Citrus Sinensis ID: 017332

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
MDISDAASTTTTKTVTEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV
cccccccccccccccccccHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEEEccccccccccccccEEEcEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccccEEEEEcccccccccccEEcccccccccccccccccccHHHHHHHHHHccccccccccccccc
ccHHHHcccccccccccccHHHHHHHcccccHcHHHHHHccccccccHEEccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEccccEcccccccHHHEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEccccccccEEEEEEEEcccccccccEcccHHHHcccccccccccccHHHHHHHHHHccccccccccccccc
mdisdaasttttktvteydrakevqafddtkagVKGLVDagvvniprifirppaeLAEELTThqsklqvpvidldgirynqlEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFytrertrnvrfnsnfdlyhsrtaswrdtlaistsgtkslepnewpkvCRDTIMEYIKEVSKLGETLFEILSMAlglkpeylkdmgcfnlYSVIChyyphcpqpeltlgarthsdpsFLTILLQDQigglqvfnenqwidvnpisgglvvNIGDFLQVVsndelksvdhRVVANVHATARVSVacfftghttetqkpfgpikeliskenppvyrefLVGEYFSKYFSKELESksaglkqfev
mdisdaasttttktvteydrakevqafddtkagvKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKkqfytrertrnvrfnsnfdlyhsrtaswrdtlaistsgtkslepnewpkvCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACfftghttetqkpfgpikeliskenPPVYREFLVGEYFSKYFSKELesksaglkqfev
MDISDAASttttktvtEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV
***********************VQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFS***************
*************************AFDDTKAGVKGLVDAGVVNIPRIFIRPP*************LQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQF***E*TRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV
**************VTEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKE*************
***************TEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELA*****HQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLK****
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MDISDAASTTTTKTVTEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query373 2.2.26 [Sep-21-2011]
Q84MB3365 1-aminocyclopropane-1-car yes no 0.943 0.964 0.494 1e-101
P93824360 1-aminocyclopropane-1-car no no 0.930 0.963 0.492 7e-99
Q8H1S4369 1-aminocyclopropane-1-car no no 0.938 0.948 0.481 1e-96
Q9LTH8364 1-aminocyclopropane-1-car no no 0.941 0.964 0.493 3e-96
Q9C5K7369 1-aminocyclopropane-1-car no no 0.957 0.967 0.478 3e-95
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.938 0.872 0.472 2e-94
Q9LTH7366 1-aminocyclopropane-1-car no no 0.943 0.961 0.476 5e-93
Q9M2C4370 1-aminocyclopropane-1-car no no 0.946 0.954 0.447 1e-90
Q9SKK4359 Probable 2-oxoacid depend no no 0.876 0.910 0.484 5e-90
Q9LSW7365 1-aminocyclopropane-1-car no no 0.957 0.978 0.441 6e-90
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function desciption
 Score =  368 bits (945), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/356 (49%), Positives = 242/356 (67%), Gaps = 4/356 (1%)

Query: 15  VTEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDL 74
           V   DR+  ++AFD+TK GVKGL+DAG+  IP IF  PPA L        S   +P IDL
Sbjct: 8   VAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDL 67

Query: 75  DGIRYNQL--EDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQF 132
            G   + +    +V+++  A++ WGFFQVINHG+P++++++MI+G+ +F+EQD EVKK F
Sbjct: 68  KGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGF 127

Query: 133 YTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVS 192
           Y+R+    + ++SNFDL+ S  A+WRDTL   T+      P + P  C + ++EY KEV 
Sbjct: 128 YSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPP-RPEDLPATCGEMMIEYSKEVM 186

Query: 193 KLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTI 252
           KLG+ LFE+LS ALGL   +LKDM C N   ++ HYYP CPQP+LTLG   HSD SFLTI
Sbjct: 187 KLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTI 246

Query: 253 LLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARV 312
           LLQD IGGLQV ++  W+DV P+ G LVVN+GD LQ+++ND+  SV+HRV+ANV A  R+
Sbjct: 247 LLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANV-AGPRI 305

Query: 313 SVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGL 368
           SVACFF+ +     + +GPIKE++S+ENPP YR+  + EY   Y SK  +  S  L
Sbjct: 306 SVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLL 361

