--EECCEEE
Confidence 99999873 445678899999986543211 111112457888999999999999999986543 2344444
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.86 E-value=7.1e-22 Score=179.69 Aligned_cols=181 Identities=13% Similarity=0.128 Sum_probs=117.4
Q ss_pred cEEEEEecCCCCCC---------cH----HHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC
Q 017284 162 YTFGIIGDLGQTYN---------SL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~---------~~----~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~ 226 (374)
++|++++|+|.... .. .+++.+.+. +||+||++||+++... ...++.+.+.++++ .+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~------~~~y~~~~~~l~~l--~~ 72 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc------chhHHHHHHHHhcc--CC
Confidence 58999999997421 11 233444433 7999999999996322 33445555555443 58
Q ss_pred CeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHHHHHHH
Q 017284 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLREE 302 (374)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~WL~~~ 302 (374)
|+++++||||..... ...+..+..... .......|.++.++++||+|||.... ....+|++||+++
T Consensus 73 p~~~i~GNHD~~~~~----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 73 PLYLIPGNHDDKALF----LEYLQPLCPQLG------SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp CEEEECCTTSCHHHH----HHHHGGGSGGGC------SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred CEEEEecCccchHHH----HHHhhhhhhccc------cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 999999999974210 000111111110 11234568888899999999996542 2368999999999
Q ss_pred HhhccCCCCCeEEEEecccceecCCCCCC-CCHHHHHHHHHHHHHc-CCcEEEEcCccccccc
Q 017284 303 LKKVDREKTPWLIVLMHVPLYSSNVVHYM-EGESMRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (374)
Q Consensus 303 L~~~~~~~~~w~iv~~H~P~y~~~~~~~~-~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 363 (374)
|++. ..+++||++|||++........ ......+.+.++|+++ +|+++|+||+|.....
T Consensus 143 L~~~---~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred Hhhh---ccceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 9984 2345778889988765432211 1112245788899998 6999999999986543
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=2.6e-21 Score=177.11 Aligned_cols=206 Identities=17% Similarity=0.110 Sum_probs=123.3
Q ss_pred cEEEEEecCCCCCC----------------cHH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHH
Q 017284 162 YTFGIIGDLGQTYN----------------SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221 (374)
Q Consensus 162 ~~f~v~gD~~~~~~----------------~~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~ 221 (374)
|||++++|+|.+.. ... +++.+.+.+|||||++||++....... ......+.+..+.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~---~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR---DASDRALDTVMAE 80 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---TCHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcch---hHHHHHHHHHHHH
Confidence 89999999997521 111 233444559999999999996432110 1111223333333
Q ss_pred hh-hcCCeEEcCCCcccccCCCCCCcc-cc-cccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC----------
Q 017284 222 SA-AYQPWIWSAGNHEIEFMPNMGEVI-PF-KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---------- 288 (374)
Q Consensus 222 ~~-~~~P~~~v~GNHD~~~~~~~~~~~-~~-~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~---------- 288 (374)
+. ..+|+++++||||........... .. .....................+.+..++++|+.+++...
T Consensus 81 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
T d2nxfa1 81 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 160 (320)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSH
T ss_pred HHHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCccccccccccccc
Confidence 32 368999999999985321000000 00 000000000000111123456677889999999987320
Q ss_pred ------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCC
Q 017284 289 ------------------------------------YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332 (374)
Q Consensus 289 ------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~ 332 (374)
...+.+|++||+++|+++. .+..++|+++|+|++........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~~viv~~H~p~~~~~~~~~~- 238 (320)
T d2nxfa1 161 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD-HKQERVLIFSHLPVHPCAADPIC- 238 (320)
T ss_dssp HHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHH-HHTCEEEEEESSCCCTTSSCGGG-
T ss_pred ccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhh-hcCCceEEEECCCCccCCCCCcc-
Confidence 0125789999999998754 24467899999999865543211
Q ss_pred CHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccCCceec
Q 017284 333 GESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 333 ~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
.....+++..+|.++ +|+++|+||+|..++.. ..+|+|++
T Consensus 239 ~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-~~~g~~~i 279 (320)
T d2nxfa1 239 LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-DSSGAQHI 279 (320)
T ss_dssp SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-CTTSCEEE
T ss_pred chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-ccCCCEEE
Confidence 112245788899998 49999999999987653 46777764
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=2.2e-16 Score=137.86 Aligned_cols=177 Identities=10% Similarity=0.035 Sum_probs=105.6
Q ss_pred CcEEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccccc
Q 017284 161 PYTFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~ 239 (374)
+-+++++||+|......+ .++.+.+.++|+||++||++..... ..++..+.+.+.. ..+|+++++||||...
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~-----~~~~~~~~~~L~~--~~~pv~~i~GNHD~~~ 77 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----SRDYAAFFRILSE--AHLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----HHHHHHHHHHHGG--GCSCEEEECCTTSCSH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCcc-----chHHHHhhhhhcc--ccceEEEEecCCCchh
Confidence 347889999998643322 2333444599999999999953321 2233334333333 2689999999999632
Q ss_pred CCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC----------CCCChHHHHHHHHHHhhccCC
Q 017284 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP----------YVKYTPQWWWLREELKKVDRE 309 (374)
Q Consensus 240 ~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~----------~~~~~~Q~~WL~~~L~~~~~~ 309 (374)
..... ..+......+.. ......+.+..+++.++.+++... ......|..|+++.|+..
T Consensus 78 ~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 146 (228)
T d1uf3a_ 78 WEYLR-----EAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL--- 146 (228)
T ss_dssp HHHHH-----HHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS---
T ss_pred hhhhh-----hhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc---
Confidence 10000 000000000000 001123456778888888776221 112467889999988773
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
...+.|+++|+|++.....+. .. +.+.+++++++++++++||+|..
T Consensus 147 ~~~~~il~~H~p~~~~~~~~~-~~----~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 KDYPKIFLFHTMPYHKGLNEQ-GS----HEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp CSCCEEEEESSCBCBTTTBTT-SB----HHHHHHHHHHCCSEEEECCSSCE
T ss_pred cCCceEEEEeeeccCcccccc-cc----HHHHHHHHhcCCcEEEEcccccc
Confidence 344578889999976543321 12 35667788999999999999974
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.61 E-value=9.8e-16 Score=135.90 Aligned_cols=184 Identities=12% Similarity=0.081 Sum_probs=104.6
Q ss_pred CcEEEEEecCCCCCCcHHHH-HHHHHhCCCeEEecccccccCCCCccccchhh-----------------------HHHH
Q 017284 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRW-----------------------DSWG 216 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l-~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w-----------------------~~~~ 216 (374)
+.||+++||+|......+.+ +.+.+.+||+||++||+++.... ...| ..+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~ 76 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-----EKEYERAHLARREPNRKVIHENEHYIIETLD 76 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-----HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCC-----CHHHHHHHHhhhhhceeeeccccccchhhHH
Confidence 57999999999876555444 34455599999999999964221 1111 1122
Q ss_pred HHHHHhh-hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC------
Q 017284 217 RFIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY------ 289 (374)
Q Consensus 217 ~~~~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~------ 289 (374)
..++.+. ..+|++.++||||...... ....+......+.. ......+.+..+++.|+.+++....
T Consensus 77 ~~~~~L~~~~~pv~~i~GNHD~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T d2yvta1 77 KFFREIGELGVKTFVVPGKNDAPLKIF-----LRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148 (257)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHHHH-----HHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHHHHhcCCcEEEEeCCCcchhhHH-----HHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccch
Confidence 2333333 3589999999999632100 00011110000000 0112234455577888877653211
Q ss_pred C---CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 290 V---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 290 ~---~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
. ....+..|++..++. .+....|+++|+|++.+...... ......+.+..++++++++++++||+|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 149 FVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp SSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 0 123344555555554 45567899999999765432111 11112356778889999999999999964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.04 E-value=2.1e-10 Score=104.81 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=48.3
Q ss_pred cEEEEEecCCCCCCc----------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hcC
Q 017284 162 YTFGIIGDLGQTYNS----------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~----------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~~ 226 (374)
+||+++||+|.+... ...+.+ +.+.++|+||++||++..... . ......+.+.++.+. ..+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~-~---~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP-S---PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC-C---HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC-C---HHHHHHHHHHHhhHHhcCC
Confidence 589999999976431 123333 334599999999999853221 1 122234455555554 368
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999974
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.97 E-value=1.9e-10 Score=100.93 Aligned_cols=69 Identities=10% Similarity=0.059 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCcH-HHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSL-STLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~-~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
++++++||+|...... ..++.+.+. ++|.+|++||++..... -.+..+.+..+....+++.++|||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~--------~~evi~~l~~l~~~~~v~~v~GNH 72 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY--------PKEVIEVIKDLTKKENVKIIRGKY 72 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC--------HHHHHHHHHHHHHHSCEEEECCHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC--------cHHHHHHHHHHhhcCCEEEEeccH
Confidence 4899999999653322 233444322 56999999999953221 134455556665566899999999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 73 D~~ 75 (251)
T d1nnwa_ 73 DQI 75 (251)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.77 E-value=5.5e-08 Score=82.21 Aligned_cols=60 Identities=17% Similarity=0.284 Sum_probs=40.2
Q ss_pred EEEEecCCCCCCc---HHHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 164 FGIIGDLGQTYNS---LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 164 f~v~gD~~~~~~~---~~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
++++||+|..... ...+..+.+ .++|.||++||++. ....+.++.+. -+++.|.||||..
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~-------------~~~l~~l~~l~--~~v~~V~GN~D~~ 69 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-------------QEYVEMLKNIT--KNVYIVSGDLDSA 69 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-------------HHHHHHHHHHC--SCEEECCCTTCCS
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCC-------------HHHHHHHHhhC--CCEEEEcCCCCcc
Confidence 7899999975432 234455544 48999999999982 12223334332 3688999999964
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.75 E-value=3.2e-08 Score=82.84 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=41.0
Q ss_pred cEEEEEecCCCCCCcH---HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~---~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||+|...... ..+.++.+. ++|.|+++||++. .+-.+.++.+ ..|++.|.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~-------------~e~l~~l~~~--~~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc-------------hhhHHHHHhh--CCceEEEeCCcCc
Confidence 5899999999764332 334433333 7999999999982 1222333333 2478899999996
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 66 ~ 66 (182)
T d1z2wa1 66 N 66 (182)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.72 E-value=9.6e-09 Score=84.70 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=42.2
Q ss_pred cEEEEEecCCCCCCc-HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||+|..... ..+++.+.+.++|.|+++||++.. ..+ +.+. ....|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~------------~~~-~~l~--~~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL------------FVI-KEFE--NLNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST------------HHH-HHGG--GCSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH------------HHH-HHHh--hcCccEEEEccccccc
Confidence 589999999975333 234455556699999999999831 111 1111 2246899999999964
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.66 E-value=1.2e-07 Score=78.48 Aligned_cols=56 Identities=13% Similarity=0.063 Sum_probs=38.7
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHH---hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQ---SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~---~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
..|++++||+|... .+++++.+ .++|.|+++||+.+.... . ...|+.+|.||||.
T Consensus 3 ~~kI~viSD~Hgn~---~al~~vl~~~~~~~D~iih~GD~~~~~~~---------~----------~~~~~~~V~GN~D~ 60 (173)
T d3ck2a1 3 KQTIIVMSDSHGDS---LIVEEVRDRYVGKVDAVFHNGDSELRPDS---------P----------LWEGIRVVKGNMDF 60 (173)
T ss_dssp CEEEEEECCCTTCH---HHHHHHHHHHTTTSSEEEECSCCCSCTTC---------G----------GGTTEEECCCTTCC
T ss_pred CCEEEEEeccCCCH---HHHHHHHHHhhcCCCEEEECCcccCcccc---------h----------hhcCCeEEecCccc
Confidence 46999999999643 33443332 379999999998863221 1 11378899999996
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 61 ~ 61 (173)
T d3ck2a1 61 Y 61 (173)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.60 E-value=3.1e-07 Score=77.07 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=34.2
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+|+++|.|+...... ........+..+..+.+++++|.||+|...
