Citrus Sinensis ID: 017323

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccccccccccccccccccccccccEEcccccccccHHHHHHHHccccccEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccEccccEcccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccHHHHHccHHHHHHccccccccccccccEEEEEccccccccccEEEEEcccccccEEEEccccccEEEc
Coil and Loop (DISEMBL)
malsnasstlsskslyanthtlaskphqpnfslhpanttkprslvqpitavhaaqpaknsaavkesssspakasgkwalegwktkkalqlpeypdkaQLETVLKTLedfpplvfaGEARSLEERLAEAAMGNafllqggdcaeSFKEFNANNIRDTFRVLLQMGVVLmfggqmpiikvgrmagqfakprsdpfevkngvklpsykgdningdafdeksrvpdpeRLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDfaehseqgdrYQELAHRVDEALGFMAAagltldhpamtstefwtsheclllpyeqaltrrdstsgqyydcsahmLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Flexible Loop (DISEMBL)
malsnasstlsSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPaknsaavkesssspakasgkwalEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAkprsdpfevkngvklpsykgdningdafdeksrvpdPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRgianplgikVFAIWDLFVIY
Low Complexity Region (SEG)
MalsnasstlsskslyaNTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGearsleerlaeaaMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Disordered region (IsUnstruct)
****************************************************************************WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQF***************************************RLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI*
Disordered Region (DISOPRED)
*********************************************************************************WKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAK**********GVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAI*******
Disordered Region (DISEMBL)
***********SKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVH************************WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Disordered Region (DISPRO)
*******************************************************************************EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVIY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
P29976	525	Phospho-2-dehydro-3-deoxy	yes	no	0.986	0.700	0.745	1e-164
P37215	511	Phospho-2-dehydro-3-deoxy	N/A	no	0.884	0.645	0.793	1e-161
P37216	541	Phospho-2-dehydro-3-deoxy	N/A	no	0.954	0.658	0.722	1e-160
P27608	542	Phospho-2-dehydro-3-deoxy	N/A	no	0.876	0.603	0.769	1e-160
P21357	538	Phospho-2-dehydro-3-deoxy	N/A	no	0.954	0.661	0.719	1e-160
P37822	511	Phospho-2-dehydro-3-deoxy	N/A	no	0.884	0.645	0.787	1e-159
Q00218	507	Phospho-2-dehydro-3-deoxy	no	no	0.903	0.664	0.730	1e-156
Q75LR2	554	Phospho-2-dehydro-3-deoxy	no	no	0.847	0.570	0.747	1e-154
Q75W16	539	Phospho-2-dehydro-3-deoxy	yes	no	0.847	0.586	0.775	1e-153
A0MH68	493	Probable phospho-2-dehydr	N/A	no	0.871	0.659	0.575	1e-108

>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2

 Score =  578 bits (1489), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 276/370 (74%), Positives = 315/370 (85%), Gaps = 2/370 (0%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           MALSNASS LS++S+Y    +      Q +F+ HPA  TKP+S V  +TAVHAA+PA+N+
Sbjct: 1   MALSNASS-LSTRSIYGGDLSHRPSNRQSSFTFHPAVNTKPKS-VNLVTAVHAAEPARNA 58

Query: 61  AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARS 120
            +VKES +S +  + KW  E WK KKALQLP+YP+  +LE+VLKT+E FPP+VFAGEAR+
Sbjct: 59  VSVKESVASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARN 118

Query: 121 LEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGR 180
           LEERLA+AA+G AFLLQGGDCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGR
Sbjct: 119 LEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGR 178

Query: 181 MAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLL 240
           MAGQFAKPRSD FE K+GVKLPSYKGDNINGD FDEKSR+PDP R+IRAY QSAATLNLL
Sbjct: 179 MAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLL 238

Query: 241 RSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTST 300
           R+FATGGYAA+QRVTQWNLDF E SEQ DRYQELA+RVDEALGFM+A GL  DHP MT+T
Sbjct: 239 RAFATGGYAAIQRVTQWNLDFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTT 298

Query: 301 EFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLG 360
           +F+TSHECLLLPYEQ+LTR DSTSG YYDCSAHM+W GERTRQLDGAHVEFLRGIANPLG
Sbjct: 299 DFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLG 358

Query: 361 IKVFAIWDLF 370
           IKV    D F
Sbjct: 359 IKVSNKMDPF 368

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 5EC: 4

>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1

 Score =  566 bits (1460), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/344 (79%), Positives = 299/344 (86%), Gaps = 14/344 (4%)

Query: 20  HTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWAL 79
           H L +   QP FSL P      R    PI+AVHAA+P+K   AVK+         GKW+L
Sbjct: 19  HLLHNPTPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSL 64

Query: 80  EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
           + WKTKKALQLPEYPD+ +LE+VLKTLE  PPLVFAGEARSLEE+L EAA+G AFLLQGG
Sbjct: 65  DSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGG 124

Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
           DCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE  NGV
Sbjct: 125 DCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGV 184

Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
           KLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNL
Sbjct: 185 KLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNL 244

Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
           DF E+SEQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR
Sbjct: 245 DFVENSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTR 304

Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
            DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct: 305 EDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKV 348

May be involved in the synthesis of secondary metabolites derived from intermediates of the pre-chorismate pathway up to shikimate.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1

 Score =  566 bits (1458), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/382 (72%), Positives = 308/382 (80%), Gaps = 26/382 (6%)

Query: 1   MALSNASST---LSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPA 57
           MALS  ++T   LS+KSL  N   L+S      FS     +TK    VQPI AVH++   
Sbjct: 1   MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFS---NKSTKTVRFVQPIAAVHSSDSN 57

Query: 58  KNSAAVKESSSSPAKASG----------------KWALEGWKTKKALQLPEYPDKAQLET 101
           KN       S  P K+S                 +WA++ WK+KKALQLPEYPD+ +L +
Sbjct: 58  KNPIV----SDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRS 113

Query: 102 VLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLL 161
           VLKT+++FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LL
Sbjct: 114 VLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILL 173

Query: 162 QMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVP 221
           QMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR P
Sbjct: 174 QMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTP 233

Query: 222 DPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEA 281
           DP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEA
Sbjct: 234 DPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEA 293

Query: 282 LGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERT 341
           LGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG +YDCSAH LWVGERT
Sbjct: 294 LGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERT 353

Query: 342 RQLDGAHVEFLRGIANPLGIKV 363
           RQLDGAHVEFLRGIANPLGIKV
Sbjct: 354 RQLDGAHVEFLRGIANPLGIKV 375

Involved in maintaining the supply of chorismate for the biosynthesis of the aromatic amino acids and other chorismate-derived metabolites.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1

 Score =  565 bits (1456), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 261/339 (76%), Positives = 294/339 (86%), Gaps = 12/339 (3%)

Query: 37  NTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPA------------KASGKWALEGWKT 84
           N+TKP   VQPI+A+H++  +KN     + SS P+                +W +E WK+
Sbjct: 38  NSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKS 97

Query: 85  KKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAES 144
           KKALQLPEYP++ +L++VLKT+E+FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAES
Sbjct: 98  KKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAES 157

Query: 145 FKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSY 204
           FKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE KNGVKLPSY
Sbjct: 158 FKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSY 217

Query: 205 KGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEH 264
           +GDN+NGDAFD KSR PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EH
Sbjct: 218 RGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEH 277

Query: 265 SEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTS 324
           SEQGDRY+ELA+RVDEALGFMAAAGLT+DHP M +TEFWTSHECLLLPYEQ+LTR DSTS
Sbjct: 278 SEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTS 337

Query: 325 GQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           G YYDCSAH +WVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct: 338 GLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKV 376

Nicotiana tabacum (taxid: 4097)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2

 Score =  564 bits (1453), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 275/382 (71%), Positives = 311/382 (81%), Gaps = 26/382 (6%)

Query: 1   MALSNASST---LSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPA 57
           MALS+ S+T   L ++SL  N   L S      FS    N+TK    VQPI+AVH++   
Sbjct: 1   MALSSTSTTNSLLPNRSLVQNQPLLPSPLKNAFFS---NNSTKTVRFVQPISAVHSS--- 54

Query: 58  KNSAAVKESSSSPAKASG----------------KWALEGWKTKKALQLPEYPDKAQLET 101
            +S  +   S  P+K+S                 +WA++ WK+KKALQLPEYP++ +L +
Sbjct: 55  -DSNKIPIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRS 113

Query: 102 VLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLL 161
           VLKT+++FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LL
Sbjct: 114 VLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILL 173

Query: 162 QMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVP 221
           QMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR P
Sbjct: 174 QMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTP 233

Query: 222 DPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEA 281
           DP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEA
Sbjct: 234 DPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEA 293

Query: 282 LGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERT 341
           LGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG YYDCSAH LWVGERT
Sbjct: 294 LGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERT 353

Query: 342 RQLDGAHVEFLRGIANPLGIKV 363
           RQLDGAHVEFLRGIANPLGIKV
Sbjct: 354 RQLDGAHVEFLRGIANPLGIKV 375

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1

 Score =  562 bits (1448), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/344 (78%), Positives = 297/344 (86%), Gaps = 14/344 (4%)

Query: 20  HTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWAL 79
           H L +   QP FSL P      R    PI+AVHAA+P+K   AVK+         GKW+L
Sbjct: 19  HLLHNPLPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSL 64

Query: 80  EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
           + WKTKKALQLPEYPD+ +LE+VLKTLE  PPLVFAGEARSLEE+L EAA+G AFLLQGG
Sbjct: 65  DSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGG 124

Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
           DCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDP E  NGV
Sbjct: 125 DCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGV 184

Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
           KLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNL
Sbjct: 185 KLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNL 244

Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
           DF E+ EQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR
Sbjct: 245 DFVENCEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTR 304

Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
            DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct: 305 EDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKV 348

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2

 Score =  551 bits (1421), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 266/364 (73%), Positives = 299/364 (82%), Gaps = 27/364 (7%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQP-NFSLHPANTTKPRSLVQPITAVHAAQPAKN 59
           M   NASS L++KS     H     P +P +FS              P+ AVH+  P K 
Sbjct: 1   MVTLNASSPLTTKSFLPYRHA----PRRPISFS--------------PVFAVHSTDPKK- 41

Query: 60  SAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEAR 119
                  S+  A AS KW+LE WK+KKALQLP+YPD+  +++VL+TL  FPP+VFAGEAR
Sbjct: 42  -------STQSASASVKWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEAR 94

Query: 120 SLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVG 179
            LE++L +AAMG AF+LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQ+P+IKVG
Sbjct: 95  KLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVG 154

Query: 180 RMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNL 239
           RMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR+PDP R++RAY QS ATLNL
Sbjct: 155 RMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNL 214

Query: 240 LRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTS 299
           LR+FATGGYAAMQRV+QWNLDF +HSEQGDRY+ELA+RVDEALGFM AAGLT  HP MT+
Sbjct: 215 LRAFATGGYAAMQRVSQWNLDFTQHSEQGDRYRELANRVDEALGFMGAAGLTSAHPIMTT 274

Query: 300 TEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL 359
           TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL
Sbjct: 275 TEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL 334

Query: 360 GIKV 363
           GIKV
Sbjct: 335 GIKV 338

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2

 Score =  543 bits (1400), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 257/344 (74%), Positives = 291/344 (84%), Gaps = 28/344 (8%)

Query: 48  ITAVHAAQPAKNS-----AAVKESSSSPAK-----------------------ASGKWAL 79
           + AVHAA+P+KN      +A K SS S A                        A  +WA+
Sbjct: 38  VRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAV 97

Query: 80  EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
           + W+TKKALQLPEYP+ A+LE VLKT+E FPP+VFAGEAR LEERLA+AAMG AFLLQGG
Sbjct: 98  DSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGG 157

Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
           DCAESFKEFN NNIRDTFRVLLQM  VL FGGQMP+IKVGRMAGQFAKPRS+ FE ++GV
Sbjct: 158 DCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGV 217

Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
           KLPSY+GDNINGDAF+EKSR+PDP+R++RAY QSAATLNLLR+FATGGYAAMQRVTQWNL
Sbjct: 218 KLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNL 277

Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
           DF +HSEQGDRY+ELAHRVDEALGFM+AAGLT+DHP MTST+FWTSHECLLLPYEQ+LTR
Sbjct: 278 DFTQHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTR 337

Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           +DST+G +YDCSAHMLWVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct: 338 QDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKV 381

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1

 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 255/329 (77%), Positives = 291/329 (88%), Gaps = 13/329 (3%)

Query: 48  ITAVHAAQPAKNSAAVKESS--SSPAKAS---------GKWALEGWKTKKALQLPEYPDK 96
           ++AVHAA PAK++  V+ ++  SSP+  +         GKW ++ WK KKALQLPEYP +
Sbjct: 38  VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQ 97

Query: 97  AQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDT 156
            +L++VLKT+E FPP+VFAGEAR LEERLA+AAMG AF+LQGGDCAESFKEFNANNIRDT
Sbjct: 98  EELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDT 157

Query: 157 FRVLLQMGVVLMFGGQMPIIKV-GRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFD 215
           FR+LLQMG VLMFGGQMP++KV GRMAGQFAKPRSD FE ++GVKLPSY+GDNINGD FD
Sbjct: 158 FRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFD 217

Query: 216 EKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDR-YQEL 274
           EKSRVPDP+R+IRAY QS ATLNLLR+FATGGYAAMQRVTQWNLDF +HSEQGDR Y+EL
Sbjct: 218 EKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYREL 277

Query: 275 AHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHM 334
           AHRVDEALGFM AAGLT+DHP MT+T+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAHM
Sbjct: 278 AHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHM 337

Query: 335 LWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           LWVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct: 338 LWVGERTRQLDGAHVEFLRGVANPLGIKV 366

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2

 Score =  390 bits (1003), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/377 (57%), Positives = 256/377 (67%), Gaps = 52/377 (13%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTT---KPRSLVQPITA-VHAAQP 56
           MA+SN +S L+SK L +       KPHQP  +    +TT   KPRS  +PI+A VH  QP
Sbjct: 1   MAMSN-TSALASKLLPS------CKPHQPTLTFFSPSTTCQKKPRS-SRPISAAVHVTQP 52

Query: 57  AKNSAAVKESSSSPAKAS---GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLV 113
            K    +  ++++  + S   G W  E WK+KKALQLPEYPD+ +L+ VLKT+E FPPLV
Sbjct: 53  PKTP--ISSATATKRRLSLLNGVW--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLV 108

Query: 114 FAGEARSLEERLAEAAMGNAFLLQGGDCAESFKE-------FNANNIRDTFRVLLQMGVV 166
           FAGEARSLEE+LA+AAMGNAFLLQGGDCAESFKE       +  N   D  R        
Sbjct: 109 FAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPLYSRYFQNTASDECR-------- 160

Query: 167 LMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERL 226
           L FGGQ P+IKVGRMAGQFAKPR DPFE K+G+ L    G  +  +A+ +  ++     L
Sbjct: 161 LTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGANGWPVAWEAYCKLQQLSPSRAL 220

Query: 227 IRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMA 286
           +   C  A +  +                  +LDF EHSEQGDRYQELAHRVDEALGFM 
Sbjct: 221 LLVVCCYAESHPM------------------DLDFVEHSEQGDRYQELAHRVDEALGFMD 262

Query: 287 AAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDG 346
           A GLT+DHP M +TEFWTSHECLLLPYEQALTR DSTSG +YDCSAHMLWVGERTRQLDG
Sbjct: 263 ACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDG 322

Query: 347 AHVEFLRGIANPLGIKV 363
           AHVEFLRG+ANPLGIKV
Sbjct: 323 AHVEFLRGVANPLGIKV 339

Catharanthus roseus (taxid: 4058)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
255581748	533	Phospho-2-dehydro-3-deoxyheptonate aldol	0.954	0.667	0.822	1e-173
222136861	532	3-deoxy-D-arabino-heptulosonate-7-phosph	0.965	0.676	0.801	1e-169
224083602	525	2-dehydro-3-deoxyphosphoheptonate aldola	0.959	0.681	0.803	1e-169
359496691	532	PREDICTED: phospho-2-dehydro-3-deoxyhept	0.965	0.676	0.798	1e-169
224084626	531	2-dehydro-3-deoxyphosphoheptonate aldola	0.943	0.662	0.758	1e-166
2546988	535	2-dehydro-3-deoxyphosphoheptonate aldola	0.962	0.671	0.767	1e-165
224063263	531	2-dehydro-3-deoxyphosphoheptonate aldola	0.943	0.662	0.747	1e-164
76782190	539	putative 3-deoxy-D-arabino-heptulosonate	0.943	0.653	0.742	1e-164
2398679	535	3-deoxy-D-arabino-heptulosonate 7-phosph	0.951	0.663	0.761	1e-163
166688	525	3-deoxy-D-arabino-heptulosonate y-phosph	0.986	0.700	0.745	1e-162

>gi|255581748|ref|XP_002531676.1| Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis] gi|223528707|gb|EEF30720.1| Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/366 (82%), Positives = 324/366 (88%), Gaps = 10/366 (2%)

Query: 6   ASSTLSSKSLYANTHTLASKP----HQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS- 60
           A STLSSKSLYAN       P    HQ +FSL P N+ KPRSL   ITAVHAA+P KNS 
Sbjct: 2   ALSTLSSKSLYANNPRTVFNPNQQHHQSSFSLLPGNS-KPRSLPS-ITAVHAAEPTKNST 59

Query: 61  AAVKESSSSP---AKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGE 117
            +VK + SSP   A  +GKW ++ WKTKKALQLPEYPD  +LE VLKT+E FPP+VFAGE
Sbjct: 60  VSVKTTPSSPPVAAPGTGKWTVDSWKTKKALQLPEYPDADKLENVLKTIEAFPPIVFAGE 119

Query: 118 ARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIK 177
           ARSLEE+LA+AAMGNAFLLQGGDCAESFKEF+ANNIRDTFR+LLQMGVVLMFGGQMP+IK
Sbjct: 120 ARSLEEKLADAAMGNAFLLQGGDCAESFKEFSANNIRDTFRILLQMGVVLMFGGQMPVIK 179

Query: 178 VGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATL 237
           VGRMAGQFAKPRSDPFE KNGVKLPSYKGDNINGDAFDEKSR+PDPERLIRAYCQSAATL
Sbjct: 180 VGRMAGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAFDEKSRIPDPERLIRAYCQSAATL 239

Query: 238 NLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAM 297
           NLLR+FATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAA GLT++HP M
Sbjct: 240 NLLRAFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAATGLTVEHPVM 299

Query: 298 TSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIAN 357
           T+TEFWTSHECL LPYEQALTR DSTSG YYDCSAHMLW GERTRQLDGAH+EFLRGI+N
Sbjct: 300 TTTEFWTSHECLHLPYEQALTRLDSTSGLYYDCSAHMLWCGERTRQLDGAHMEFLRGISN 359

Query: 358 PLGIKV 363
           PLGIKV
Sbjct: 360 PLGIKV 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222136861|gb|ACM45080.1| 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase 01 [Vitis vinifera]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 294/367 (80%), Positives = 325/367 (88%), Gaps = 7/367 (1%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           MALSNAS TLSSKS+Y  TH+L S       S    + T  RSL  PI+AVHAA+PAKN 
Sbjct: 1   MALSNAS-TLSSKSVY-QTHSLFSSLSHQPSSSLVPSKTHLRSL-HPISAVHAAEPAKNP 57

Query: 61  AAV----KESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAG 116
             V    K SS S    SGKW ++ WKTKKALQLPEYP+++ LE+VL+TLE FPP+VFAG
Sbjct: 58  VVVDKPPKTSSPSVPAGSGKWTVDSWKTKKALQLPEYPNESDLESVLQTLEAFPPIVFAG 117

Query: 117 EARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPII 176
           EARSLEERL +AAMGNAFLLQGGDCAESFKEF+ANNIRDTFR++LQMG VLMFGGQ+P+I
Sbjct: 118 EARSLEERLGDAAMGNAFLLQGGDCAESFKEFSANNIRDTFRIILQMGAVLMFGGQVPVI 177

Query: 177 KVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAAT 236
           KVGRMAGQFAKPRSDPFE KNGVKLPSYKGDNINGDAF+EKSR+PDP+R+IRAYCQ+AAT
Sbjct: 178 KVGRMAGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAFNEKSRIPDPQRMIRAYCQAAAT 237

Query: 237 LNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPA 296
           LNLLR+FATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFM+AAGLT+DHP 
Sbjct: 238 LNLLRAFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMSAAGLTVDHPI 297

Query: 297 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIA 356
           MT+TEFWTSHECLLLPYEQ+LTR+DSTSG YYDCSAHMLWVGERTRQLDGAHVEFLRG+A
Sbjct: 298 MTTTEFWTSHECLLLPYEQSLTRKDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVA 357

Query: 357 NPLGIKV 363
           NPLGIKV
Sbjct: 358 NPLGIKV 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083602|ref|XP_002307072.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] gi|222856521|gb|EEE94068.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa]

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/362 (80%), Positives = 321/362 (88%), Gaps = 4/362 (1%)

Query: 6   ASSTLSSKSLYANTHTLASKPH---QPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAA 62
           A STLSSKSLY+N + L  +      P FSL P + T        I+AVHAA+P KNS +
Sbjct: 2   ALSTLSSKSLYSNANNLFQQNQQQQSPTFSLVPGSKTLKSKSNLSISAVHAAEPTKNSVS 61

Query: 63  VKESSSS-PAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSL 121
           VKES++   A  +GKW+LE WKTKKALQLPEYPD  +LETVLKT+E FPP+VFAGEARSL
Sbjct: 62  VKESAAPVAAPGTGKWSLESWKTKKALQLPEYPDANELETVLKTIETFPPIVFAGEARSL 121

Query: 122 EERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRM 181
           EE LAEAAMGNAFLLQGGDCAESFKEF+ANNIRDTFR+LLQMGVVLMFGGQ+P+IKVGRM
Sbjct: 122 EENLAEAAMGNAFLLQGGDCAESFKEFSANNIRDTFRILLQMGVVLMFGGQVPVIKVGRM 181

Query: 182 AGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLR 241
           AGQFAKPRSDPFE K+GVKLPSYKGDNINGDAF+EKSR+PDP+RLIRAYCQSAATLNLLR
Sbjct: 182 AGQFAKPRSDPFEEKDGVKLPSYKGDNINGDAFNEKSRIPDPQRLIRAYCQSAATLNLLR 241

Query: 242 SFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTE 301
           +FATGGYAAMQRVTQWNLDFA+HSEQGDRYQELA+RVDEALGFMAAAGLT+DHP MT+TE
Sbjct: 242 AFATGGYAAMQRVTQWNLDFAQHSEQGDRYQELANRVDEALGFMAAAGLTVDHPIMTTTE 301

Query: 302 FWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGI 361
           FWTSHECL LPYEQ+LTR DSTSG YYDCSAHMLW GERTRQLDGAHVEFLRGI+NP+GI
Sbjct: 302 FWTSHECLHLPYEQSLTRLDSTSGLYYDCSAHMLWCGERTRQLDGAHVEFLRGISNPIGI 361

Query: 362 KV 363
           KV
Sbjct: 362 KV 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496691|ref|XP_003635302.1| PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Vitis vinifera]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/367 (79%), Positives = 325/367 (88%), Gaps = 7/367 (1%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           MALSNAS TLSSKS++  TH+L S       S      T  RSL  PI+AVHAA+PAKN 
Sbjct: 1   MALSNAS-TLSSKSVH-QTHSLFSSLSHQPSSSLVPGKTHLRSL-HPISAVHAAEPAKNP 57

Query: 61  AAV----KESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAG 116
             V    K SS S    SGKW ++ WKTKKALQLPEYP++++LE+VL+TLE FPP+VFAG
Sbjct: 58  VVVDKPPKTSSPSVPAGSGKWTVDSWKTKKALQLPEYPNESELESVLQTLEAFPPIVFAG 117

Query: 117 EARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPII 176
           EARSLEERL +AAMGNAFLLQGGDCAESFKEF+ANNIRDTFR++LQMG VLMFGGQ+P+I
Sbjct: 118 EARSLEERLGDAAMGNAFLLQGGDCAESFKEFSANNIRDTFRIILQMGAVLMFGGQVPVI 177

Query: 177 KVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAAT 236
           KVGRMAGQFAKPRSDPFE KNGVKLPSYKGDNINGDAF+EKSR+PDP+R+IRAYCQ+AAT
Sbjct: 178 KVGRMAGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAFNEKSRIPDPQRMIRAYCQAAAT 237

Query: 237 LNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPA 296
           LNLLR+FATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFM+AAGLT+DHP 
Sbjct: 238 LNLLRAFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMSAAGLTVDHPI 297

Query: 297 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIA 356
           MT+TEFWTSHECLLLPYEQ+LTR+DSTSG YYDCSAHMLWVGERTRQLDGAHVEFLRG+A
Sbjct: 298 MTTTEFWTSHECLLLPYEQSLTRKDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVA 357

Query: 357 NPLGIKV 363
           NPLGIKV
Sbjct: 358 NPLGIKV 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084626|ref|XP_002307364.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] gi|118486265|gb|ABK94974.1| unknown [Populus trichocarpa] gi|222856813|gb|EEE94360.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/373 (75%), Positives = 320/373 (85%), Gaps = 21/373 (5%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           M+L+ +SS + SKSL       ++KPHQP F      TTKP      I+AVH+A P+K+ 
Sbjct: 1   MSLT-SSSIIPSKSLIP-----SNKPHQPCFF-----TTKPSRSTLRISAVHSADPSKSP 49

Query: 61  AAVKESSSSPAKAS----------GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFP 110
             +K  +++  KA+          GKW +E WK+KKALQLPEYPDK   ++VLKTL+ FP
Sbjct: 50  PPIKTPAATSTKATTVAPTVNVGAGKWTVESWKSKKALQLPEYPDKEDFDSVLKTLDAFP 109

Query: 111 PLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFG 170
           P+VFAGEARSLEE+LAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFR+LLQMGVVLMFG
Sbjct: 110 PIVFAGEARSLEEKLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFG 169

Query: 171 GQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAY 230
           GQMP+IKVGR+AGQFAKPRSDPFE K+GVKLPSY+GDN+NGDAFDEKSR+PDP+R+IRAY
Sbjct: 170 GQMPVIKVGRLAGQFAKPRSDPFEEKDGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAY 229

Query: 231 CQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGL 290
           CQSAATLNLLR+FATGGYAAMQRVTQWNLDF EHSEQGDRY+ELAHRVDEALGFMAAAGL
Sbjct: 230 CQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAAAGL 289

Query: 291 TLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVE 350
           T+DHP MT+TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LWVGERTRQLDGAHVE
Sbjct: 290 TVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVE 349

Query: 351 FLRGIANPLGIKV 363
           FLRG+ANPLGIKV
Sbjct: 350 FLRGVANPLGIKV 362

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2546988|emb|CAA75386.1| 2-dehydro-3-deoxyphosphoheptonate aldolase [Morinda citrifolia]

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 287/374 (76%), Positives = 326/374 (87%), Gaps = 15/374 (4%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFS-LHPANTT---KPRSLVQPITAVHAAQP 56
           MALSNASS L S+SL     +  S+ +QP  + L PA+TT   +P+S   PI+AVHAA+P
Sbjct: 1   MALSNASSALVSRSLLP---SYKSQSNQPALTFLLPASTTNHLQPKSH-HPISAVHAAEP 56

Query: 57  AKN-------SAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDF 109
           AK        +AA  +++ S     GKW+LE WK KKALQLPEYP++ +L+ VL+T+E +
Sbjct: 57  AKTPITSTTAAAASTKAAPSVEGKQGKWSLESWKKKKALQLPEYPNEEELQAVLRTIEAY 116

Query: 110 PPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMF 169
           PPLVFAGEAR+LEER+A+AAMGNAFLLQGGDCAESFKEFNANNIRDTFR+LLQM VVLMF
Sbjct: 117 PPLVFAGEARNLEERIAQAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMF 176

Query: 170 GGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRA 229
           GGQMP++KVGRMAGQFAKPRSDPFE K+GVKLPSYKGDNINGD FDEKSR+PDP+RLIRA
Sbjct: 177 GGQMPVVKVGRMAGQFAKPRSDPFEEKDGVKLPSYKGDNINGDTFDEKSRLPDPQRLIRA 236

Query: 230 YCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAG 289
           YCQSAATLNLLR+FATGGYAAMQRVT+WNLDF EHSEQGDRYQELAHRVDEALGFMAAAG
Sbjct: 237 YCQSAATLNLLRAFATGGYAAMQRVTEWNLDFVEHSEQGDRYQELAHRVDEALGFMAAAG 296

Query: 290 LTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHV 349
           LT+DHP M+STEFWTSHECLLLPYEQAL+R DSTSG +YDCSAHMLWVGERTRQLDGAHV
Sbjct: 297 LTIDHPIMSSTEFWTSHECLLLPYEQALSREDSTSGLFYDCSAHMLWVGERTRQLDGAHV 356

Query: 350 EFLRGIANPLGIKV 363
           EFLRG++NPLGIKV
Sbjct: 357 EFLRGVSNPLGIKV 370

Source: Morinda citrifolia

Species: Morinda citrifolia

Genus: Morinda

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063263|ref|XP_002301067.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] gi|222842793|gb|EEE80340.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/373 (74%), Positives = 319/373 (85%), Gaps = 21/373 (5%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           M+L+ +SS + +KSL       ++KPH P F      TTKP   +  I+AVH+A P+K+ 
Sbjct: 1   MSLT-SSSVIPTKSLIP-----SNKPHHPCFF-----TTKPSRSILHISAVHSADPSKSP 49

Query: 61  AAVKESSSSPAKA----------SGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFP 110
           + +K  +++  KA          +GKW +E WK+KKALQLPEYP+K  L++VL+TL+ FP
Sbjct: 50  SPIKTPAATSTKAATVAPTTNVGTGKWTVESWKSKKALQLPEYPNKEDLDSVLETLDAFP 109

Query: 111 PLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFG 170
           P+VFAGEAR+LEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFG
Sbjct: 110 PIVFAGEARNLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFG 169

Query: 171 GQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAY 230
           GQMP+IKVGRMAGQFAKPRSDP E KNGVKLPSY+GDN+NGDAFDEKSR+PDP+R+IRAY
Sbjct: 170 GQMPVIKVGRMAGQFAKPRSDPLEEKNGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAY 229

Query: 231 CQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGL 290
           CQSAATLNLLR+FATGGYAAMQRVTQWNLDF EHSEQGDRY+ELAHRVDEALGFMAAAGL
Sbjct: 230 CQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAAAGL 289

Query: 291 TLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVE 350
           T+DHP MT+TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LW GERTRQLDGAHVE
Sbjct: 290 TVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWAGERTRQLDGAHVE 349

Query: 351 FLRGIANPLGIKV 363
           FLRG+ANPLGIKV
Sbjct: 350 FLRGVANPLGIKV 362

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76782190|gb|ABA54865.1| putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 3 [Fagus sylvatica]

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/384 (74%), Positives = 314/384 (81%), Gaps = 32/384 (8%)

Query: 1   MAL--SNASSTLSSKSLYANTHTLAS--KPHQPNFSLHPANTTKPRSLVQPITAVHAAQP 56
           MAL  S+ SS +     +  T +L    K HQP+FS+      KPRSL   I+AVHAA+P
Sbjct: 1   MALTSSSGSSVVIPTKSFIQTQSLVPSLKSHQPSFSI------KPRSLPS-ISAVHAAEP 53

Query: 57  AKNSAAVKESSSSPAK-----------------ASGKWALEGWKTKKALQLPEYPDKAQL 99
           AKN       S  P K                   GKW LE WKTKKALQLPEYPD+   
Sbjct: 54  AKNPIV----SDKPVKQQITPTTTKTTTSTHNAVPGKWTLESWKTKKALQLPEYPDQEAF 109

Query: 100 ETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRV 159
            +VL+TLE FPP+VFAGEAR+LEE+L EAAMGNAFLLQGGDCAESFKEFNANNIRDTFR+
Sbjct: 110 NSVLETLEAFPPIVFAGEARNLEEKLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRI 169

Query: 160 LLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSR 219
           LLQMGVVLMFGGQMP++KVGRMAGQFAKPRSDPFE KNGVKLPSY+GDN+NGDAFDEKSR
Sbjct: 170 LLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSR 229

Query: 220 VPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVD 279
            PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQRVTQWNLDF EHSEQGDRY+ELAHRVD
Sbjct: 230 TPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVD 289

Query: 280 EALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGE 339
           EALGFM+AAGLT+DHP MT+TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH +WVGE
Sbjct: 290 EALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRMDSTSGLYYDCSAHFIWVGE 349

Query: 340 RTRQLDGAHVEFLRGIANPLGIKV 363
           RTRQLDGAH+EFLRG+ANPLGIKV
Sbjct: 350 RTRQLDGAHIEFLRGVANPLGIKV 373

Source: Fagus sylvatica

Species: Fagus sylvatica

Genus: Fagus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2398679|emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Morinda citrifolia]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 287/377 (76%), Positives = 322/377 (85%), Gaps = 22/377 (5%)

Query: 1   MALSNASSTL-SSKSLYANTHTLASKPHQPNFSLHPANTTKP--RSLVQPITAVHAA--- 54
           MAL+N+ +TL  +K+L  +     S+P  P  S   +N +KP  RS V+PI+AVHAA   
Sbjct: 1   MALTNSHNTLLPNKALVRH-----SQPLLPKTSNFVSNPSKPSIRS-VEPISAVHAADKP 54

Query: 55  -QPAKNSAAVKESSSSPAKAS-------GKWALEGWKTKKALQLPEYPDKAQLETVLKTL 106
            +P   SA V  SS+ P  ++        KW LE WKTKKALQLPEYPD+ +LE+VLKTL
Sbjct: 55  QKPTPPSATV--SSAVPTVSAPVVKIPEKKWTLESWKTKKALQLPEYPDQVELESVLKTL 112

Query: 107 EDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVV 166
           + FPP+VFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFR+LLQMG V
Sbjct: 113 DSFPPIVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAV 172

Query: 167 LMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERL 226
           LMFGGQMP+IKVGRMAGQFAKPRS+PFE KNGVKLPSY+GDN+NGDAFD KSR PDP+R+
Sbjct: 173 LMFGGQMPVIKVGRMAGQFAKPRSEPFEEKNGVKLPSYRGDNVNGDAFDAKSRAPDPQRM 232

Query: 227 IRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMA 286
           IRAYCQ+AATLNLLR+FATGGYAAMQRVTQWNLDF EHSEQGDRY+ELAHRVDEALGFM+
Sbjct: 233 IRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMS 292

Query: 287 AAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDG 346
           AAGLT+DHP MT+TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LWVGERTRQLDG
Sbjct: 293 AAGLTMDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDG 352

Query: 347 AHVEFLRGIANPLGIKV 363
           AHVEFLRG+ANPLGIKV
Sbjct: 353 AHVEFLRGVANPLGIKV 369

Source: Morinda citrifolia

Species: Morinda citrifolia

Genus: Morinda

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166688|gb|AAA32784.1| 3-deoxy-D-arabino-heptulosonate y-phosphate synthase [Arabidopsis thaliana]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/370 (74%), Positives = 315/370 (85%), Gaps = 2/370 (0%)

Query: 1   MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
           MALSNASS LS++S+Y    +      Q +F+ HPA  TKP+S V  +TAVHAA+PA+N+
Sbjct: 1   MALSNASS-LSTRSIYGGDLSHRPSNRQSSFTFHPAVNTKPKS-VNLVTAVHAAEPARNA 58

Query: 61  AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARS 120
            +VKES +S +  + KW  E WK KKALQLP+YP+  +LE+VLKT+E FPP+VFAGEAR+
Sbjct: 59  VSVKESVASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARN 118

Query: 121 LEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGR 180
           LEERLA+AA+G AFLLQGGDCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGR
Sbjct: 119 LEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGR 178

Query: 181 MAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLL 240
           MAGQFAKPRSD FE K+GVKLPSYKGDNINGD FDEKSR+PDP R+IRAY QSAATLNLL
Sbjct: 179 MAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLL 238

Query: 241 RSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTST 300
           R+FATGGYAA+QRVTQWNLDF E SEQ DRYQELA+RVDEALGFM+A GL  DHP MT+T
Sbjct: 239 RAFATGGYAAIQRVTQWNLDFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTT 298

Query: 301 EFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLG 360
           +F+TSHECLLLPYEQ+LTR DSTSG YYDCSAHM+W GERTRQLDGAHVEFLRGIANPLG
Sbjct: 299 DFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLG 358

Query: 361 IKVFAIWDLF 370
           IKV    D F
Sbjct: 359 IKVSNKMDPF 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2005525	525	DHS1 "3-deoxy-D-arabino-heptul	0.932	0.662	0.726	5.2e-136
TAIR|locus:2005526	507	DHS2 "3-deoxy-d-arabino-heptul	0.844	0.621	0.762	6.2e-133
TAIR|locus:2009547	527	AT1G22410 [Arabidopsis thalian	0.900	0.637	0.732	2.7e-132
TIGR_CMR|SPO_1942	465	SPO_1942 "3-deoxy-7-phosphohep	0.777	0.623	0.544	5.6e-84
TIGR_CMR|CJE_0816	446	CJE_0816 "3-deoxy-7-phosphohep	0.769	0.643	0.548	2.4e-83
ASPGD|ASPL0000049433	482	AN1673 [Emericella nidulans (t	0.656	0.508	0.428	1.3e-63
UNIPROTKB|G4N683	466	MGG_08596 "Phospho-2-dehydro-3	0.761	0.609	0.418	2.7e-59
UNIPROTKB|A0R033	464	aroG "Phospho-2-dehydro-3-deox	0.742	0.596	0.452	8.4e-58
UNIPROTKB|O53512	462	aroG "Phospho-2-dehydro-3-deox	0.774	0.625	0.430	7.5e-57

TAIR|locus:2005525 DHS1 "3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
 Identities = 255/351 (72%), Positives = 290/351 (82%)

Query:    22 LASKP--HQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWAL 79
             L+ +P   Q +F+ HPA  TKP+S V  +TAVHAA+PA+N+ +VKES +S +  + KW  
Sbjct:    19 LSHRPSNRQSSFTFHPAVNTKPKS-VNLVTAVHAAEPARNAVSVKESVASSSSGALKWTP 77

Query:    80 EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGG 139
             E WK KKALQLP+YP+  +LE+VLKT+E FPP+VFAG             +G AFLLQGG
Sbjct:    78 ESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGG 137

Query:   140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
             DCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGRMAGQFAKPRSD FE K+GV
Sbjct:   138 DCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGV 197

Query:   200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
             KLPSYKGDNINGD FDEKSR+PDP R+IRAY QSAATLNLLR+FATGGYAA+QRVTQWNL
Sbjct:   198 KLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGGYAAIQRVTQWNL 257

Query:   260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
             DF E SEQ DRYQELA+RVDEALGFM+A GL  DHP MT+T+F+TSHECLLLPYEQ+LTR
Sbjct:   258 DFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTR 317

Query:   320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLF 370
              DSTSG YYDCSAHM+W GERTRQLDGAHVEFLRGIANPLGIKV    D F
Sbjct:   318 LDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPF 368

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA;IGI;IDA;TAS

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;TAS

GO:0009423 "chorismate biosynthetic process" evidence=IGI;IDA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2005526 DHS2 "3-deoxy-d-arabino-heptulosonate 7-phosphate synthase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
 Identities = 247/324 (76%), Positives = 274/324 (84%)

Query:    40 KPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQL 99
             +P S   P+ AVH+  P K        S+  A AS KW+LE WK+KKALQLP+YPD+  +
Sbjct:    24 RPISF-SPVFAVHSTDPKK--------STQSASASVKWSLESWKSKKALQLPDYPDQKDV 74

Query:   100 ETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRV 159
             ++VL+TL  FPP+VFAG             MG AF+LQGGDCAESFKEFNANNIRDTFRV
Sbjct:    75 DSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRV 134

Query:   160 LLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSR 219
             LLQMGVVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR
Sbjct:   135 LLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSR 194

Query:   220 VPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVD 279
             +PDP R++RAY QS ATLNLLR+FATGGYAAMQRV+QWNLDF +HSEQGDRY+ELA+RVD
Sbjct:   195 IPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQHSEQGDRYRELANRVD 254

Query:   280 EALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGE 339
             EALGFM AAGLT  HP MT+TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGE
Sbjct:   255 EALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGE 314

Query:   340 RTRQLDGAHVEFLRGIANPLGIKV 363
             RTRQLDGAHVEFLRGIANPLGIKV
Sbjct:   315 RTRQLDGAHVEFLRGIANPLGIKV 338

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA;IGI

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA;TAS

GO:0009423 "chorismate biosynthetic process" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2009547 AT1G22410 [Arabidopsis thaliana (taxid:3702)]

 Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
 Identities = 249/340 (73%), Positives = 276/340 (81%)

Query:    28 QPNFSLHPANTTKPR-SLVQPITAVHAAQPAKNSAAVKESSSSPAKAS---GKWALEGWK 83
             QPNFS   +  T  R S VQ      AA  A  +     + + P   +   GKWA E W+
Sbjct:    22 QPNFSSAVSRPTSFRISAVQTDPKTPAASSASAATTTPATLTKPVGVNVGKGKWAPESWR 81

Query:    84 TKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAE 143
             TKKALQ P+YPD A LE VL+T+E FPP+VFAG             MG AFLLQGGDCAE
Sbjct:    82 TKKALQQPDYPDLAALEAVLETIEAFPPIVFAGEARLLEERLGQAAMGEAFLLQGGDCAE 141

Query:   144 SFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPS 203
             SFKEFNANNIRDTFR+LLQMG VLMFGGQ+P++KVGRMAGQFAKPRSD FE K+GVKLPS
Sbjct:   142 SFKEFNANNIRDTFRILLQMGAVLMFGGQVPVVKVGRMAGQFAKPRSDSFEEKDGVKLPS 201

Query:   204 YKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAE 263
             Y+GDNINGDAFD KSR+PDP+R+IRAYCQSAATLNLLR+FATGGYAAMQRVTQWNLDF E
Sbjct:   202 YRGDNINGDAFDSKSRIPDPQRMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 261

Query:   264 HSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDST 323
              SEQGDRY+ELA+RVDEALGFM AAGLTLDHP M +T+FWTSHECLLLPYEQ+LTR DST
Sbjct:   262 RSEQGDRYRELANRVDEALGFMHAAGLTLDHPIMQTTDFWTSHECLLLPYEQSLTRLDST 321

Query:   324 SGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
             SG YYDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKV
Sbjct:   322 SGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKV 361

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TIGR_CMR|SPO_1942 SPO_1942 "3-deoxy-7-phosphoheptulonate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 159/292 (54%), Positives = 210/292 (71%)

Query:    72 KASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMG 131
             +A  +W    W+ K  +Q+P+Y D+A+L  V   L  FPPLVFAG              G
Sbjct:     8 RAMSEWQKSNWRAKPRVQMPDYTDQAELARVEAQLSQFPPLVFAGEARRLKRHLGAAGRG 67

Query:   132 NAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSD 191
              AFLLQGGDCAESF +F+A+ IRDTF+V+LQM +VL FG ++P+IKVGRMAGQFAKPRS 
Sbjct:    68 EAFLLQGGDCAESFDQFSADGIRDTFKVMLQMAMVLTFGAKVPVIKVGRMAGQFAKPRSA 127

Query:   192 PFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAM 251
             P EV +GV+LPSY+GD IN  AF  ++R+P+P+++++AY Q+AATLNLLR+F+TGG+A M
Sbjct:   128 PTEVLDGVELPSYRGDIINELAFTPEARMPNPQKMLQAYTQAAATLNLLRAFSTGGFADM 187

Query:   252 QRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTST-EFWTSHECLL 310
              RV  W L F +  +   +Y E+A R+ + + FM AAG+T D     ST EF+TSHE LL
Sbjct:   188 NRVHSWTLGFTDEQDV-QKYSEIADRIQDTIDFMGAAGITADTTHQFSTVEFYTSHEGLL 246

Query:   311 LPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
             L YE+ALTR DSTSG +   S HM+W+G+RTRQ DGAHVE+ RG+ NP+G+K
Sbjct:   247 LEYEEALTRLDSTSGNWLAGSGHMIWIGDRTRQPDGAHVEYCRGVLNPIGLK 298

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|CJE_0816 CJE_0816 "3-deoxy-7-phosphoheptulonate synthase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 158/288 (54%), Positives = 197/288 (68%)

Query:    77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLL 136
             WA   WK     Q P YPD+ ++  VL  LE  PPLVFAG                AFLL
Sbjct:     2 WAKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVRNLQKSLARVCKKEAFLL 61

Query:   137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
             QGGDCAESF+ F A NIRD F++LLQM +VL F G  P+IK+GR+AGQFAKPRS  FE  
Sbjct:    62 QGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIKIGRIAGQFAKPRSSDFEEL 121

Query:   197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
             +G+ LPSY+GD ING  F E++R+PDP R++ AY QSA TLNLLR FA GG A +  V +
Sbjct:   122 DGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSATTLNLLRGFAKGGLADLHEVHR 181

Query:   257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGL-TLDHPAMTSTEFWTSHECLLLPYEQ 315
             WNL F + SE   +Y +++ ++ +AL FM A G+ T + P++     +TSHE LLLPYE+
Sbjct:   182 WNLGFLKKSELHKQYTDISEKISQALAFMEACGINTSNTPSLREVSVYTSHEALLLPYEE 241

Query:   316 ALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
             ALTR DS SG+ YDCSAHMLW+GERTR LD AHV FL G+ NPLG+K+
Sbjct:   242 ALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVHFLSGVKNPLGVKI 289

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

ASPGD|ASPL0000049433 AN1673 [Emericella nidulans (taxid:162425)]

 Score = 497 (180.0 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
 Identities = 107/250 (42%), Positives = 147/250 (58%)

Query:    77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLL 136
             W  + W +K   Q   Y D   +++ L+ LE  PPLV                +G AF+L
Sbjct:     6 WNPKSWTSKPIKQDVVYEDVEGVQSALRKLEKLPPLVTTHEIANLKKSLKNVALGKAFVL 65

Query:   137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
             QGGDCAE F   N + I    ++LLQM +VL++G  MP++++ R+AGQFAKPRS+P EV 
Sbjct:    66 QGGDCAELFDYCNQDMIEAKVKLLLQMSLVLIWGANMPVVRIARIAGQFAKPRSNPMEVV 125

Query:   197 NGVKLPSYKGDNING-DAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVT 255
             NGV++PS++GDNING DA  + SR PDP RL+ AY  SAATLN LR+  + G A +    
Sbjct:   126 NGVEMPSFRGDNINGFDATPD-SRRPDPSRLVSAYFHSAATLNYLRASLSSGLADLHSPL 184

Query:   256 QWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQ 315
              W L         ++Y+ + +RV +AL FM   G+  D    T  + +TSHE LLL YE 
Sbjct:   185 DWGLGHVITPSIKEKYERIVNRVKDALRFMQTVGIDTDRGVET-VDIYTSHEGLLLEYET 243

Query:   316 ALTR--RDST 323
             +LTR  +D T
Sbjct:   244 SLTRLLKDPT 253

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G4N683 MGG_08596 "Phospho-2-dehydro-3-deoxyheptonate aldolase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 125/299 (41%), Positives = 178/299 (59%)

Query:    77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLL 136
             WA + W++K   Q PEYPD+  L+     L+  PP+V                 G AFLL
Sbjct:     8 WAPDSWRSKPIKQCPEYPDQEALKKATTQLKRLPPIVHPREIERLKELLSDVAHGKAFLL 67

Query:   137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
             QGGDCAE F     + I    ++LLQM +VL++GG   ++++GRMAGQ+AKPRS P E+ 
Sbjct:    68 QGGDCAELFDYCEQSTIESKIKLLLQMSLVLIWGGNKRVVRIGRMAGQYAKPRSSPTEIV 127