Arabidopsis thaliana (taxid: 3702)
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2C4|ACCH8_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana GN=At3g61400 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
225433023363 PREDICTED: 1-aminocyclopropane-1-carboxy 0.959 0.986 0.536 1e-110
225433017365 PREDICTED: 1-aminocyclopropane-1-carboxy 0.914 0.934 0.539 1e-109
359477716 673 PREDICTED: 1-aminocyclopropane-1-carboxy 0.914 0.506 0.547 1e-108
225433009364 PREDICTED: 1-aminocyclopropane-1-carboxy 0.946 0.969 0.516 1e-107
296083607359 unnamed protein product [Vitis vinifera] 0.951 0.988 0.5 1e-106
356559859374 PREDICTED: LOW QUALITY PROTEIN: 1-aminoc 0.970 0.967 0.494 1e-105
356559863369 PREDICTED: 1-aminocyclopropane-1-carboxy 0.957 0.967 0.502 1e-105
359497517368 PREDICTED: 1-aminocyclopropane-1-carboxy 0.946 0.959 0.5 1e-105
147820925368 hypothetical protein VITISV_026363 [Viti 0.978 0.991 0.501 1e-104
225437842409 PREDICTED: 1-aminocyclopropane-1-carboxy 0.927 0.845 0.521 1e-104
>gi|225433023|ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/367 (53%), Positives = 262/367 (71%), Gaps = 9/367 (2%)

Query: 9   TTTTKTVTEYDRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQ 68
           T+TTK   +YDRA E++AFD++K GVKGLVDAGV  +PR+FIRPP    +      ++ +
Sbjct: 4   TSTTKFSEDYDRASELKAFDESKEGVKGLVDAGVSKVPRMFIRPP----DNSRDCNTQFK 59

Query: 69  VPVIDLDGIRYNQL--EDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDV 126
            PVIDL G+  + +  + IV+ VR AS+TWG F V+NHG+P+++++EM++GVH+F EQD 
Sbjct: 60  FPVIDLHGMDSDPIRRKKIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDN 119

Query: 127 EVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIME 186
           EVKK+FYTR+ TR V +NSNFDLY S+ A+WRDT          L P E P  CRD +ME
Sbjct: 120 EVKKEFYTRDLTRKVIYNSNFDLYVSKAANWRDTF-YCLMAPHPLNPQELPATCRDILME 178

Query: 187 YIKEVSKLGETLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSD 246
           Y ++V +LG  L E++S A+GL P +LKDM C    +++CHYYP CPQPELT+G   HSD
Sbjct: 179 YKEQVMRLGLKLLELMSEAIGLNPNHLKDMDCAEGLAILCHYYPACPQPELTMGTTKHSD 238

Query: 247 PSFLTILLQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANV 306
             FLTILLQDQIGGLQV +++QW+DV P  G LV+N+GD LQ+++ND  KSV+HRV+AN 
Sbjct: 239 NDFLTILLQDQIGGLQVLHQDQWVDVPPEPGALVINVGDLLQLITNDRFKSVEHRVLANR 298

Query: 307 HATARVSVACFFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSA 366
               RVSVACFF+     + K +GPIKEL+SKENPP YRE  V +Y   + SK L+  SA
Sbjct: 299 RG-PRVSVACFFSTSHLPSSKLYGPIKELLSKENPPKYRETTVRDYVLHFRSKGLDGTSA 357

Query: 367 GLKQFEV 373
            L QF++
Sbjct: 358 -LPQFKL 363

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225433017|ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] gi|147807864|emb|CAN66433.1| hypothetical protein VITISV_027452 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477716|ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433009|ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083607|emb|CBI23596.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356559859|ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356559863|ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Back     alignment and taxonomy information
>gi|359497517|ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147820925|emb|CAN65048.1| hypothetical protein VITISV_026363 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225437842|ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.943 0.964 0.492 1.9e-92
TAIR|locus:2018349360 AT1G04350 [Arabidopsis thalian 0.930 0.963 0.492 2.1e-91
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.946 0.969 0.491 6.5e-90
TAIR|locus:2009175369 AT1G06650 [Arabidopsis thalian 0.949 0.959 0.480 3.6e-89
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.946 0.975 0.476 6e-87
TAIR|locus:2009210369 AT1G06640 [Arabidopsis thalian 0.949 0.959 0.483 7.7e-87
TAIR|locus:2052781358 AT2G30830 [Arabidopsis thalian 0.941 0.980 0.467 2.6e-86
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.930 0.948 0.477 4.3e-86
TAIR|locus:2824199366 AT1G06645 [Arabidopsis thalian 0.935 0.953 0.467 3.4e-84
TAIR|locus:2040045359 AT2G25450 [Arabidopsis thalian 0.927 0.963 0.465 3.4e-84
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
 Identities = 176/357 (49%), Positives = 244/357 (68%)