T Consensus 108 ~i~l~H~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITE---RYPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCC---SCHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCcccccc---ccccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 689999998654332 223455677889999999999999999753
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=3.9e-07 Score=83.61 Aligned_cols=186 Identities=17% Similarity=0.125 Sum_probs=92.1
Q ss_pred CCcEEEEEecCCCCCC-------cH----HHHHHHHH----hCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 160 APYTFGIIGDLGQTYN-------SL----STLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~-------~~----~~l~~~~~----~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
..++|++++|+|.... .. ..+.++.+ .+++ ++|.+||+...... .. ........+.++.+.
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~--s~-~~~g~~~~~~mn~~g 83 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLVG 83 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH--HH-TTTTHHHHHHHHHHT
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH--HH-HhCChHHHHHHHhcC
Confidence 3689999999985321 11 12334332 3555 55669999843211 00 111222333344331
Q ss_pred hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCC-------C-CCCCCceEEEecCCE--EEEEEeCCCC-----
Q 017284 224 AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-------S-KSTNPLWYAIRRASA--HIIVLSSYSP----- 288 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~-------~-~~~~~~~ysf~~g~v--~fi~Ldt~~~----- 288 (374)
.=..++||||+++... .+..+......|.-. . ......|.-++.+++ -||.+-+...
T Consensus 84 ---~Da~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~ 155 (337)
T d1usha2 84 ---YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (337)
T ss_dssp ---CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred ---CeEEEechhhhccchH-----HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccC
Confidence 1246789999965311 111111122222100 0 011234566778885 5677755221
Q ss_pred --CC------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 289 --YV------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 289 --~~------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
.. ...+..+...++|++. .++..+|++.|.+............ ....+...+...+||++++||.|..
T Consensus 156 ~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 156 PEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp CCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCcccCceEEecCccCcc
Confidence 00 1123333334455542 4678899999998764432111111 1123333344458999999999974
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.23 E-value=1.2e-06 Score=79.84 Aligned_cols=183 Identities=16% Similarity=0.194 Sum_probs=86.5
Q ss_pred CCCcEEEEEecCCCCCC----------c---HHH-HHHH---HH-hCCC-eEEecccccccCCCCccccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYN----------S---LST-LKHY---MQ-SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~----------~---~~~-l~~~---~~-~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
-..++|++..|+|.... . ... ...+ .+ .+++ ++|.+||+.......... ... ...+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~-~~~----G~~~ 83 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-SPN----GLKS 83 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-SST----TTTT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhc-ccC----ChHH
Confidence 35799999999996321 0 111 2222 22 2566 556799999643211000 001 1122
Q ss_pred HHhhhcCCe-EEcCCCcccccCCCCCCcccccccccccccCcCCC--------C---CCCCceEEEecC--CEEEEEEeC
Q 017284 220 EQSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--------K---STNPLWYAIRRA--SAHIIVLSS 285 (374)
Q Consensus 220 ~~~~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~--------~---~~~~~~ysf~~g--~v~fi~Ldt 285 (374)
-+++..+++ ..++||||+++.+.. ...+......+..|.-.+ + .....|.-+..+ ++.++.+.+
T Consensus 84 ~~~mn~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 84 TPIFIKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp HHHHTTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred HHHHhccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 233344555 678999998643100 000111111122222110 0 012345566665 488888876
Q ss_pred CCCCCC---C--------hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCc-EE
Q 017284 286 YSPYVK---Y--------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FI 352 (374)
Q Consensus 286 ~~~~~~---~--------~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vd-lv 352 (374)
...... + ..+..|+++.++ .++.-+|++.|.++-... .+ .......+-... +++ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~------~~-~~~~~~~la~~~~~~~~~i 230 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-FYQVHQYLRQFFPDTIIQY 230 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-HHHHHHHHHHHCTTSEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc------cc-cchHHHHHHHhCCCCCEEE
Confidence 432211 0 112234444332 467889999998763211 11 111112222222 344 68
Q ss_pred EEcCccc
Q 017284 353 FAGHVHA 359 (374)
Q Consensus 353 lsGH~H~ 359 (374)
|.||.|.
T Consensus 231 igGHsH~ 237 (322)
T d3c9fa2 231 FGGHSHI 237 (322)
T ss_dssp EECSSCC
T ss_pred ecccccc
Confidence 9999996
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=4e-05 Score=55.61 Aligned_cols=70 Identities=23% Similarity=0.379 Sum_probs=45.5
Q ss_pred CCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------C
Q 017284 73 GKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------G 142 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------~ 142 (374)
.+++.|.|..+...+. -.|+|....+.......+. ....+|++|+|+|.|.+||.. +
T Consensus 14 ~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 80 (93)
T d1x4xa1 14 ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAG 80 (93)
T ss_dssp TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCC
T ss_pred CCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCc
Confidence 3789999986543322 3466766554333222211 123468999999999999842 3
Q ss_pred CCCceEEEECCCC
Q 017284 143 DSSREFWFQTPPK 155 (374)
Q Consensus 143 ~~s~~~~F~T~p~ 155 (374)
.+|+...|+|+|+
T Consensus 81 ~~S~~~~~~Tpps 93 (93)
T d1x4xa1 81 PFSEVVACVTPPS 93 (93)
T ss_dssp CBCCCEEEECCCC
T ss_pred CCCCcEEEEeCCC
Confidence 5678889999874
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=9.7e-06 Score=66.95 Aligned_cols=75 Identities=19% Similarity=0.157 Sum_probs=44.0
Q ss_pred cEEEEEecCCCCCCc-HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||+|..... ..+++.+.+.++|.+|++||++..................+.++. ...|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE--VAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT--TGGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHh--cCCcEEEecCCCCch
Confidence 589999999964322 223344445599999999999853322111101111122222222 235899999999974
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.83 E-value=7.1e-05 Score=66.97 Aligned_cols=172 Identities=17% Similarity=0.123 Sum_probs=86.1
Q ss_pred CcEEEEEecCCCCCC--------------cHH----HHHHHHHhCC-CeEEecccccccCCCCccccchhhHHHHHHHHH
Q 017284 161 PYTFGIIGDLGQTYN--------------SLS----TLKHYMQSGG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~--------------~~~----~l~~~~~~~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~ 221 (374)
.++|+..+|+|..-. ... .++++.+.++ -++|.+||++..... .. ..+...-.+.++.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~--~~-~~~g~~~~~~~n~ 78 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY--FN-QYRGLADRYFMHR 78 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH--HH-HHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh--Hh-hhcchhHHHHHHh
Confidence 368889999985421 122 2344444455 467889999853211 00 0011111222222
Q ss_pred hhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcC----------CCCCCCCceEEEecCCE--EEEEEeCCC--
Q 017284 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT----------ASKSTNPLWYAIRRASA--HIIVLSSYS-- 287 (374)
Q Consensus 222 ~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~----------~~~~~~~~~ysf~~g~v--~fi~Ldt~~-- 287 (374)
+ -.=..++||||+.++.. .+..+.....+|.- .....-..|.-.+.+++ -||.+-+..
T Consensus 79 ~---gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~ 150 (302)
T d2z1aa2 79 L---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTR 150 (302)
T ss_dssp T---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHH
T ss_pred c---ccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccc
Confidence 2 23357999999975421 01111111111110 00112234667788885 456655531
Q ss_pred -------CC--CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCc
Q 017284 288 -------PY--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHV 357 (374)
Q Consensus 288 -------~~--~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~ 357 (374)
.+ ....+..++..++|++ .+..-+|++.|..... . ..+..+. +||++++||.
T Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~------------d---~~la~~~~giD~ii~gh~ 212 (302)
T d2z1aa2 151 EISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE------------D---LKLARRLVGVQVIVGGHS 212 (302)
T ss_dssp HHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH------------H---HHHHTTCSSCCEEEECSS
T ss_pred ccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch------------h---hHHHhcCCCeeeeecCcc
Confidence 00 1122344555555554 5677899999975310 0 1233333 6999999999
Q ss_pred cccc
Q 017284 358 HAYE 361 (374)
Q Consensus 358 H~ye 361 (374)
|..-
T Consensus 213 h~~~ 216 (302)
T d2z1aa2 213 HTLL 216 (302)
T ss_dssp CCCB
T ss_pred ceee
Confidence 9854
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.81 E-value=3.1e-05 Score=56.64 Aligned_cols=83 Identities=16% Similarity=0.272 Sum_probs=49.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC-CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~-~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+.-.+ .+++.|+|..... .....++|...-...... ..... ...+++|+||+|+|.|.+
T Consensus 4 ~~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~----~~~~~-------~~t~~~i~~L~p~t~Y~~ 70 (94)
T d1x5aa1 4 LSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEE----WHQMV-------LEPRVLLTKLQPDTTYIV 70 (94)
T ss_dssp CCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCE----EEEEE-------SSSEEEEESCCSSCEEEE
T ss_pred CCCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCce----EEEee-------ccCEEEECCCCCCCEEEE
Confidence 456666666554 4899999986532 222233443321110100 00000 012467999999999999
Q ss_pred EeC------CCCCCceEEEECCC
Q 017284 138 KIG------DGDSSREFWFQTPP 154 (374)
Q Consensus 138 ~v~------~~~~s~~~~F~T~p 154 (374)
||. .+.+|+...|+|.|
T Consensus 71 rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 71 RVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEcCCcCcCCCCCEEEEeCC
Confidence 984 34578899999987
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=5e-05 Score=55.13 Aligned_cols=82 Identities=20% Similarity=0.209 Sum_probs=48.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCC-----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGS-----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~-----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.|..+.+...+ .+++.|.|..+..... -.++|............... ....++|+||+|+|.
T Consensus 3 ~P~~~~v~~~~--~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~L~p~t~ 69 (96)
T d1x5xa1 3 MPASPVLTKAG--ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG-----------EDLAYTVKNLRRSTK 69 (96)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEE-----------SCSEEEEESCCSSCE
T ss_pred cCCCCEEEEec--CCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecC-----------CCCEEEECCCCCCCE
Confidence 34455555433 4789999987543221 13444444332222211110 112357899999999
Q ss_pred EEEEeCC------CCCCceEEEECCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.+||.. +.+|....|+|.|
T Consensus 70 Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 70 YKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 9999853 2367788899987
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=8.8e-05 Score=54.67 Aligned_cols=86 Identities=14% Similarity=0.199 Sum_probs=52.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-C----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|..+.+... .++++|.|..+...+ . -.|+|...++..+........ .......++|+||+|+|
T Consensus 4 ~~P~~~~~~~~---~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~L~p~t 73 (101)
T d2haza1 4 SSPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPET 73 (101)
T ss_dssp CCCEEEEEEEC---SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH-------HHHHHSEEEECSCCTTC
T ss_pred cCCccCEEEee---CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeee-------cccceeEEEecCCCCCe
Confidence 46654444433 368999999864322 2 247777665433221111100 01112346899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
.|.+||.. +.+|+...|+|.|
T Consensus 74 ~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 74 TYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 99999853 4578888999987
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.66 E-value=0.00019 Score=51.55 Aligned_cols=82 Identities=17% Similarity=0.177 Sum_probs=53.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+.... .+++.|+|.-+... ..-.|+|.............. .....+.+++|+|+|.|.+
T Consensus 3 ~aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 69 (92)
T d1qg3a1 3 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEM 69 (92)
T ss_dssp CCCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEE
Confidence 467778877554 58999999976432 234677877654332221110 1223577999999999999
Q ss_pred EeCC------CCCCceEEEECC
Q 017284 138 KIGD------GDSSREFWFQTP 153 (374)
Q Consensus 138 ~v~~------~~~s~~~~F~T~ 153 (374)
||.. +.+|....++|+
T Consensus 70 ~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 70 KVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEeCCcCcCCCCCEEEEcC
Confidence 9843 356777888884
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=8.6e-05 Score=55.36 Aligned_cols=88 Identities=24% Similarity=0.419 Sum_probs=54.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.......+++.|+|..+...... .|.|....+...... ..... ..-....+|+||+|+|.