Query:   197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
             +G ++PS++GD +NG   D++    DP R+++AY  S+ATLN +R+  + G A + R   
Sbjct:   128 DGREVPSFRGDILNGFPLDQREL--DPGRMVQAYHHSSATLNYVRASISSGIADLHRPLD 185

Query:   257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA 316
             W L     +    +Y++    + E+L FM   G     P + + E +TSHE LLL YE+ 
Sbjct:   186 WGLGHVRDATLKAKYEQAVDFLTESLRFMQTIGADKS-PNLGTVELYTSHEGLLLEYEEP 244

Query:   317 LTRR-----------DSTSGQ-YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
             LTR            + T+G+ YYD SAH LW+G+RTRQ+DGAHVEF RGIANP+G+KV
Sbjct:   245 LTRLLENPSTATKGDEVTAGKKYYDTSAHFLWIGDRTRQIDGAHVEFFRGIANPIGVKV 303

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|A0R033 aroG "Phospho-2-dehydro-3-deoxyheptonate aldolase AroG" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 132/292 (45%), Positives = 176/292 (60%)

Query:    79 LEGWKTKKALQLPEY-PDKAQ-LETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLL 136
             L+    K A+Q P + PD A+ + TVL   E  PP+                  G AFLL
Sbjct:    26 LDSALAKPAVQQPSWDPDAAKAMRTVL---ESVPPVTVPSEIEKLKGLLADVAQGKAFLL 82

Query:   137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
             QGGDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+AKPRS   +  
Sbjct:    83 QGGDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRSSDVDAL 142

Query:   197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
              G+K  SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  + G A++  V +
Sbjct:   143 -GLK--SYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHE 199

Query:   257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA 316
             WN +F   S  G RY+ LA  +D  L FM+A G+  D    T+ E + SHE L+L YE+A
Sbjct:   200 WNREFVRTSPAGARYEALAGEIDRGLNFMSACGVA-DRNLQTA-EIFASHEALVLDYERA 257

Query:   317 LTRRDS---TSG--QYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
             + R  +   T G  + YD SAH LW+GERTRQLDGAHV F   IANP+G+K+
Sbjct:   258 MLRLSNPAETDGAAKLYDQSAHYLWIGERTRQLDGAHVAFAEVIANPIGVKL 309

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030145 "manganese ion binding" evidence=ISS

UNIPROTKB|O53512 aroG "Phospho-2-dehydro-3-deoxyheptonate aldolase AroG" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 130/302 (43%), Positives = 176/302 (58%)

Query:    67 SSSPAKASGKWALEGWKTKKALQLPEYP-DKA-QLETVLKTLEDFPPLVFAGXXXXXXXX 124
             S  P     +  L+    K A Q P +P D+A  + TVL   E  PP+            
Sbjct:    14 SLPPLPTDLRTRLDAALAKPAAQQPTWPADQALAMRTVL---ESVPPVTVPSEIVRLQEQ 70

Query:   125 XXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQ 184
                   G AFLLQGGDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ
Sbjct:    71 LAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQ 130

Query:   185 FAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFA 244
             +AKPRS   +    + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  
Sbjct:   131 YAKPRSADIDA---LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALT 187

Query:   245 TGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWT 304
             + G A++  V  WN +F   S  G RY+ LA  +D  L FM+A G+  D    T+ E + 
Sbjct:   188 SSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVA-DRNLQTA-EIYA 245

Query:   305 SHECLLLPYEQALTR-RDSTSG--QYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGI 361
             SHE L+L YE+A+ R  D   G  Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+
Sbjct:   246 SHEALVLDYERAMLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGV 305

Query:   362 KV 363
             K+
Sbjct:   306 KL 307


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      373       344   0.00097  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  249 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.10u 0.22s 28.32t   Elapsed:  00:00:01
  Total cpu time:  28.10u 0.22s 28.32t   Elapsed:  00:00:01
  Start:  Sat May 11 05:28:56 2013   End:  Sat May 11 05:28:57 2013

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009423 "chorismate biosynthetic process" evidence=TAS

GO:0030145 "manganese ion binding" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0051260 "protein homooligomerization" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P29976	AROF_ARATH	2, ., 5, ., 1, ., 5, 4	0.7459	0.9865	0.7009	yes	no
P80574	AROF_STRCO	2, ., 5, ., 1, ., 5, 4	0.5496	0.7506	0.6222	yes	no
P27608	AROF_TOBAC	2, ., 5, ., 1, ., 5, 4	0.7699	0.8766	0.6033	N/A	no
P37215	AROF_SOLLC	2, ., 5, ., 1, ., 5, 4	0.7936	0.8847	0.6457	N/A	no
P37216	AROG_SOLLC	2, ., 5, ., 1, ., 5, 4	0.7225	0.9544	0.6580	N/A	no
P37822	AROG_SOLTU	2, ., 5, ., 1, ., 5, 4	0.7877	0.8847	0.6457	N/A	no
P21357	AROF_SOLTU	2, ., 5, ., 1, ., 5, 4	0.7198	0.9544	0.6617	N/A	no
Q75W16	AROG_ORYSJ	2, ., 5, ., 1, ., 5, 4	0.7750	0.8471	0.5862	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.5.1.54	0.946
3rd Layer	2.5.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
PLN02291	474	PLN02291, PLN02291, phospho-2-dehydro-3-deoxyhepto	0.0
pfam01474	437	pfam01474, DAHP_synth_2, Class-II DAHP synthetase	0.0
TIGR01358	443	TIGR01358, DAHP_synth_II, 3-deoxy-7-phosphoheptulo	1e-177
COG3200	445	COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-p	1e-160

>gnl|CDD|177928 PLN02291, PLN02291, phospho-2-dehydro-3-deoxyheptonate aldolase

 Score =  667 bits (1722), Expect = 0.0
 Identities = 265/313 (84%), Positives = 284/313 (90%), Gaps = 7/313 (2%)

Query: 51  VHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFP 110
           VHAA+P+K          S A    KW+ + W++KKALQLPEYPD+A+LE VLKTLE FP
Sbjct: 1   VHAAEPSKTPV-------SSAGGPKKWSPDSWRSKKALQLPEYPDQAELEEVLKTLEAFP 53

Query: 111 PLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFG 170
           PLVFAGEARSLEERLAEAAMG AFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFG
Sbjct: 54  PLVFAGEARSLEERLAEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFG 113

Query: 171 GQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAY 230
           GQMP++KVGRMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR PDP+R++RAY
Sbjct: 114 GQMPVVKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRRPDPQRMVRAY 173

Query: 231 CQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGL 290
            QSAATLNLLR+FATGGYAAMQRVTQWNLDF EHSEQGDRY+ELAHRVDEALGFMAA GL
Sbjct: 174 SQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAACGL 233

Query: 291 TLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVE 350
           T DHP MT+TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGERTRQLDGAHVE
Sbjct: 234 TTDHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVE 293

Query: 351 FLRGIANPLGIKV 363
           FLRG+ANPLGIKV
Sbjct: 294 FLRGVANPLGIKV 306

Length = 474

>gnl|CDD|216520 pfam01474, DAHP_synth_2, Class-II DAHP synthetase family

 Score =  545 bits (1407), Expect = 0.0
 Identities = 184/288 (63%), Positives = 224/288 (77%), Gaps = 1/288 (0%)

Query: 76  KWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFL 135
           +W  + W++K A Q PEYPD A L  VL  L   PPLVFAGE R L+E+LA+ A G AFL
Sbjct: 1   EWTPDSWRSKPAAQQPEYPDPAALAAVLAELASLPPLVFAGEIRRLKEQLADVARGEAFL 60

Query: 136 LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEV 195
           LQGGDCAESF EF A++IRD F+VLLQM VVL +G   P++KVGR+AGQFAKPRS   E 
Sbjct: 61  LQGGDCAESFAEFTADHIRDKFKVLLQMAVVLTYGAGKPVVKVGRIAGQFAKPRSSDTET 120

Query: 196 KNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVT 255
            +GV LPSY+GD ING  F E++R PDP+RL+RAY QSAATLNLLR+FA GGYA + +V 
Sbjct: 121 VDGVTLPSYRGDIINGPEFTEEARRPDPQRLLRAYHQSAATLNLLRAFAQGGYADLHQVH 180

Query: 256 QWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQ 315
            WNL F ++S  G+RY+ELA R+DEAL FM A G+    P + + +F+TSHE LLLPYE+
Sbjct: 181 DWNLGFVKNSPLGERYEELADRIDEALRFMEACGID-TTPQLRTVDFYTSHEALLLPYEE 239

Query: 316 ALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           ALTR DST+G++YD SAH LW+GERTRQLDGAHVEFLRGIANP+G+KV
Sbjct: 240 ALTRVDSTTGEWYDTSAHFLWIGERTRQLDGAHVEFLRGIANPIGVKV 287

Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway. Length = 437

>gnl|CDD|130425 TIGR01358, DAHP_synth_II, 3-deoxy-7-phosphoheptulonate synthase, class II

 Score =  499 bits (1286), Expect = e-177
 Identities = 179/287 (62%), Positives = 221/287 (77%), Gaps = 1/287 (0%)

Query: 77  WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLL 136
           W+ + W++K A Q P YPD   LE VL TL   PPLVFAGE R L+ +LA+ A G AFLL
Sbjct: 1   WSPQSWRSKPAAQQPTYPDAGALEAVLDTLRSLPPLVFAGEIRRLKRQLAQVAEGEAFLL 60

Query: 137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
           QGGDCAESFK+  A++IR+  RVLLQM VVL +G  +P++KVGR+AGQ+AKPRS P E +
Sbjct: 61  QGGDCAESFKDCTADHIRNKLRVLLQMAVVLTYGASLPVVKVGRIAGQYAKPRSAPTETR 120

Query: 197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
           +GV LPSY+GD ING AF E +RVPDP RL+RAY QSAATLNL+R+  TGGYA + +V  
Sbjct: 121 DGVTLPSYRGDIINGPAFTEAARVPDPRRLVRAYHQSAATLNLVRALTTGGYADLHQVHY 180

Query: 257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA 316
           WNL+F  +S  G RY++LA  +DEAL FM+A GL   +  + + EF+TSHE LLLPYE+A
Sbjct: 181 WNLEFVGYSPAGARYEKLASEIDEALRFMSACGLAPRY-NLQTVEFYTSHEALLLPYEEA 239

Query: 317 LTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           LTR DS SG ++D SAHMLW+GERTRQLDGAHVEFLRG+ NP+GIKV
Sbjct: 240 LTRVDSRSGGWFDLSAHMLWIGERTRQLDGAHVEFLRGVRNPIGIKV 286

This model represents the class II family of 3-deoxy-7-phosphoheptulonate synthase, aka phospho-2-dehydro-3-deoxyheptonate aldolase, as found in plants and some bacteria. It shows some similarity to the class I family found in many bacteria. The enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog [Amino acid biosynthesis, Aromatic amino acid family]. Length = 443

>gnl|CDD|225741 COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]

 Score =  455 bits (1173), Expect = e-160
 Identities = 179/288 (62%), Positives = 214/288 (74%), Gaps = 1/288 (0%)

Query: 76  KWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFL 135
            W    W+ K   Q P YPD   L  V   L  +PPLVFAGEAR L+E+LA  A G AFL
Sbjct: 4   TWLPNSWRAKPIQQQPTYPDAQALARVEARLRSYPPLVFAGEARRLQEQLARVAKGEAFL 63

Query: 136 LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEV 195
           LQGGDCAESF +  A+NIRD FRVLLQM VVL F G  P++KVGR+AGQFAKPRS   E 
Sbjct: 64  LQGGDCAESFADHGADNIRDNFRVLLQMAVVLTFAGSRPVVKVGRIAGQFAKPRSSDHEQ 123

Query: 196 KNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVT 255
             GV LPSY+GD ING  FD ++R PDPERL++AY QSAATLNLLR+FA+GG A ++ V 
Sbjct: 124 LGGVTLPSYRGDIINGIEFDAEAREPDPERLLKAYAQSAATLNLLRAFASGGLADLENVH 183

Query: 256 QWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQ 315
           +WNL F ++S QG RY+ LA R+ E L FM A G+T D P++  TEF+TSHE LLL YE+
Sbjct: 184 RWNLGFVKNSPQGARYEALADRISETLAFMRACGVTND-PSLRETEFYTSHEALLLDYEE 242

Query: 316 ALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           A+ R DSTSGQ+YD SAHMLW+GERTRQ DGAHVEFLRG+ NP+G+K+
Sbjct: 243 AMLRLDSTSGQWYDTSAHMLWIGERTRQPDGAHVEFLRGVKNPIGVKI 290

Length = 445

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
PLN02291	474	phospho-2-dehydro-3-deoxyheptonate aldolase	100.0
TIGR01358	443	DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthas	100.0
PF01474	439	DAHP_synth_2: Class-II DAHP synthetase family; Int	100.0
COG3200	445	AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (	100.0

>PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase

Probab=100.00  E-value=1.1e-139  Score=1051.08  Aligned_cols=298  Identities=87%  Similarity=1.361  Sum_probs=293.8

Q ss_pred             CCCCCcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHH
Q 017323           75 GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIR  154 (373)
Q Consensus        75 ~~Wsp~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~  154 (373)
                      ..|+|+|||++||+|||+|||+++|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|+||++++|+
T Consensus        18 ~~W~p~sWr~~pa~QqP~y~D~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~LA~va~G~AFlLQgGDCAE~F~~~~~~~ir   97 (474)
T PLN02291         18 KKWSPDSWRSKKALQLPEYPDQAELEEVLKTLEAFPPLVFAGEARSLEERLAEAAMGRAFLLQGGDCAESFKEFNANNIR   97 (474)
T ss_pred             CCCChhhhhcCccccCCCCCCHHHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHHhcCCeEEEeCCchhhhhhhhCHHHHH
Confidence            44999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHH
Q 017323          155 DTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA  234 (373)
Q Consensus       155 ~k~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~Sa  234 (373)
                      +|+++|+|||.||++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||+||+
T Consensus        98 ~k~~~llqMa~vL~~~~~~PVVkVGRiAGQyAKPRSs~~E~~dGv~LPsYRGD~VN~~e~t~~aR~PDP~Rll~aY~~Sa  177 (474)
T PLN02291         98 DTFRVLLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRRPDPQRMVRAYSQSA  177 (474)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeEEecccccccCCCCCCCcccCCCEeccccCCccccCcCCCHhhcCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccc
Q 017323          235 ATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYE  314 (373)
Q Consensus       235 aTLn~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE  314 (373)
                      +|||+||+|..|||||||++++||++|+++++.+++|++++++|++||+||++||++.++..+++++||||||||||+||
T Consensus       178 atlnllRa~~~gg~adl~~~~~W~~~fv~~~~~~~~y~~la~~i~~al~fm~a~g~~~~~~~l~~~~~yTSHEaLlL~YE  257 (474)
T PLN02291        178 ATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAACGLTTDHPIMTTTEFWTSHECLLLPYE  257 (474)
T ss_pred             HHHHHHHHHhcCCchhhccccccchhhhccCchhhHHHHHHHHHHHHHHHHHHcCCCccccccccCceeechHhhccchh
Confidence            99999999999999999999999999999999999999999999999999999999988556889999999999999999


Q ss_pred             cccccccCCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          315 QALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       315 ~aLtR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      +||||.|+.+|.|||||||||||||||||||||||||||||+|||||||||+|+||++
T Consensus       258 ~altR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVef~rgI~NPIGvKvGPs~~pdel  315 (474)
T PLN02291        258 QALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPEEL  315 (474)
T ss_pred             hhhhccCCCCCCcccccccccccccccCCCCccHHHHHhcCCCCeeEEECCCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999986

>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II

Probab=100.00  E-value=4.2e-139  Score=1042.37  Aligned_cols=295  Identities=61%  Similarity=1.027  Sum_probs=292.2

Q ss_pred             CCCcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHHHH
Q 017323           77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDT  156 (373)
Q Consensus        77 Wsp~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~~k  156 (373)
                      |+|+|||++||+|||+|||+++|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|+||++++|++|
T Consensus         1 w~p~sWr~~pa~QqP~y~D~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~La~va~G~aFlLQgGDCAE~F~~~~~~~i~~k   80 (443)
T TIGR01358         1 WSPQSWRSKPAAQQPTYPDAGALEAVLDTLRSLPPLVFAGEIRRLKRQLAQVAEGEAFLLQGGDCAESFKDCTADHIRNK   80 (443)
T ss_pred             CCchhhhcCccccCCCCCCHHHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHHhCCCEEEEeCccccCchhhcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 017323          157 FRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAAT  236 (373)
Q Consensus       157 ~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~SaaT  236 (373)
                      +++|+|||.||++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||+||++|
T Consensus        81 ~~~llqMa~vl~~~~~~PVVkVGRiAGQyAKPRS~~~E~~~G~~LPsYRGD~VN~~e~t~~aR~PDP~Rll~aY~~saat  160 (443)
T TIGR01358        81 LRVLLQMAVVLTYGASLPVVKVGRIAGQYAKPRSAPTETRDGVTLPSYRGDIINGPAFTEAARVPDPRRLVRAYHQSAAT  160 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCeEEecccccccCCCCCCCcccCCCEeccccCCccccCcCCChhhcCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccccc
Q 017323          237 LNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA  316 (373)
Q Consensus       237 Ln~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE~a  316 (373)
                      ||+||+|..|||||||++++||++|+++++.+++|++++++|+++|+||++||++.++ .+++++||||||||||+||+|
T Consensus       161 ln~lRa~~~gg~adl~~~~~W~~~f~~~~~~~~~y~~la~~i~~al~fm~a~g~~~~~-~l~~~~~~TSHEaLlL~YE~a  239 (443)
T TIGR01358       161 LNLVRALTTGGYADLHQVHYWNLEFVGYSPAGARYEKLASEIDEALRFMSACGLAPRY-NLQTVEFYTSHEALLLPYEEA  239 (443)
T ss_pred             HHHHHHHhcCCchhhcccchhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHcCCCccc-ccCcCceeechHhhccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999886 689999999999999999999


Q ss_pred             cccccCCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          317 LTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       317 LtR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      |||.|+.+|.|||||||||||||||||||||||||||||+|||||||||+|+||++
T Consensus       240 ltR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVef~rgI~NPIGvKvGP~~~p~~l  295 (443)
T TIGR01358       240 LTRVDSRSGGWFDLSAHMLWIGERTRQLDGAHVEFLRGVRNPIGIKVGPSMTPDEL  295 (443)
T ss_pred             hhcccCCCCCcccccccccccccccCCCCchHHHHHhcCCCCeeEEECCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999986

Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.

>PF01474 DAHP_synth_2: Class-II DAHP synthetase family; InterPro: IPR002480 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family (2

Probab=100.00  E-value=2.1e-137  Score=1029.34  Aligned_cols=297  Identities=59%  Similarity=1.030  Sum_probs=239.6

Q ss_pred             CCCCcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHHH
Q 017323           76 KWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRD  155 (373)
Q Consensus        76 ~Wsp~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~~  155 (373)
                      +|+|+|||++||+|||+|||+.+|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|+||++++|++
T Consensus         1 ~W~p~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~~~Ei~~Lr~~La~va~G~AFlLQgGDCAEsF~e~~~~~I~~   80 (439)
T PF01474_consen    1 EWSPSSWRSKPAAQQPEYPDPDALAEVLAKLASLPPLVFAGEIRRLREQLADVARGEAFLLQGGDCAESFAECTADHIRD   80 (439)
T ss_dssp             ---HHHHHTS--SS---S-HHHHH-HHHHHHTTS--SS-HHHHHHHHHHHHHHHTTSSEEEEEEESS--STT-SHHHHHH
T ss_pred             CCChhhHHhCCcccCCCCcCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHcCCeEEEeCCCcccChhhcChHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017323          156 TFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAA  235 (373)
Q Consensus       156 k~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~Saa  235 (373)
                      |+++|+|||.||++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||++|++
T Consensus        81 k~~~Llqma~vL~~~~~~PVVrVGRiAGQyAKPRS~~~E~vdG~~LPsyRGD~VN~~~~~~~aR~PDP~RlL~aY~~Saa  160 (439)
T PF01474_consen   81 KFKLLLQMALVLTYGAGKPVVRVGRIAGQYAKPRSSPTETVDGVELPSYRGDIVNGPEFTPEARRPDPQRLLRAYFHSAA  160 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTS-EEEEEEBSS------S-SB----TTSSB----TTTS-SSSSHHHHS--THHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCeEEechhhhcccCCCCCCccCCCCccCcccccccccCCCCChhhcCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCC-CCCCCccceeecccccccccc
Q 017323          236 TLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLD-HPAMTSTEFWTSHECLLLPYE  314 (373)
Q Consensus       236 TLn~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~-~~~~~~~~~~TSHEaLLL~YE  314 (373)
                      |||+||+|++||||||+++++||++|+++++.+++|++++++|++||+||++||++.+ ++.+.+++||||||||||+||
T Consensus       161 tLn~lRa~~~~G~Adl~~~~~W~~~fv~~s~~~~~y~~~~~~i~~al~Fm~a~g~~~~~~~~~~~~~~~tSHEaLlL~YE  240 (439)
T PF01474_consen  161 TLNLLRAFASGGFADLHHVHQWNLDFVRNSPLGERYEELADEIDDALRFMRACGVDSDSSPALRTVDFYTSHEALLLDYE  240 (439)
T ss_dssp             HHHHHHHHHTSCCG-HHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTT-----GGGST---EEEEEE---HHHH
T ss_pred             HHHHHHHHhcCChhhhcccccchhhhhcCChhhhHHHHHHHHHHHHHHHHHHcCCCccccccccccccccchHHhhhhhh
Confidence            9999999999999999999999999999999999999999999999999999999976 567899999999999999999


Q ss_pred             cccccccCCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          315 QALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       315 ~aLtR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      +||||.|+.+|.||+||||||||||||||+|||||||||||+|||||||||+|+||++
T Consensus       241 ~altR~d~~~g~~y~~SaH~~WIGeRTRq~dgAHve~~~gi~NPigvKvGP~~~~~~l  298 (439)
T PF01474_consen  241 EALTRQDSDTGRWYNTSAHFLWIGERTRQLDGAHVEFLRGIANPIGVKVGPSMTPEEL  298 (439)
T ss_dssp             HHTEEEESSSEEEEETT-SEEEE-TTT--TTSHHHHHHHHB-S-EEEEE-TT--HHHH
T ss_pred             hhhccccCCCCCccccccceeeecccccCCchhHHHHHhhccCccceeeCCCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999985

5.1.54 from EC) catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I (see IPR006218 from INTERPRO) includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products.; GO: 0003849 3-deoxy-7-phosphoheptulonate synthase activity, 0009073 aromatic amino acid family biosynthetic process; PDB: 3NUD_A 3KGF_A 2W19_A 3NUE_B 3PFP_A 2B7O_B 3RZI_A 3NV8_B 2W1A_A.

>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.8e-134  Score=985.49  Aligned_cols=297  Identities=60%  Similarity=1.003  Sum_probs=293.3

Q ss_pred             CCCCCcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHH
Q 017323           75 GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIR  154 (373)
Q Consensus        75 ~~Wsp~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~  154 (373)
                      ..|+|.||+.||++|||.|||..+|+.|.++|+++|||||++|+++||++||+||.|+|||||||||||+|+++++++||
T Consensus         3 ~~w~p~swr~kpi~Q~p~ypd~~~l~~v~a~L~~~PplvfAgEar~Lk~~LA~Va~g~AfLLQgGDCAEsf~~~~a~~Ir   82 (445)
T COG3200           3 TTWLPNSWRAKPIQQQPTYPDAQALARVEARLRSYPPLVFAGEARRLQEQLARVAKGEAFLLQGGDCAESFADHGADNIR   82 (445)
T ss_pred             cccCcchhhcCchhcCCCCCCHHHHHHHHHHHhcCCCeeecHHHHHHHHHHHHHhcCceEEEeCCcHHHHHHhcccHHHH
Confidence            35999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHH
Q 017323          155 DTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA  234 (373)
Q Consensus       155 ~k~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~Sa  234 (373)
                      ++|++|+|||.||+|++++|||||||||||||||||+++|+.+|++|||||||||||.+|++++|+|||+||++||.+|+
T Consensus        83 d~frvllqMAvVLtfa~~~PVvKVgRIAGQfAKPRSs~~e~~g~vtLpsYRGDiiNG~e~~~~~R~pdP~R~l~aY~qsa  162 (445)
T COG3200          83 DNFRVLLQMAVVLTFAGSRPVVKVGRIAGQFAKPRSSDHEQLGGVTLPSYRGDIINGIEFDAEAREPDPERLLKAYAQSA  162 (445)
T ss_pred             HHHHHHHHHHHHHHhccCCceEEeeeecccccCCCCCchhccCCeeccccccccccCccCChhhcCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccc
Q 017323          235 ATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYE  314 (373)
Q Consensus       235 aTLn~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE  314 (373)
                      +|||+||+|++||||||+.+|+||++||++|++++||+.++++|+++|+||++||++.+ |.++.++||||||||||+||
T Consensus       163 AtlNLlRafa~gG~A~L~~vh~W~l~Fv~~sp~~~rY~~la~~I~~~l~FM~A~Gv~~~-~~lre~~~ytSHEaLLL~YE  241 (445)
T COG3200         163 ATLNLLRAFASGGLADLENVHRWNLGFVKNSPQGARYEALADRISETLAFMRACGVTND-PSLRETEFYTSHEALLLDYE  241 (445)
T ss_pred             HHHHHHHHHhccccchHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccccchhhhHHHhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999984 77899999999999999999


Q ss_pred             cccccccCCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          315 QALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       315 ~aLtR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      +||||.|+.+|.||+|||||+||||||||+|||||||+|||.|||||||||+++||++
T Consensus       242 eam~R~ds~s~~~Yd~SaHmlWIGeRTRq~D~AHVe~~rgv~NPig~K~GP~~~~d~l  299 (445)
T COG3200         242 EAMLRLDSTSGQWYDTSAHMLWIGERTRQPDGAHVEFLRGVKNPIGVKIGPSMTPDEL  299 (445)
T ss_pred             HHHhhhccCCCceeccccceeeecccccCCChhHHHHHHhcCCccccccCCCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
2w19_A	472	Non-Covalent Complex Between Dahp Synthase And Chor		4e-61
3rzi_A	462	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		4e-61
3kgf_A	464	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		5e-61
2b7o_A	464	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		1e-54

>pdb|2W19|A Chain A, Non-Covalent Complex Between Dahp Synthase And Chorismate Mutase From Mycobacterium Tuberculosis Length = 472

Iteration: 1
 Score =  231 bits (590), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 122/288 (42%), Positives = 168/288 (58%), Gaps = 9/288 (3%)
Query: 79  LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQG 138
           L+    K A Q P +P    L  +   LE  PP+                  G AFLLQG
Sbjct: 36  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 94
Query: 139 GDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNG 198
           GDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+AKPRS      + 
Sbjct: 95  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DA 151
Query: 199 VKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWN 258
           + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  + G A++  V  WN
Sbjct: 152 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 211
Query: 259 LDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALT 318
            +F   S  G RY+ LA  +D  L FM+A G+   +  + + E + SHE L+L YE+A+ 
Sbjct: 212 REFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAML 269
Query: 319 RR---DSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           R    D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K+
Sbjct: 270 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKL 317

>pdb|3RZI|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Cocrystallized And Complexed With Phenylalanine And Tryptophan Length = 462

Iteration: 1
 Score =  231 bits (590), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 122/288 (42%), Positives = 168/288 (58%), Gaps = 9/288 (3%)
Query: 79  LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQG 138
           L+    K A Q P +P    L  +   LE  PP+                  G AFLLQG
Sbjct: 26  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84
Query: 139 GDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNG 198
           GDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+AKPRS      + 
Sbjct: 85  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DA 141
Query: 199 VKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWN 258
           + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  + G A++  V  WN
Sbjct: 142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201
Query: 259 LDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALT 318
            +F   S  G RY+ LA  +D  L FM+A G+   +  + + E + SHE L+L YE+A+ 
Sbjct: 202 REFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAML 259
Query: 319 RR---DSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           R    D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K+
Sbjct: 260 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKL 307

>pdb|3KGF|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Complexed With Phenylalanine And Tryptophan Length = 464

Iteration: 1
 Score =  231 bits (589), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 122/288 (42%), Positives = 168/288 (58%), Gaps = 9/288 (3%)
Query: 79  LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQG 138
           L+    K A Q P +P    L  +   LE  PP+                  G AFLLQG
Sbjct: 28  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 86
Query: 139 GDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNG 198
           GDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+AKPRS      + 
Sbjct: 87  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DA 143
Query: 199 VKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWN 258
           + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  + G A++  V  WN
Sbjct: 144 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 203
Query: 259 LDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALT 318
            +F   S  G RY+ LA  +D  L FM+A G+   +  + + E + SHE L+L YE+A+ 
Sbjct: 204 REFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAML 261
Query: 319 RR---DSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           R    D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K+
Sbjct: 262 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKL 309

>pdb|2B7O|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Length = 464

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 163/288 (56%), Gaps = 9/288 (3%)
Query: 79  LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQG 138
           L+    K A Q P +P    L      LE  PP+                  G AFLLQG
Sbjct: 28  LDAALAKPAAQQPTWPADQAL-AXRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 86
Query: 139 GDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNG 198
           GDCAE+F +    +IR   R LLQ  VVL +G   P++KV R+AGQ+AKPRS      + 
Sbjct: 87  GDCAETFXDNTEPHIRGNVRALLQXAVVLTYGASXPVVKVARIAGQYAKPRSADI---DA 143
Query: 199 VKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWN 258
           + L SY+GD ING A D  +R  DP RL+RAY  ++A  NL+R+  + G A++  V  WN
Sbjct: 144 LGLRSYRGDXINGFAPDAAAREHDPSRLVRAYANASAAXNLVRALTSSGLASLHLVHDWN 203
Query: 259 LDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA-- 316
            +F   S  G RY+ LA  +D  L F +A G+   +  + + E + SHE L+L YE+A  
Sbjct: 204 REFVRTSPAGARYEALATEIDRGLRFXSACGVADRN--LQTAEIYASHEALVLDYERAXL 261
Query: 317 -LTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
            L+  D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K+
Sbjct: 262 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKL 309

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
3rzi_A	462	Probable 3-deoxy-D-arabino-heptulosonate 7-phosph	1e-109

>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A* Length = 462

 Score =  326 bits (836), Expect = e-109
 Identities = 130/301 (43%), Positives = 180/301 (59%), Gaps = 9/301 (2%)

Query: 66  SSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERL 125
            S  P     +  L+    K A Q P +P    L  +   LE  PP+    E   L+E+L
Sbjct: 13  PSLPPLPTDLRTRLDAALAKPAAQQPTWPADQALA-MRTVLESVPPVTVPSEIVRLQEQL 71

Query: 126 AEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQF 185
           A+ A G AFLLQGGDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+
Sbjct: 72  AQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQY 131

Query: 186 AKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFAT 245
           AKPRS      + + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  +
Sbjct: 132 AKPRSADI---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTS 188

Query: 246 GGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTS 305
            G A++  V  WN +F   S  G RY+ LA  +D  L FM+A G+   +  + + E + S
Sbjct: 189 SGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYAS 246

Query: 306 HECLLLPYEQALTR---RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
           HE L+L YE+A+ R    D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K
Sbjct: 247 HEALVLDYERAMLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVK 306

Query: 363 V 363
           +
Sbjct: 307 L 307

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
3rzi_A	462	Probable 3-deoxy-D-arabino-heptulosonate 7-phosph	100.0
3tqk_A	346	Phospho-2-dehydro-3-deoxyheptonate aldolase; trans	93.52
3tml_A	288	2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid,	88.79
3sz8_A	285	2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgci	85.49
3fs2_A	298	2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid,	83.85

>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*

Probab=100.00  E-value=3e-136  Score=1022.52  Aligned_cols=288  Identities=44%  Similarity=0.747  Sum_probs=281.6

Q ss_pred             CcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHHHHHH
Q 017323           79 LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFR  158 (373)
Q Consensus        79 p~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~~k~~  158 (373)
                      ++|||++|++|||.|| +++|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|++|++++|++|++
T Consensus        26 ~~sWr~~pa~QqP~yp-~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~La~va~G~AFlLQGGDCAEsF~~~~~~~ir~k~~  104 (462)
T 3rzi_A           26 LDAALAKPAAQQPTWP-ADQALAMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVR  104 (462)
T ss_dssp             HHHHHTSCCTTCCCCC-HHHHHHHHHHHTTSCCSSCHHHHHHHHHHHHHHHTTSCEEEEEECSSCCSTTCCHHHHHHHHH
T ss_pred             ccchhhCCcccCCCCC-HHHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHHCCCEEEEeCccccCChhhcChHHHHHHHH
Confidence            4799999999999999 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017323          159 VLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLN  238 (373)
Q Consensus       159 ~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~SaaTLn  238 (373)
                      +|+|||+||++++++|||||||||||||||||+++|   |++||||||||||+.+||+++|+|||+|||+||++|++|||
T Consensus       105 ~llqMa~vLt~g~~~PVVkvGRiAGQfAKPRSs~~E---Gv~LPsYRGD~VNg~~f~~~aR~PDP~Rll~aY~~SaatlN  181 (462)
T 3rzi_A          105 ALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADID---ALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMN  181 (462)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECSCCCCCCCSCSBC---TTSSBCCCCTTTSCSSSSHHHHSCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCeEEecccccccCCCCCCCcC---CCcccccCCccccCCCCChhhcCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999   99999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccccccc
Q 017323          239 LLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALT  318 (373)
Q Consensus       239 ~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE~aLt  318 (373)
                      +||+|++|||||||++++||++|+++++.+++|++++++|++||+||++||++.+  .+.+++||||||||||+||+|||
T Consensus       182 llRa~~~gG~Adl~~~~~W~~~fv~~s~~~~~y~~la~~i~~al~Fm~a~G~~~~--~l~~~~~ytSHEaLlL~YE~alt  259 (462)
T 3rzi_A          182 LVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVADR--NLQTAEIYASHEALVLDYERAML  259 (462)
T ss_dssp             HHHHHHHTTTTCHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTCCCG--GGSCCCCEEEEECCCHHHHHHTE
T ss_pred             HHHHhccCChhhhhccccchhhhcccChhhhHHHHHHHHHHHHHHHHHHcCCCcc--cccccceeechHhhccchhhhhh
Confidence            9999999999999999999999999999999999999999999999999999987  57899999999999999999999


Q ss_pred             ccc---CCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          319 RRD---STSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       319 R~d---~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      |.|   +.+|.|||||||||||||||||||||||||||||+|||||||||+|+||++
T Consensus       260 R~d~~~~~~g~~Y~~SaH~lWIGeRTRqlDgAHVef~rgI~NPIGvKvGP~~~p~el  316 (462)
T 3rzi_A          260 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELA  316 (462)
T ss_dssp             EECCC----CCEEETTCSEEEECTTTCCTTSHHHHHHHHCCSCEEEEECTTCCHHHH
T ss_pred             cccccCCCCCCccccccccceeccccCCCCccHHHHHhcCCCCeeEeECCCCCHHHH
Confidence            999   889999999999999999999999999999999999999999999999985

>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}

Probab=93.52  E-value=1.1  Score=44.26  Aligned_cols=159  Identities=24%  Similarity=0.302  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHhCCC--eeEEecCCccchhhccChhhHHHHHHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCccc
Q 017323          117 EARSLEERLAEAAMGN--AFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFE  194 (373)
Q Consensus       117 Ei~~Lr~~LA~vA~G~--aFlLQGGDCAEsF~e~~~~~I~~k~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E  194 (373)
                      -|..=|+.+.++-.|+  .|++=.|=|+=-    +++.+.+-.+-|..++.-+.. ...-|.|     |-|-|||++   
T Consensus        32 ~v~~~R~~i~~Il~G~d~rllVIaGPCSie----d~eq~leyA~~Lk~~~~~~~d-~l~~vmR-----~y~~KPRTs---   98 (346)
T 3tqk_A           32 TVRKSRKEIANIIHGNDDRVAVVVGPCSIH----DPAAAIEYATKLKEQVKKFHK-DILIIMR-----VYFEKPRTT---   98 (346)
T ss_dssp             HHHHHHHHHHHHHHTSSCSEEEEEECSSCS----CHHHHHHHHHHHHHHHHHHTT-TEEEEEE-----CCCCCCCSS---
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEEecCccC----CHHHHHHHHHHHHHHHhhhcc-cceEEee-----ecccCCCCC---
Confidence            3555688899998886  599999999643    455555555555555544332 1122444     558899987   


Q ss_pred             ccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCcccccccccchhhhhccCchhhHHHHH
Q 017323          195 VKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQEL  274 (373)
Q Consensus       195 ~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~SaaTLn~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~  274 (373)
                             +.|.| ++|+|..+-.   +|   +.       .-|..+|.|.                              
T Consensus        99 -------~g~kG-L~nDP~ld~s---~~---i~-------~GL~~~R~ll------------------------------  127 (346)
T 3tqk_A           99 -------IGWKG-FINDPDLDNS---YN---IN-------KGLRLARNLL------------------------------  127 (346)
T ss_dssp             -------CSCCC-TTTCTTSSSC---CC---HH-------HHHHHHHHHH------------------------------
T ss_pred             -------cCccc-cccCCCCCCC---cc---HH-------HHHHHHHHHH------------------------------
Confidence                   35777 6677554422   11   22       2333333211                              


Q ss_pred             HHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccccccccccCCCCCcccCCCCceeeccccCCCCchhHHHhhh
Q 017323          275 AHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRG  354 (373)
Q Consensus       275 ~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE~aLtR~d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrg  354 (373)
                              .-....|+...      +      |.|           |+.+-.|..----|.|||-||-| .--|-|..+|
T Consensus       128 --------~~~~e~GLpia------t------E~l-----------d~~~~qyv~dlvs~~aIGARt~e-nq~hre~asg  175 (346)
T 3tqk_A          128 --------SDLTNMGLPCA------T------EFL-----------DVITPQYFAELITWGAIGARTVE-SQVHRELASG  175 (346)
T ss_dssp             --------HHHHHTTCCEE------E------ECC-----------SSSGGGGTGGGCSEEEECGGGTT-CHHHHHHHTT
T ss_pred             --------HHHHhcCCCEE------E------Eec-----------CcCCHHHHHHHhheeeeCccccc-CHHHHHHhcC
Confidence                    00122343211      1      211           11112233222448899999999 5799999999


Q ss_pred             ccCcceeeeCCCCCccc
Q 017323          355 IANPLGIKVFAIWDLFV  371 (373)
Q Consensus       355 I~NPIGvKvGPs~tp~~  371 (373)
                      +.-|||+|=|-+.+.++
T Consensus       176 ~s~PVg~Kngt~gti~~  192 (346)
T 3tqk_A          176 LSASIGFKNATNGDVQV  192 (346)
T ss_dssp             CSSEEEEECCTTCCSHH
T ss_pred             CCCceEEeCCCCCchHH
Confidence            99999999998887664

>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A

Probab=88.79  E-value=0.56  Score=45.07  Aligned_cols=39  Identities=18%  Similarity=0.111  Sum_probs=31.7

Q ss_pred             CCceeecccc-CCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          332 AHMLWVGERT-RQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       332 aH~lWIGeRT-RqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      .-++|||-|- |+.+  ++..+.+..-||++|=|-+++++||
T Consensus       108 vd~lkIgA~~~~n~~--LLr~~a~~gkPVilK~G~~~t~~e~  147 (288)
T 3tml_A          108 VDVLQTPAFLCRQTD--FIHACARSGKPVNIKKGQFLAPHDM  147 (288)
T ss_dssp             CSEEEECGGGTTCHH--HHHHHHTSSSCEEEECCTTCCTTHH
T ss_pred             CCEEEECcccccCHH--HHHHHHccCCcEEEeCCCCCCHHHH
Confidence            4489999964 4444  6777899999999999999999876

>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*

Probab=85.49  E-value=2.2  Score=40.95  Aligned_cols=39  Identities=23%  Similarity=0.176  Sum_probs=32.7

Q ss_pred             CCceeecccc-CCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          332 AHMLWVGERT-RQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       332 aH~lWIGeRT-RqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      .-++|||-|. |+.+  ++..+.+..-||++|=|-+++++||
T Consensus       111 vd~lqIgA~~~~n~~--LLr~va~~gkPVilK~G~~~t~~ei  150 (285)
T 3sz8_A          111 ADVLQVPAFLARQTD--LVVAIAKAGKPVNVKKPQFMSPTQL  150 (285)
T ss_dssp             CSEEEECGGGTTCHH--HHHHHHHTSSCEEEECCTTSCGGGT
T ss_pred             CCEEEECccccCCHH--HHHHHHccCCcEEEeCCCCCCHHHH
Confidence            4489999964 4444  8888999999999999999999887

>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}

Probab=83.85  E-value=2.2  Score=41.24  Aligned_cols=39  Identities=13%  Similarity=0.037  Sum_probs=32.4

Q ss_pred             CCceeecccc-CCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          332 AHMLWVGERT-RQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       332 aH~lWIGeRT-RqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      .-++|||-|- |+.+  .+..+.+..-||++|=|-+++++||
T Consensus       132 vd~lkIgA~~~~n~~--LLr~va~~gkPVilK~Gms~t~~ei  171 (298)
T 3fs2_A          132 VDVLQIPAFLCRQTD--LLIAAARTGRVVNVKKGQFLAPWDM  171 (298)
T ss_dssp             CSEEEECGGGTTCHH--HHHHHHHTTSEEEEECCTTCCGGGH
T ss_pred             CCEEEECccccCCHH--HHHHHHccCCcEEEeCCCCCCHHHH
Confidence            4589999964 4444  7778899999999999999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	373
d2b7oa1	462	c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,	1e-139

>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]} Length = 462

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class-II DAHP synthetase
domain: Probable DAHP synthetase AroG, phenylalanine-repressible
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  401 bits (1032), Expect = e-139
 Identities = 130/300 (43%), Positives = 179/300 (59%), Gaps = 9/300 (3%)

Query: 67  SSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLA 126
           S  P     +  L+    K A Q P +P    L  +   LE  PP+    E   L+E+LA
Sbjct: 14  SLPPLPTDLRTRLDAALAKPAAQQPTWPADQALA-MRTVLESVPPVTVPSEIVRLQEQLA 72

Query: 127 EAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFA 186
           + A G AFLLQGGDCAE+F +    +IR   R LLQM VVL +G  MP++KV R+AGQ+A
Sbjct: 73  QVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYA 132

Query: 187 KPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATG 246
           KPRS      + + L SY+GD ING A D  +R  DP RL+RAY  ++A +NL+R+  + 
Sbjct: 133 KPRSADI---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSS 189

Query: 247 GYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSH 306
           G A++  V  WN +F   S  G RY+ LA  +D  L FM+A G  +    + + E + SH
Sbjct: 190 GLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACG--VADRNLQTAEIYASH 247

Query: 307 ECLLLPYEQALTR---RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKV 363
           E L+L YE+A+ R    D    Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K+
Sbjct: 248 EALVLDYERAMLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKL 307

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	373
d2b7oa1	462	Probable DAHP synthetase AroG, phenylalanine-repre	100.0

>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class-II DAHP synthetase
domain: Probable DAHP synthetase AroG, phenylalanine-repressible
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-133  Score=1003.20  Aligned_cols=290  Identities=44%  Similarity=0.748  Sum_probs=282.2

Q ss_pred             CCCcccccCccccCCCCCCHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhccChhhHHHH
Q 017323           77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDT  156 (373)
Q Consensus        77 Wsp~sWr~~pa~QqP~ypD~~~L~~V~~~L~~lPPLV~a~Ei~~Lr~~LA~vA~G~aFlLQGGDCAEsF~e~~~~~I~~k  156 (373)
                      |..++|+++||+|||.|||+.+| +|+++|+++|||||++||++||++||+||+|+|||||||||||+|+||++++|++|
T Consensus        24 ~~~~~~~~~Pa~QqP~ypd~~~l-~v~~~L~~~PPLV~a~Ei~~Lk~~La~va~G~AFlLQgGDCAEsF~~~~~~~Ir~k  102 (462)
T d2b7oa1          24 TRLDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGN  102 (462)
T ss_dssp             HHHHHHHTSCCTTCCCCCHHHHH-HHHHHHTSSCCSSCHHHHHHHHHHHHHHHTTSCEEEEEECSSCCSTTCSHHHHHHH
T ss_pred             hhhhhhhcCccccCCCCCCHHHH-HHHHHHhcCCCcCCHHHHHHHHHHHHHHhCCCEEEEECcccccChhhcChHHHHHH
Confidence            78899999999999999999998 59999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCeEeeeccccCCCCCCCCcccccCCeeccCccCcccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 017323          157 FRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAAT  236 (373)
Q Consensus       157 ~~~LlqMa~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~~dGv~LPsYRGD~VN~~~f~~~aR~PDP~RLl~AY~~SaaT  236 (373)
                      +++|+|||.||++++++|||||||||||||||||+++   ||++||||||||||+.+||+++|+|||+|||+||+||++|
T Consensus       103 ~k~llqMa~vL~~~~~~PVVkVGRiAGQyAKPRS~~~---dgv~LpsYRGDiVN~~~f~~~aR~PDP~Rll~aY~~Saat  179 (462)
T d2b7oa1         103 VRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAA  179 (462)
T ss_dssp             HHHHHHHHHHHHHHHTSCEEEEEECSSCCCCCCSCSB---CTTSSBCCCCTTTSCSSSSHHHHSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCCCEEEeccchhcccCCccCcc---cccccccccCCcccCCCCChhccCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999986   7999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCcccccccccchhhhhccCchhhHHHHHHHHHHHHHhHHHHhcCCCCCCCCCccceeecccccccccccc
Q 017323          237 LNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA  316 (373)
Q Consensus       237 Ln~lRa~~~gG~adl~~~~~W~~~f~~~s~~~~ry~~~~~~i~~al~Fm~a~G~~~~~~~~~~~~~~TSHEaLLL~YE~a  316 (373)
                      ||+||+|++||||||++++.||++|+++++.+++|++++++|+++|+||++||++..  .+++++||||||||||+||+|
T Consensus       180 LNllRa~~~gg~AdL~~v~~Wn~~f~~~s~~~~~y~~la~~I~~al~Fm~a~G~~~~--~l~~~~fyTSHEaLlL~YE~A  257 (462)
T d2b7oa1         180 MNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVADR--NLQTAEIYASHEALVLDYERA  257 (462)
T ss_dssp             HHHHHHHHTSTTSCHHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHHTTCCGG--GTCCCCEEEEEECCCHHHHHH
T ss_pred             HHHHHHhhccCccchhhhhhcccccccCCchhHHHHHHHHHHHHHhhhHhhcCCCcc--cccccccccchHhhccchhhh
Confidence            999999999999999999999999999999999999999999999999999999875  478999999999999999999


Q ss_pred             cccc---cCCCCCcccCCCCceeeccccCCCCchhHHHhhhccCcceeeeCCCCCcccc
Q 017323          317 LTRR---DSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVFAIWDLFVI  372 (373)
Q Consensus       317 LtR~---d~~~g~~Y~~SaH~lWIGeRTRqlDgAHVeflrgI~NPIGvKvGPs~tp~~~  372 (373)
                      |||.   |+.++.|||||||||||||||||+|||||||||||+|||||||||+|+||++
T Consensus       258 ltR~~~~d~~~~~~Y~~SaH~lWIGeRTRqlDgAHVef~rgI~NPIGiKvGP~~~pd~l  316 (462)
T d2b7oa1         258 MLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELA  316 (462)
T ss_dssp             TEEECCSSSSSCCEEETTCSEEEECTTTCCTTSHHHHHHHHCCSCEEEEECTTCCHHHH
T ss_pred             heecccccCCCCceeccccceeeecccccccccchhHHHHhccCcceeeeCCCCCHHHH
Confidence            9996   5556789999999999999999999999999999999999999999999985