Query:    19 DRAKEVQAFDDTKAGVKGLVDAGVVNIPRIFIRPPAELAEELTTHQSKLQVPVIDLDGIR 78
             DR+  ++AFD+TK GVKGL+DAG+  IP IF  PPA L        S   +P IDL G  
Sbjct:    12 DRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGG 71

Query:    79 YNQL--EDIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRE 136
              + +    +V+++  A++ WGFFQVINHG+P++++++MI+G+ +F+EQD EVKK FY+R+
Sbjct:    72 TDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRD 131

Query:   137 RTRNVRFNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTIMEYIKEVSKLGE 196
                 + ++SNFDL+ S  A+WRDTL   T+      P + P  C + ++EY KEV KLG+
Sbjct:   132 PASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPP-RPEDLPATCGEMMIEYSKEVMKLGK 190

Query:   197 TLFEILSMALGLKPEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQD 256
              LFE+LS ALGL   +LKDM C N   ++ HYYP CPQP+LTLG   HSD SFLTILLQD
Sbjct:   191 LLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQD 250

Query:   257 QIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVAC 316
              IGGLQV ++  W+DV P+ G LVVN+GD LQ+++ND+  SV+HRV+ANV A  R+SVAC
Sbjct:   251 HIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANV-AGPRISVAC 309

Query:   317 FFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV 373
             FF+ +     + +GPIKE++S+ENPP YR+  + EY   Y SK  +  S GL   ++
Sbjct:   310 FFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTS-GLLYLKI 365
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2018349 AT1G04350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824199 AT1G06645 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040045 AT2G25450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84MB3ACCH1_ARATHNo assigned EC number0.49430.94360.9643yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.921
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-73
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 9e-73
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-65
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-61
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 9e-60
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-59
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 8e-55
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-53
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-51
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-50
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-50
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 9e-47
PLN02904357 PLN02904, PLN02904, oxidoreductase 8e-45
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-43
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-42
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-38
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-36
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-34
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 9e-31
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 9e-30
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-29
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-25
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-24
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-21
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 9e-21
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-15
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 4e-04
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  230 bits (589), Expect = 3e-73
 Identities = 123/331 (37%), Positives = 181/331 (54%), Gaps = 29/331 (8%)

Query: 44  NIPRIFIRPPAE---LAEELTTHQSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQ 100
            +P  ++RP +E   L+E  T       VPVIDL      Q   +V Q+  A + +GFFQ
Sbjct: 14  TLPESYVRPESERPRLSEVSTCEN----VPVIDLGSPDRAQ---VVQQIGDACRRYGFFQ 66

Query: 101 VINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDT 160
           VINHGV   L+++M+   H+F    VE K + Y+ + T+ +R +++F++   +  +WRD 
Sbjct: 67  VINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDY 126

Query: 161 LAISTSGTKSLEPNEWPK---VCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMG 217
           L +         P EWP      ++ +  Y +EV +LG  L E +S +LGL+ +Y+K++ 
Sbjct: 127 LRLHCYPLDKYVP-EWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVL 185

Query: 218 CFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQ-IGGLQVFNENQWIDVNPIS 276
                 +  +YYP CP+PELT G   H+DP+ LTILLQDQ + GLQV  + +W+ VNP  
Sbjct: 186 GEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHP 245

Query: 277 GGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPF-----GP 331
           G  V+NIGD LQ +SN   KSV HR V N     R+SVA F          P       P
Sbjct: 246 GAFVINIGDQLQALSNGRYKSVWHRAVVNT-DKERMSVASFLC--------PCDDAVISP 296

Query: 332 IKELISKENPPVYREFLVGEYFSKYFSKELE 362
            K+L       VYR+F   EY+ K++S+ L+
Sbjct: 297 AKKLTDDGTAAVYRDFTYAEYYKKFWSRNLD 327