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 84 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTP 84 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTS--EEEEE------STTCSEEEECSCCSSSE
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCccee--EEEEe------CCCeeEEEECCCCCCCE
Confidence 4577788776544468999999976433222 456655443322110 00111 11223467999999999
Q ss_pred EEEEeCC------CCCCceEEEECCC
Q 017284 135 YYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.+||.. +.+|+...|+|+.
T Consensus 85 Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 85 YYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 9999843 3578888999965
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=0.00014 Score=54.12 Aligned_cols=84 Identities=20% Similarity=0.284 Sum_probs=53.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-C----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|+.|.+.... .+++.|+|.-+... + .-.|.|...++..+..... .......++|++|+|+|
T Consensus 12 ~~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t 79 (107)
T d1x5fa1 12 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPAT 79 (107)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTC
T ss_pred cCCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCC
Confidence 578888887654 58899999865221 1 2256676655433322111 11123557899999999
Q ss_pred EEEEEeCC------CCCCceEEEECCC
Q 017284 134 KYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
+|.+||.. +.+|....++|.|
T Consensus 80 ~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 80 VYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 99999853 1346777888876
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=7.9e-05 Score=54.67 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=44.8
Q ss_pred CCceEEEEEcCCCC-----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------
Q 017284 73 GKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------ 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~-----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------ 141 (374)
.+++.|+|..+... ..-.|+|.......+..+. . . ....+++++|+|+|.|.+||..
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~----~--~~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------Q----G--SEVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------E----E--SCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee------c----C--CceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 47899999865322 1245677665543332211 1 0 1123578999999999999843
Q ss_pred CCCCceEEEECCC
Q 017284 142 GDSSREFWFQTPP 154 (374)
Q Consensus 142 ~~~s~~~~F~T~p 154 (374)
+.+|+...++|.|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 3567888898876
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.58 E-value=0.00011 Score=53.77 Aligned_cols=82 Identities=17% Similarity=0.307 Sum_probs=52.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+...+ .+++.|.|..+.... .-.|+|...++....... .. ......+|+||+|+|.
T Consensus 5 ~~p~~~~~~~~s--~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~ 71 (98)
T d1x5la1 5 SQVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----LK------AVTTRATVSGLKPGTR 71 (98)
T ss_dssp CCCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----EE------ESSSEEEECSCCTTCE
T ss_pred CCCCceEEEecc--CCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----ec------CCceEEEECCCCCCCE
Confidence 346666666554 588999998765332 234777766543322211 00 1123567999999999
Q ss_pred EEEEeCC------CCCCceEEEECC
Q 017284 135 YYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
|.+||.. +.+|+...|+|.
T Consensus 72 Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 72 YVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 9999843 357888899984
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=0.00024 Score=52.11 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=53.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
.+|..++++.-. .+++.|+|....... ...|+|....+..... .- .. .......+.|+||+|+
T Consensus 4 ~pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~-~~--~~------~~~~~~~~~i~~L~p~ 72 (104)
T d2b5ib2 4 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA-PL--LT------LKQKQEWICLETLTPD 72 (104)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTS-CC--EE------ECSCCCEEEECSCCTT
T ss_pred CCCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEecccccceee-eE--Ee------cCCCcEEEEECCCCCC
Confidence 468888888665 479999998764221 1245665554321110 00 00 0112334688999999
Q ss_pred CEEEEEeCC-------C---CCCceEEEECCC
Q 017284 133 TKYYYKIGD-------G---DSSREFWFQTPP 154 (374)
Q Consensus 133 t~Y~Y~v~~-------~---~~s~~~~F~T~p 154 (374)
|.|.+||.. + .||+...|+|.|
T Consensus 73 t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 73 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 999999853 1 357778999987
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=0.00013 Score=52.74 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=49.5
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCCCCce----EEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNELGSNR----VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~----V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
|..+++.... .++++|.|.-+....... |+|.............. .....+.|++|+|+|.|.
T Consensus 4 ~~~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~ 70 (95)
T d2djsa1 4 VPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYV 70 (95)
T ss_dssp CSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEE
T ss_pred CCccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEE
Confidence 3345555443 588999998765443333 45555443322211110 012346799999999999
Q ss_pred EEeCC------CCCCceEEEECCC
Q 017284 137 YKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 137 Y~v~~------~~~s~~~~F~T~p 154 (374)
+||.. +.+|+...|+|.|
T Consensus 71 ~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 71 VQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCCCCCCCCEEEEeCC
Confidence 99853 2467788899986
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.50 E-value=0.00066 Score=48.42 Aligned_cols=72 Identities=18% Similarity=0.227 Sum_probs=47.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|+.+.++.-. .+++.|+|..+... ..-.|+|....+......... ....-...++|+||+|+|.|.++
T Consensus 3 aP~~l~v~~~~--~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 72 (92)
T d1tdqa2 3 APKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 72 (92)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEE
Confidence 68888887654 48899999876433 344678887654332211111 01223556799999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 73 V~a 75 (92)
T d1tdqa2 73 ISA 75 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=0.00018 Score=52.36 Aligned_cols=84 Identities=15% Similarity=0.174 Sum_probs=53.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
+|.++.++......+++.|+|..+... ..-.|+|...++...... .. -++-...++|+||+|||.|..
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~----~~------v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----AT------IPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE----EE------ECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee----ec------cCCCccEEEECCcccCcEEEE
Confidence 588888887765568999999986421 224678887654322110 01 122344568999999999999
Q ss_pred EeCC---CCCC--ceEEEECC
Q 017284 138 KIGD---GDSS--REFWFQTP 153 (374)
Q Consensus 138 ~v~~---~~~s--~~~~F~T~ 153 (374)
+|.. .+.+ -...|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9853 2233 24667764
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00042 Score=49.92 Aligned_cols=82 Identities=18% Similarity=0.371 Sum_probs=50.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|..+.+.... .+++.|.|..+...+. -.|+|....+....... . .....++.++||+|+|.
T Consensus 2 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~ 68 (93)
T d2vkwa2 2 SAPKLEGQMGED--GNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----L------PSGSDHVMLKSLDWNAE 68 (93)
T ss_dssp CCCEEEEEECTT--SSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----E------CTTCCEEEECSCCTTCE
T ss_pred CCCccCEeEEcC--CCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-----c------cCCceEEEEeccccceE
Confidence 357666655433 5899999998754332 35778776653221110 0 11223567999999999
Q ss_pred EEEEeCCC-----CCCceEEEECC
Q 017284 135 YYYKIGDG-----DSSREFWFQTP 153 (374)
Q Consensus 135 Y~Y~v~~~-----~~s~~~~F~T~ 153 (374)
|.+||..- +......|+|.
T Consensus 69 Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 69 YEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEEcCCCCcCCEeEEEEec
Confidence 99998541 12225678874
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00062 Score=50.87 Aligned_cols=85 Identities=14% Similarity=0.241 Sum_probs=54.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC------C----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
..|..|+++..+ +++.|+|..+.... . -.|+|............- . .......+.+.+
T Consensus 7 ~pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 74 (114)
T d2gysa2 7 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAIL---L------SNTSQATLGPEH 74 (114)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEE---E------ESSSEEEECTTT
T ss_pred CcCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEe---e------ccCceEEEEeCC
Confidence 578889987654 58999999874221 1 246666655432221110 0 111344678999
Q ss_pred CCCCCEEEEEeCC------C------CCCceEEEECCCC
Q 017284 129 LEYDTKYYYKIGD------G------DSSREFWFQTPPK 155 (374)
Q Consensus 129 L~p~t~Y~Y~v~~------~------~~s~~~~F~T~p~ 155 (374)
|+|+|.|..||.. + .||+...|+|+|.
T Consensus 75 L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 75 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 9999999999843 1 4678899999874
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00013 Score=53.69 Aligned_cols=83 Identities=17% Similarity=0.346 Sum_probs=50.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+..|..+.+.... .+++.|+|..+... ..-.|+|............. ... ....|+||+|+|.|
T Consensus 11 P~~P~~~~~~~~~--~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y 76 (102)
T d1x5za1 11 PGQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EPG--TSYRLQGLKPNSLY 76 (102)
T ss_dssp CCCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CSS--SEEEEECCCTTCEE
T ss_pred CcCCCCeEEEEcc--CCEEEEEEECCCCCCccceEEEEEeCCCCceEEEEc----------CCc--CEEEECCCCCCCEE
Confidence 3568888877544 47899999975321 12355666544322211110 011 13578999999999
Q ss_pred EEEeCC------CCCCceEEEECCC
Q 017284 136 YYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 136 ~Y~v~~------~~~s~~~~F~T~p 154 (374)
.+||.. +.+|....++|+.
T Consensus 77 ~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 77 YFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 999853 2356677888864
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=0.00023 Score=52.48 Aligned_cols=80 Identities=15% Similarity=0.290 Sum_probs=50.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+.... .+++.|+|..+.... .-.|+|...+.......... ...+.|+||+|+|.
T Consensus 12 ~~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~ 76 (103)
T d1x5ga1 12 GPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTE 76 (103)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCE
T ss_pred ccCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCE
Confidence 356677776544 478999998654322 12467776654333222211 12357999999999
Q ss_pred EEEEeCC------CCCCceEEEECC
Q 017284 135 YYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 135 Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
|.++|.. +.+|....++|+
T Consensus 77 Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 77 YSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 9999843 235666677775
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=0.0001 Score=55.14 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=41.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+|+.+.+.......+++.|.|..+...+.. .|+|...++. +...... .......++++||+|+|+|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~-~~~~~~~---------~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAP-WTVLLAS---------VDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCC-CEEEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCC-ceEEeee---------ecCCccEEEECCCCCCCEE
Confidence 444444444433457899999876443322 4566654432 1111110 0112234678999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.+||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.0008 Score=49.12 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=46.8
Q ss_pred CCCceEEEEee--CCCCCceEEEEEcCCCC----CCce----EEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 59 NAPQQVRITQG--DYDGKAVIISWVTPNEL----GSNR----VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 59 ~~p~~v~lt~~--~d~~~~~~v~W~t~~~~----~~~~----V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
..|..+.+..- +...+++.|+|..+... .... ++|....+....... ......++|.|
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECC
Confidence 46777777632 33457899999976421 1123 344444432221111 01123467899
Q ss_pred CCCCCEEEEEeCC-------CCCCceEEEECC
Q 017284 129 LEYDTKYYYKIGD-------GDSSREFWFQTP 153 (374)
Q Consensus 129 L~p~t~Y~Y~v~~-------~~~s~~~~F~T~ 153 (374)
|+|+|.|.+||.. +.||+...++||
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999853 346888888885
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.38 E-value=0.00079 Score=47.96 Aligned_cols=77 Identities=17% Similarity=0.299 Sum_probs=46.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.+|..+.+..-. .+++.|+|.-+.. ......|....+.. ..... . . -..+++||+|+|+|.||
T Consensus 5 ~~P~~l~~~~~~--~~sv~lsW~~p~~-~~~i~~Y~i~~~~~-~~~~~--------~-~----t~~~~~~L~p~t~Y~~~ 67 (88)
T d1k85a_ 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGTA-LATTV--------T-G----TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESSS-EEEEE--------S-S----SEEEECCCCSSCEEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEeCCCC-CCCEEEEEEEccce-EEEec--------C-C----CEEEECCCCCCCEEEEE
Confidence 578888877543 4789999986532 33455665543211 11100 0 1 13578999999999999
Q ss_pred eCC----C---CCCceEEEEC
Q 017284 139 IGD----G---DSSREFWFQT 152 (374)
Q Consensus 139 v~~----~---~~s~~~~F~T 152 (374)
|.. | .+|....++|
T Consensus 68 V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 68 VKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEEETTTEECCCCCCEEEEC
T ss_pred EEEEECCCCcCCCCcCEEEEC
Confidence 853 1 2345555554
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00036 Score=51.50 Aligned_cols=83 Identities=14% Similarity=0.245 Sum_probs=50.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEE----EeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQ----YGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~----y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+.... .++++|+|.-+......... |.............. .--....+.+|+|+|
T Consensus 11 P~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 77 (105)
T d1x3da1 11 PDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM-----------GSQKQFKITKLSPAM 77 (105)
T ss_dssp CCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE-----------ESCSEEEEESCCTTC
T ss_pred CcCCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec-----------CCccEEEecCCcCCc
Confidence 3567777777554 47899999877544444333 333332221111111 011245788999999
Q ss_pred EEEEEeCC------CCCCceEEEECC
Q 017284 134 KYYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 134 ~Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
+|.+||.. +.+|+...|+|.