Length = 337
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 373
PLN02947374 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02904357 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.43
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.13
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.12
TIGR02466201 conserved hypothetical protein. This family consis 90.89
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 88.91
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 85.44
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 80.74
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-84  Score=636.77  Aligned_cols=335  Identities=33%  Similarity=0.560  Sum_probs=294.7

Q ss_pred             ccHHHHHhCCCCCCCccccCCCCCcchhhc--cc--CCCCCcceeeCCCCCcCcHHHHHHHHHHHHhhcCeEEEecCCCC
Q 017332           32 AGVKGLVDAGVVNIPRIFIRPPAELAEELT--TH--QSKLQVPVIDLDGIRYNQLEDIVDQVRAASQTWGFFQVINHGVP  107 (373)
Q Consensus        32 ~~v~~l~~~~~~~vP~~yi~p~~~~~~~~~--~~--~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~  107 (373)
                      +|||.|+++++.+||++||+|++++|....  .+  ....+||||||+.+.+..+..++++|++||++||||||+||||+
T Consensus        26 ~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp  105 (374)
T PLN02947         26 KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVP  105 (374)
T ss_pred             cCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCC
Confidence            689999999999999999999999875211  01  24568999999988643577899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHhhhcCCCCceecccCCCCCCCCCCCccccccccccCCC----CCCCCCCccccHHH
Q 017332          108 LNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVRFNSNFDLYHSRTASWRDTLAISTSGTK----SLEPNEWPKVCRDT  183 (373)
Q Consensus       108 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~gy~~~~~~~~~~~~~~~d~~~~~~~~p~----~~~p~~~p~~fr~~  183 (373)
                      .++++++++.+++||+||.|+|+++.........||+.......+...+|+|.+.+.. .|.    ..||+. |+.||++
T Consensus       106 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~-~p~~~~~~~WP~~-~~~fr~~  183 (374)
T PLN02947        106 SEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVC-HPLSDVLPHWPSS-PADLRKV  183 (374)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeec-CCcccccccCccc-hHHHHHH
Confidence            9999999999999999999999998654434456787654444456679999988765 442    269875 6689999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCC---hhhhccccCCCceeeeeeccCCCCCCccCCCCCCccCCCceEEEecCCCCC
Q 017332          184 IMEYIKEVSKLGETLFEILSMALGLK---PEYLKDMGCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQIGG  260 (373)
Q Consensus       184 ~~~y~~~~~~la~~ll~~la~~Lgl~---~~~~~~~~~~~~~~~~~~yYP~~p~~~~~~g~~~HtD~~~lTlL~qd~v~G  260 (373)
                      +++|+++|.+|+.+||++||++|||+   .++|.+........+|+|||||||+|+.++|+++|||+|+||||+||+++|
T Consensus       184 ~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~G  263 (374)
T PLN02947        184 AATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG  263 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCC
Confidence            99999999999999999999999997   446655544556789999999999999999999999999999999999999


Q ss_pred             cceecCCcEEEecCCCCeEEEEeCchhhhhcCCeecccceeeccCCCCCCeeEEEEeeccCCCCCCeeeecCccccCCCC
Q 017332          261 LQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKELISKEN  340 (373)
Q Consensus       261 LQV~~~g~W~~V~p~~g~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~~R~Si~~F~~P~~d~~d~~i~Pl~~lv~~~~  340 (373)
                      |||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++ +.++||||+||++|+.   |++|+|+++|+++++
T Consensus       264 LQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~-~~~~R~Sia~F~~P~~---d~~i~Pl~~lv~~~~  339 (374)
T PLN02947        264 LQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVN-STKPRISVASLHSLPF---ERVVGPAPELVDEQN  339 (374)
T ss_pred             eeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccC-CCCCEEEEEEEecCCC---CCEEeCChHhcCCCC
Confidence            999999999999999999999999999999999999999999988 7789999999999998   899999999999999


Q ss_pred             CCCCCCccHHHHHHHHHhccCCCcccccccccC
Q 017332          341 PPVYREFLVGEYFSKYFSKELESKSAGLKQFEV  373 (373)
Q Consensus       341 p~~y~~~~~~dy~~~~~~~~~~~~~~~~~~~~~  373 (373)
                      |++|++++++||++.++++...+++. |+.|++
T Consensus       340 p~~Y~~~~~~ey~~~~~~~~~~~~~~-l~~~~~  371 (374)
T PLN02947        340 PRRYMDTDFATFLAYLASAEGKHKNF-LESRKL  371 (374)
T ss_pred             CCcCCCCCHHHHHHHHHHhccCchhh-hhhhhc
Confidence            99999999999999999999999887 777764

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-40
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-40
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-39
1w9y_A319 The Structure Of Acc Oxidase Length = 319 5e-32
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 9e-12
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-10
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-10
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-07
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 185/355 (52%), Gaps = 26/355 (7%)
Query: 34  VKGLVDAGVVNIPRIFIRPPAELAE--ELTTHQSK---LQVPVIDLDGIRYNQ---LEDI 85
           V+ L  +G+++IP+ +IRP  EL    ++   + K    QVP IDL  I  +     E+ 
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 86  VDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVR-FN 144
           +++++ AS  WG   +INHG+P +L++ + +   +F    VE K+++   + T  ++ + 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 145 SNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPKVCRDTI---MEYIKEVSKLGETLFEI 201
           S      S    W D         +  + + WPK   D I    EY K +  L   +F+ 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186
Query: 202 LSMALGLKPEYL-KDMGCFN--LYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQI 258
           LS+ LGL+P+ L K++G     L  +  +YYP CPQPEL LG   H+D S LT +L + +
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246
Query: 259 GGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFF 318
            GLQ+F E +W+    +   +V++IGD L+++SN + KS+ HR + N     R+S A F 
Sbjct: 247 PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFC 305
Query: 319 TGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLKQFEV 373
                + +    P+ E++S E+P         ++  + F++ +E K  G +Q E+
Sbjct: 306 --EPPKDKIVLKPLPEMVSVESP--------AKFPPRTFAQHIEHKLFGKEQEEL 350
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-141
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-125
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-80
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-79
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-69
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-66
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  403 bits (1037), Expect = e-141
 Identities = 99/351 (28%), Positives = 172/351 (49%), Gaps = 18/351 (5%)

Query: 34  VKGLVDAGVVNIPRIFIRPPAEL-----AEELTTHQSKLQVPVIDLDGIR---YNQLEDI 85
           V+ L  +G+++IP+ +IRP  EL            +   QVP IDL  I        E+ 
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 86  VDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVR-FN 144
           +++++ AS  WG   +INHG+P +L++ + +   +F    VE K+++   + T  ++ + 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 145 SNFDLYHSRTASWRDTLAISTSGTKSLEPNEWPK---VCRDTIMEYIKEVSKLGETLFEI 201
           S      S    W D         +  + + WPK      +   EY K +  L   +F+ 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 202 LSMALGLKPEYLKD-MGCFN--LYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQDQI 258
           LS+ LGL+P+ L+  +G     L  +  +YYP CPQPEL LG   H+D S LT +L + +
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246

Query: 259 GGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFF 318
            GLQ+F E +W+    +   +V++IGD L+++SN + KS+ HR + N     R+S A F 
Sbjct: 247 PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFC 305

Query: 319 TGHTTETQKPFGPIKELISKENPPVYREFLVGEYFSKYFSKELESKSAGLK 369
                + +    P+ E++S E+P  +      ++       + + +    K
Sbjct: 306 E--PPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.72
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.89
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.12
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 87.61
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 87.61
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-83  Score=626.96  Aligned_cols=330  Identities=29%  Similarity=0.518  Sum_probs=292.1