T Consensus 78 ~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 78 GCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEEEECCCeEcCCCCcEEEECC
Confidence 99999853 357778888874
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.35 E-value=0.0011 Score=48.47 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=49.4
Q ss_pred CCCceEEEEe--eCCCCCceEEEEEcCCCCC----Cc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCC
Q 017284 59 NAPQQVRITQ--GDYDGKAVIISWVTPNELG----SN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (374)
Q Consensus 59 ~~p~~v~lt~--~~d~~~~~~v~W~t~~~~~----~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~g 128 (374)
..|..|.+.. .....+++.|+|..+.... .. .|+|...+...+...... ....++|.|
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~ 71 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFD 71 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECC
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCC
Confidence 4677776653 2344678999999874321 12 455666554433222110 122568999
Q ss_pred CCCCCEEEEEeCC-------CCCCceEEEECC
Q 017284 129 LEYDTKYYYKIGD-------GDSSREFWFQTP 153 (374)
Q Consensus 129 L~p~t~Y~Y~v~~-------~~~s~~~~F~T~ 153 (374)
|+|||.|.+||.. +.||+.-.++||
T Consensus 72 L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 72 LYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 9999999999853 246666666664
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.31 E-value=0.001 Score=48.43 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=53.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
.+|..+++.... .++++|.|....... .-.|+|...++.......-... .......+|++|+|+
T Consensus 3 ~~P~~~~~~~~s--~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~--------~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 3 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--------EGDRYWHSISHLQPE 72 (101)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEE--------ETTCCEEEECSCCTT
T ss_pred CCCcccEEEEEc--CCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEE--------cCCeeEEEEcCCCCC
Confidence 467778887664 589999998652111 1247777655432211111000 111224468999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|.|.+||.. +.+|+...++|..
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 999999853 3578888898853
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.0012 Score=48.57 Aligned_cols=84 Identities=19% Similarity=0.286 Sum_probs=51.0
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-C----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
..|..|.+....+ ...+.|.|..+.... . -.|+|....+..... .... ..-...+.|.+|+|+|
T Consensus 6 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~----~~~~------~~~~t~~~i~~L~p~t 74 (105)
T d1erna2 6 DAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ----RVEI------LEGRTECVLSNLRGRT 74 (105)
T ss_dssp CCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE----EEEE------CTTCCEEEECSCCSSC
T ss_pred CCCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCceE----EEee------cCCccEEEEeCCCCCc
Confidence 5688888887664 367999999763221 2 256666654322111 0110 0112356799999999
Q ss_pred EEEEEeCC--------C---CCCceEEEECC
Q 017284 134 KYYYKIGD--------G---DSSREFWFQTP 153 (374)
Q Consensus 134 ~Y~Y~v~~--------~---~~s~~~~F~T~ 153 (374)
+|.+||.. | .||....++||
T Consensus 75 ~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 75 RYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 99999843 1 35666777774
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00045 Score=50.25 Aligned_cols=82 Identities=15% Similarity=0.062 Sum_probs=49.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC--------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~--------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
..|..|.+..-. .+++.|+|..+..+. ...|+|............-. . ....++|+||+
T Consensus 3 ~pP~~v~~~~~s--~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~--~~~~~~i~~L~ 69 (100)
T d1x5ja1 3 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN---------A--TTLSYLVTGLK 69 (100)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECC---------B--CSSEEEEESCC
T ss_pred CCCcCeEEEEec--CCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecC---------C--CccEEEECCCC
Confidence 357777776544 589999998653211 12456655544322111110 1 11246789999
Q ss_pred CCCEEEEEeCC------CCCCceEEEECC
Q 017284 131 YDTKYYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
|+|.|.+||.. +.+|....++|.
T Consensus 70 p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 70 PNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 99999999853 346666667764
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.21 E-value=0.002 Score=48.82 Aligned_cols=97 Identities=16% Similarity=0.206 Sum_probs=55.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEe--EEEEEEeecc---cccEEEEEEeCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEG--TVTNYTFYKY---KSGYIHHCLVDD 128 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g--~~~~~~~~~~---~~~~~~~v~l~g 128 (374)
+.+|..|.++.+ .+++.|+|.-+.... .-.|+|............. ....+..... ..+.....++.+
T Consensus 8 P~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (123)
T d1wfta_ 8 PGAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHID 84 (123)
T ss_dssp CCCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCB
T ss_pred CcCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcC
Confidence 467888888763 478999999664322 3467787765432211000 0011110000 000011236889
Q ss_pred CCCCCEEEEEeCC------CCCCceEEEECCCCCC
Q 017284 129 LEYDTKYYYKIGD------GDSSREFWFQTPPKIH 157 (374)
Q Consensus 129 L~p~t~Y~Y~v~~------~~~s~~~~F~T~p~~~ 157 (374)
|+|+|.|.+||.. +.+|++..|+|.+..+
T Consensus 85 L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~ 119 (123)
T d1wfta_ 85 YTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSG 119 (123)
T ss_dssp CSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSS
T ss_pred CCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCC
Confidence 9999999999853 3467788898866543
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00078 Score=47.89 Aligned_cols=70 Identities=11% Similarity=0.201 Sum_probs=45.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|.++.++.-. .+++.|+|..+... ..-.|+|....+....... .. +.-...+.|+||+|+|.|.++
T Consensus 3 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----~v------~~~~~~~~i~~L~p~t~Y~~~ 70 (89)
T d1fnfa3 3 SPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----RV------PHSRNSITLTNLTPGTEYVVS 70 (89)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----EE------ETTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----EE------CCCccEEEECCCcccCEEEEE
Confidence 57777777443 58999999976433 2345788876543332111 10 112335689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 71 V~a 73 (89)
T d1fnfa3 71 IVA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.00062 Score=49.83 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|.++++.--. .+++.|+|...... ..-.|+|...++..... ... +-...++|+||+|||.|.+
T Consensus 2 ~~P~~l~~~~~t--~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~------~~~------~~~~~~~l~~L~p~t~Y~~ 67 (102)
T d2cuha1 2 DGPTQLRALNLT--EGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQA------ETP------GSAVDYPLHDLVLHTNYTA 67 (102)
T ss_dssp SSCEEEECCCCS--SSCEEEEEECCSSCCSEEEEEEECSSSCCEEE------EEE------TTCSEEEECSCCSSSEEEE
T ss_pred cCCCccEEEEeC--CCEEEEEEEeeeccceeeEEEEEeccccceee------eee------eeeeeEEEccEEeeEEEEE
Confidence 467777776433 58999999876432 33467776654322111 110 1122567999999999999
Q ss_pred EeCC---C--CCCceEEEECCCC
Q 017284 138 KIGD---G--DSSREFWFQTPPK 155 (374)
Q Consensus 138 ~v~~---~--~~s~~~~F~T~p~ 155 (374)
+|.. + .......|+|.+.
T Consensus 68 ~V~a~~~~~~s~~~~~~~~T~~~ 90 (102)
T d2cuha1 68 TVRGLRGPNLTSPASITFTTGLE 90 (102)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCCcCCEEEEEECCCC
Confidence 9853 1 2233567888764
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.00081 Score=49.49 Aligned_cols=72 Identities=15% Similarity=0.029 Sum_probs=44.8
Q ss_pred CCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------C
Q 017284 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------G 142 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------~ 142 (374)
.+++.|+|.-..... .-.|+|+...+......... ..+-....+|+||+|+|.|.+||.. |
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G 90 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRCIRWPLPG 90 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEEEeCCCCC
Confidence 478999998653222 23577876554322221111 1223456789999999999999843 2
Q ss_pred ---CCCceEEEECC
Q 017284 143 ---DSSREFWFQTP 153 (374)
Q Consensus 143 ---~~s~~~~F~T~ 153 (374)
.||+...++|.
T Consensus 91 ~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 91 HWSDWSPSLELRTT 104 (105)
T ss_dssp CCCCCCCCEEECCC
T ss_pred CCcCCCCCEEEeCC
Confidence 46677777763
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.0014 Score=47.60 Aligned_cols=73 Identities=11% Similarity=0.134 Sum_probs=39.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC-------ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS-------NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~-------~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
.+|..|.+.... .+++.|.|..+..... -.|+|....+....... . . ....-...+.+.+|+|
T Consensus 3 ~~P~~l~v~~~~--~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~-~-~------~~~~~~~~~~i~~L~p 72 (101)
T d1iarb2 3 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIY-N-V------TYLEPSLRIAASTLKS 72 (101)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEE-E-E------CSSCCEEEECC-----
T ss_pred ccCCcCEEEEEe--CCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeee-e-e------ccCccceEEEECCCCC
Confidence 568777776544 4799999997743321 25777766553332211 0 0 0122345678999999
Q ss_pred CCEEEEEeCC
Q 017284 132 DTKYYYKIGD 141 (374)
Q Consensus 132 ~t~Y~Y~v~~ 141 (374)
+|.|.+||..
T Consensus 73 ~t~Y~~rVrA 82 (101)
T d1iarb2 73 GISYRARVRA 82 (101)
T ss_dssp CCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999953
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.0013 Score=46.71 Aligned_cols=71 Identities=18% Similarity=0.336 Sum_probs=45.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..++++--. .+++.|.|..+... ..-.|+|....+....... .. ..-...++|.||+|||.|.+
T Consensus 3 d~P~~l~v~~~s--~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~ 70 (90)
T d1tena_ 3 DAPSQIEVKDVT--DTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI----DL------TEDENQYSIGNLKPDTEYEV 70 (90)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE----EE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE----Ee------cCCcceeeEeeecCCCEEEE
Confidence 367788887543 58999999976433 2346788776543222111 11 11223568999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 71 ~V~a 74 (90)
T d1tena_ 71 SLIS 74 (90)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00074 Score=50.44 Aligned_cols=88 Identities=20% Similarity=0.224 Sum_probs=52.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.+...+...++++|.|.-...... -.|+|+...+..+..... ....+-...+.|++|+|++.
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcE
Confidence 467778877655556889999986532222 356676655433211100 01122334678999999999
Q ss_pred EEEEeCC------C---CCCceEEEECCC
Q 017284 135 YYYKIGD------G---DSSREFWFQTPP 154 (374)
Q Consensus 135 Y~Y~v~~------~---~~s~~~~F~T~p 154 (374)
|.+||.. + .+|....++|+.
T Consensus 78 Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 78 YVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 9999842 2 245677888754
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.13 E-value=0.0016 Score=46.73 Aligned_cols=71 Identities=14% Similarity=0.322 Sum_probs=45.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+..-. .++++|+|.-+... ..-.|+|....+..... .... ..-...++++||+|+|+|..
T Consensus 5 ~~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~------~~~~----~~~~~~~~i~~L~p~t~Y~v 72 (93)
T d1tdqa1 5 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFRL----QPPLSQYSVQALRPGSRYEV 72 (93)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEEE----CTTCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCcceee------EEEe----CCCceEEEEeCcccceEEEE
Confidence 468888887654 47899999865433 23467787765432211 1110 11123468999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 73 ~V~a 76 (93)
T d1tdqa1 73 SISA 76 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=97.11 E-value=0.0011 Score=48.31 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=44.6
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+.+|..+.++.+. +++.|+|.-+...+ .-.|+|................. -...+.+++|+|+|
T Consensus 6 P~~P~~~~v~~~~---~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~L~p~t 73 (100)
T d1cfba1 6 PNAPKLTGITCQA---DKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP---------NTDSSFVVQMSPWA 73 (100)
T ss_dssp CCCCEEEEEEECS---SEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE---------TTCSEEEEECCSSE
T ss_pred CCcCcCcEEEEcC---CEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecC---------CceEEEEecCCCCC
Confidence 3578888887653 67999998664332 23677776654433222211110 11224677999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 74 ~Y~frV~A 81 (100)
T d1cfba1 74 NYTFRVIA 81 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.0011 Score=48.95 Aligned_cols=77 Identities=12% Similarity=0.013 Sum_probs=44.5
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+..-. .++++|.|.-....+. ..|+|.............. .... .........|+||+|+|
T Consensus 11 P~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~v~~L~p~t 83 (111)
T d1wisa1 11 PGPPTNLGISNIG--PRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-HQLS----NEPDARSMEVPDLNPFT 83 (111)
T ss_dssp CCCCEEEEEESCC--SSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-EEEE----SCTTCSEEEECSCCTTS
T ss_pred CcCCCCCEEEEcC--CCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee-eeee----cccceeEEEeCCCCCCC
Confidence 3578888877433 5789999986543222 2566665443322111111 1110 11223346789999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 84 ~Y~frV~A 91 (111)
T d1wisa1 84 CYSFRMRQ 91 (111)
T ss_dssp EECCCCEE
T ss_pred EEEEEEEE
Confidence 99999853
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00086 Score=49.42 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=52.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.+...+ .+++.|.|....... .-.|+|............-. . ........++.|++|+|+
T Consensus 10 ~pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~i~~L~p~ 81 (109)
T d1va9a1 10 GPPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--E----MKATGDSEVYTLDNLKKF 81 (109)
T ss_dssp SCCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--B----CCCCSSEEEEEEESCCSS
T ss_pred CCCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--E----EecCCCeeEEEECCCCcc
Confidence 468888877554 589999999763221 12567766554322110000 0 001223456789999999
Q ss_pred CEEEEEeCC------CCCCceEEEECC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
|.|.+||.. +.+|....++|+
T Consensus 82 t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 82 AQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred eEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 999999853 345666667664
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.09 E-value=0.0013 Score=46.40 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=44.2
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|..++++.-. .+++.|.|..+... ..-.|+|........ . ... +.-...++|+||+|+|.|.++
T Consensus 2 aP~~l~v~~~t--~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~-~-----~~~------~~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGKKN-E-----MEI------PVDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCCEE-E-----EEE------CTTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEEec--CCEEEEEEECCCCCcceeEEEeecCCccee-E-----EeC------CCCcCEEEECCCCcCCEEEEE
Confidence 68888887544 58999999976433 234677876543211 1 111 112235689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.0019 Score=47.27 Aligned_cols=72 Identities=14% Similarity=0.269 Sum_probs=45.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..+.++.-+...+++.|+|..+.. .. .-.|+|.......+....- ........|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeecc-----------ccceEEEEECCCCCC
Confidence 568888887654445789999997632 11 1356677665433322110 112335689999999
Q ss_pred CEEEEEeCC
Q 017284 133 TKYYYKIGD 141 (374)
Q Consensus 133 t~Y~Y~v~~ 141 (374)
|.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999853
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.07 E-value=0.0012 Score=46.86 Aligned_cols=69 Identities=17% Similarity=0.257 Sum_probs=45.5
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|.++.+.... .+++.|+|..+... ..-.|+|....+....... . ......+.|+||+|+|.|.++
T Consensus 3 ~P~~l~v~~v~--~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y~~~ 69 (88)
T d1qr4a2 3 SPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----V------DGSKTRTKLVKLVPGVDYNVN 69 (88)
T ss_dssp CCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----E------ETTCCEEEECSCCSSCEEEEE
T ss_pred CCcceEEEEec--CCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----e------cCCccEEEECCCCCCCEEEEE
Confidence 57788777554 58899999866432 3346788876653332211 1 111235789999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 70 V~a 72 (88)
T d1qr4a2 70 IIS 72 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.05 E-value=0.0014 Score=48.39 Aligned_cols=70 Identities=11% Similarity=0.021 Sum_probs=43.7
Q ss_pred CCceEEEEEcCCCCCC----ceEEEeecCCC-CCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------
Q 017284 73 GKAVIISWVTPNELGS----NRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------ 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~~----~~V~y~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------ 141 (374)
.+++.|.|........ -.|+|....+. .+..+.-. ..-....+|++|+|+|.|.+||..
T Consensus 21 ~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~----------~~~~~~~~l~~L~p~t~Y~frVra~~~~g~ 90 (106)
T d1cd9b2 21 PGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----------PSSKDQFELCGLHQAPVYTLQMRCIRSSLP 90 (106)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----------ESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred CCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecc----------cCCceEEEEeccCCCeEEEEEEEEEeCCCC
Confidence 4789999986543322 26888765443 33222211 112455679999999999999843
Q ss_pred C---CCCceEEEEC
Q 017284 142 G---DSSREFWFQT 152 (374)
Q Consensus 142 ~---~~s~~~~F~T 152 (374)
| .||...+|+|
T Consensus 91 g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 91 GFWSPWSPGLQLRP 104 (106)
T ss_dssp CCCCCCCCCEEECC
T ss_pred CCCcCCCCCeEecC
Confidence 2 3566677765
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00095 Score=48.32 Aligned_cols=69 Identities=13% Similarity=0.205 Sum_probs=46.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
.+|+.+.+.... .+++.|+|..+... -.-.|+|....+....... . . ....++|.+|+|+|.|.
T Consensus 4 ~~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t~Y~ 69 (95)
T d2b5ic1 4 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V---------D--YRHKFSLPSVDGQKRYT 69 (95)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E---------C--SSCEEEECSCCTTSCEE
T ss_pred cCCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e---------c--ccceeEcCCCCCCCEEE
Confidence 578888887554 47899999976432 1336788776654332211 1 1 12367899999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
+||..
T Consensus 70 frVRa 74 (95)
T d2b5ic1 70 FRVRS 74 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.05 E-value=0.0011 Score=47.80 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=42.7
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCC-----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGS-----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~-----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.|..+.+..-. .+++.|.|..+..... -.|+|+...+....... .. .........|+||+|+|.
T Consensus 9 ~P~~~~v~~~s--~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~t~ 77 (95)
T d2ibga1 9 VPELLEIEEYS--ETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA----TI-----EGAHARSFKIAPLETATM 77 (95)
T ss_dssp CCEECCCBCCS--SSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE----EE-----ECTTCCEEEECSCCTTCE
T ss_pred CCcCeEEEEeC--CCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee----ec-----cCCceeEEEEeeccCCeE
Confidence 46555555433 5899999986532221 25788876543221111 00 011234568999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 78 Y~~~V~A 84 (95)
T d2ibga1 78 YEFKLQS 84 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0014 Score=46.90 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=49.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.+|..+.+..-. .+++.|+|..+... ..-.|+|....+.. .. ... ......++|+||+|||.|.+
T Consensus 3 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~-~~-----~~~------~~~~~~~~i~~L~p~t~Y~~ 68 (93)
T d2cuma1 3 EAPRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGGQT-QE-----ILL------PGGITSHQLLGLFPSTSYNA 68 (93)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTSCE-EE-----EEE------CSSCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccccccEEEEEEcccccc-EE-----EEE------CCCccEEEEeCccCCCEEEE
Confidence 457777666433 58999999976433 34567787654311 11 111 11223568999999999999
Q ss_pred EeCC---CCCC--ceEEEECCC
Q 017284 138 KIGD---GDSS--REFWFQTPP 154 (374)
Q Consensus 138 ~v~~---~~~s--~~~~F~T~p 154 (374)
+|.. .+.| ....|+|..
T Consensus 69 ~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 69 RLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCCCCCCEEEEEEeCC
Confidence 9853 1222 245677754
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0021 Score=45.61 Aligned_cols=70 Identities=17% Similarity=0.319 Sum_probs=44.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
.|..++++.-. .+++.|.|...... ..-.|+|....+....... .. ..-...++|+||+|+|.|.+
T Consensus 3 pP~~l~~~~~~--~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~ 70 (91)
T d1fnfa2 3 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----SI------SPSDNAVVLTNLLPGTEYVV 70 (91)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE----EE------CTTCCEEEECSCCTTCEEEE
T ss_pred cCCceEEEEeC--CCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE----Ee------CCCceEEEEeceeCCCEEEE
Confidence 36677776433 58999999876322 2236788876553322110 10 11233578999999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
+|..
T Consensus 71 ~V~a 74 (91)
T d1fnfa2 71 SVSS 74 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.0029 Score=46.51 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=49.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p 131 (374)
..|..+.++.-....+++.|.|..+.... .-.++|...++..+..+.. . ....++|.+|+|
T Consensus 9 ~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~----------~--~~~~~~i~~L~~ 76 (109)
T d1uc6a_ 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------S--NGTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------S--SCSEEEETTCCS
T ss_pred CCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc----------C--CceeEEeCCCCC
Confidence 46888888754434578999999864221 1245566555433322211 0 123467899999
Q ss_pred CCEEEEEeCC-----C---CCCceEEEEC
Q 017284 132 DTKYYYKIGD-----G---DSSREFWFQT 152 (374)
Q Consensus 132 ~t~Y~Y~v~~-----~---~~s~~~~F~T 152 (374)
+|.|.+||.. + .||.....+|
T Consensus 77 ~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 77 GKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 9999999954 1 3555555544
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.00083 Score=49.80 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=50.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..+.++.+ .++++|.|.-+.... .-.|+|....+. +...... .......++++||+|+|.
T Consensus 9 sPP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~---------~~~~~~~~~i~~L~p~t~ 75 (108)
T d1v5ja_ 9 SPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPA---------VAGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEE---------ECSSCCEEECCCCCTTSC
T ss_pred CcCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeee-eeecccc---------ccceeeeEEEEeccCCcE
Confidence 45777776653 478999999653322 236778765532 2121111 011234667999999999
Q ss_pred EEEEeCCC------CCCceEEEECCCC
Q 017284 135 YYYKIGDG------DSSREFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~~------~~s~~~~F~T~p~ 155 (374)
|.|||..- ..|....++|+..
T Consensus 76 Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 76 YEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 99998641 3455556666543
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.93 E-value=0.0016 Score=45.93 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=44.6
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC-CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG-SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|..+.++.-. .+++.|.|..+...- .-.|+|....+..... .. ..-.-++.|+||+|||.|.++
T Consensus 3 ~P~nl~v~~~~--~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~------~~------~~~~~~~~~~~L~p~t~Y~v~ 68 (86)
T d1tdqa3 3 SPRDLMVTASS--ETSISLIWTKASGPIDHYRITFTPSSGISSEV------TV------PRDRTSYTLTDLEPGAEYIIS 68 (86)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEEECSSSCCEEE------EE------ESSCSEEEECCCCTTCCEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEeCCCCCccceEEEEecccccceEE------Ee------CCCccEEEECCCccccEEEEE
Confidence 57778887654 588999998865332 3467887655422111 10 011235789999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 69 V~a 71 (86)
T d1tdqa3 69 ITA 71 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.91 E-value=0.001 Score=48.44 Aligned_cols=71 Identities=17% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
.+|..+.++... .++++|.|.-+...+ .-.|+|...++..+..+.. .......++++||+||+
T Consensus 3 ~~P~~~~v~~~~--~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~ 70 (98)
T d1x5ya1 3 SAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGA 70 (98)
T ss_dssp CCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTC
T ss_pred CCCcCcEEEEcc--CCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCe
Confidence 467778777544 478999998653221 2367787766543322110 01112245789999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 71 ~Y~frV~A 78 (98)
T d1x5ya1 71 RILFRVVG 78 (98)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0034 Score=44.36 Aligned_cols=70 Identities=24% Similarity=0.241 Sum_probs=43.5
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC-CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG-SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~-~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|..+.++.-. .+++.|.|..+.... ...++|............ .. ..-.-..+|+||+|||.|.+|
T Consensus 2 pP~~l~~~~v~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~~ 69 (90)
T d1fnha1 2 APTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYEVS 69 (90)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE----EE------CTTCCEEEECSCCTTCEEEEE
T ss_pred CCCCEEEEEec--CCEEEEEEEccceeccceEEEEEeeeCCCceEEE----Ee------CCCCeEEEEecccCceEEEEE
Confidence 36677776554 589999999864332 345677665443221110 00 011224689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 70 V~a 72 (90)
T d1fnha1 70 VYA 72 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.00063 Score=51.55 Aligned_cols=89 Identities=22% Similarity=0.326 Sum_probs=51.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC---C---CceEEEeecCCCCC---ceEEeEEEEEEeecccccEEEEEEeCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL---G---SNRVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~---~---~~~V~y~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~v~l~gL 129 (374)
..|+.|.+..-. .+++.|.|...... . ...+.|........ .......... ..-...++|++|
T Consensus 16 ~~P~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L 87 (125)
T d1uena_ 16 VAPGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGL 87 (125)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESC
T ss_pred CCCcccEEEEec--CCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEe------CCCccEEEECCC
Confidence 457778877544 47999999865311 1 12344444332211 1111111111 112346889999
Q ss_pred CCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 130 EYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 130 ~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
+|+|.|.+||.. +.+|....|+|++.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 999999999853 24677789999764
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.00095 Score=49.19 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=41.2
Q ss_pred CCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------
Q 017284 73 GKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------ 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------ 141 (374)
.+++.|+|..+...+ .-.|+|.............. .-.....++||+|||+|.+||..
T Consensus 25 ~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~ 93 (107)
T d2crma1 25 SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----------GATREHLCDRLNPGCFYRLRVYCISDGGQ 93 (107)
T ss_dssp TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----------SSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred CCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec-----------CCccEEEEeccCCCCEEEEEEEEECCCcC
Confidence 478999998653221 23456655444332221111 01123579999999999999853
Q ss_pred CCCCceEEEECC
Q 017284 142 GDSSREFWFQTP 153 (374)
Q Consensus 142 ~~~s~~~~F~T~ 153 (374)
+.+|+...++|+
T Consensus 94 s~~S~~v~v~Tp 105 (107)
T d2crma1 94 SAVSESLLVQTP 105 (107)
T ss_dssp CCCCCCCCCCCC
T ss_pred cCCCCcEEEECC
Confidence 345666666664
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.00067 Score=48.22 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=44.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|..+.+..-. .+++.|+|.-+... ..-.|+|...++..... .- ....-...++|+||+|||.|.++
T Consensus 3 aP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~L~p~t~Y~~~ 70 (89)
T d1fnha3 3 APSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPREV-VP---------RPRPGVTEATITGLEPGTEYTIY 70 (89)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCEEC-TT---------CCCTTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCccEE-EE---------EcCCCccEEEEEeeeCCCEEEEE
Confidence 57788887554 48999999976432 23467787765422100 00 00112235689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 71 V~a 73 (89)
T d1fnha3 71 VIA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.85 E-value=0.0024 Score=47.21 Aligned_cols=73 Identities=23% Similarity=0.351 Sum_probs=41.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|..+.++.-. .+++.|+|.-....+ .-.|+|.............. . .......++++||+|+|.
T Consensus 12 ~~P~~~~v~~~~--~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--~------~~~~~~~~~v~~L~p~t~ 81 (108)
T d1x4za1 12 EAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--A------IPPSRLSVEITGLEKGIS 81 (108)
T ss_dssp CCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--E------ECTTCCEEEEESCCTTCE
T ss_pred ccCCCCEEEEcc--CCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--e------ecCCccEEEECCCCCCCE
Confidence 345556665433 478999995433222 23567776554322221111 0 011233467899999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 82 Y~frV~A 88 (108)
T d1x4za1 82 YKFRVRA 88 (108)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0018 Score=49.07 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=46.5
Q ss_pred CCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC------CC
Q 017284 73 GKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------GD 143 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~------~~ 143 (374)
.+++.|+|.-+.... .-.|.|.......... .-.... .........+|+||+|+|.|.+||.. +.
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~-~~~~~~-----v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~ 102 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATS-SWQNLD-----AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTT-CCEEEE-----CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCCc-ceEEEE-----eccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence 588999998764322 2357776654321100 000000 01122345678999999999999842 34
Q ss_pred CCceEEEECCCCC
Q 017284 144 SSREFWFQTPPKI 156 (374)
Q Consensus 144 ~s~~~~F~T~p~~ 156 (374)
.|....++|++..
T Consensus 103 ~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 103 DSESKTVRTTEES 115 (120)
T ss_dssp CCCCEEEEECSSC
T ss_pred CCCCEEEEeCCCC
Confidence 6778889998753
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0035 Score=44.98 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=45.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
..|..++++...+ .+++.|.|...... ..-.|+|....+....... ... ......++|+||+|||.|.
T Consensus 3 ~PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~Y~ 72 (94)
T d1fnfa1 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVV------HADQSSCTFDNLSPGLEYN 72 (94)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EEE------CTTCCEEECCCCCTTSCEE
T ss_pred CcCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE---EEe------CCCccEEEECCCCCCCEEE
Confidence 3578888875443 35689999876432 2345778866543221111 111 1123467899999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
.+|..
T Consensus 73 v~V~a 77 (94)
T d1fnfa1 73 VSVYT 77 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99854
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.00098 Score=49.29 Aligned_cols=82 Identities=16% Similarity=0.264 Sum_probs=48.5
Q ss_pred CCceEEEEeeCC----CCCceEEEEEcCCCCC--------CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeC
Q 017284 60 APQQVRITQGDY----DGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (374)
Q Consensus 60 ~p~~v~lt~~~d----~~~~~~v~W~t~~~~~--------~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~ 127 (374)
.|..+.++.-.. ...++.|+|.-+.... .-.|+|+..++..+..... . ...+++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~--~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP----------I--LTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC----------B--SSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee----------c--ccceEEEC
Confidence 466676664321 1357999999763221 1245666665443322110 1 12357799
Q ss_pred CCCCCCEEEEEeCC--------CCCCceEEEECC
Q 017284 128 DLEYDTKYYYKIGD--------GDSSREFWFQTP 153 (374)
Q Consensus 128 gL~p~t~Y~Y~v~~--------~~~s~~~~F~T~ 153 (374)
+|+|+|.|.+||.. +.||+....+||
T Consensus 71 ~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 71 SLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 99999999999843 245666666664
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.007 Score=45.68 Aligned_cols=86 Identities=17% Similarity=0.171 Sum_probs=49.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCCc----eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~----~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|..|.+.... .+++.|.|.-....... .++|............... ........+.+|+|++.
T Consensus 18 ~~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~L~p~t~ 86 (127)
T d1ueya_ 18 NPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------VSGTQTTAQLNLSPYVN 86 (127)
T ss_dssp CCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE---------EESSCCEEEECCCTTCE
T ss_pred cCCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee---------cCCceEEEECCCccCCE
Confidence 568888877554 47899999866443322 3455544433222111110 01222356789999999
Q ss_pred EEEEeCC------CCCCc-eEEEECCCC
Q 017284 135 YYYKIGD------GDSSR-EFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~------~~~s~-~~~F~T~p~ 155 (374)
|.+||.. +.+|. ...++|.+.
T Consensus 87 Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 87 YSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 9999853 23333 245667654
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.71 E-value=0.0052 Score=45.04 Aligned_cols=69 Identities=20% Similarity=0.359 Sum_probs=37.0
Q ss_pred CCceEEEEEcCCCCCCc----eEEEeecCCCC-CceEEeEEEEEE-eecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNELGSN----RVQYGKLEKKY-DSSAEGTVTNYT-FYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~~~----~V~y~~~~~~~-~~~~~g~~~~~~-~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.++++|+|..+...+.. .|+|....... +........... ............+|+||+|+|+|.+||..
T Consensus 13 ~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 13 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 47999999987544333 45666544322 222221111000 01112334567799999999999999864
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0035 Score=44.47 Aligned_cols=69 Identities=17% Similarity=0.230 Sum_probs=44.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.|..+.++.-. .+++.|+|.-+... ..-.|+|....+...... .. ..-.....|+||+|||.|.++
T Consensus 4 pP~~l~v~~~~--~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----EC------CTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----ec------CCCccEEEeCCCCCCcEEEEE
Confidence 47788887544 58999999965433 344677876654222111 10 112335689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.69 E-value=0.00076 Score=56.70 Aligned_cols=64 Identities=22% Similarity=0.261 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSL-STLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~-~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|+.++||+|...... ..++.+.. .+.|.++++||++..+.. . . +.++ +....-+..+.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~-----s---~---~vl~-~l~~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAE-----N---V---ECLE-LITFPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSC-----H---H---HHHG-GGGSTTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCcc-----H---H---HHHH-HhhccccccccCcHHHH
Confidence 788999999764332 22333322 256899999999963321 0 1 1222 22344678999999964
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.0019 Score=48.40 Aligned_cols=84 Identities=10% Similarity=0.188 Sum_probs=48.6
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|..+.+..-. .+++.|.|..+.... .-.|+|............ ... ........|+||+|+|
T Consensus 21 P~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t 89 (117)
T d1wfoa1 21 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVL------APSARQYTATGLKPES 89 (117)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEE------CTTCCEEEEESCCSSS
T ss_pred CcCCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---Eec------CCceEEEEECCCCCCC
Confidence 4567777777544 478999998654322 225777665543221111 010 0112245689999999
Q ss_pred EEEEEeCCC------CCCceEEEEC
Q 017284 134 KYYYKIGDG------DSSREFWFQT 152 (374)
Q Consensus 134 ~Y~Y~v~~~------~~s~~~~F~T 152 (374)
.|.+||..- .+|....++|
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 90 VYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEEEEEECCCcCCCCcCCEEEEC
Confidence 999998531 2344455555
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.0024 Score=45.75 Aligned_cols=69 Identities=10% Similarity=0.034 Sum_probs=41.7
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
|..+.+..-. .+++.|.|..+... ..-.|+|....+...... .. ...-...++|+||+|||.|.++
T Consensus 9 P~~l~v~~~t--~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~t~~~i~~L~p~t~Y~~~ 76 (95)
T d2fnba_ 9 LTDLSFVDIT--DSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DF------VDSSVGYYTVTGLEPGIDYDIS 76 (95)
T ss_dssp CTTCEEECCC--SSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE----EE------CCSSCSEEEECCCCTTSEEEEE
T ss_pred CCCeEEEEEc--CCEEEEEEEecCCceEEeEEEEEEEeeccceEEE----EE------eCCCCeEEEEecccCCEEEEEE
Confidence 5667766443 58899999865322 223577766554222111 00 0112335689999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 77 V~a 79 (95)
T d2fnba_ 77 VIT 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0018 Score=47.11 Aligned_cols=76 Identities=17% Similarity=0.323 Sum_probs=43.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|..+.+..-. .+++.|+|.-+..... -.|+|......... .+........ ..-...++++||+|+|.
T Consensus 4 ~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~i~~L~p~t~ 76 (103)
T d1qg3a2 4 SEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRP--IGPMKKVLVD---NPKNRMLLIENLRESQP 76 (103)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCB--CSCCEEEEEC---CTTCCEEEECCCCTTCC
T ss_pred ccCCCcEEEEec--CCEEEEEEEECccCCCCceEEEEEeecccccccc--ccceEEEEec---CCCceEEEEeecCCCCE
Confidence 356677776544 4789999997643322 24666655432211 1111111111 11123678999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 77 Y~~~V~A 83 (103)
T d1qg3a2 77 YRYTVKA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0043 Score=46.40 Aligned_cols=85 Identities=24% Similarity=0.426 Sum_probs=50.8
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC--CCCce----EEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNR----VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~--~~~~~----V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..|.+.... .+++.|.|..... ..... |+|....+. ...... ........+.|+||+|+
T Consensus 13 ~~P~~v~~~~~~--~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~ 80 (119)
T d1x5ha1 13 AAPQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRG 80 (119)
T ss_dssp CCCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSS
T ss_pred CCCcCeEEEEec--CcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cceeee----ecCCCccEEEeCCCCCC
Confidence 458888877554 4789999986531 11122 344433210 000000 01122346789999999
Q ss_pred CEEEEEeCC------CCCCceEEEECCCC
Q 017284 133 TKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 133 t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
|.|.+||.. |.+|....|+|.+.
T Consensus 81 t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 81 TEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 999999853 23677888999764
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.0025 Score=46.49 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=36.1
Q ss_pred CCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.++++|+|..+...+ ...++|.......+..... ........+++||+|+|.|.|||..
T Consensus 16 ~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 16 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCEEEEEEEE
Confidence 478999998653221 2456776655433221110 1112234678999999999999964
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.32 E-value=0.0025 Score=47.89 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=26.2
Q ss_pred EEEeCCCCCCCEEEEEeCC------CCCCceEEEECCCCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPKI 156 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~~ 156 (374)
..+|++|+|+|.|.+||.. +.+|+...++|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 3578999999999999854 235778889886543
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0073 Score=42.88 Aligned_cols=70 Identities=19% Similarity=0.308 Sum_probs=43.9
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
+|.++.++--. .+++.|.|..+... ..-.++|....+... .... .........+++||+|+|.|.++
T Consensus 4 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-------~~~~---~~~~~~~~~~i~~L~p~t~Y~~~ 71 (94)
T d1j8ka_ 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIH-------ELFP---APDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEE-------EECC---CCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCc-------eEEE---ecCCCccEEEECCCCCCCEEEEE
Confidence 57778877443 47999999865432 344677776553111 0000 01223446789999999999999
Q ss_pred eCC
Q 017284 139 IGD 141 (374)
Q Consensus 139 v~~ 141 (374)
|..
T Consensus 72 V~a 74 (94)
T d1j8ka_ 72 VVA 74 (94)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0029 Score=48.77 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEeCC------CCCCceEEEECCCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 155 (374)
.++|+||+|+|.|.+||.. +.+|+...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 5689999999999999853 34677888999754
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0044 Score=45.99 Aligned_cols=82 Identities=12% Similarity=0.193 Sum_probs=49.4
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|..+++..+. +++.|.|.-+...+. -.|+|+...... .. ... ..-....+|.+|+|+|.
T Consensus 22 ~~P~~~~~~~~~---~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~-~~-----~~~------~~~~~~~~i~~L~p~t~ 86 (113)
T d1x5ia1 22 EVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGSPHA-QT-----IKV------DYKQRYYTIENLDPSSH 86 (113)
T ss_dssp CSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSCGGG-EE-----EEC------CTTCCEEEECSCCSSCE
T ss_pred CCCEeeeeeeCC---CEEEEEEEccccCCccEEEEEEEeeeccccc-ee-----eee------eCCccEEEEeccccCcE
Confidence 578888887653 689999996643322 256666543211 11 110 11233567999999999
Q ss_pred EEEEeCCC---CCCc--eEEEECCCC
Q 017284 135 YYYKIGDG---DSSR--EFWFQTPPK 155 (374)
Q Consensus 135 Y~Y~v~~~---~~s~--~~~F~T~p~ 155 (374)
|.+||..- +.++ .-.++|.|.
T Consensus 87 Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 87 YVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp ECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 99998531 2221 345777764
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0039 Score=45.05 Aligned_cols=76 Identities=16% Similarity=0.190 Sum_probs=43.4
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCCCCceEE--eEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAE--GTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
.|+.|+++--. .+++.|.|..+... ....|+|............ ....... ..+.....+|+||+|+|+|.
T Consensus 6 ~~~~l~v~~~t--~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~ 79 (101)
T d2cuia1 6 RLSQLSVTDVT--TSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 79 (101)
T ss_dssp CCCCCEEESCC--SSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCcEEEEEC--CCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEE
Confidence 56667777543 57899999755322 2346777765432211100 1101111 01123455789999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
++|..
T Consensus 80 ~~V~a 84 (101)
T d2cuia1 80 LTLYG 84 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.013 Score=41.50 Aligned_cols=58 Identities=22% Similarity=0.480 Sum_probs=36.4
Q ss_pred CCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.+++.|+|.-+...+ .-.|+|.......+.... .. . .....+|+||+|+|.|.+||..
T Consensus 13 ~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~~----~--~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 13 MNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG----K--DDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp TTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE----T--TCCEEEEECCCTTCEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----cC----C--CccEEEEEccCCeeEEEEEEEE
Confidence 478999999764332 235777766543332211 11 1 1224578999999999999864
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.0061 Score=43.16 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=37.0
Q ss_pred CCceEEEEEcCCCC-CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 73 GKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 73 ~~~~~v~W~t~~~~-~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.+++.|.|..+... ..-.|+|....+....... .. +.-...++|+||+|||.|.++|..
T Consensus 10 ~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 10 PTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF----TV------PGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp SSCEEEECCCCSSCCSEEEEEEEETTCCSCCEEE----EE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEEEEccceEecEEEEEEEcCCCCceeEEE----Ee------CCCccEEEeCCCCCCCEEEEEEEE
Confidence 57899999865432 2346788776543321110 11 011235789999999999999853
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.75 E-value=0.0094 Score=44.40 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=39.3
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCC----ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~----~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
.|..+.+..-. .++++|+|.-....+. -.|+|............. . . . -....+|+||+|+|.|
T Consensus 18 pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~--~---~--~~~~~~v~~L~p~t~Y 85 (117)
T d1uema_ 18 PPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA---N--H---V--KTTLYTVRGLRPNTIY 85 (117)
T ss_dssp CCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE---E--E---E--CSSEEEECSCCTTCEE
T ss_pred CCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec---c--c---c--ccccceECCCCCCCEE
Confidence 56666666433 4789999974432222 245665544321111000 0 0 0 1124578999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.+||..
T Consensus 86 ~frV~A 91 (117)
T d1uema_ 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.62 E-value=0.022 Score=41.32 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=43.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCC--CC----CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPN--EL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~--~~----~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..|.+.... .++++|+|.-.. .. ..-.|+|............ .. ........+|++|+|+
T Consensus 6 ~~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 6 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN----NI-----FDWRQNNIVIADQPTF 74 (105)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE----EE-----CCTTCCEEEECSCCSS
T ss_pred CCCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE----Ee-----cCCCccEEEECCCCCC
Confidence 467778876554 578999997421 11 1235677665433221110 00 1122346689999999
Q ss_pred CEEEEEeCC
Q 017284 133 TKYYYKIGD 141 (374)
Q Consensus 133 t~Y~Y~v~~ 141 (374)
|.|.+||..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.56 E-value=0.011 Score=43.13 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=42.2
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|..+.+.--. .+++.|.|..+.... .-.|+|.......... ... ...-.....|+||+|+|.
T Consensus 12 ~~p~~l~~~~~~--~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~----~~~------~~~~~~~~~i~~L~p~t~ 79 (106)
T d1wfna1 12 GPVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THY------LPNVTLEYRVTGLTALTT 79 (106)
T ss_dssp CCCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEE------ECSSCCEEEEESCCTTCE
T ss_pred cCCCCcEEEEec--CCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceE----EEe------cCCCeeEEEEccCCCCCE
Confidence 467777776443 478999998654332 2346666554321110 000 011233567899999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 80 Y~~~V~A 86 (106)
T d1wfna1 80 YTIEVAA 86 (106)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999863
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.30 E-value=0.17 Score=43.09 Aligned_cols=173 Identities=16% Similarity=0.091 Sum_probs=91.0
Q ss_pred CCcEEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 160 APYTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
..+|++++||.=....- ...|..+.+. ++||||..|-++.....-. . +.+.+++ ...+- +.+.|||
T Consensus 3 ~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git---~---k~~~eL~---~~GvD-vIT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS---L---KHYEFLK---EAGVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC---H---HHHHHHH---HHTCC-EEECCTT
T ss_pred ccceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCC---H---HHHHHHH---HhCCc-EEEcCch
Confidence 46899999998433211 1224455555 9999999999986432211 1 2222222 22344 3589999
Q ss_pred ccccCCCCCCcccccccccccccCcCC----C-CCCCCceEEEecCCEEEEEEeCCCC-CC---CChHHHHHHHHHHhhc
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTA----S-KSTNPLWYAIRRASAHIIVLSSYSP-YV---KYTPQWWWLREELKKV 306 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~----~-~~~~~~~ysf~~g~v~fi~Ldt~~~-~~---~~~~Q~~WL~~~L~~~ 306 (374)
=++.. +...|-.-..+.-.|.+- + +..+.-|..++.++..+.+++--.. +. .......=+++.+.+
T Consensus 73 ~wd~k----ei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~- 147 (281)
T d1t71a_ 73 TWFQK----LDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK- 147 (281)
T ss_dssp TTCCG----GGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT-
T ss_pred hhhch----hhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc-
Confidence 76421 100000011122233332 2 2234457888887756666554211 11 111222334444443
Q ss_pred cCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 307 DREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 307 ~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
.+++.+||=+|.= ......+| -.+-+-+|.+|+.=|+|.-.
T Consensus 148 --~~~d~i~VDfHaE-----------ATSEK~A~-g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 148 --RDCDLHIVDFHAE-----------TTSEKNAF-CMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp --CCCSEEEEEEECS-----------CHHHHHHH-HHHHTTTSSEEEEESSSSCC
T ss_pred --cCCCeEEEEeccc-----------hhhhhhhh-eeeeCCcEEEEEecCccccc
Confidence 5677889889932 11222222 35557789999999999843
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.22 E-value=0.36 Score=40.39 Aligned_cols=168 Identities=15% Similarity=0.181 Sum_probs=88.3
Q ss_pred cEEEEEecCCCCCCcHHH----HHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSLST----LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~----l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=.... ..+ |..+ +.+.||||..|.++-....-. . +.+.+++ ...+- ..+.|||=+
T Consensus 1 MkiLfiGDIvG~~G-r~~v~~~Lp~L-k~~~DfVIaNgENaa~G~Git---~---k~~~~L~---~~GVD-vIT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDVMAEPG-LRAVGLHLPDI-RDRYDLVIANGENAARGKGLD---R---RSYRLLR---EAGVD-LVSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHH-HHHHHHHHHHH-GGGCSEEEEECTTTTTTSSCC---H---HHHHHHH---HHTCC-EEECCTTTT
T ss_pred CeEEEEeccCCHHH-HHHHHHHhHHH-HhhCCEEEEeeeccCCCcCCC---H---HHHHHHH---HhCCC-EEEcCcccc
Confidence 48999999844322 222 2333 237899999999985432211 2 2222222 22344 358999987
Q ss_pred ccCCCCCCcccccccccccccCcCCC-CCCCCceEEEecCCEEEEEEeC--CCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTAS-KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~-~~~~~~~ysf~~g~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
+.. +...|-. ..+.-.|.+-+ +..+.-|+.|+.++..+.+++- ..-......-..=+++.|++ .+++.+
T Consensus 69 dkk----ei~~~i~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHK----EVYALLE-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCT----THHHHHH-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cch----hhhhhhc-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 421 1111111 11222344432 2244567888888866666654 21111111112223334444 456778
Q ss_pred EEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 315 iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
||=+|.= ......+ .-.+-.-+|.+|+.=|+|.-.
T Consensus 141 ~VDfHaE-----------aTSEK~A-~g~~ldGrvsavvGTHTHV~T 175 (252)
T d2z06a1 141 LVEVHAE-----------ATSEKMA-LAHYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp EEEEECS-----------CHHHHHH-HHHHHBTTBSEEEEESSCSCB
T ss_pred EEEcccc-----------hhhhhee-eeEecCCCEEEEEecCccccc
Confidence 8889932 1122222 234556789999999999843
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.07 E-value=0.016 Score=41.63 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=37.8
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
|-.|+++.++ +++.|.|..+.... .-.|+|....+......... . .-...++|.+|+|+|.|
T Consensus 8 Pp~l~v~~~~---~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--~--------~~~~~~~l~~L~p~t~Y 74 (100)
T d2gysa4 8 PPSLQVTKDG---DSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET--L--------QNAHSMALPALEPSTRY 74 (100)
T ss_dssp CCEEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE--E--------ESCSEEECCCCCSSCCC
T ss_pred CCccEEEECC---CEEEEEEecCcccCCccceEEEEEEeecccceeceeecc--c--------CCceEEEeCCCCCCCeE
Confidence 4457776643 67999999875322 23577776554322111100 0 01235789999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.+||..
T Consensus 75 ~~rVRa 80 (100)
T d2gysa4 75 WARVRV 80 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.69 E-value=0.053 Score=39.15 Aligned_cols=78 Identities=8% Similarity=-0.008 Sum_probs=44.7
Q ss_pred CCCceEE-EEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVR-ITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~-lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
..|+.|. ++-. ..++++++|....... ...+.|.................. .........+.+++|+|++.
T Consensus 6 ~~P~~v~~i~~~--~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~ 80 (107)
T d1cd9b1 6 ASPSNLSCLMHL--TTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQY 80 (107)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSC
T ss_pred CCCcCCEEEEec--CCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCce
Confidence 5687777 3432 2478999998764333 234556554432111111000000 11223566788999999999
Q ss_pred EEEEeCC
Q 017284 135 YYYKIGD 141 (374)
Q Consensus 135 Y~Y~v~~ 141 (374)
|.+||..
T Consensus 81 Y~frV~A 87 (107)
T d1cd9b1 81 MAIWVQA 87 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.51 E-value=0.00095 Score=48.94 Aligned_cols=83 Identities=16% Similarity=0.172 Sum_probs=45.3
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeec----CCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKL----EKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
.|..|....-. .+++.|+|..+...+...+.|... .+..... ... .......+.+.+.+|+|++ |
T Consensus 7 ~P~~v~~~~~~--~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~----~~~----~~~~~~~~~~~~~~L~~~t-Y 75 (102)
T d2dtge1 7 IVGPVTHEIFE--NNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHL----CDT----RKHFALERGCRLRGLSPGN-Y 75 (102)
T ss_dssp CCCCCCCCSSS--SSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCC----CCC----SSSCCCTTCCCCCSCCSSE-E
T ss_pred CCCCCEEEEEC--CCEEEEEEEeCCCCcceEEEeeeEEEecCCCCcee----eee----eecccceEEEEEeccceee-E
Confidence 34444443332 478899998665444445555442 2111100 000 0011234456789999975 9
Q ss_pred EEEeCC------CCCCceEEEECC
Q 017284 136 YYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 136 ~Y~v~~------~~~s~~~~F~T~ 153 (374)
.+||.. +.+|....|.|+
T Consensus 76 ~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 76 SVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CCCCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEEEcCCccCCCCCCEEEEcc
Confidence 999853 356777788874
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=94.51 E-value=0.64 Score=38.92 Aligned_cols=170 Identities=15% Similarity=0.132 Sum_probs=89.6
Q ss_pred cEEEEEecCCCCCCc---HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS---LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||.=....- .+.|..+. ++.||||..|.++-....-+ . +.+.++++ ..+- ..+.|||=++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~G~Git---~---~~~~~l~~---~GvD-viT~GNH~wd 69 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAGGFGMH---R---DAARGALE---AGAG-CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTTTSSCC---H---HHHHHHHH---HTCS-EEECCTTTTS
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCCCCcCCC---H---HHHHHHHH---cCCc-EEEcCchhhc
Confidence 489999998433211 12233342 37899999999986432211 2 22222222 2344 3589999764
Q ss_pred cCCCCCCccccc-ccccccccCcCCC--CCCCCceEEEecCCEEEEEEeC--CCCCCCChHHHHHHHHHHhhccCCCCCe
Q 017284 239 FMPNMGEVIPFK-SYLHRIATPYTAS--KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 239 ~~~~~~~~~~~~-~y~~~f~~p~~~~--~~~~~~~ysf~~g~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
.. +...|- ....+.-.|.+-+ +..+..|+.++..+..+.+++- ..-......-..=+++.|++ .+.+.
T Consensus 70 kk----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~~ 142 (255)
T d1t70a_ 70 HK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLGT 142 (255)
T ss_dssp ST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCCE
T ss_pred ch----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCCe
Confidence 21 111110 1111233444422 2345667888887766666654 22111111122335555654 45667
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+||=+|.= ......+| -.+-.-+|.+|+.=|+|.-.
T Consensus 143 i~VDfHaE-----------aTSEK~A~-g~~ldGrvsav~GTHTHV~T 178 (255)
T d1t70a_ 143 VFVDFHAE-----------ATSEKEAM-GWHLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp EEEEEECS-----------CHHHHHHH-HHHHTTSSSEEEEESSCSCB
T ss_pred EEEEccch-----------hHHHHHHH-HhhhcCcEEEEEecCccccc
Confidence 88889932 22222232 34556789999999999843
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.94 E-value=0.0091 Score=44.90 Aligned_cols=22 Identities=18% Similarity=0.045 Sum_probs=18.0
Q ss_pred EEEEEEeCCCCCCCEEEEEeCC
Q 017284 120 YIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 120 ~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.....+|+||+|+|.|.++|..
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEE
T ss_pred ccCEEEECCCccCCEEEEEEEE
Confidence 3446789999999999999853
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.38 E-value=0.18 Score=35.32 Aligned_cols=72 Identities=11% Similarity=0.062 Sum_probs=40.7
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCCc--eEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGSN--RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~--~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
+|..|.+.... ..+++.|.-+...+.. .++|.......+........ .........+++|.+++.|++
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~Y~f 72 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACIN-------ISHHYCNISDHVGDPSNSLWV 72 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEE-------ESSSEEECGGGCCSTTSCEEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeeee-------cccceeeeEecccCCCCEEEE
Confidence 46777776543 3568999987544333 23343333322221111111 122344567889999999999
Q ss_pred EeCC
Q 017284 138 KIGD 141 (374)
Q Consensus 138 ~v~~ 141 (374)
||..
T Consensus 73 RV~A 76 (98)
T d1fyhb1 73 RVKA 76 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.33 E-value=0.11 Score=38.12 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=20.2
Q ss_pred EeCCCCCCCEEEEEeCC------CCCCceEEEECC
Q 017284 125 LVDDLEYDTKYYYKIGD------GDSSREFWFQTP 153 (374)
Q Consensus 125 ~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~ 153 (374)
.+.+|+|+|.|.+||.. +..|+...+.+.
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~ 109 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRI 109 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEecc
Confidence 45589999999999853 345665566443
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.08 E-value=0.11 Score=36.48 Aligned_cols=71 Identities=10% Similarity=0.094 Sum_probs=42.3
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|..+.++... .+++++.|.-..... .-.|+|....+....... . ...-.....+.+|+|++.|
T Consensus 5 ~~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~------~----~~~~~~~~~~~~L~~~~~Y 72 (95)
T d1bqua1 5 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA------K----RDTPTSCTVDYSTVYFVNI 72 (95)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC------C----SSCTTEEECSSCCCTTSCE
T ss_pred CCCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec------c----cccceeeeeeeecCCCcEE
Confidence 567778877554 478999999865432 235566554432111110 0 0111112356799999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
++||..
T Consensus 73 ~f~V~A 78 (95)
T d1bqua1 73 EVWVEA 78 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=92.06 E-value=0.093 Score=45.59 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.++..+++++.++++=||.=.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCCEEEEcCccc
Confidence 45778899999999999999755
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.00 E-value=0.087 Score=37.21 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=35.9
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCCC--------ceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS--------NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~--------~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
..|+.|.+...++ .+.+.|+|..+..... -.|+|....+.......-. . . +...|.
T Consensus 3 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~----------~-~----t~~~L~ 66 (94)
T d3d85d3 3 DPPKNLQLKPLKN-SRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT----------D-K----TSATVI 66 (94)
T ss_dssp CCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE----------S-S----SEEEEC
T ss_pred CCCcccEEEEecC-CCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc----------c-c----eEEEec
Confidence 4688888876543 3679999998853221 2566665443322211110 0 1 123588
Q ss_pred CCCEEEEEeCC
Q 017284 131 YDTKYYYKIGD 141 (374)
Q Consensus 131 p~t~Y~Y~v~~ 141 (374)
|++.|.+||..
T Consensus 67 p~~~Y~v~VRa 77 (94)
T d3d85d3 67 CRKNASISVRA 77 (94)
T ss_dssp CCSSCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999864
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.92 E-value=0.1 Score=45.20 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=36.8
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHh--hhcCCeEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS--AAYQPWIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~--~~~~P~~~v~GNHD 236 (374)
.+.++||+|.... .+.++.+. .-.-.|++||+++.+.. .-+.. -.+-.+ .-.--++...||||
T Consensus 46 pv~VvGDlHG~~~---DL~~if~~~g~p~~~~ylFLGDYVDRG~~-------slEvl-~lL~alKi~~P~~v~lLRGNHE 114 (288)
T d3c5wc1 46 PVTVCGDVHGQFH---DLMELFRIGGKSPDTNYLFMGDYVDRGYY-------SVETV-TLLVALKVRYRERITILRGNHE 114 (288)
T ss_dssp SEEEECBCTTCHH---HHHHHHHHHCCTTTSCEEECSCCCCSSSS-------HHHHH-HHHHHHHHHCTTTEEECCCTTS
T ss_pred CeEEEeeCCCCHH---HHHHHHHhcCCCccceEEecCcccCCCCc-------ceeHH-HHHHHHHhhCCCeEEEeccCCc
Confidence 3888999998642 23333332 22458899999954321 11111 112122 22235899999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 115 ~~ 116 (288)
T d3c5wc1 115 SR 116 (288)
T ss_dssp SH
T ss_pred cc
Confidence 74
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.66 E-value=0.038 Score=40.91 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=43.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC------CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~------~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~ 132 (374)
..|..|.+..+.. .+++.|+|.-... .....+.|....+..... ... . ...-...++|+||+|+
T Consensus 12 ~pP~~v~v~~~~s-~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~------~~~--~-~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 12 APPQDVTVQAGVT-PATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVA------EVI--F-PTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCEEEEECCCSS-TTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEE------EEC--C-TTCSEEEEESHHHHHH
T ss_pred CCCCccEEEEecC-CCEEEEEEcCCCccccCcccccceEEEEEEeecccce------eee--e-eccceeeeeccCCCCC
Confidence 5688887765432 3689999986421 123456787644321110 011 0 1122445789999999
Q ss_pred CEEEEEeCC
Q 017284 133 TKYYYKIGD 141 (374)
Q Consensus 133 t~Y~Y~v~~ 141 (374)
|.|.+||..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999853
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.57 E-value=0.11 Score=45.81 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEcCcc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.+.+...+++.++++++=||.=
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He~ 254 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHEV 254 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCSC
T ss_pred HHHHHHHHHHcCCcEEEEcCcc
Confidence 3678889999999999999973
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.36 E-value=0.16 Score=46.83 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEEcCcccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
.+++...+++++.++++=||.=.-
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~ 272 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQD 272 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCT
T ss_pred hHHHHHHHHHcCCcEEEEcCcchh
Confidence 357788999999999999998653
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.41 E-value=0.21 Score=38.84 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=24.6
Q ss_pred EEEeCCCCCCCEEEEEeCC----C-----CCCceEEEECCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD----G-----DSSREFWFQTPP 154 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~----~-----~~s~~~~F~T~p 154 (374)
..+|+||+|+|.|.++|.. + ..+....++|+|
T Consensus 156 ~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 156 SLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp EEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 5779999999999999842 1 134567888876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.30 E-value=0.29 Score=34.62 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=44.7
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
+|+.|.+.... ...++.|.-+...+ .-.|||.......+..+..-.. .........+.+|.++..|+
T Consensus 6 ~P~nv~~~s~n---~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~-------~t~~~~~~~~~~l~~~~~Y~ 75 (99)
T d1y6kr1 6 SPPSVWFEAEF---FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-------TLSYDLTAVTLDLYHSNGYR 75 (99)
T ss_dssp CCSCEEEEEET---TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-------SSEEECGGGGTTGGGSSCEE
T ss_pred CCCcceEEEEC---CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc-------ccccceeeeeeecCCCCEEE
Confidence 47778887664 46899997553322 2468888766555555443211 00011112478999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
+||..
T Consensus 76 fRVrA 80 (99)
T d1y6kr1 76 ARVRA 80 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|