Q ss_pred             cccHHHHHhCCCCCCCccccCCCCCcchhhcc--cC---CCCCcceeeCCCCCcC---cHHHHHHHHHHHHhhcCeEEEe
Q 017332           31 KAGVKGLVDAGVVNIPRIFIRPPAELAEELTT--HQ---SKLQVPVIDLDGIRYN---QLEDIVDQVRAASQTWGFFQVI  102 (373)
Q Consensus        31 ~~~v~~l~~~~~~~vP~~yi~p~~~~~~~~~~--~~---~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~l~  102 (373)
                      .++||+|+++++.+||++|++|+++++.....  ..   ...+||||||+.+.++   .+.+++++|++||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            46899999999999999999998877652110  00   1246999999998643   3677999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHhcCCHHHHHHhhhcCC-CCceecccCCCCCCCCCCCccccccccccCCC-----CCCCCCC
Q 017332          103 NHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRER-TRNVRFNSNFDLYHSRTASWRDTLAISTSGTK-----SLEPNEW  176 (373)
Q Consensus       103 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~~gy~~~~~~~~~~~~~~~d~~~~~~~~p~-----~~~p~~~  176 (373)
                      ||||+.++++++++++++||+||.|+|+++..... ....||+........+..||+|.|.+.. .|.     ..||+. 
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~-~p~~~~~~~~wP~~-  161 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLA-YPEEKRDLSIWPKT-  161 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEE-ESGGGCCGGGSCCS-
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeec-CCccccccccCCCc-
Confidence            99999999999999999999999999999876544 4578998766555566789999999876 332     269986 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhccccC---CCceeeeeeccCCCCCCccCCCCCCccCCCceEEE
Q 017332          177 PKVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGC---FNLYSVICHYYPHCPQPELTLGARTHSDPSFLTIL  253 (373)
Q Consensus       177 p~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~~~~~yYP~~p~~~~~~g~~~HtD~~~lTlL  253 (373)
                      ++.||+.+++|+++|.+|+.+||++|+++|||++++|.+.+.   .....+|+||||||++++..+|+++|||+|+||||
T Consensus       162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            557999999999999999999999999999999999998765   35677999999999999999999999999999999


Q ss_pred             ecCCCCCcceecCCcEEEecCCCCeEEEEeCchhhhhcCCeecccceeeccCCCCCCeeEEEEeeccCCCCCCe-eeecC
Q 017332          254 LQDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQK-PFGPI  332 (373)
Q Consensus       254 ~qd~v~GLQV~~~g~W~~V~p~~g~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~~R~Si~~F~~P~~d~~d~-~i~Pl  332 (373)
                      +||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++ ..++||||+||++|+.   |+ +|+|+
T Consensus       242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~~R~Sia~F~~P~~---d~~~i~pl  317 (356)
T 1gp6_A          242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFCEPPK---DKIVLKPL  317 (356)
T ss_dssp             EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCC-SSCCEEEEEEEEECCT---TTCEECCC
T ss_pred             EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCC-CCCCEEEEEEeecCCC---CCcEEeCC
Confidence            9999999999999999999999999999999999999999999999999998 7789999999999998   78 99999


Q ss_pred             ccccCCCCCCCCCCccHHHHHHHHHhccCCCccc
Q 017332          333 KELISKENPPVYREFLVGEYFSKYFSKELESKSA  366 (373)
Q Consensus       333 ~~lv~~~~p~~y~~~~~~dy~~~~~~~~~~~~~~  366 (373)
                      ++|+++++|++|+++|++||+..+++++++|+..
T Consensus       318 ~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          318 PEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             GGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             hhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            9999999999999999999999999888777643
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 373
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-69
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-57
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 5e-37
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  219 bits (557), Expect = 3e-69
 Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 19/348 (5%)

Query: 32  AGVKGLVDAGVVNIPRIFIRPPAEL-----AEELTTHQSKLQVPVIDLDGIRYN---QLE 83
             V+ L  +G+++IP+ +IRP  EL            +   QVP IDL  I  +     E
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 63

Query: 84  DIVDQVRAASQTWGFFQVINHGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERTRNVR- 142
           + +++++ AS  WG   +INHG+P +L++ + +   +F    VE K+++   + T  ++ 
Sbjct: 64  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 123

Query: 143 FNSNFDLYHSRTASWRDTLAISTSGTKSLEPNEW---PKVCRDTIMEYIKEVSKLGETLF 199
           + S      S    W D         +  + + W   P    +   EY K +  L   +F
Sbjct: 124 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVF 183

Query: 200 EILSMALGLKPEYLKDM---GCFNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILLQD 256
           + LS+ LGL+P+ L+         L  +  +YYP CPQPEL LG   H+D S LT +L +
Sbjct: 184 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 243

Query: 257 QIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVAC 316
            + GLQ+F E +W+    +   +V++IGD L+++SN + KS+ HR + N     R+S A 
Sbjct: 244 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAV 302

Query: 317 FFTGHTTETQKPFGPIKELISKENPPVYREFLVGEYF-SKYFSKELES 363
           F      + +    P+ E++S E+P  +      ++   K F KE E 
Sbjct: 303 FC--EPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 86.36
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-78  Score=588.51  Aligned_cols=322  Identities=30%  Similarity=0.534  Sum_probs=276.6

Q ss_pred             ccHHHHHhCCCCCCCccccCCCCCcchhh-----cccCCCCCcceeeCCCCCcC---cHHHHHHHHHHHHhhcCeEEEec
Q 017332           32 AGVKGLVDAGVVNIPRIFIRPPAELAEEL-----TTHQSKLQVPVIDLDGIRYN---QLEDIVDQVRAASQTWGFFQVIN  103 (373)
Q Consensus        32 ~~v~~l~~~~~~~vP~~yi~p~~~~~~~~-----~~~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~l~n  103 (373)
                      ..||+||++|+.+||++||||++++|..+     ..+....+||||||+.+.++   .+++++++|++||++||||||+|
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            47999999999999999999999998742     22355678999999999754   46789999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcCCHHHHHHhhhcCCC-CceecccCCCCCCCCCCCccccccccc-----cCCCCCCCCCCc
Q 017332          104 HGVPLNLIQEMIEGVHKFNEQDVEVKKQFYTRERT-RNVRFNSNFDLYHSRTASWRDTLAIST-----SGTKSLEPNEWP  177 (373)
Q Consensus       104 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~-~~~gy~~~~~~~~~~~~~~~d~~~~~~-----~~p~~~~p~~~p  177 (373)
                      |||+.++++++++++++||+||.|+|++|...... ...+|+...........+|.+.+....     ..+ ..||+. +
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~wp~~-~  161 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDL-SIWPKT-P  161 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCG-GGSCCS-S
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccc-cccccc-c
Confidence            99999999999999999999999999998654332 233455444334445566666543322     012 278876 4


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhccccC---CCceeeeeeccCCCCCCccCCCCCCccCCCceEEEe
Q 017332          178 KVCRDTIMEYIKEVSKLGETLFEILSMALGLKPEYLKDMGC---FNLYSVICHYYPHCPQPELTLGARTHSDPSFLTILL  254 (373)
Q Consensus       178 ~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~~~~~yYP~~p~~~~~~g~~~HtD~~~lTlL~  254 (373)
                      +.|++.+++|+++|.+|+.+|+++++++||+++++|.+...   .....+|++|||+++.++..+|+++|||+|+||||+
T Consensus       162 ~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~  241 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  241 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEe
Confidence            56999999999999999999999999999999999886542   234578999999999999999999999999999999


Q ss_pred             cCCCCCcceecCCcEEEecCCCCeEEEEeCchhhhhcCCeecccceeeccCCCCCCeeEEEEeeccCCCCCCeeeecCcc
Q 017332          255 QDQIGGLQVFNENQWIDVNPISGGLVVNIGDFLQVVSNDELKSVDHRVVANVHATARVSVACFFTGHTTETQKPFGPIKE  334 (373)
Q Consensus       255 qd~v~GLQV~~~g~W~~V~p~~g~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~~R~Si~~F~~P~~d~~d~~i~Pl~~  334 (373)
                      |+.++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+ ++++||||+||++|+.|  ..+++|+++
T Consensus       242 q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~-~~~~R~Si~~F~~p~~d--~~i~~pl~~  318 (349)
T d1gp6a_         242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFCEPPKD--KIVLKPLPE  318 (349)
T ss_dssp             ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCC-SSCCEEEEEEEEECCTT--TCEECCCGG
T ss_pred             ccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCC-CCCCeEEEEEEecCCCc--ceeecCCHH
Confidence            999999999999999999999999999999999999999999999999998 77899999999999983  245699999


Q ss_pred             ccCCCCCCCCCCccHHHHHHHHHh
Q 017332          335 LISKENPPVYREFLVGEYFSKYFS  358 (373)
Q Consensus       335 lv~~~~p~~y~~~~~~dy~~~~~~  358 (373)
                      ||++++|++|+++|++||++.++.
T Consensus       319 ~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         319 MVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCccHHHHHHHHHh
Confidence            999999999999999999999874
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure