Citrus Sinensis ID: 017363
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FKR0 | 361 | Probable S-adenosylmethio | yes | no | 0.943 | 0.975 | 0.457 | 3e-85 | |
| Q9FKC8 | 362 | Probable S-adenosylmethio | no | no | 0.949 | 0.977 | 0.458 | 1e-84 | |
| Q9LS10 | 359 | Probable S-adenosylmethio | no | no | 0.932 | 0.969 | 0.434 | 6e-81 | |
| Q9FKD0 | 362 | Probable S-adenosylmethio | no | no | 0.954 | 0.983 | 0.426 | 6e-80 | |
| Q68CM3 | 365 | Probable caffeine synthas | N/A | no | 0.860 | 0.879 | 0.352 | 9e-52 | |
| Q9FZN8 | 369 | Caffeine synthase 1 OS=Ca | N/A | no | 0.836 | 0.845 | 0.355 | 3e-51 | |
| Q0J998 | 404 | Indole-3-acetate O-methyl | yes | no | 0.860 | 0.794 | 0.325 | 2e-45 | |
| Q9FYZ9 | 364 | Benzoate carboxyl methylt | N/A | no | 0.847 | 0.868 | 0.318 | 2e-44 | |
| Q9AVK0 | 372 | 7-methylxanthosine syntha | N/A | no | 0.876 | 0.879 | 0.321 | 9e-44 | |
| Q9SPV4 | 359 | Salicylate O-methyltransf | N/A | no | 0.828 | 0.860 | 0.341 | 1e-43 |
| >sp|Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 315 bits (807), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 232/361 (64%), Gaps = 9/361 (2%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
S+PM GGD +SY NSS+Q+ ID +E + I + LDL L + TF +ADFGC
Sbjct: 7 SYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDL--LNMNPNLSTFTIADFGC 64
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S+GPNTF AVQNII+ V+ K+ + Q++ + + LEFQV+FND NDFNTLF+T PPS
Sbjct: 65 SIGPNTFHAVQNIIDIVKLKHLKESQED--SRVAPLEFQVYFNDLPNNDFNTLFRTQPPS 122
Query: 132 RK--YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSG 189
K YF+ GVPGSF+GR+ P++S+H N+S + +WLSK+ +E+ D S AWNK I C+
Sbjct: 123 SKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNN 182
Query: 190 LVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLG 249
L++ V+EAY QF+ D FL ARA ELVPGGL++ + LP+GV M ++ G + +G
Sbjct: 183 LIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKDTIG 242
Query: 250 SCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKP 309
CL DM T G+ EEK++ FN+P+YFP ELK IE+N F IE M+ + PL ++
Sbjct: 243 DCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMME-IVSHPLEAVQL 301
Query: 310 SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLK 369
S +TS RA+ V++ HFG +VD++F F K +E+ I E K + ++LK
Sbjct: 302 SNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSEHPIDFEKCKKQ--MVYHIVLK 359
Query: 370 R 370
R
Sbjct: 360 R 360
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9FKC8|MT799_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/364 (45%), Positives = 233/364 (64%), Gaps = 10/364 (2%)
Query: 10 PGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADF 69
P SFPM GGDG +SY NSS+Q++ ID AKE SE+I LDL+ L + ++ADF
Sbjct: 5 PQSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADF 64
Query: 70 GCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP 129
GCS+GPNTF VQNII+ V+ K + ++N+ + LEFQV FND NDFNTLF+T P
Sbjct: 65 GCSIGPNTFEVVQNIIDTVKQK---NLKENNAYIGAPLEFQVCFNDQPNNDFNTLFRTQP 121
Query: 130 PSRK--YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIIC 187
S K Y + GVPGSFHGR+ PK+SLH + + +L+WLS + + + D +SPA NK I C
Sbjct: 122 ISSKQAYLSVGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQC 181
Query: 188 SGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGF 247
+ LV+ V+EAY QFK D FL ARA ELV GGL++ LP+GVP + G +
Sbjct: 182 NNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILSGQCLPDGVPKALTWQGVVIDM 241
Query: 248 LGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRL 307
+G CL+DM +G+ +EK++ F++P+Y P E KA IERN F IE M+K+ P M
Sbjct: 242 IGDCLMDMAKQGITTKEKIELFSLPIYIPHISEFKAEIERNENFSIETMEKISHP--MDY 299
Query: 308 KP-SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFV 366
KP + + +TS RA+ +++EHFG +V+++F+ F K + I + K + VN F+
Sbjct: 300 KPLTNDFITSMFRAILNTIIEEHFGDGVVNELFDRFAKKLNKYPIDFKRCKKY--VNYFI 357
Query: 367 LLKR 370
+LKR
Sbjct: 358 VLKR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LS10|MT810_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (770), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 229/361 (63%), Gaps = 13/361 (3%)
Query: 13 FPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCS 72
+PM G +SY NSS+Q+ I +A E IF+KLDL+ GTF++ADFGCS
Sbjct: 8 YPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQ---LSSDFGTFRIADFGCS 64
Query: 73 VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--P 130
+GPNTF Q+II+ V++K +++ +NS LEFQVFFND NDFNTLF+T P P
Sbjct: 65 IGPNTFHVAQSIIDTVKSKRL---EESTENSLVPLEFQVFFNDQPTNDFNTLFRTQPLSP 121
Query: 131 SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGL 190
R+YF+ GVPGSF+GR+ P++S+H ++S + +WLSK+ + D +S AWNK I C+ L
Sbjct: 122 EREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNL 181
Query: 191 VKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGS 250
++ V++AY QF D E FL+ARA ELVPGGL++ + LP+GV + ++ G + +G
Sbjct: 182 LEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGECLPDGVSLYETWQGYVMDTIGD 241
Query: 251 CLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKP- 309
CL+DM G+ EEK+D F++P+YFP ELK IE+NG F IE M+ P + KP
Sbjct: 242 CLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHP--LEGKPL 299
Query: 310 SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLK 369
+ + +TS RA ++++HFG +VD++F K + + I E+ K V ++LK
Sbjct: 300 TNDFITSTFRAFLTTIIEKHFGDGVVDELFYRLAKKLSNHPIDFEMRK--KQVVYCIVLK 357
Query: 370 R 370
R
Sbjct: 358 R 358
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FKD0|MT797_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 228/366 (62%), Gaps = 10/366 (2%)
Query: 8 VLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLA 67
P SFPM GGDG +SY NSS+Q++ ID KE SE+I +KLDL+ L + ++
Sbjct: 3 TFPQSFPMNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIV 62
Query: 68 DFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT 127
DFGCS+GPNTF VQNII+ V+ K ++N + LEFQV FND NDFNTLF+T
Sbjct: 63 DFGCSIGPNTFDVVQNIIDTVKQKRL---KENKTYIGAPLEFQVCFNDQPNNDFNTLFRT 119
Query: 128 MP--PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSI 185
P ++YF+ GVPGSFHGR+ PK+SLH ++S +L+WLS + + + D +SPA NK I
Sbjct: 120 QPFFSRKEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYI 179
Query: 186 ICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLY 245
C+ LV V++AY QF+ D FL ARA ELV GGL++ LP+G+P + G +
Sbjct: 180 QCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILSGQCLPDGIPKALTWQGVVI 239
Query: 246 GFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLM 305
+G CL+D+ G+ +EK++ F++P Y P E KA IE+N F +E M+++ P M
Sbjct: 240 DMIGDCLMDLAKLGITSKEKIELFSLPTYIPHISEFKANIEQNENFNVETMEEISHP--M 297
Query: 306 RLKP-SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNL 364
P + + +TS RA+ +++EHFG +V+++F+ + + I + K + VN
Sbjct: 298 DYMPLTNDFITSMFRAILNTIIEEHFGEGVVNELFSRLAKRLDKYPIDFKRCKKY--VNY 355
Query: 365 FVLLKR 370
F++LKR
Sbjct: 356 FIVLKR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 184/352 (52%), Gaps = 31/352 (8%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMIS---ESIFDKLDLKSLGFDDTCGTFKLADFGC 71
M G+G+ SYA+NSSF + + ++ E++F K D L D GC
Sbjct: 10 MNKGEGESSYAQNSSFTQTVTSMTMPVLENAVETLFSK-DFHLLQ------ALNAVDLGC 62
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP- 130
+ GP TF + I ++ K R + + LE QV+ ND GNDFNTLF+ +P
Sbjct: 63 AAGPTTFTVISTIKRMMEKKCR-------ELNCQTLELQVYLNDLPGNDFNTLFKGLPSK 115
Query: 131 -------SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKG 183
+ GVPGSFHGRLFP++SLH +S S++WL++ K + A NKG
Sbjct: 116 VVGNKCEEVSCYVVGVPGSFHGRLFPRNSLHLVHSCYSVHWLTQAPKGLTSKEGLALNKG 175
Query: 184 SIICSGLVKGV-SEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGG 242
I S V EAY +QF D FLN+R+ E+VP G +V +L + P D
Sbjct: 176 KIYISKTSPPVVREAYLSQFHEDFTMFLNSRSQEVVPNGCMVLILRGRLSSDPS-DMGSC 234
Query: 243 KLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP-D 301
+ L + ++ ++GLIDE+K+D+FN+P YFP+ EE+K I+ERNG F I+ M+ D
Sbjct: 235 FTWELLAVAIAELVSQGLIDEDKLDTFNVPSYFPSLEEVKDIVERNGSFTIDHMEGFELD 294
Query: 302 PPLMRLKPS---PESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENF 350
P M+ E + RA E ++ FG++++DK++ FT +F
Sbjct: 295 SPEMQENDKWVRGEKFATVARAFTEPIISNQFGHEIMDKLYEKFTHIVVSDF 346
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May be involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 185/346 (53%), Gaps = 34/346 (9%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAK---EMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
M G+G+ SYA+NSSF + + A+ E E++F + D AD GC
Sbjct: 15 MNRGEGESSYAQNSSFTQQVASMAQPALENAVETLFSR--------DFHLQALNAADLGC 66
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
+ GPNTF + I ++ K R + + LE QV+ ND +GNDFNTLF+ +
Sbjct: 67 AAGPNTFAVISTIKRMMEKKCR-------ELNCQTLELQVYLNDLFGNDFNTLFKGLSSE 119
Query: 132 R--------KYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKG 183
+ GVPGSFHGRLFP++SLH +SS S++WL++ K + A NKG
Sbjct: 120 VIGNKCEEVPCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLALNKG 179
Query: 184 SIICSGLVKG-VSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGG 242
I S V EAY +QF D FLNAR+ E+VP G +V +L P D
Sbjct: 180 KIYISKTSPPVVREAYLSQFHEDFTMFLNARSQEVVPNGCMVLILRGRQCSDPS-DMQSC 238
Query: 243 KLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDP 302
+ L + ++ ++GLIDE+K+D+FNIP YF + EE+K I+ER+G F I+ ++ D
Sbjct: 239 FTWELLAMAIAELVSQGLIDEDKLDTFNIPSYFASLEEVKDIVERDGSFTIDHIEGF-DL 297
Query: 303 PLMRLKPSP-----ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFT 343
+ ++ + E T +RA E ++ FG +++DK+++ FT
Sbjct: 298 DSVEMQENDKWVRGEKFTKVVRAFTEPIISNQFGPEIMDKLYDKFT 343
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 3-N- and 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q0J998|IAMT1_ORYSJ Indole-3-acetate O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=IAMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 179/366 (48%), Gaps = 45/366 (12%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMIS--ESIFDKLDLKSLGFDDTCGTFKLADFGCS 72
M GG+GD SY NS Q + A+ M+ E D + +S + F AD GCS
Sbjct: 32 MKGGNGDGSYLNNSQAQAL---HARRMLHFLEETLDAMMERS----SSDKLFTAADLGCS 84
Query: 73 VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-- 130
G N+ V I+ V Y + +D A EFQVFF+D NDFNTLFQ +PP
Sbjct: 85 CGSNSLFIVDVIVRRVSEAYESRGRD-------APEFQVFFSDLPSNDFNTLFQLLPPLL 137
Query: 131 --------------------SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISK 170
+R Y A GVPG+F+GRLFP S+ S+ SL+WLS++ +
Sbjct: 138 APVAGSLEECLAAGEGAATATRPYHAAGVPGTFYGRLFPGESIDVFTSTFSLHWLSQVPE 197
Query: 171 EILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSL 230
E+ DS SPA+N G + + V+ AY QF+ D FL +RA E+ GG +
Sbjct: 198 EVGDSASPAYNGGRVFVHRATEAVAAAYKRQFQADLARFLRSRAREMKRGGAMFLACLGR 257
Query: 231 PNGVPMIDSNGGKLYG-FLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNG 289
+G P G L+G D+ +G+++ EK DSFNIP+Y P+ +E + ++ +G
Sbjct: 258 SSGDPADQGGAGLLFGTHFQDAWDDLVQEGVVEGEKRDSFNIPVYAPSLQEFRDVVRADG 317
Query: 290 CFRIERMDKLP-DPPLMRLKPSP-----ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFT 343
F I+R++ + PL+ +P ++ + +AV +V H G ++F
Sbjct: 318 AFAIDRLELVRGGSPLVVDRPDDAAEVGRAMANSCKAVAGVLVDAHIGERRGAQLFERLE 377
Query: 344 AKFAEN 349
+ A +
Sbjct: 378 RRAARH 383
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Catalyzes the methylation of the free carboxyl end of the plant hormone indole-3-acetic acid (IAA). Converts IAA to IAA methyl ester (MeIAA). Regulates IAA activities by IAA methylation. Methylation of IAA plays an important role in regulating plant development and auxin homeostasis. MeIAA seems to be an inactive form of IAA. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: n EC: 1 EC: 0 |
| >sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 184/355 (51%), Gaps = 39/355 (10%)
Query: 16 VGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGP 75
+ GDG+ SYA NS Q++++ + ++ E++ D + +GF FK+ D GCS GP
Sbjct: 12 IAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIG-DHVGFPKC---FKMMDMGCSSGP 67
Query: 76 NTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSR-KY 134
N + + II ++ Y +N + EF+VF ND NDFN LF+ +
Sbjct: 68 NALLVMSGIINTIEDLY------TEKNINELPEFEVFLNDLPDNDFNNLFKLLSHENGNC 121
Query: 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSI-ICSGLVKG 193
F +G+PGSF+GRL PK SLHFA SS S++WLS++ + + D+ N+ +I + +
Sbjct: 122 FVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDN-----NRQNIYMATESPPE 176
Query: 194 VSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGG---KLYGFLGS 250
V +AY+ Q++ D FL R E+VPGG +V NG + D + ++ L
Sbjct: 177 VYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTF----NGRSVEDPSSKDDLAIFTLLAK 232
Query: 251 CLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD------------- 297
L+DM +GL+ + + SFNIP+Y P E++A I G F ++R++
Sbjct: 233 TLVDMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYTD 292
Query: 298 --KLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENF 350
DP + + S + V +RA+ E ++ HFG ++D +F + K E+
Sbjct: 293 DDDQQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHL 347
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Converts benzoic acid into the volatile ester methyl benzoates. This scent, mostly produced in a rhythmical, diurnal manner, attracts the pollinators. Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 183/358 (51%), Gaps = 31/358 (8%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
M GG+GD SYAKNS++ ++++ K ++ + + +L + K+AD GC+ G
Sbjct: 9 MNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCV---RELLRANLPNINKCIKVADLGCASG 65
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---- 130
PNT + V++I++++ + +N Q+F ND + NDFN++F+ +P
Sbjct: 66 PNTLLTVRDIVQSIDKVGQ-----EKKNELERPTIQIFLNDLFPNDFNSVFKLLPSFYRK 120
Query: 131 -----SRKY---FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNK 182
RK +PGSF+ RLFP+ S+HF +S L WLS++ ++ + NK
Sbjct: 121 LEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGISTNK 180
Query: 183 GSIICSGLVK-GVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNG 241
GSI S + V +AY QF D FL + EL G ++ L + GV + N
Sbjct: 181 GSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRML--LTCICKGVELDARNA 238
Query: 242 GKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRI---ERMDK 298
L L + D+ +G ++EEK+DSFN+P+Y P+AEE+K I+E G F I E
Sbjct: 239 IDL---LEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKV 295
Query: 299 LPDP--PLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGE 354
L D + E V S +RAV+E ++ HFG ++ IF+ F A+ G+
Sbjct: 296 LYDAGFSIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAKVLPLGK 353
|
Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 180/343 (52%), Gaps = 34/343 (9%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGT-FKLADFGCSV 73
M GG G+ SYA NS QR +I K + +I +L DT T +AD GCS
Sbjct: 9 MKGGAGENSYAMNSFIQRQVISITKPITEAAI------TALYSGDTVTTRLAIADLGCSS 62
Query: 74 GPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRK 133
GPN AV +I+ V+ + ++N + E+Q+F ND GNDFN +F+++P
Sbjct: 63 GPNALFAVTELIKTVEELRKKMGREN------SPEYQIFLNDLPGNDFNAIFRSLPIEND 116
Query: 134 Y----FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSG 189
F GVPGSF+GRLFP+++LHF +SS SL WLS++ I NKG+I +
Sbjct: 117 VDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES------NKGNIYMAN 170
Query: 190 LV-KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFL 248
+ V AY QF+ D FL RA E+VPGG +V + + ++ L
Sbjct: 171 TCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG-RRSEDRASTECCLIWQLL 229
Query: 249 GSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD--KLPDPPLMR 306
L M ++GLI+EEK+D FNIP Y P+ E++A I + G F I+ ++ ++ +
Sbjct: 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTK 289
Query: 307 -------LKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFF 342
++ +V +RAV E ++ +HFG +++ +F+ +
Sbjct: 290 DGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRY 332
|
Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants. Clarkia breweri (taxid: 36903) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: n EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | ||||||
| 224069525 | 370 | predicted protein [Populus trichocarpa] | 0.986 | 0.994 | 0.546 | 1e-109 | |
| 224144825 | 351 | predicted protein [Populus trichocarpa] | 0.938 | 0.997 | 0.526 | 1e-101 | |
| 225424405 | 361 | PREDICTED: probable S-adenosylmethionine | 0.962 | 0.994 | 0.469 | 2e-91 | |
| 297737616 | 402 | unnamed protein product [Vitis vinifera] | 0.951 | 0.883 | 0.471 | 2e-91 | |
| 225466372 | 353 | PREDICTED: probable S-adenosylmethionine | 0.930 | 0.983 | 0.473 | 5e-91 | |
| 359472587 | 350 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.924 | 0.985 | 0.5 | 1e-90 | |
| 225424403 | 353 | PREDICTED: probable S-adenosylmethionine | 0.935 | 0.988 | 0.476 | 1e-89 | |
| 297737614 | 347 | unnamed protein product [Vitis vinifera] | 0.924 | 0.994 | 0.473 | 5e-89 | |
| 225424399 | 360 | PREDICTED: probable S-adenosylmethionine | 0.957 | 0.991 | 0.478 | 6e-89 | |
| 147833899 | 521 | hypothetical protein VITISV_030502 [Viti | 0.941 | 0.673 | 0.483 | 6e-89 |
| >gi|224069525|ref|XP_002302990.1| predicted protein [Populus trichocarpa] gi|222844716|gb|EEE82263.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/375 (54%), Positives = 265/375 (70%), Gaps = 7/375 (1%)
Query: 1 MVDEAANVLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDT 60
M E LP S+ MVGGDG SY +NS++Q+ ++DA+KE ++E I DKLD KSLGFD +
Sbjct: 1 MATEEIKELPKSWAMVGGDGPQSYTQNSAYQKGVVDASKEKVTEGIKDKLDFKSLGFDSS 60
Query: 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGND 120
TF++ADFGCSVGPNTF AV+NIIEAV+ KY+A Q ++ LEFQVFFND ND
Sbjct: 61 NDTFRIADFGCSVGPNTFFAVENIIEAVEQKYQAQFQ---KSPPLELEFQVFFNDVTTND 117
Query: 121 FNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAW 180
FNTLF+T+ +RKYFA G+PG+F+GRL PKS+LHFA SS L WLSK+ KE++DS+SPAW
Sbjct: 118 FNTLFKTLHSNRKYFAAGLPGTFYGRLLPKSTLHFAYSSYCLQWLSKVPKEVVDSKSPAW 177
Query: 181 NKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSN 240
NKGSI C GL K V++AYSAQF++D FLNARA E+V GGL+V ++ LP+G+ M +
Sbjct: 178 NKGSIQCDGLKKEVTKAYSAQFQSDMNTFLNARAQEIVGGGLMVIIMAGLPDGIFMSQAG 237
Query: 241 GGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300
G Y LGSCL+DM G I EEKVDSFN+PLY+ ++ E++ II+ NG F IE MD L
Sbjct: 238 VGMYYELLGSCLVDMAKLGEISEEKVDSFNLPLYYSSSTEIEEIIKENGNFNIEIMDSLS 297
Query: 301 DPPLMRLKPSPESVT-SQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENF-IFGELIKD 358
K S V+ S RAVF+G+V+EHFG ++V+K F F K +NF IF +
Sbjct: 298 HQIWKTSKKSNIEVSVSGGRAVFQGLVEEHFGSEVVEKTFEHFAKKLVDNFSIFDGAAHE 357
Query: 359 HNNVNLFVLLKRVIN 373
H ++ F+LLKR N
Sbjct: 358 H--IDHFILLKRHFN 370
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144825|ref|XP_002336178.1| predicted protein [Populus trichocarpa] gi|222875362|gb|EEF12493.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 255/357 (71%), Gaps = 7/357 (1%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDT-CGTFKLADFGCSV 73
MVGGDG SYA+NSS+QR + E+++E I DKL+ S D + TF++ADFGCS
Sbjct: 1 MVGGDGPRSYAQNSSYQRGGLVIVNELMNEGIKDKLEFISPCSDSSNICTFRIADFGCSA 60
Query: 74 GPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRK 133
GPNTF+A++ IIEAV+ KY A ++ S LEFQVFFND NDFNTLF+T+P +K
Sbjct: 61 GPNTFLAMEKIIEAVEQKYHAQFKN-----SPPLEFQVFFNDVTTNDFNTLFKTLPLYQK 115
Query: 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKG 193
YFA GVPG+F+GRLFPKS+L A SS SL+WLSK+ +E++D++SPAWNKGSI CSG K
Sbjct: 116 YFAAGVPGTFYGRLFPKSTLRLAYSSYSLHWLSKVPEEVVDTKSPAWNKGSIQCSGTAKE 175
Query: 194 VSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLI 253
V++AYSAQFK D + FLNARA E++ GGL+V ++ LP+G+ + + GK Y GSCLI
Sbjct: 176 VAKAYSAQFKTDMDNFLNARAQEIIGGGLMVIIILGLPDGILLSQTVAGKSYELFGSCLI 235
Query: 254 DMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPES 313
DM G+I EEKVD+FN+PLY+ +A+EL+ II+ +G F IER++ L + P+M+ K +S
Sbjct: 236 DMAKLGVISEEKVDTFNLPLYYSSAKELEEIIKNHGHFCIERLNML-NHPMMKRKIDVQS 294
Query: 314 VTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
SQ R++F+G+++ HFG D VDKI + K AEN+ + H +V F+LLKR
Sbjct: 295 HISQFRSIFQGLLEAHFGRDDVDKILEYHAKKLAENYDSVFNVAKHQHVEHFILLKR 351
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424405|ref|XP_002284898.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/371 (46%), Positives = 237/371 (63%), Gaps = 12/371 (3%)
Query: 1 MVDEAANVLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDT 60
M + A SFPM GGDG +SY NS QR DA + MI E+I KLD+K +
Sbjct: 1 MSNNRAATTQQSFPMKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCF----S 56
Query: 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSAL-EFQVFFNDHYGN 119
F+LAD GCSVGPNTFI++Q+I+EAV+ KY Q S + EFQVFFNDH N
Sbjct: 57 SNPFRLADLGCSVGPNTFISMQHIVEAVERKYL------EQGLKSQIPEFQVFFNDHVAN 110
Query: 120 DFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPA 179
DFNTLF ++P R+YFA GVPGSFHGRLFP+SS+HF SS +++WLSK+ +E+LD SPA
Sbjct: 111 DFNTLFASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPA 170
Query: 180 WNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDS 239
WN+G I + VS AY+AQF +D E FL+ARA ELV GG+IV + +LPNG+P
Sbjct: 171 WNRGRIHYTSAPDEVSHAYAAQFDHDMEIFLSARAKELVVGGIIVLTMAALPNGIPASRI 230
Query: 240 NGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299
G ++ LG+ L+DMT GLI+E +VDSFN+P+Y P+ E++ +++RNGCF IERM+ +
Sbjct: 231 PSGVMFDLLGASLMDMTKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELV 290
Query: 300 PDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDH 359
+ + + +RA EG++ +HFG ++D++F+ F+ K E F
Sbjct: 291 YRASKLVAPITGKECGMHLRAGMEGMIAKHFGSGIIDELFDTFSKKSVE-FSHQLESSTR 349
Query: 360 NNVNLFVLLKR 370
LF L+R
Sbjct: 350 EGAQLFAALRR 360
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737616|emb|CBI26817.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/365 (47%), Positives = 243/365 (66%), Gaps = 10/365 (2%)
Query: 6 ANVLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFK 65
A + SFPM GGDG +SY NS FQR ++ ++ MI E+I KLD+K + F+
Sbjct: 47 AATMQQSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF----SSNPFR 102
Query: 66 LADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF 125
LA+ GCSVGPNTFIA+Q+I+EAV+ +Y S EFQVFFNDH GNDFNTLF
Sbjct: 103 LANLGCSVGPNTFIAMQHIVEAVERRYLVQGLK-----SEMPEFQVFFNDHVGNDFNTLF 157
Query: 126 QTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSI 185
++P R+YFA GVPGSFHGRLFP+SS+HF SS +L+WLSK+ +E+LD SPAWN+G I
Sbjct: 158 ASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRI 217
Query: 186 ICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLY 245
+ + VS AY+AQF++D E FL+ARA ELV GG+IVF++ +LPNG+P + G ++
Sbjct: 218 HYTSGPEEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILALPNGIPASQNPYGIMF 277
Query: 246 GFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLM 305
LGSCL+DM +GLI E +VDSFN+P++ + E++ ++ERN C IERM+ + +
Sbjct: 278 DLLGSCLMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKL 337
Query: 306 RLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLF 365
+ + +RA EG+ +HFG ++D++F+ F+ K E+ E + + LF
Sbjct: 338 VGPINGKEYAMYLRAGLEGIFAQHFGSGIIDQLFDSFSKKIMESSHQLE-SGNKEGILLF 396
Query: 366 VLLKR 370
V+L+R
Sbjct: 397 VVLRR 401
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466372|ref|XP_002276659.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 242/361 (67%), Gaps = 14/361 (3%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SFPM GGDG +SY NS FQR ++ ++ MI E+I KLD+K + F+LA+ GC
Sbjct: 4 SFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF----SSNPFRLANLGC 59
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
SVGPNTFIA+Q+I+EAV+ +Y S EFQVFFNDH GNDFNTLF ++P
Sbjct: 60 SVGPNTFIAMQHIVEAVERRYLVQGLK-----SEMPEFQVFFNDHVGNDFNTLFASLPTE 114
Query: 132 RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLV 191
R+YFA GVPGSFHGRLFP+SS+HF SS +L+WLSK+ +E+LD SPAWN+G I +
Sbjct: 115 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 174
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
+ VS AY+AQF++D E FL+ARA ELV GG+IVF++ +LPNG+P + G ++ LGSC
Sbjct: 175 EEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILALPNGIPASQNPYGIMFDLLGSC 234
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSP 311
L+DM +GLI E +VDSFN+P++ + E++ ++ERN C IERM+ + + +
Sbjct: 235 LMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPING 294
Query: 312 ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNN--VNLFVLLK 369
+ +RA EG+ +HFG ++D++F+ F+ K E+ ++ N + LFV+L+
Sbjct: 295 KEYAMYLRAGLEGIFAQHFGSGIIDQLFDSFSKKIMES---SHQLESGNKEGILLFVVLR 351
Query: 370 R 370
R
Sbjct: 352 R 352
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472587|ref|XP_003631171.1| PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 235/360 (65%), Gaps = 15/360 (4%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SFPM GGDG YSYA NS FQR +A+K MI E+I +KLD+++L + TF LAD GC
Sbjct: 4 SFPMTGGDGSYSYANNSYFQRQCANASKSMIEEAIAEKLDVQAL----STKTFCLADLGC 59
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
SVGPNTF+A+Q+I+ AV+ +Y A +H EFQVFFNDH NDFNTLF ++P
Sbjct: 60 SVGPNTFVAMQHIVGAVERRYLALGLKSH-----ITEFQVFFNDHAANDFNTLFASLPTE 114
Query: 132 RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLV 191
R+YFA GVPGSFHGRLFP+SS+HF SS++L+WLS++ EILD SPAWNKG + +G
Sbjct: 115 RRYFACGVPGSFHGRLFPESSIHFMYSSNALHWLSRMPDEILDKNSPAWNKGRVHHTGAP 174
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
V+ AY+AQF D FLNARA ELV GG++V ++ +LP+G Y L SC
Sbjct: 175 YEVAHAYAAQFDKDMRNFLNARAKELVVGGIMVLIMSTLPDGTSPYRYPPRASYDILESC 234
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKP-S 310
L++ G+I E + DSFN PLY P+ E+L A++ERNGCF IERM+ L +P P S
Sbjct: 235 LME---TGIISEAQADSFNHPLYRPSLEQLTALVERNGCFSIERME-LTNPASKLDGPMS 290
Query: 311 PESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
+ T +RA EG+V +HF D VD++F+ F K EN + + FV+LKR
Sbjct: 291 GHAYTMHVRATIEGLVAKHFRSDSVDQLFHLFFKKI-ENMSRQLELDPKEEIQRFVVLKR 349
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424403|ref|XP_002281406.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] gi|297737615|emb|CBI26816.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 239/359 (66%), Gaps = 10/359 (2%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SFPM GGDG +SY NS FQR ++ ++ MI E+I KLD+K + F+LAD GC
Sbjct: 4 SFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF----SSNPFRLADLGC 59
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
SVGPNTFIA+Q+I+EAV+ +Y A S EFQVFFNDH GNDFNTLF ++P
Sbjct: 60 SVGPNTFIAMQHIVEAVERRYLAQGL-----KSEMPEFQVFFNDHVGNDFNTLFASLPTE 114
Query: 132 RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLV 191
R+YFA GVPGSFHGRLFP+SS+HF SS +L+WLSK+ +E+LD SPAWN+G I +
Sbjct: 115 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 174
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
+ VS AY+AQF++D E FL+ARA ELV GG+IV ++ +LPNG+P + G ++ LGS
Sbjct: 175 EEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVVLIPALPNGIPASQNPYGVMFDLLGSS 234
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSP 311
L+DM +GLI E +VDSFN+P++ + E++ ++ERN C IERM+ + + +
Sbjct: 235 LMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPING 294
Query: 312 ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
+ +RA EG+ +HFG ++D++F+ + K E+ E N+ LFV+L+R
Sbjct: 295 KECAMYLRAGLEGIFAQHFGSGIIDQLFDRLSKKIMESSHKLESGNKEGNL-LFVVLRR 352
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737614|emb|CBI26815.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/357 (47%), Positives = 231/357 (64%), Gaps = 12/357 (3%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
M GGDG +SY NS QR DA + MI E+I KLD+K + F+LAD GCSVG
Sbjct: 1 MKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCF----SSNPFRLADLGCSVG 56
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSAL-EFQVFFNDHYGNDFNTLFQTMPPSRK 133
PNTFI++Q+I+EAV+ KY Q S + EFQVFFNDH NDFNTLF ++P R+
Sbjct: 57 PNTFISMQHIVEAVERKYL------EQGLKSQIPEFQVFFNDHVANDFNTLFASLPTERR 110
Query: 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKG 193
YFA GVPGSFHGRLFP+SS+HF SS +++WLSK+ +E+LD SPAWN+G I +
Sbjct: 111 YFACGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPAWNRGRIHYTSAPDE 170
Query: 194 VSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLI 253
VS AY+AQF +D E FL+ARA ELV GG+IV + +LPNG+P G ++ LG+ L+
Sbjct: 171 VSHAYAAQFDHDMEIFLSARAKELVVGGIIVLTMAALPNGIPASRIPSGVMFDLLGASLM 230
Query: 254 DMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPES 313
DMT GLI+E +VDSFN+P+Y P+ E++ +++RNGCF IERM+ + + + +
Sbjct: 231 DMTKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELVYRASKLVAPITGKE 290
Query: 314 VTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
+RA EG++ +HFG ++D++F+ F+ K E F LF L+R
Sbjct: 291 CGMHLRAGMEGMIAKHFGSGIIDELFDTFSKKSVE-FSHQLESSTREGAQLFAALRR 346
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424399|ref|XP_002281366.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] gi|297737618|emb|CBI26819.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 178/372 (47%), Positives = 240/372 (64%), Gaps = 15/372 (4%)
Query: 1 MVDEAANVLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDT 60
M + + SFPM GGDG +SY NS QR +A++ I E+I KLD+K +
Sbjct: 1 MSNNNTATMQQSFPMNGGDGPHSYLNNSHLQRQATNASRITIEEAIAKKLDVKCF----S 56
Query: 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSAL-EFQVFFNDHYGN 119
F+LAD GCSVGPNTFIA+Q+I+EAV+ KY A Q S + EFQVFFNDH N
Sbjct: 57 SNPFRLADLGCSVGPNTFIAMQHIVEAVERKYLA------QGLKSEMPEFQVFFNDHVAN 110
Query: 120 DFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPA 179
DFNTLF ++P R+YFA GVPGSFHGRLFP+SS+HF SS +L+WLSK+ +E+LD SPA
Sbjct: 111 DFNTLFASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPA 170
Query: 180 WNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDS 239
WN+G I + + VS AY+AQF++D E FL+ARA ELV GG+IV ++ +LP G+P
Sbjct: 171 WNRGRIHYTSGPEEVSHAYAAQFEHDMEIFLSARAKELVFGGMIVLLIPALPTGIPTSHI 230
Query: 240 NGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299
G ++ LGS L+DM +GLI E +VDSFN+P+Y + E++ +++ERNG IERM+ L
Sbjct: 231 PIGIMFDLLGSSLMDMAKEGLISEAEVDSFNLPIYATSLEQMTSLVERNGYLIIERME-L 289
Query: 300 PDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDH 359
DP + S + T RA EG+ EHFG ++D++F+ K E +L H
Sbjct: 290 MDPTSKHVAVSGKDYTMNFRAGMEGIFGEHFGSGIIDEVFDRLYKKTVE--FSHQLESSH 347
Query: 360 NN-VNLFVLLKR 370
LFV+L+R
Sbjct: 348 KEGTQLFVVLRR 359
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147833899|emb|CAN73170.1| hypothetical protein VITISV_030502 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 236/362 (65%), Gaps = 11/362 (3%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
S+ M GDG YSYAK SS+Q+ I+DAAK+M+ E+I D LD+ + F + T ++AD GC
Sbjct: 142 SYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFGSS-NTLRIADMGC 200
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S+GPN FIAVQNI+EAV KY++ Q ALEF VFFNDH NDFN LF+++PPS
Sbjct: 201 SIGPNAFIAVQNIVEAVTLKYQS-----MQQKPQALEFHVFFNDHXANDFNALFRSLPPS 255
Query: 132 RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLV 191
R YFA GVPGSFHGRLFPKSSLH +SS +L+WLSK+ KE+++ G S
Sbjct: 256 RPYFAVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEJNFLGLKNGRNY-STTD 314
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
+ V E +S+Q+K D ++FL ARA ELV GGL+V ++ + NG + G ++ GSC
Sbjct: 315 EEVLEVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTGMQNGAIFSKTCSGMVFNLFGSC 374
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSP 311
L+DM GL+ EKV SF+ PLY+ T +EL+A+IE NG F IER++ L P L P
Sbjct: 375 LMDMANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEILARPLEHEL-PDY 433
Query: 312 ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAEN-FIFGELIKDHNNVNLFVLLKR 370
+ +RA EG+V+EHFG ++++ +F +T K EN FIF E + +LFV L+R
Sbjct: 434 RICSFHLRAAMEGLVEEHFGKEIIEDLFERYTNKLGENSFIFDEEYRKE--THLFVFLRR 491
Query: 371 VI 372
I
Sbjct: 492 KI 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | ||||||
| TAIR|locus:2166640 | 361 | AT5G38780 [Arabidopsis thalian | 0.943 | 0.975 | 0.434 | 1.6e-72 | |
| TAIR|locus:2144461 | 359 | AT5G38100 [Arabidopsis thalian | 0.932 | 0.969 | 0.423 | 1.8e-69 | |
| TAIR|locus:2082117 | 379 | AT3G44870 "AT3G44870" [Arabido | 0.914 | 0.899 | 0.415 | 6.5e-67 | |
| TAIR|locus:504956193 | 351 | AT1G15125 [Arabidopsis thalian | 0.924 | 0.982 | 0.402 | 5.8e-66 | |
| TAIR|locus:2082157 | 348 | AT3G44840 [Arabidopsis thalian | 0.922 | 0.988 | 0.418 | 4.1e-65 | |
| TAIR|locus:2082112 | 348 | FAMT "farnesoic acid carboxyl- | 0.922 | 0.988 | 0.409 | 4.1e-65 | |
| TAIR|locus:2200186 | 363 | AT1G68040 [Arabidopsis thalian | 0.882 | 0.906 | 0.409 | 1.1e-62 | |
| TAIR|locus:2033409 | 353 | PXMT1 [Arabidopsis thaliana (t | 0.868 | 0.917 | 0.398 | 9e-61 | |
| TAIR|locus:2033414 | 353 | AT1G66690 "AT1G66690" [Arabido | 0.922 | 0.974 | 0.379 | 5e-60 | |
| TAIR|locus:2033389 | 352 | AT1G66720 [Arabidopsis thalian | 0.871 | 0.923 | 0.389 | 2.2e-57 |
| TAIR|locus:2166640 AT5G38780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 157/361 (43%), Positives = 217/361 (60%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
S+PM GGD +SY NSS+Q+ ID +E + I + LDL L + TF +ADFGC
Sbjct: 7 SYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDL--LNMNPNLSTFTIADFGC 64
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S+GPNTF AVQNII+ V+ K+ + Q++ + + LEFQV+FND NDFNTLF+T PPS
Sbjct: 65 SIGPNTFHAVQNIIDIVKLKHLKESQEDSR--VAPLEFQVYFNDLPNNDFNTLFRTQPPS 122
Query: 132 RK--YFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSG 189
K YF+ GVPGSF+GR+ P+ E+ D S AWNK I C+
Sbjct: 123 SKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNN 182
Query: 190 LVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLG 249
L++ V+EAY QF+ D FL ARA ELVPGGL++ + LP+GV M ++ G + +G
Sbjct: 183 LIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKDTIG 242
Query: 250 SCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKP 309
CL DM T G+ EEK++ FN+P+YFP ELK IE+N F IE M+ + PL ++
Sbjct: 243 DCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMME-IVSHPLEAVQL 301
Query: 310 SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLK 369
S +TS RA+ V++ HFG +VD++F F K +E+ I E K + ++LK
Sbjct: 302 SNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSEHPIDFEKCK--KQMVYHIVLK 359
Query: 370 R 370
R
Sbjct: 360 R 360
|
|
| TAIR|locus:2144461 AT5G38100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 153/361 (42%), Positives = 218/361 (60%)
Query: 13 FPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCS 72
+PM G +SY NSS+Q+ I +A E IF+KLDL+ L D GTF++ADFGCS
Sbjct: 8 YPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQ-LSSD--FGTFRIADFGCS 64
Query: 73 VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--P 130
+GPNTF Q+II+ V++K R + ++ +NS LEFQVFFND NDFNTLF+T P P
Sbjct: 65 IGPNTFHVAQSIIDTVKSK-RLE--ESTENSLVPLEFQVFFNDQPTNDFNTLFRTQPLSP 121
Query: 131 SRKYFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGL 190
R+YF+ GVPGSF+GR+ P+ + D +S AWNK I C+ L
Sbjct: 122 EREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNL 181
Query: 191 VKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGS 250
++ V++AY QF D E FL+ARA ELVPGGL++ + LP+GV + ++ G + +G
Sbjct: 182 LEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGECLPDGVSLYETWQGYVMDTIGD 241
Query: 251 CLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKP- 309
CL+DM G+ EEK+D F++P+YFP ELK IE+NG F IE M+ P + KP
Sbjct: 242 CLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHP--LEGKPL 299
Query: 310 SPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLK 369
+ + +TS RA ++++HFG +VD++F K + + I E+ K V ++LK
Sbjct: 300 TNDFITSTFRAFLTTIIEKHFGDGVVDELFYRLAKKLSNHPIDFEMRK--KQVVYCIVLK 357
Query: 370 R 370
R
Sbjct: 358 R 358
|
|
| TAIR|locus:2082117 AT3G44870 "AT3G44870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 149/359 (41%), Positives = 207/359 (57%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SF M+GG+G SY +S +Q +++AAKE I+E+I KLD+ D T +ADFGC
Sbjct: 4 SFTMIGGEGPNSYRDHSKYQGALVEAAKEKINEAISTKLDI-----DFTSNLVNIADFGC 58
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S GPNTF AVQ +I+AV+ KY+ + S +EFQVFFND NDFNTLF+T+PP+
Sbjct: 59 SSGPNTFTAVQTLIDAVENKYKKE---------SNIEFQVFFNDSSNNDFNTLFKTLPPA 109
Query: 132 RKYFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLV 191
R YFA GVPGSF GR+ P+ E+ D SP WNK I CSG
Sbjct: 110 RLYFASGVPGSFFGRVLPRNSLHLGVSAYSLHFISKIPKEVKDRDSPVWNK-DIHCSGSS 168
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
K V++ Y Q+K D +FLNARA ELV GGL++ + PNGV M ++ G + F+G+
Sbjct: 169 KEVAKLYLGQYKIDVGSFLNARAQELVSGGLLLLLGSCRPNGVQMFETVEGMMIDFIGAS 228
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSP 311
L ++ +GLID++K+D+F +P+Y P A+ELK IIE NGCF IE + + P
Sbjct: 229 LNEIANQGLIDQQKLDTFKLPIYAPQADELKQIIEDNGCFTIEVFENIIHAK-GEYPLDP 287
Query: 312 ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
E +T + G V FG D ++K F K E + ++ K + ++L+R
Sbjct: 288 EFLTVSFKVTVGGSVASLFGQDGMEKTFELVKEKTQE--MLPQIAKAKPGMQYLIVLRR 344
|
|
| TAIR|locus:504956193 AT1G15125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 144/358 (40%), Positives = 217/358 (60%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
M GGDG SYA+NSS+QR I+AA+ ++ I +LD+ + F +F +ADFGCS G
Sbjct: 1 MNGGDGASSYARNSSYQRGAIEAAEALLRNEINARLDITNHSFS----SFTIADFGCSSG 56
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKY 134
PNT IAV II+A+ K+ + + N+++ +FQVFFND DFN LF +PP R Y
Sbjct: 57 PNTVIAVDIIIQALYHKFTS----SLPNTTTP-QFQVFFNDVSHTDFNALFALLPPQRPY 111
Query: 135 FAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLVKGV 194
F GVPGSF+G LFPK E+ D+ SPA+N+G I +G V
Sbjct: 112 FVAGVPGSFYGNLFPKAHLNLAYSSCALCWLSDLPSELTDTSSPAYNRGRIHYTGASAEV 171
Query: 195 SEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNG-VPMIDSNGGKLYGFLGSCLI 253
++AYS+Q+K D + FL+AR+ EL GL+ ++ +P+G + +++ G + LGSCL+
Sbjct: 172 AQAYSSQYKKDIKLFLHARSQELAENGLMALIVPGVPDGFLDCQEASTGSEFDLLGSCLM 231
Query: 254 DMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPES 313
DM +G+I+EE+V+SFN+P+Y+ T +EL+ II NG +I++M+ L P ES
Sbjct: 232 DMAKEGIIEEEEVNSFNLPIYYTTPKELEDIIRSNGELKIDKMETLGSMDAQDTMPDLES 291
Query: 314 VTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAEN-FIFGELIKDHNNVNLFVLLKR 370
+RAV EG+V+ HFG+ ++D +F+ + K A + FI + H ++ +F LL R
Sbjct: 292 RVLYLRAVLEGLVRTHFGHQILDDLFDRYALKLAHSSFILQP--QTHKSIMIFALLSR 347
|
|
| TAIR|locus:2082157 AT3G44840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 151/361 (41%), Positives = 208/361 (57%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SF M+GG+G SY ++S +Q +++AA E I+E+I KL++ D +ADFGC
Sbjct: 4 SFTMIGGEGPESYRQHSKYQGGLLEAATEKINEAISTKLNI-----DLASNLVNIADFGC 58
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S GPNTF AVQ II+AV+ KY+ +N+ +EFQVFFND NDFNTLF+T+PP+
Sbjct: 59 STGPNTFRAVQTIIDAVEHKYQ------QENNLEEIEFQVFFNDSSNNDFNTLFKTLPPA 112
Query: 132 RKYFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLV 191
RKYFA GVP SF GR+ P+ +I D S AWNK I C+G
Sbjct: 113 RKYFATGVPASFFGRVLPRSSLHVGVSSYSLHFLSKIPKKIKDCDSHAWNK-DIHCTGFS 171
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS-LPNGVPMIDSNGGKLYGFLGS 250
K V AY Q+K D E+FL ARA ELV GGL+ F+L S LPNGV M ++ G + +GS
Sbjct: 172 KEVVRAYLDQYKIDMESFLTARAQELVSGGLL-FLLGSCLPNGVQMSETLNGMMIDCIGS 230
Query: 251 CLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPS 310
L D+ +GLID+EK+D+F +P+Y A E+K IIE N + IER D + +
Sbjct: 231 SLNDIAKQGLIDQEKLDTFKLPIYVAYAGEIKQIIEDNVYYTIERFDIISQEN-EEIPLD 289
Query: 311 PESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
PE +T + G+V HFG +++K F K E + +L + ++LKR
Sbjct: 290 PEFLTVSFKVTVGGIVASHFGQHVMEKTFEVVKTKTQE--MLPQLANAKPGMQYLIVLKR 347
Query: 371 V 371
+
Sbjct: 348 I 348
|
|
| TAIR|locus:2082112 FAMT "farnesoic acid carboxyl-O-methyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 147/359 (40%), Positives = 204/359 (56%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
SF M+GG+G SY ++S +Q ++ AAKE I+E+I KLD+ D T +ADFGC
Sbjct: 4 SFTMIGGEGPNSYREHSKYQGALVIAAKEKINEAISTKLDI-----DFTSNLVNIADFGC 58
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S GPNTF AVQ +I+AV+ KY+ + ++ +EFQVFFND NDFNTLF+T+PP+
Sbjct: 59 SSGPNTFTAVQTLIDAVENKYKKE------SNIEGIEFQVFFNDSSNNDFNTLFKTLPPA 112
Query: 132 RKYFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLV 191
R YFA GVPGSF GR+ PK EI D S WNK I CSG
Sbjct: 113 RLYFASGVPGSFFGRVLPKNSLHVGVSSYSLHFVSKVPKEIKDRDSLVWNK-DIHCSGSS 171
Query: 192 KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSC 251
K V + Y Q+K D +FL ARA ELV GGL++ + P GV M ++ G + F+GS
Sbjct: 172 KEVVKLYLGQYKIDVGSFLTARAQELVSGGLLLLLGSCRPTGVQMFETVEGMMIDFIGSS 231
Query: 252 LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSP 311
L ++ +GLID++K+D+F +P+Y P +ELK IIE N CF IE +K+ P
Sbjct: 232 LNEIANQGLIDQQKLDTFKLPIYAPNVDELKQIIEDNKCFTIEAFEKISHAK-GEYPLDP 290
Query: 312 ESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
E +TS + G V FG D ++K + K E + ++ K + ++L+R
Sbjct: 291 EYLTSAFKVTVGGSVASLFGQDGMEKTYELVKEKTQE--MLPQIAKAKPGMQYLIVLRR 347
|
|
| TAIR|locus:2200186 AT1G68040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 140/342 (40%), Positives = 193/342 (56%)
Query: 8 VLPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLA 67
++ S PM GGDG SY+KNS QR KE I + + +KL+ K+L D+ TF++A
Sbjct: 6 IVRNSLPMSGGDGPNSYSKNSHLQRKTTSLLKEKIDKLVLEKLNAKTLISSDS-NTFRIA 64
Query: 68 DFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT 127
D GC+ GPNTF V NII++++T R +++SS EF VFFND NDFNTLF +
Sbjct: 65 DLGCATGPNTFFLVDNIIKSIETSLR-------KSNSSKPEFLVFFNDLPQNDFNTLFTS 117
Query: 128 MPPSRKYFAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIIC 187
+P R Y A GVPGSF+GR+ P+ E+LD S AWNKG +
Sbjct: 118 LPQDRSYLAVGVPGSFYGRVLPQSSVHIVVTMGATHWLSSVPKEVLDKSSKAWNKGKVHY 177
Query: 188 SGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGF 247
S V +AY QF D E FL ARA E+V GGL+V + +P G+P + +Y
Sbjct: 178 SNAADEVVKAYRDQFGRDMEKFLEARATEIVSGGLLVVGMCGIPKGMPFSNLADSIMYTS 237
Query: 248 LGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRL 307
+ L M ++GLI EE+VD+FNIP+Y T EE+ ++ +NGCF +E M+ L DP
Sbjct: 238 MADVLTQMHSEGLISEEQVDTFNIPIYSATPEEVTVLVVKNGCFTVESME-LMDPTAWLK 296
Query: 308 KPSP-ESVTSQ---IRAVFEGVVKEHFGYDLVDKIFNFFTAK 345
+P+ E V I+A + HFG L+D +F+ TAK
Sbjct: 297 RPTNVEDVRHWMVCIKATMGSLFINHFGEHLLDDVFDRLTAK 338
|
|
| TAIR|locus:2033409 PXMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 133/334 (39%), Positives = 192/334 (57%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
M+GGDG SY + SS+QR +++A K+ ++++I LDL D F +ADFGC+ G
Sbjct: 9 MIGGDGPESYNQQSSYQRALLEATKDKMTKAISANLDL-----DLISNRFIVADFGCASG 63
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKY 134
PNTF+AVQNII+AV+ KYR ++ QN + +EFQV FND NDFNTLFQT+PP R+Y
Sbjct: 64 PNTFVAVQNIIDAVEEKYR---RETGQNPADNIEFQVLFNDFSLNDFNTLFQTLPPGRRY 120
Query: 135 FAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLVKGV 194
F+ GVPGSF R+ PK I+D SP WNK + C+G V
Sbjct: 121 FSAGVPGSFFERVLPKESFHIGVMSYAFHFTSKIPKGIMDRDSPLWNK-DMQCTGFNPAV 179
Query: 195 SEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLID 254
+AY Q+ DT+ L+ARA ELVPGGL++ + L +GV M ++ G + F+G L D
Sbjct: 180 KKAYLDQYSIDTKILLDARAEELVPGGLMLLLGSCLRDGVKMSETPKGTVMDFIGESLSD 239
Query: 255 MTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESV 314
+ +G+ ++EKVD+F +YF E++ IIE NG F IE + + P+++
Sbjct: 240 LAKQGVTEQEKVDTFRTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHAK-NEFPFDPKTL 298
Query: 315 TSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAE 348
+A + + HFG +++ K F K E
Sbjct: 299 AISFKAFYGAFISAHFGVEVMRKAFELVEVKARE 332
|
|
| TAIR|locus:2033414 AT1G66690 "AT1G66690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 135/356 (37%), Positives = 199/356 (55%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
M+GG G SY + SS+QR +++AAK+ ++E+I LDL D F +ADFGC+ G
Sbjct: 9 MIGGYGPESYNQQSSYQRALLEAAKDKMTEAISANLDL-----DLISNRFIVADFGCASG 63
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKY 134
PNTF+AVQNII+AV+ KY ++ QN +EFQV FND NDFNTLFQT+PP R+Y
Sbjct: 64 PNTFVAVQNIIDAVEEKYL---RETGQNPEDNIEFQVLFNDLRINDFNTLFQTLPPGRRY 120
Query: 135 FAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLVKGV 194
F+ GVPGSF R+ PK I+D SP WNK + C+G V
Sbjct: 121 FSAGVPGSFFNRVLPKQSFHIAVMSYAFLFTSKIPKGIMDRDSPLWNK-DMQCTGFNPAV 179
Query: 195 SEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLID 254
+AY Q+ DT+ L+ARA EL+PGGL++ + + +GV M ++ G + F+G L D
Sbjct: 180 KKAYLEQYSIDTKNLLDARAEELMPGGLMLLLGSCMRDGVKMSETLKGTVMDFIGESLND 239
Query: 255 MTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESV 314
+ KG+ ++EKVD+F +YF E++ IIE NG F IE + + P+++
Sbjct: 240 LAQKGVTEQEKVDTFKTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHSK-NEFPLDPKTL 298
Query: 315 TSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
+A++ + HFG +++ K F K E L K + ++L++
Sbjct: 299 AISFKALYGAFISAHFGIEVMRKAFELVEVKAREQI--SRLHKVKPGMQYLIVLRK 352
|
|
| TAIR|locus:2033389 AT1G66720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 131/336 (38%), Positives = 191/336 (56%)
Query: 15 MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVG 74
MVGG+G SY ++SS+QR ++ AAK+ I+ I L L + F +ADFGC+ G
Sbjct: 9 MVGGEGPESYKQHSSYQRDLLKAAKDKINAVISTNLSLNLIS-----NRFSVADFGCASG 63
Query: 75 PNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKY 134
PNTF+AVQNII+AV+ KY ++ QN +EFQV FND NDFNTLFQ +P R+Y
Sbjct: 64 PNTFVAVQNIIDAVEEKYL---RETGQNPDDNIEFQVLFNDLSNNDFNTLFQGLPSGRRY 120
Query: 135 FAFGVPGSFHGRLFPKXXXXXXXXXXXXXXXXXXXXEILDSRSPAWNKGSIICSGLVKGV 194
++ +PGSF R+ PK I D SP WN+ + C+G V
Sbjct: 121 YSAAIPGSFFDRVLPKHSIHIGVMNYAFQFTSKIPKGISDRNSPLWNR-DMHCTGFNNKV 179
Query: 195 SEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLID 254
+AY QF D++ L+ARA ELVP GL++ + L +G+ M ++ G + +G+ L D
Sbjct: 180 KKAYLDQFSLDSKNILDARAEELVPEGLMLLLGSCLRDGIKMSETYRGIVLDLIGASLND 239
Query: 255 MTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESV 314
+ +G+I+++KV+SFNI LY EL+ IIE NG F IE + + P L P +V
Sbjct: 240 LAQQGVIEKDKVESFNITLYIAEEGELRQIIEENGKFTIEAFEDIIQPNGESLDPKILAV 299
Query: 315 TSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENF 350
+ +++ F G++ HFG + + K F AK + F
Sbjct: 300 S--LKSAFGGILSAHFGAEAMMKAFELVEAKAHQEF 333
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKR0 | MT878_ARATH | 2, ., 1, ., 1, ., - | 0.4570 | 0.9436 | 0.9750 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.1.1.141 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 373 | |||
| pfam03492 | 331 | pfam03492, Methyltransf_7, SAM dependent carboxyl | 1e-120 | |
| PLN02668 | 386 | PLN02668, PLN02668, indole-3-acetate carboxyl meth | 5e-63 |
| >gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-120
Identities = 148/337 (43%), Positives = 202/337 (59%), Gaps = 22/337 (6%)
Query: 48 DKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSAL 107
++ + L + + K+AD GCS GPNTF+AV NII+ V+ KY+ ++N
Sbjct: 2 EEAISELLLRNLFPNSIKIADLGCSSGPNTFLAVSNIIDTVEKKYQ---KENILEP---P 55
Query: 108 EFQVFFNDHYGNDFNTLFQTMPPS----RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLN 163
EFQVFFND NDFNTLF+ +PP R YF GVPGSF+GRLFP++SLHF +SS SL+
Sbjct: 56 EFQVFFNDLPSNDFNTLFKLLPPFQKKKRSYFVSGVPGSFYGRLFPRNSLHFVHSSYSLH 115
Query: 164 WLSKISKEILDSRSPAWNKGSIICSGL-VKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222
WLS++ K + D SPAWNKG+I SG + V +AY QFK D FL ARA ELV GGL
Sbjct: 116 WLSQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEELVSGGL 175
Query: 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELK 282
+V P+ V ++ G + LG L D+ ++GLI+EEK+DSFNIP+Y P+ EE+K
Sbjct: 176 MVLTFLGRPS-VDPSETECGIFWDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPSPEEVK 234
Query: 283 AIIERNGCFRIERMDKLPDPPLMRLK---------PSPESVTSQIRAVFEGVVKEHFGYD 333
IIE+ G F IER++ + P V S +RAV E ++ HFG D
Sbjct: 235 EIIEKEGSFTIERLEIIKHPNGEVPWDESDSEDKVEDGRFVASSVRAVVEPMLVAHFGED 294
Query: 334 LVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
++DK+F+ + K +E+ EL +N+ V L R
Sbjct: 295 IMDKLFDRYAKKLSEHLSK-ELQNAKKTINVVVSLSR 330
|
This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331 |
| >gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 5e-63
Identities = 118/352 (33%), Positives = 173/352 (49%), Gaps = 39/352 (11%)
Query: 13 FPMVGGDGDYSYAKNSSFQRMIIDAAKEMIS--ESIFDKLDLKSLGFDDTCGTFKLADFG 70
M GG G+ SYA NS Q + A+ M+ E D + L S F D G
Sbjct: 19 LCMKGGKGEGSYANNSQAQAL---HARSMLHLLEETLDNVHLNS----SPEVPFTAVDLG 71
Query: 71 CSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP 130
CS G NT + I++ + +Y + D EF FF+D NDFNTLFQ +PP
Sbjct: 72 CSSGSNTIHIIDVIVKHMSKRYESAGLD-------PPEFSAFFSDLPSNDFNTLFQLLPP 124
Query: 131 ----------------SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILD 174
R YFA GVPGSF+ RLFP S+ +S+ SL+WLS++ + + D
Sbjct: 125 LANYGGSMEECLAASGHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVTD 184
Query: 175 SRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGV 234
RS A+NKG + G + + AY QF+ D FL ARA E+ GG + V +
Sbjct: 185 KRSAAYNKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVD 244
Query: 235 PMIDSNGGKLYG-FLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRI 293
P G L+G D+ +GL+ EK DSFNIP+Y P+ ++ K ++E NG F I
Sbjct: 245 PTDQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAI 304
Query: 294 ERMDKLP-DPPLMRLKPSPES-----VTSQIRAVFEGVVKEHFGYDLVDKIF 339
++++ PL+ +P + + + R+V +V H G +L +++F
Sbjct: 305 DKLEVFKGGSPLVVNEPDDAAEVGRAMANSCRSVAGVLVDAHIGEELSNELF 356
|
Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| PLN02668 | 386 | indole-3-acetate carboxyl methyltransferase | 100.0 | |
| PF03492 | 334 | Methyltransf_7: SAM dependent carboxyl methyltrans | 100.0 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.54 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.52 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 99.37 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.37 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 99.09 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 98.92 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.91 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 98.91 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.89 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.86 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 98.86 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.86 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.84 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 98.84 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.74 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 98.7 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.69 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.65 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.6 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.59 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 98.57 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.56 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.56 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.54 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.54 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.52 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.51 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.49 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.46 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.46 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.45 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.44 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.43 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 98.39 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 98.31 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 98.19 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 98.19 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 98.19 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 98.15 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 98.1 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 98.09 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 98.09 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 98.03 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 98.03 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.03 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 98.0 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 97.97 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 97.96 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 97.96 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 97.95 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 97.94 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 97.93 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 97.93 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 97.9 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 97.88 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 97.88 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 97.86 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 97.84 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 97.8 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 97.76 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 97.68 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 97.68 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.68 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 97.66 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.63 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 97.63 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 97.62 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 97.61 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.6 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 97.59 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 97.55 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.51 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.5 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.48 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.45 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 97.42 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 97.42 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.41 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 97.4 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.4 | |
| PRK04266 | 226 | fibrillarin; Provisional | 97.4 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 97.36 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.34 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 97.28 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.25 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 97.22 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 97.22 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 97.16 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 97.13 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 97.07 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 97.07 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 97.04 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 96.98 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.93 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 96.92 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 96.89 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 96.88 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.82 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.8 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 96.75 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 96.7 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 96.68 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.66 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 96.65 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 96.63 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 96.53 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.48 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.44 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 96.37 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 96.35 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 96.31 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.31 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 96.29 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 96.24 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 96.21 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.13 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 95.9 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 95.89 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 95.88 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 95.62 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.6 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 95.44 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 95.38 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 95.37 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 95.28 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 95.23 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.2 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 95.01 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 94.93 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 94.82 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 94.7 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 94.63 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 94.27 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 94.22 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 94.21 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 93.69 | |
| PLN02366 | 308 | spermidine synthase | 93.64 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 93.2 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 93.16 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 93.08 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 92.65 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 92.4 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 92.17 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 92.12 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 91.95 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 91.9 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 91.82 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 91.53 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 91.53 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 91.44 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 91.35 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 91.26 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 90.89 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 90.87 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 90.17 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 89.01 | |
| PF08123 | 205 | DOT1: Histone methylation protein DOT1 ; InterPro: | 87.84 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 87.35 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 86.87 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 85.68 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 84.18 | |
| COG0030 | 259 | KsgA Dimethyladenosine transferase (rRNA methylati | 83.31 | |
| PF06859 | 110 | Bin3: Bicoid-interacting protein 3 (Bin3); InterPr | 82.68 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 82.62 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 82.37 | |
| KOG1661 | 237 | consensus Protein-L-isoaspartate(D-aspartate) O-me | 81.86 | |
| PF11968 | 219 | DUF3321: Putative methyltransferase (DUF3321); Int | 81.47 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 81.17 | |
| PRK11727 | 321 | 23S rRNA mA1618 methyltransferase; Provisional | 80.74 | |
| PF13679 | 141 | Methyltransf_32: Methyltransferase domain | 80.3 | |
| PRK03522 | 315 | rumB 23S rRNA methyluridine methyltransferase; Rev | 80.29 |
| >PLN02668 indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-97 Score=737.46 Aligned_cols=347 Identities=33% Similarity=0.543 Sum_probs=310.3
Q ss_pred cCccccccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017363 9 LPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAV 88 (373)
Q Consensus 9 ~~~~~~M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i 88 (373)
++++|||+||+|++||++||.+|+.++..++|+|+++|+++. .+.+ +.++++|||||||+|+||+.+++.||++|
T Consensus 15 ~~~~l~M~gG~g~~SYa~nS~~Q~~~~~~~k~~leeai~~~~-~~~~----p~~~~~iaDlGcs~G~ntl~~vs~iI~~i 89 (386)
T PLN02668 15 LEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVH-LNSS----PEVPFTAVDLGCSSGSNTIHIIDVIVKHM 89 (386)
T ss_pred eccccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccC----CCcceeEEEecCCCCccHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999998853 2211 13689999999999999999999999999
Q ss_pred HHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC----------------ccceeeccCcccccCCCCCCc
Q 017363 89 QTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS----------------RKYFAFGVPGSFHGRLFPKSS 152 (373)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~----------------~~~f~~gvpgSFy~rlfP~~S 152 (373)
+++|+..+ +++|+|||||||||+||||+||++||+. ++||++|||||||+||||++|
T Consensus 90 ~~~~~~~~-------~~~pe~qv~~nDLP~NDFNtlF~~L~~~~~~~~~~~~~~~~~~~~~~f~~gvpGSFY~RLfP~~S 162 (386)
T PLN02668 90 SKRYESAG-------LDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGGSMEECLAASGHRSYFAAGVPGSFYRRLFPARS 162 (386)
T ss_pred HHHhhhcC-------CCCCcceEEecCCCCCCHHHHHhhchhhhhhhcchhhhccccCCCceEEEecCccccccccCCCc
Confidence 99998743 3578999999999999999999999752 249999999999999999999
Q ss_pred ceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCC
Q 017363 153 LHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPN 232 (373)
Q Consensus 153 vd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~ 232 (373)
+||+||++||||||++|+++.++.++.||||+||+++++|+|.+||++||++||..||++||+||+|||+||++++||++
T Consensus 163 lh~~~Ss~slHWLS~vP~~l~d~~s~~~Nkg~iyi~~~s~~v~~aY~~Qf~~D~~~FL~~Ra~ELvpGG~mvl~~~Gr~~ 242 (386)
T PLN02668 163 IDVFHSAFSLHWLSQVPESVTDKRSAAYNKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTS 242 (386)
T ss_pred eEEEEeeccceecccCchhhccCCcccccCCceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccCCCchhHHHH-HHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCC--CCCCCC-
Q 017363 233 GVPMIDSNGGKLYGF-LGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDP--PLMRLK- 308 (373)
Q Consensus 233 ~~~~~~~~~~~~~~~-l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~--~~~~~~- 308 (373)
..+..+...+.+|+. +.++|++||.||+|++||+|+||+|+|+||.+|++++|+++|+|+|+++|+++.. .+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~l~~al~dlv~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~~~~~~~~ 322 (386)
T PLN02668 243 VDPTDQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSPLVVNEPD 322 (386)
T ss_pred CCcccCCchhHHHHHHHHHHHHHHHHcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCcccccCcc
Confidence 666554445667877 9999999999999999999999999999999999999999999999999998742 111111
Q ss_pred ---CCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEE
Q 017363 309 ---PSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLK 369 (373)
Q Consensus 309 ---~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (373)
..++.+++++||++||+|++|||++++|+||+||+++++++.+... ...++.+++++|.
T Consensus 323 d~~~~g~~~a~~~RA~~E~ll~~HFG~~i~D~lF~r~~~~v~~~~~~~~--~~~~~~~~~~sL~ 384 (386)
T PLN02668 323 DAAEVGRAMANSCRSVAGVLVDAHIGEELSNELFLRVERRATSHAKELL--EKLQFFHIVASLS 384 (386)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhc--ccCceEEEEEEEe
Confidence 2356799999999999999999999999999999999998877631 3456888888875
|
|
| >PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-92 Score=691.49 Aligned_cols=317 Identities=44% Similarity=0.776 Sum_probs=261.5
Q ss_pred HHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCch
Q 017363 42 ISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDF 121 (373)
Q Consensus 42 l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDF 121 (373)
+++||.+++... ..+++++|||||||+|+||+.+|+.||++|+++|++.+. +++|+|||||||||+|||
T Consensus 1 ~~~ai~~~~~~~-----~~~~~~~iaD~GcS~G~Nsl~~~~~ii~~i~~~~~~~~~------~~~~e~~v~~nDlP~NDF 69 (334)
T PF03492_consen 1 LEEAIKELYNSS-----NNPKPFRIADLGCSSGPNSLLAVSNIIDAIRERCRSSNN------QPPPEFQVFFNDLPSNDF 69 (334)
T ss_dssp -HHHHHHHHHST-----TTTTEEEEEEES--SSHHHHHHHHHHHHHHHHHHHCTT-------SS--EEEEEEEE-TTS-H
T ss_pred ChHHHHHHHhcC-----CCCCceEEEecCCCCCccHHHHHHHHHHHHHHHhhhhcC------CCCCeEEEEeCCCCCccH
Confidence 467888765322 257899999999999999999999999999999987541 468999999999999999
Q ss_pred hhHhhcCCCC-------ccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeec-CCCHH
Q 017363 122 NTLFQTMPPS-------RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICS-GLVKG 193 (373)
Q Consensus 122 n~lf~~l~~~-------~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~-~~~~~ 193 (373)
|+||++||+. ++||++|||||||+||||++|+||+||++||||||++|+.+.++.+++||||+||++ +++++
T Consensus 70 n~lF~~l~~~~~~~~~~~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~~~~~Nkg~i~~~~~~~~~ 149 (334)
T PF03492_consen 70 NTLFKSLPSFQQSLKKFRNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKSSPAWNKGNIYISRTSPPE 149 (334)
T ss_dssp HHHHHCHHHHHHHHHHTTSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTTSTTTSTTTSSSSTTS-HH
T ss_pred HHHHHhChhhhhccCCCceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCcccccccccccccCcEEEecCCCHH
Confidence 9999999865 799999999999999999999999999999999999999999999999999999998 78999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc
Q 017363 194 VSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL 273 (373)
Q Consensus 194 ~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~ 273 (373)
|.+||++||++||..||++||+||+|||+||++++||++..+.. .+.+.+|++|+++|++||.||+|++|++|+||+|+
T Consensus 150 v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~-~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~ 228 (334)
T PF03492_consen 150 VAKAYAKQFQKDFSSFLKARAEELVPGGRMVLTFLGRDEEDPSS-TGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPI 228 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE-STSSTTS-TTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SB
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeccCcEEEEEEeecccccccc-CCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCc
Confidence 99999999999999999999999999999999999999855432 34567999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHhcCceEEeEEEEecCCCCCC---------CCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHH
Q 017363 274 YFPTAEELKAIIERNGCFRIERMDKLPDPPLMR---------LKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTA 344 (373)
Q Consensus 274 y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~---------~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~ 344 (373)
|+||.+|++++|+++|+|+|+++|.++...+.. ...+++.+++++||++||++++|||++++|+||+||++
T Consensus 229 Y~ps~eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~~~~~~d~~~~~~~~~~~iRA~~e~~l~~hfG~ei~D~LF~r~~~ 308 (334)
T PF03492_consen 229 YFPSPEEVRAIIEEEGSFEIEKLELFEQPWWSVPDDESWKEDAKEYARNVANYIRAVFEPLLKAHFGEEIMDELFERYAK 308 (334)
T ss_dssp B---HHHHHHHHHHHTSEEEEEEEEEEEETCCTCTTT-STTTHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHhcCCCEEEEEEEEEeecccccchhhhcccchhhhHHHHHHhHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 999999999999999999999999887322211 01357899999999999999999999999999999999
Q ss_pred HHHhhccccccccCCCeEEEEEEEEec
Q 017363 345 KFAENFIFGELIKDHNNVNLFVLLKRV 371 (373)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~r~ 371 (373)
+++++++... .+.+++++++++|+||
T Consensus 309 ~v~~~~~~~~-~~~~~~~~i~~~L~Rk 334 (334)
T PF03492_consen 309 KVAEHLEKEK-SRNMKFVNIVVSLTRK 334 (334)
T ss_dssp HHHHHHHHTH-TT-BEEEEEEEEEEE-
T ss_pred HHHHHHHHhh-ccCCCcEEEEEEEeeC
Confidence 9999998643 2446799999999998
|
Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.9e-13 Score=125.78 Aligned_cols=249 Identities=14% Similarity=0.145 Sum_probs=148.7
Q ss_pred chhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcC
Q 017363 22 YSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQ 101 (373)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~ 101 (373)
..|.+++..|.+....++.. + . .....+|+|+|||+|..+..+.+. +
T Consensus 7 ~~Y~~~~~~~~~~~~~ll~~--------~--~------~~~~~~vLDiGcG~G~~~~~la~~--------~--------- 53 (258)
T PRK01683 7 SLYLKFEDERTRPARDLLAR--------V--P------LENPRYVVDLGCGPGNSTELLVER--------W--------- 53 (258)
T ss_pred HHHHHHHHHhhcHHHHHHhh--------C--C------CcCCCEEEEEcccCCHHHHHHHHH--------C---------
Confidence 46999998887766543222 1 1 123579999999999998766322 1
Q ss_pred CCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCC
Q 017363 102 NSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWN 181 (373)
Q Consensus 102 ~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~n 181 (373)
+.-+|+..|+...-....=+.++ +.-|..+.. ..+.|++++|+++|+.++||+..
T Consensus 54 -----~~~~v~gvD~s~~~i~~a~~~~~--~~~~~~~d~----~~~~~~~~fD~v~~~~~l~~~~d-------------- 108 (258)
T PRK01683 54 -----PAARITGIDSSPAMLAEARSRLP--DCQFVEADI----ASWQPPQALDLIFANASLQWLPD-------------- 108 (258)
T ss_pred -----CCCEEEEEECCHHHHHHHHHhCC--CCeEEECch----hccCCCCCccEEEEccChhhCCC--------------
Confidence 12278888876432221111111 122444443 24457789999999999999752
Q ss_pred CCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC
Q 017363 182 KGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI 261 (373)
Q Consensus 182 kg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 261 (373)
...+|+.-.+-|+|||++++.+.+.... + .+.. ++++.....-
T Consensus 109 ------------------------~~~~l~~~~~~LkpgG~~~~~~~~~~~~-~--------~~~~----~~~~~~~~~w 151 (258)
T PRK01683 109 ------------------------HLELFPRLVSLLAPGGVLAVQMPDNLDE-P--------SHVL----MREVAENGPW 151 (258)
T ss_pred ------------------------HHHHHHHHHHhcCCCcEEEEECCCCCCC-H--------HHHH----HHHHHccCch
Confidence 3357778888999999999986542211 1 1111 1222211110
Q ss_pred ChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHh-hhhHHHhhhChHHHHHHHH
Q 017363 262 DEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAV-FEGVVKEHFGYDLVDKIFN 340 (373)
Q Consensus 262 ~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~-~e~~l~~h~g~~i~delf~ 340 (373)
.+.-...-..+.+.++.+++...+...| +.++..+.... ..+. +++.+..|+++. +.+++ .+++++..++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~-~~l~~~~~~~f~~ 225 (258)
T PRK01683 152 EQNLPDRGARRAPLPPPHAYYDALAPAA-CRVDIWHTTYY-HPMP---SAQAIVEWVKGTGLRPFL-DPLTESEQAAFLA 225 (258)
T ss_pred HHHhccccccCcCCCCHHHHHHHHHhCC-Cceeeeeeeee-eecC---CchhhhhhhhhccHHHHH-hhCCHHHHHHHHH
Confidence 0000001112346789999999999998 66654443222 2222 467888999984 46776 5899999999999
Q ss_pred HHHHHHHhh-ccccccccCCCeEEEEEEEEec
Q 017363 341 FFTAKFAEN-FIFGELIKDHNNVNLFVLLKRV 371 (373)
Q Consensus 341 ry~~~~~~~-~~~~~~~~~~~~~~~~~~l~r~ 371 (373)
.|.+.+.+. +..-.-.-...+..++++-+|+
T Consensus 226 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 257 (258)
T PRK01683 226 AYLARIAEAYPLQADGKVLLAFPRLFIVARRK 257 (258)
T ss_pred HHHHHHHHHCCCCCCCcEEcccceEEEEEEec
Confidence 999988766 3210000013456666666664
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.7e-13 Score=124.95 Aligned_cols=225 Identities=12% Similarity=0.106 Sum_probs=139.2
Q ss_pred chhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcC
Q 017363 22 YSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQ 101 (373)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~ 101 (373)
..|.+++..|......+++.+ . .....+|+|+|||+|..+..+. +++
T Consensus 5 ~~y~~~~~~~~~~~~~ll~~l----------~------~~~~~~vLDlGcG~G~~~~~l~--------~~~--------- 51 (255)
T PRK14103 5 DVYLAFADHRGRPFYDLLARV----------G------AERARRVVDLGCGPGNLTRYLA--------RRW--------- 51 (255)
T ss_pred HHHHHHHhHhhCHHHHHHHhC----------C------CCCCCEEEEEcCCCCHHHHHHH--------HHC---------
Confidence 469999999987766432222 1 1245799999999998877652 221
Q ss_pred CCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCC
Q 017363 102 NSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWN 181 (373)
Q Consensus 102 ~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~n 181 (373)
|..+|+-.|+..+- -...+. ..--|..+.. ..+.|.+++|+++|+.++||+..
T Consensus 52 -----p~~~v~gvD~s~~~-~~~a~~---~~~~~~~~d~----~~~~~~~~fD~v~~~~~l~~~~d-------------- 104 (255)
T PRK14103 52 -----PGAVIEALDSSPEM-VAAARE---RGVDARTGDV----RDWKPKPDTDVVVSNAALQWVPE-------------- 104 (255)
T ss_pred -----CCCEEEEEECCHHH-HHHHHh---cCCcEEEcCh----hhCCCCCCceEEEEehhhhhCCC--------------
Confidence 12367788874321 222221 1122444432 35567889999999999999753
Q ss_pred CCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC
Q 017363 182 KGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI 261 (373)
Q Consensus 182 kg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 261 (373)
...+|+.-++-|+|||++++.+.+..+. + .+..+ ..+..++-.
T Consensus 105 ------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~--------~~~~~----~~~~~~~~w 147 (255)
T PRK14103 105 ------------------------HADLLVRWVDELAPGSWIAVQVPGNFDA-P--------SHAAV----RALARREPW 147 (255)
T ss_pred ------------------------HHHHHHHHHHhCCCCcEEEEEcCCCcCC-h--------hHHHH----HHHhccCch
Confidence 2356666778999999999987663211 1 11111 122211111
Q ss_pred Chhh-hcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHh-hhhHHHhhhChHHHHHHH
Q 017363 262 DEEK-VDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAV-FEGVVKEHFGYDLVDKIF 339 (373)
Q Consensus 262 ~~e~-~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~-~e~~l~~h~g~~i~delf 339 (373)
.... -..+..+....+.+++..++++.| |++...+..... ... ....+..|+++. +.++++ .++++..+++-
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~ 221 (255)
T PRK14103 148 AKLLRDIPFRVGAVVQTPAGYAELLTDAG-CKVDAWETTYVH-QLT---GEDPVLDWITGTALRPVRE-RLSDDSWEQFR 221 (255)
T ss_pred hHHhcccccccCcCCCCHHHHHHHHHhCC-CeEEEEeeeeee-eCC---Cchhhhhhhhccchhhhhh-hCCHHHHHHHH
Confidence 1000 001223456789999999999999 987665543222 111 345688888864 456666 88988889999
Q ss_pred HHHHHHHHhh
Q 017363 340 NFFTAKFAEN 349 (373)
Q Consensus 340 ~ry~~~~~~~ 349 (373)
+.+.+.+.+.
T Consensus 222 ~~~~~~l~~~ 231 (255)
T PRK14103 222 AELIPLLREA 231 (255)
T ss_pred HHHHHHHHHH
Confidence 9999888765
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-11 Score=113.93 Aligned_cols=216 Identities=18% Similarity=0.255 Sum_probs=141.2
Q ss_pred chhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcC
Q 017363 22 YSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQ 101 (373)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~ 101 (373)
.+|.+.+..|+.+...+.+.+.... ..++.+|+|+|||+|..+..+....
T Consensus 7 ~~y~~~~~~q~~~~~~l~~~~~~~~-------------~~~~~~vLDlG~G~G~~~~~l~~~~----------------- 56 (240)
T TIGR02072 7 KTYDRHAKIQREMAKRLLALLKEKG-------------IFIPASVLDIGCGTGYLTRALLKRF----------------- 56 (240)
T ss_pred hchhHHHHHHHHHHHHHHHHhhhhc-------------cCCCCeEEEECCCccHHHHHHHHhC-----------------
Confidence 4799999999988887666654210 1235789999999999877663221
Q ss_pred CCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCC
Q 017363 102 NSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWN 181 (373)
Q Consensus 102 ~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~n 181 (373)
+..+++..|......+..-+.+++ +-.|+.+ ++....+|++++|+++++.++||+.
T Consensus 57 -----~~~~~~~~D~~~~~~~~~~~~~~~-~~~~~~~---d~~~~~~~~~~fD~vi~~~~l~~~~--------------- 112 (240)
T TIGR02072 57 -----PQAEFIALDISAGMLAQAKTKLSE-NVQFICG---DAEKLPLEDSSFDLIVSNLALQWCD--------------- 112 (240)
T ss_pred -----CCCcEEEEeChHHHHHHHHHhcCC-CCeEEec---chhhCCCCCCceeEEEEhhhhhhcc---------------
Confidence 223678888765554444444432 2234333 3445567889999999999999974
Q ss_pred CCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC
Q 017363 182 KGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI 261 (373)
Q Consensus 182 kg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 261 (373)
|...+|+...+-|+|||.+++..++.+.. ..+..++.. .+
T Consensus 113 -----------------------~~~~~l~~~~~~L~~~G~l~~~~~~~~~~------------~~~~~~~~~---~~-- 152 (240)
T TIGR02072 113 -----------------------DLSQALSELARVLKPGGLLAFSTFGPGTL------------HELRQSFGQ---HG-- 152 (240)
T ss_pred -----------------------CHHHHHHHHHHHcCCCcEEEEEeCCccCH------------HHHHHHHHH---hc--
Confidence 33468888899999999999987664421 112222221 11
Q ss_pred ChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHhhh-hHHHhhhChHHHHHHHH
Q 017363 262 DEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAVFE-GVVKEHFGYDLVDKIFN 340 (373)
Q Consensus 262 ~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~~e-~~l~~h~g~~i~delf~ 340 (373)
..+++.+++.+++... |....++...-...+. ++..+..++|.... ......++.+...++.+
T Consensus 153 -----------~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 216 (240)
T TIGR02072 153 -----------LRYLSLDELKALLKNS--FELLTLEEELITLSFD---DPLDVLRHLKKTGANGLSSGRTSRKQLKAFLE 216 (240)
T ss_pred -----------cCCCCHHHHHHHHHHh--cCCcEEEEEEEEEeCC---CHHHHHHHHHHhccCcCCCCCCCHHHHHHHHH
Confidence 2567899999999876 7665554332222222 56788899988654 33334478888888888
Q ss_pred HHHHHHH
Q 017363 341 FFTAKFA 347 (373)
Q Consensus 341 ry~~~~~ 347 (373)
.|.+...
T Consensus 217 ~~~~~~~ 223 (240)
T TIGR02072 217 RYEQEFQ 223 (240)
T ss_pred HHHHhhc
Confidence 8877664
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.7e-11 Score=113.56 Aligned_cols=207 Identities=13% Similarity=0.134 Sum_probs=129.7
Q ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCC
Q 017363 23 SYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQN 102 (373)
Q Consensus 23 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~ 102 (373)
.|.+++..|+.+...+...+. ....-+|+|+|||+|.+|..+ .+.
T Consensus 19 ~Y~~~~~~q~~~a~~l~~~l~----------------~~~~~~vLDiGcG~G~~~~~l--------~~~----------- 63 (251)
T PRK10258 19 HYEQHAELQRQSADALLAMLP----------------QRKFTHVLDAGCGPGWMSRYW--------RER----------- 63 (251)
T ss_pred hHhHHHHHHHHHHHHHHHhcC----------------ccCCCeEEEeeCCCCHHHHHH--------HHc-----------
Confidence 688889999988776544332 123468999999999877655 111
Q ss_pred CCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCC
Q 017363 103 SSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNK 182 (373)
Q Consensus 103 ~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nk 182 (373)
..+++..|+...--...-+..+ ...|..+.. ..-.+|++++|+++|+.++||+..
T Consensus 64 -----~~~v~~~D~s~~~l~~a~~~~~--~~~~~~~d~---~~~~~~~~~fD~V~s~~~l~~~~d--------------- 118 (251)
T PRK10258 64 -----GSQVTALDLSPPMLAQARQKDA--ADHYLAGDI---ESLPLATATFDLAWSNLAVQWCGN--------------- 118 (251)
T ss_pred -----CCeEEEEECCHHHHHHHHhhCC--CCCEEEcCc---ccCcCCCCcEEEEEECchhhhcCC---------------
Confidence 1168888875422111111111 123444443 333468899999999999999653
Q ss_pred CceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCC
Q 017363 183 GSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLID 262 (373)
Q Consensus 183 g~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 262 (373)
...+|+.-.+-|+|||+++++.++.++. ..+.++|..+-..+
T Consensus 119 -----------------------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~------------~el~~~~~~~~~~~--- 160 (251)
T PRK10258 119 -----------------------LSTALRELYRVVRPGGVVAFTTLVQGSL------------PELHQAWQAVDERP--- 160 (251)
T ss_pred -----------------------HHHHHHHHHHHcCCCeEEEEEeCCCCch------------HHHHHHHHHhccCC---
Confidence 3356777778999999999999986542 23444554332111
Q ss_pred hhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHhhhhHH-----HhhhChHHHHH
Q 017363 263 EEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAVFEGVV-----KEHFGYDLVDK 337 (373)
Q Consensus 263 ~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~~e~~l-----~~h~g~~i~de 337 (373)
...-+++.+|+...+...+ +++ ..+.+. ..+. ++..+..++|....... ...++...+.+
T Consensus 161 --------~~~~~~~~~~l~~~l~~~~-~~~-~~~~~~--~~f~---~~~~~l~~lk~~G~~~~~~~~~~~~~~~~~~~~ 225 (251)
T PRK10258 161 --------HANRFLPPDAIEQALNGWR-YQH-HIQPIT--LWFD---DALSAMRSLKGIGATHLHEGRDPRILTRSQLQR 225 (251)
T ss_pred --------ccccCCCHHHHHHHHHhCC-cee-eeeEEE--EECC---CHHHHHHHHHHhCCCCCCCCCCCCCCcHHHHHH
Confidence 1224678999999998765 543 222221 1232 67889999998765443 23466776666
Q ss_pred HHHHH
Q 017363 338 IFNFF 342 (373)
Q Consensus 338 lf~ry 342 (373)
+.+.|
T Consensus 226 ~~~~~ 230 (251)
T PRK10258 226 LQLAW 230 (251)
T ss_pred HHHhc
Confidence 66665
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-09 Score=97.98 Aligned_cols=222 Identities=13% Similarity=0.204 Sum_probs=129.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
..+.+|.|+|||.|.-|-++. +++. .-++.--|-....-..--..+| .--|.-|.-
T Consensus 29 ~~~~~v~DLGCGpGnsTelL~--------~RwP--------------~A~i~GiDsS~~Mla~Aa~rlp--~~~f~~aDl 84 (257)
T COG4106 29 ERPRRVVDLGCGPGNSTELLA--------RRWP--------------DAVITGIDSSPAMLAKAAQRLP--DATFEEADL 84 (257)
T ss_pred cccceeeecCCCCCHHHHHHH--------HhCC--------------CCeEeeccCCHHHHHHHHHhCC--CCceecccH
Confidence 457999999999999999884 3322 1133333322211111111111 112333333
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
...-|+...|++||+++||||..-|. .|..=-.+|.||
T Consensus 85 ----~~w~p~~~~dllfaNAvlqWlpdH~~--------------------------------------ll~rL~~~L~Pg 122 (257)
T COG4106 85 ----RTWKPEQPTDLLFANAVLQWLPDHPE--------------------------------------LLPRLVSQLAPG 122 (257)
T ss_pred ----hhcCCCCccchhhhhhhhhhccccHH--------------------------------------HHHHHHHhhCCC
Confidence 45668999999999999999876653 334444789999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCc-ccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNI-PLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~-P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
|.|.+.|++--++- -+.++.+. ++++ --+.++..+.+ ----+|+.-|-+++...+ =+|+--++.
T Consensus 123 g~LAVQmPdN~dep---------sH~~mr~~----A~~~-p~~~~l~~~~~~r~~v~s~a~Yy~lLa~~~-~rvDiW~T~ 187 (257)
T COG4106 123 GVLAVQMPDNLDEP---------SHRLMRET----ADEA-PFAQELGGRGLTRAPLPSPAAYYELLAPLA-CRVDIWHTT 187 (257)
T ss_pred ceEEEECCCccCch---------hHHHHHHH----HhcC-chhhhhCccccccCCCCCHHHHHHHhCccc-ceeeeeeee
Confidence 99999998744331 12333322 2222 11111111110 012357777778887765 344433322
Q ss_pred cCCCCCCCCCCHHHHHHhHHH-hhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCC----CeEEEEEEEEec
Q 017363 300 PDPPLMRLKPSPESVTSQIRA-VFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDH----NNVNLFVLLKRV 371 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~iRa-~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~----~~~~~~~~l~r~ 371 (373)
-.+.. .+.+.+..|+|+ +..|.+. .++++-...|.++|..++.+++... .+. .+--+|||-+|+
T Consensus 188 Y~h~l----~~a~aIvdWvkgTgLrP~L~-~L~e~~~~~FL~~Y~~~l~~aYP~~---~dGr~ll~FpRlFiVA~~~ 256 (257)
T COG4106 188 YYHQL----PGADAIVDWVKGTGLRPYLD-RLDEEERQRFLDRYLALLAEAYPPR---ADGRVLLAFPRLFIVATRG 256 (257)
T ss_pred ccccC----CCccchhhheeccccceecc-ccCHHHHHHHHHHHHHHHHHhCCCc---cCCcEEeecceEEEEEecC
Confidence 11211 135679999999 6668887 7888888999999999997754321 122 245567776664
|
|
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.6e-09 Score=98.50 Aligned_cols=170 Identities=14% Similarity=0.121 Sum_probs=95.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CC---CCccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MP---PSRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~---~~~~~f~~g 138 (373)
.-+|+|+|||+|..+..+.+.+ .+..+|+-.|+..+-. ...+. +. ..+--++.+
T Consensus 46 ~~~vLDiGcG~G~~~~~la~~~---------------------~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~v~~~~~ 103 (231)
T TIGR02752 46 GTSALDVCCGTADWSIALAEAV---------------------GPEGHVIGLDFSENML-SVGRQKVKDAGLHNVELVHG 103 (231)
T ss_pred CCEEEEeCCCcCHHHHHHHHHh---------------------CCCCEEEEEECCHHHH-HHHHHHHHhcCCCceEEEEe
Confidence 4699999999999888763322 1223678888754322 11111 11 111123333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. +..-.+|++++|+++++.++||++. +..+|+.-.+-|+
T Consensus 104 d---~~~~~~~~~~fD~V~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk 142 (231)
T TIGR02752 104 N---AMELPFDDNSFDYVTIGFGLRNVPD--------------------------------------YMQVLREMYRVVK 142 (231)
T ss_pred c---hhcCCCCCCCccEEEEecccccCCC--------------------------------------HHHHHHHHHHHcC
Confidence 3 3333468899999999999999752 3357777788999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++.-.+.++....... ....+..+.-.+..+...+....... ...-..+|+.+|+++.+++.| |++.+++.
T Consensus 143 ~gG~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~ 218 (231)
T TIGR02752 143 PGGKVVCLETSQPTIPGFKQL-YFFYFKYIMPLFGKLFAKSYKEYSWL--QESTRDFPGMDELAEMFQEAG-FKDVEVKS 218 (231)
T ss_pred cCeEEEEEECCCCCChHHHHH-HHHHHcChhHHhhHHhcCCHHHHHHH--HHHHHHcCCHHHHHHHHHHcC-CCeeEEEE
Confidence 999999877665443211000 00000111111111111111000000 011236789999999999999 98777765
Q ss_pred e
Q 017363 299 L 299 (373)
Q Consensus 299 ~ 299 (373)
+
T Consensus 219 ~ 219 (231)
T TIGR02752 219 Y 219 (231)
T ss_pred c
Confidence 4
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.7e-08 Score=95.59 Aligned_cols=156 Identities=15% Similarity=0.160 Sum_probs=90.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhh---HhhcCCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNT---LFQTMPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~---lf~~l~~-~~~~f~~ 137 (373)
..-+|+|+|||+|.++..+.... ..+|+--|+..+.-.. +.+.-.. .+-.|..
T Consensus 118 ~~~~VLDiGCG~G~~~~~La~~~-----------------------g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~ 174 (340)
T PLN02244 118 RPKRIVDVGCGIGGSSRYLARKY-----------------------GANVKGITLSPVQAARANALAAAQGLSDKVSFQV 174 (340)
T ss_pred CCCeEEEecCCCCHHHHHHHHhc-----------------------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 45789999999999998774321 0144444543322111 1111010 1123443
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+. +.+.-||++++|+|+|..++|++. |...+|+.-.+-|
T Consensus 175 ~D---~~~~~~~~~~FD~V~s~~~~~h~~--------------------------------------d~~~~l~e~~rvL 213 (340)
T PLN02244 175 AD---ALNQPFEDGQFDLVWSMESGEHMP--------------------------------------DKRKFVQELARVA 213 (340)
T ss_pred cC---cccCCCCCCCccEEEECCchhccC--------------------------------------CHHHHHHHHHHHc
Confidence 33 234447889999999999998864 3335777778899
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||+|++...+..+..+...... ..-...+..+... +.+| ...+.+|+..++++.| |+..+.+
T Consensus 214 kpGG~lvi~~~~~~~~~~~~~~l~----~~~~~~~~~i~~~----------~~~p-~~~s~~~~~~~l~~aG-f~~v~~~ 277 (340)
T PLN02244 214 APGGRIIIVTWCHRDLEPGETSLK----PDEQKLLDKICAA----------YYLP-AWCSTSDYVKLAESLG-LQDIKTE 277 (340)
T ss_pred CCCcEEEEEEecccccccccccCC----HHHHHHHHHHHhh----------ccCC-CCCCHHHHHHHHHHCC-CCeeEee
Confidence 999999998876544322111000 0011112222111 1223 2348999999999999 8776554
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.1e-08 Score=94.92 Aligned_cols=164 Identities=13% Similarity=0.157 Sum_probs=93.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC------CCccce
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP------PSRKYF 135 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~------~~~~~f 135 (373)
...+|+|+|||+|..+..+...+ .+.-+|+--|+..+--...-+..+ ..+--|
T Consensus 73 ~~~~VLDlGcGtG~~~~~la~~~---------------------~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~ 131 (261)
T PLN02233 73 MGDRVLDLCCGSGDLAFLLSEKV---------------------GSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEW 131 (261)
T ss_pred CCCEEEEECCcCCHHHHHHHHHh---------------------CCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEE
Confidence 35799999999999876552221 112256666665433222111111 011124
Q ss_pred eeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 136 AFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 136 ~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
..+.. ..--+|++|+|++++++++||+. |...+|+.-++
T Consensus 132 ~~~d~---~~lp~~~~sfD~V~~~~~l~~~~--------------------------------------d~~~~l~ei~r 170 (261)
T PLN02233 132 IEGDA---TDLPFDDCYFDAITMGYGLRNVV--------------------------------------DRLKAMQEMYR 170 (261)
T ss_pred EEccc---ccCCCCCCCEeEEEEecccccCC--------------------------------------CHHHHHHHHHH
Confidence 44433 23336889999999999999965 33467888889
Q ss_pred hhccCCeEEEEeccCCCCCCccCCCchhHHHHH-HHHHHHHh-hcCCCChhhhcccCcc---cccCCHHHHHHHHHhcCc
Q 017363 216 ELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFL-GSCLIDMT-TKGLIDEEKVDSFNIP---LYFPTAEELKAIIERNGC 290 (373)
Q Consensus 216 EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l-~~al~~mv-~eGli~~e~~d~f~~P---~y~ps~eE~~~~ie~~gs 290 (373)
-|||||++++.-+++++.... ..+++.+ ...+.-+. .-|. .+.+. .++ -.+++.+|+.+.+++.|
T Consensus 171 vLkpGG~l~i~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~y~--~l~~s~~~f~s~~el~~ll~~aG- 240 (261)
T PLN02233 171 VLKPGSRVSILDFNKSTQPFT-----TSMQEWMIDNVVVPVATGYGL--AKEYE--YLKSSINEYLTGEELEKLALEAG- 240 (261)
T ss_pred HcCcCcEEEEEECCCCCcHHH-----HHHHHHHHhhhhhHHHHHhCC--hHHHH--HHHHHHHhcCCHHHHHHHHHHCC-
Confidence 999999999998887653210 1111111 11111110 0122 11110 000 13789999999999999
Q ss_pred eEEeEEE
Q 017363 291 FRIERMD 297 (373)
Q Consensus 291 F~I~~le 297 (373)
|++.+..
T Consensus 241 F~~~~~~ 247 (261)
T PLN02233 241 FSSAKHY 247 (261)
T ss_pred CCEEEEE
Confidence 8765443
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.8e-07 Score=96.64 Aligned_cols=185 Identities=15% Similarity=0.253 Sum_probs=113.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CCC--Cccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MPP--SRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~~--~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.. .. ..+|+--|+...- -...+. ... .+--|..
T Consensus 267 ~~~vLDiGcG~G~~~~~la~--------~~---------------~~~v~gvDiS~~~-l~~A~~~~~~~~~~v~~~~-- 320 (475)
T PLN02336 267 GQKVLDVGCGIGGGDFYMAE--------NF---------------DVHVVGIDLSVNM-ISFALERAIGRKCSVEFEV-- 320 (475)
T ss_pred CCEEEEEeccCCHHHHHHHH--------hc---------------CCEEEEEECCHHH-HHHHHHHhhcCCCceEEEE--
Confidence 46899999999987765522 11 1257777775321 111111 111 1112333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+.+....+|++++|+++|..+++|+.. ...+|+.-++-|+|
T Consensus 321 -~d~~~~~~~~~~fD~I~s~~~l~h~~d--------------------------------------~~~~l~~~~r~Lkp 361 (475)
T PLN02336 321 -ADCTKKTYPDNSFDVIYSRDTILHIQD--------------------------------------KPALFRSFFKWLKP 361 (475)
T ss_pred -cCcccCCCCCCCEEEEEECCcccccCC--------------------------------------HHHHHHHHHHHcCC
Confidence 344556678899999999999999753 23577778899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++....+....+. ..+...+. ..|. ..++.+++.+++++.| |++...+..
T Consensus 362 gG~l~i~~~~~~~~~~~---------~~~~~~~~---~~g~-------------~~~~~~~~~~~l~~aG-F~~i~~~d~ 415 (475)
T PLN02336 362 GGKVLISDYCRSPGTPS---------PEFAEYIK---QRGY-------------DLHDVQAYGQMLKDAG-FDDVIAEDR 415 (475)
T ss_pred CeEEEEEEeccCCCCCc---------HHHHHHHH---hcCC-------------CCCCHHHHHHHHHHCC-Ceeeeeecc
Confidence 99999998876543321 01111111 2232 5679999999999999 987755522
Q ss_pred cCCCCCCCCCCHHHHHHhHHHhhhhH------HHhhhChHHHHHHHHHHHHHHHhh
Q 017363 300 PDPPLMRLKPSPESVTSQIRAVFEGV------VKEHFGYDLVDKIFNFFTAKFAEN 349 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~iRa~~e~~------l~~h~g~~i~delf~ry~~~~~~~ 349 (373)
...+..+++.+.+.+ +...+|++..+.+...+...+...
T Consensus 416 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 460 (475)
T PLN02336 416 -----------TDQFLQVLQRELDAVEKEKDEFISDFSEEDYNDIVGGWKAKLVRS 460 (475)
T ss_pred -----------hHHHHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHhHHHHHhhh
Confidence 123444443333332 223567887777777777766543
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=100.78 Aligned_cols=149 Identities=19% Similarity=0.238 Sum_probs=92.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc----CCCC-ccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT----MPPS-RKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~----l~~~-~~~f~~ 137 (373)
.-+|+|+|||+|..++.+.. . .+. +|+--|.. ..+-.-++. .... +-.|..
T Consensus 123 g~~VLDIGCG~G~~~~~la~--------~--------------g~~-~V~GiD~S-~~~l~q~~a~~~~~~~~~~i~~~~ 178 (322)
T PRK15068 123 GRTVLDVGCGNGYHMWRMLG--------A--------------GAK-LVVGIDPS-QLFLCQFEAVRKLLGNDQRAHLLP 178 (322)
T ss_pred CCEEEEeccCCcHHHHHHHH--------c--------------CCC-EEEEEcCC-HHHHHHHHHHHHhcCCCCCeEEEe
Confidence 36999999999999886621 1 011 47777743 333222221 1111 222332
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+++. .+-.++++|+++|..+|||+. |...+|+.-++-|
T Consensus 179 ---~d~e-~lp~~~~FD~V~s~~vl~H~~--------------------------------------dp~~~L~~l~~~L 216 (322)
T PRK15068 179 ---LGIE-QLPALKAFDTVFSMGVLYHRR--------------------------------------SPLDHLKQLKDQL 216 (322)
T ss_pred ---CCHH-HCCCcCCcCEEEECChhhccC--------------------------------------CHHHHHHHHHHhc
Confidence 2332 222278899999999999854 3346788888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||+|++..+..+..... .+...+.+..+...++.||.+++..++++.| |++.++.
T Consensus 217 kpGG~lvl~~~~i~~~~~~----------------------~l~p~~~y~~~~~~~~lps~~~l~~~L~~aG-F~~i~~~ 273 (322)
T PRK15068 217 VPGGELVLETLVIDGDENT----------------------VLVPGDRYAKMRNVYFIPSVPALKNWLERAG-FKDVRIV 273 (322)
T ss_pred CCCcEEEEEEEEecCCCcc----------------------ccCchhHHhcCccceeCCCHHHHHHHHHHcC-CceEEEE
Confidence 9999999987654422110 0111222333444457799999999999999 9877776
Q ss_pred Eec
Q 017363 298 KLP 300 (373)
Q Consensus 298 ~~~ 300 (373)
...
T Consensus 274 ~~~ 276 (322)
T PRK15068 274 DVS 276 (322)
T ss_pred eCC
Confidence 443
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-07 Score=89.33 Aligned_cols=190 Identities=13% Similarity=0.145 Sum_probs=111.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CCC-Cccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MPP-SRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~~-~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+.. .+ ..+|+..|+..+-. ...+. .+. .+-.|.
T Consensus 52 ~~~~VLDiGcG~G~~a~~la~--------~~---------------~~~v~giD~s~~~~-~~a~~~~~~~~~i~~~--- 104 (263)
T PTZ00098 52 ENSKVLDIGSGLGGGCKYINE--------KY---------------GAHVHGVDICEKMV-NIAKLRNSDKNKIEFE--- 104 (263)
T ss_pred CCCEEEEEcCCCChhhHHHHh--------hc---------------CCEEEEEECCHHHH-HHHHHHcCcCCceEEE---
Confidence 357899999999998876631 11 12677777754332 22222 111 112233
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
.+++...-+|++++|+++|..++|+++. .|...+|+.-++-|+|
T Consensus 105 ~~D~~~~~~~~~~FD~V~s~~~l~h~~~------------------------------------~d~~~~l~~i~r~LkP 148 (263)
T PTZ00098 105 ANDILKKDFPENTFDMIYSRDAILHLSY------------------------------------ADKKKLFEKCYKWLKP 148 (263)
T ss_pred ECCcccCCCCCCCeEEEEEhhhHHhCCH------------------------------------HHHHHHHHHHHHHcCC
Confidence 3445555678999999999888766431 1445788888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||+|+++-....+.... -+.+...+. ..+ ...++.+++.++++..| |++...+-.
T Consensus 149 GG~lvi~d~~~~~~~~~--------~~~~~~~~~---~~~-------------~~~~~~~~~~~~l~~aG-F~~v~~~d~ 203 (263)
T PTZ00098 149 NGILLITDYCADKIENW--------DEEFKAYIK---KRK-------------YTLIPIQEYGDLIKSCN-FQNVVAKDI 203 (263)
T ss_pred CcEEEEEEeccccccCc--------HHHHHHHHH---hcC-------------CCCCCHHHHHHHHHHCC-CCeeeEEeC
Confidence 99999987765432110 111111111 111 14579999999999999 887665522
Q ss_pred cCCCCCCCCCCHHHHH---HhHHHhhhhHHHhhhChHHHHHHHHHHHHHHH
Q 017363 300 PDPPLMRLKPSPESVT---SQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFA 347 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~---~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~ 347 (373)
. ..+ ...+. ..+++- +.-+...+|++..+.+-.-+...+.
T Consensus 204 ~--~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
T PTZ00098 204 S--DYW-----LELLQVELKKLEEK-KEEFLKLYSEKEYNSLKDGWTRKIK 246 (263)
T ss_pred c--HHH-----HHHHHHHHHHHHHh-HHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 1 111 11122 222221 2333446788887777777766654
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.8e-08 Score=93.46 Aligned_cols=159 Identities=17% Similarity=0.164 Sum_probs=93.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCCC---Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMPP---SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~~---~~~~f~~g 138 (373)
..+|+|+|||+|..+..+.+.+ +.|..+++--|+..+- -...+ .+.. ..+ +.-
T Consensus 54 ~~~iLDlGcG~G~~~~~l~~~~--------------------~~p~~~v~gvD~s~~m-l~~a~~~~~~~~~~~~--v~~ 110 (239)
T TIGR00740 54 DSNVYDLGCSRGAATLSARRNI--------------------NQPNVKIIGIDNSQPM-VERCRQHIAAYHSEIP--VEI 110 (239)
T ss_pred CCEEEEecCCCCHHHHHHHHhc--------------------CCCCCeEEEEeCCHHH-HHHHHHHHHhcCCCCC--eEE
Confidence 3589999999999888774332 1233477777774322 11221 1111 111 112
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+-+++..--+ .+.|+++|++++||++. .|...+|+.-.+-|+
T Consensus 111 ~~~d~~~~~~--~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~Lk 152 (239)
T TIGR00740 111 LCNDIRHVEI--KNASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGLN 152 (239)
T ss_pred EECChhhCCC--CCCCEEeeecchhhCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 2334443323 35789999999999752 133468888899999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhh-cCCCChhhh----cccCcccccCCHHHHHHHHHhcCceE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTT-KGLIDEEKV----DSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~----d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
|||++++.-..+.+... ..+.+...+..+.. .|. +++++ +.+.-.....|++|+++.+++.| |.
T Consensus 153 pgG~l~i~d~~~~~~~~--------~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG-F~ 221 (239)
T TIGR00740 153 PNGVLVLSEKFRFEDTK--------INHLLIDLHHQFKRANGY-SELEISQKRTALENVMRTDSIETHKARLKNVG-FS 221 (239)
T ss_pred CCeEEEEeecccCCCHh--------HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHhccCCCCCHHHHHHHHHHcC-Cc
Confidence 99999998655443322 12233333333333 344 44333 23333445579999999999999 75
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.8e-07 Score=82.33 Aligned_cols=218 Identities=16% Similarity=0.063 Sum_probs=117.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC--CCCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM--PPSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l--~~~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+.+.. . |.-+++--|+...-....-+.. .....-|..+.
T Consensus 19 ~~~~vLdiG~G~G~~~~~~a~~~--------~-------------~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d 77 (241)
T PRK08317 19 PGDRVLDVGCGPGNDARELARRV--------G-------------PEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD 77 (241)
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--------C-------------CCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc
Confidence 35799999999999887664322 0 1125666666433211111110 01112233332
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+...-++++++|++++..++||+.+ +..+|+.-.+-|+|
T Consensus 78 ---~~~~~~~~~~~D~v~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~ 116 (241)
T PRK08317 78 ---ADGLPFPDGSFDAVRSDRVLQHLED--------------------------------------PARALAEIARVLRP 116 (241)
T ss_pred ---cccCCCCCCCceEEEEechhhccCC--------------------------------------HHHHHHHHHHHhcC
Confidence 2233467889999999999999753 33577788889999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++....-+.... .......+..+...|.. .+. -..+..++...+++.| |+...++.+
T Consensus 117 gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~l~~aG-f~~~~~~~~ 177 (241)
T PRK08317 117 GGRVVVLDTDWDTLVW--HSGDRALMRKILNFWSD---HFA-------------DPWLGRRLPGLFREAG-LTDIEVEPY 177 (241)
T ss_pred CcEEEEEecCCCceee--cCCChHHHHHHHHHHHh---cCC-------------CCcHHHHHHHHHHHcC-CCceeEEEE
Confidence 9999988754221110 00111122222222321 111 1124568999999999 987777655
Q ss_pred cCCC-CCCCCCCHHHHHHhHHHhhhhHH-HhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEEec
Q 017363 300 PDPP-LMRLKPSPESVTSQIRAVFEGVV-KEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKRV 371 (373)
Q Consensus 300 ~~~~-~~~~~~~~~~~~~~iRa~~e~~l-~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~r~ 371 (373)
.... .+ .+......+......+. ...+.++-+++++..+++..... .+ +-++.++++..||
T Consensus 178 ~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~-----~~~~~~~~~~~~k 240 (241)
T PRK08317 178 TLIETDL----KEADKGFGLIRAARRAVEAGGISADEADAWLADLAQLARAG--EF-----FFSVTGFLVVGRK 240 (241)
T ss_pred EEeccCc----chhhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcC--CE-----EEEEEEEEEEEeC
Confidence 3211 11 12222223332222222 22345667788888777654321 11 2356777777666
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.4e-09 Score=91.98 Aligned_cols=138 Identities=22% Similarity=0.277 Sum_probs=88.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
....+|+|+|||+|.++..+ .+. .. ++...|.-...-.. ...++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l--------~~~--------------~~--~~~g~D~~~~~~~~------------~~~~~ 64 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRAL--------AKR--------------GF--EVTGVDISPQMIEK------------RNVVF 64 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHH--------HHT--------------TS--EEEEEESSHHHHHH------------TTSEE
T ss_pred CCCCEEEEEcCCCCHHHHHH--------HHh--------------CC--EEEEEECCHHHHhh------------hhhhh
Confidence 35679999999999876655 111 11 67777775322111 01111
Q ss_pred cccc--cCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 141 GSFH--GRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 141 gSFy--~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
..|. ...+|++++|+|+|+.+|||+. |+..+|+.-.+-|+
T Consensus 65 ~~~~~~~~~~~~~~fD~i~~~~~l~~~~--------------------------------------d~~~~l~~l~~~Lk 106 (161)
T PF13489_consen 65 DNFDAQDPPFPDGSFDLIICNDVLEHLP--------------------------------------DPEEFLKELSRLLK 106 (161)
T ss_dssp EEEECHTHHCHSSSEEEEEEESSGGGSS--------------------------------------HHHHHHHHHHHCEE
T ss_pred hhhhhhhhhccccchhhHhhHHHHhhcc--------------------------------------cHHHHHHHHHHhcC
Confidence 1221 3345889999999999999977 33468888889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
|||++++..+.+....+ .. +... ....... --..+.+.++++.++++.| |+|..
T Consensus 107 pgG~l~~~~~~~~~~~~----------~~----~~~~---~~~~~~~-----~~~~~~~~~~~~~ll~~~G-~~iv~ 160 (161)
T PF13489_consen 107 PGGYLVISDPNRDDPSP----------RS----FLKW---RYDRPYG-----GHVHFFSPDELRQLLEQAG-FEIVE 160 (161)
T ss_dssp EEEEEEEEEEBTTSHHH----------HH----HHHC---CGTCHHT-----TTTEEBBHHHHHHHHHHTT-EEEEE
T ss_pred CCCEEEEEEcCCcchhh----------hH----HHhc---CCcCccC-----ceeccCCHHHHHHHHHHCC-CEEEE
Confidence 99999999998753100 01 1111 1111100 1115669999999999999 98753
|
... |
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.2e-07 Score=89.51 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=63.8
Q ss_pred CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 146 RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 146 rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
.+-+..++|+|+|+.+|||+.. ...+|+.-++-|+|||.|++
T Consensus 182 ~lp~~~~FD~V~s~gvL~H~~d--------------------------------------p~~~L~el~r~LkpGG~Lvl 223 (314)
T TIGR00452 182 QLHELYAFDTVFSMGVLYHRKS--------------------------------------PLEHLKQLKHQLVIKGELVL 223 (314)
T ss_pred HCCCCCCcCEEEEcchhhccCC--------------------------------------HHHHHHHHHHhcCCCCEEEE
Confidence 4444568999999999999642 23578888899999999999
Q ss_pred EeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 226 VLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 226 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
.....+..... .+...+.+..+.-.++.||.+++..++++.| |+..++...
T Consensus 224 etl~i~g~~~~----------------------~l~p~~ry~k~~nv~flpS~~~L~~~L~~aG-F~~V~i~~~ 274 (314)
T TIGR00452 224 ETLVIDGDLNT----------------------VLVPKDRYAKMKNVYFIPSVSALKNWLEKVG-FENFRILDV 274 (314)
T ss_pred EEEEecCcccc----------------------ccCchHHHHhccccccCCCHHHHHHHHHHCC-CeEEEEEec
Confidence 87653321110 0111222333444567899999999999999 986665533
|
Known examples to date are restricted to the proteobacteria. |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.9e-08 Score=91.77 Aligned_cols=168 Identities=21% Similarity=0.244 Sum_probs=104.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCc---cceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSR---KYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~---~~f~~g 138 (373)
+..+|+|+|||||--|+.+...+ . +-+|..-|...+..+.-=+-+.... -.|+.|
T Consensus 51 ~g~~vLDva~GTGd~a~~~~k~~--------g--------------~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~ 108 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLAKSV--------G--------------TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG 108 (238)
T ss_pred CCCEEEEecCCccHHHHHHHHhc--------C--------------CceEEEEECCHHHHHHHHHHhhccCccceEEEEe
Confidence 46999999999999999884333 1 2378888887766555444443321 224554
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. ..+--||++|+|++.+++.|||+.+.+. .|+--++=||
T Consensus 109 d---Ae~LPf~D~sFD~vt~~fglrnv~d~~~--------------------------------------aL~E~~RVlK 147 (238)
T COG2226 109 D---AENLPFPDNSFDAVTISFGLRNVTDIDK--------------------------------------ALKEMYRVLK 147 (238)
T ss_pred c---hhhCCCCCCccCEEEeeehhhcCCCHHH--------------------------------------HHHHHHHhhc
Confidence 4 4666789999999999999999887664 4555568999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
|||++++.=+++++..+.......+.+..+---+-.++..+ .++..--....--+|+.+++.+.+++.| |+...
T Consensus 148 pgG~~~vle~~~p~~~~~~~~~~~~~~~~v~P~~g~~~~~~--~~~y~yL~eSi~~~p~~~~l~~~~~~~g-f~~i~ 221 (238)
T COG2226 148 PGGRLLVLEFSKPDNPVLRKAYILYYFKYVLPLIGKLVAKD--AEAYEYLAESIRRFPDQEELKQMIEKAG-FEEVR 221 (238)
T ss_pred CCeEEEEEEcCCCCchhhHHHHHHHHHHhHhhhhceeeecC--hHHHHHHHHHHHhCCCHHHHHHHHHhcC-ceEEe
Confidence 99999998888775533211101111110111111111100 0111111122336799999999999999 87544
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.5e-07 Score=88.00 Aligned_cols=158 Identities=16% Similarity=0.225 Sum_probs=90.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC----Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP----SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~----~~~~f~~ 137 (373)
+..+|+|+|||+|..|..+... ..+|+..|+...--...=+.+.. .+-.|+.
T Consensus 44 ~~~~vLDiGcG~G~~a~~la~~------------------------g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~ 99 (255)
T PRK11036 44 RPLRVLDAGGGEGQTAIKLAEL------------------------GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH 99 (255)
T ss_pred CCCEEEEeCCCchHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE
Confidence 3579999999999988777321 01567777653221111111111 1112333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+....+ .-++++++|++++..+|||+...+ .+|+.-++-|
T Consensus 100 ~d~~~l--~~~~~~~fD~V~~~~vl~~~~~~~--------------------------------------~~l~~~~~~L 139 (255)
T PRK11036 100 CAAQDI--AQHLETPVDLILFHAVLEWVADPK--------------------------------------SVLQTLWSVL 139 (255)
T ss_pred cCHHHH--hhhcCCCCCEEEehhHHHhhCCHH--------------------------------------HHHHHHHHHc
Confidence 332111 014678999999999999986432 3566667889
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHH-HHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYG-FLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~-~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
+|||++++.+...... .+. .+..-+ +.+..|+...+.. .-.|-+..+++++.+++++.| |+++..
T Consensus 140 kpgG~l~i~~~n~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~--~~~p~~~~~~~~l~~~l~~aG-f~~~~~ 205 (255)
T PRK11036 140 RPGGALSLMFYNANGL----------LMHNMVAGNF-DYVQAGMPKRKKR--TLSPDYPLDPEQVYQWLEEAG-WQIMGK 205 (255)
T ss_pred CCCeEEEEEEECccHH----------HHHHHHccCh-HHHHhcCcccccc--CCCCCCCCCHHHHHHHHHHCC-CeEeee
Confidence 9999999887664321 111 111001 1122233221111 123556779999999999999 988754
Q ss_pred E
Q 017363 297 D 297 (373)
Q Consensus 297 e 297 (373)
.
T Consensus 206 ~ 206 (255)
T PRK11036 206 T 206 (255)
T ss_pred e
Confidence 4
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.5e-07 Score=87.70 Aligned_cols=160 Identities=18% Similarity=0.184 Sum_probs=89.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CC---CC-cccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MP---PS-RKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~---~~-~~~f~ 136 (373)
...+|+|+|||+|.+++.+...+ ..|..+++.-|....- -...+. +. .. +--|.
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~~~~--------------------~~~~~~v~gvD~S~~m-l~~A~~~~~~~~~~~~v~~~ 114 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVRRNI--------------------HHDNCKIIAIDNSPAM-IERCRRHIDAYKAPTPVDVI 114 (247)
T ss_pred CCCEEEEEcccCCHHHHHHHHhc--------------------CCCCCeEEEEeCCHHH-HHHHHHHHHhcCCCCCeEEE
Confidence 34689999999999887763221 0123366777764322 212211 11 11 11122
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+++.+- |....|+++++.++||++. + +...+|+.-++-
T Consensus 115 ---~~d~~~~--~~~~~D~vv~~~~l~~l~~-~-----------------------------------~~~~~l~~i~~~ 153 (247)
T PRK15451 115 ---EGDIRDI--AIENASMVVLNFTLQFLEP-S-----------------------------------ERQALLDKIYQG 153 (247)
T ss_pred ---eCChhhC--CCCCCCEEehhhHHHhCCH-H-----------------------------------HHHHHHHHHHHh
Confidence 2333332 3345899999999999862 1 223677888899
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhccc----CcccccCCHHHHHHHHHhcCceE
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSF----NIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f----~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
|+|||.|++.-.-..+... ..+.+...|..+....-.+++++..+ .--...-|+++..+++++.| |+
T Consensus 154 LkpGG~l~l~e~~~~~~~~--------~~~~~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~~~~~~~L~~aG-F~ 224 (247)
T PRK15451 154 LNPGGALVLSEKFSFEDAK--------VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-FE 224 (247)
T ss_pred cCCCCEEEEEEecCCCcch--------hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHcC-ch
Confidence 9999999997533322211 12334444555544444455444332 11112247888888888888 63
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.8e-07 Score=81.99 Aligned_cols=135 Identities=19% Similarity=0.238 Sum_probs=79.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-C--CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-P--PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~--~~~~~f~~gv 139 (373)
..+|+|+|||+|.+++.+.+. -.+|..-|+..+- -...+.. . .... +..+
T Consensus 31 ~~~vLDiGcG~G~~a~~La~~------------------------g~~V~gvD~S~~~-i~~a~~~~~~~~~~~--v~~~ 83 (197)
T PRK11207 31 PGKTLDLGCGNGRNSLYLAAN------------------------GFDVTAWDKNPMS-IANLERIKAAENLDN--LHTA 83 (197)
T ss_pred CCcEEEECCCCCHHHHHHHHC------------------------CCEEEEEeCCHHH-HHHHHHHHHHcCCCc--ceEE
Confidence 468999999999999887421 0145555664321 1111110 0 0011 1111
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
.+++.. +-+++++|+++|+.++||+.. .|...+++.-++-|+|
T Consensus 84 ~~d~~~-~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~i~~~Lkp 126 (197)
T PRK11207 84 VVDLNN-LTFDGEYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKP 126 (197)
T ss_pred ecChhh-CCcCCCcCEEEEecchhhCCH------------------------------------HHHHHHHHHHHHHcCC
Confidence 122222 122467999999999999752 1445788888899999
Q ss_pred CCeEEE-EeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 220 GGLIVF-VLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 220 GG~lvl-~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
||++++ ..+..++. +. ..| |-+..+.+|+.+.++ | |++.+.+
T Consensus 127 gG~~~~~~~~~~~~~-~~--------------------~~~------------~~~~~~~~el~~~~~--~-~~~~~~~ 169 (197)
T PRK11207 127 GGYNLIVAAMDTADY-PC--------------------TVG------------FPFAFKEGELRRYYE--G-WEMVKYN 169 (197)
T ss_pred CcEEEEEEEecCCCC-CC--------------------CCC------------CCCccCHHHHHHHhC--C-CeEEEee
Confidence 999655 44433221 10 011 226678999999887 5 8877664
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.1e-08 Score=76.75 Aligned_cols=95 Identities=25% Similarity=0.262 Sum_probs=61.8
Q ss_pred eeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccC
Q 017363 67 ADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGR 146 (373)
Q Consensus 67 aD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~r 146 (373)
+|+|||+|.++..+.+. +..+++-.|....--...-+.......-|..+ ++..-
T Consensus 1 LdiG~G~G~~~~~l~~~-----------------------~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~---d~~~l 54 (95)
T PF08241_consen 1 LDIGCGTGRFAAALAKR-----------------------GGASVTGIDISEEMLEQARKRLKNEGVSFRQG---DAEDL 54 (95)
T ss_dssp EEET-TTSHHHHHHHHT-----------------------TTCEEEEEES-HHHHHHHHHHTTTSTEEEEES---BTTSS
T ss_pred CEecCcCCHHHHHHHhc-----------------------cCCEEEEEeCCHHHHHHHHhcccccCchheee---hHHhC
Confidence 69999999999888332 01267777765432222222222222224443 45566
Q ss_pred CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 147 LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 147 lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
-||++|+|+++++.++||+. |...+|+.-++-|||||++++
T Consensus 55 ~~~~~sfD~v~~~~~~~~~~--------------------------------------~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 55 PFPDNSFDVVFSNSVLHHLE--------------------------------------DPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp SS-TT-EEEEEEESHGGGSS--------------------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccccccccceeecc--------------------------------------CHHHHHHHHHHHcCcCeEEeC
Confidence 78999999999999999982 455788889999999999985
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=98.57 E-value=3e-08 Score=93.59 Aligned_cols=165 Identities=22% Similarity=0.294 Sum_probs=66.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~g 138 (373)
...+|+|+|||+|..|+.+...+ .+..+|+--|...+--..-=+.+. ..+--|+.|
T Consensus 47 ~g~~vLDv~~GtG~~~~~l~~~~---------------------~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~ 105 (233)
T PF01209_consen 47 PGDRVLDVACGTGDVTRELARRV---------------------GPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQG 105 (233)
T ss_dssp S--EEEEET-TTSHHHHHHGGGS---------------------S---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-
T ss_pred CCCEEEEeCCChHHHHHHHHHHC---------------------CCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEc
Confidence 45799999999999988772211 233477888876543222111111 112336666
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+. ..--||++|+|.+++++.||-+.+ ..+.|+.-.+=||
T Consensus 106 da---~~lp~~d~sfD~v~~~fglrn~~d--------------------------------------~~~~l~E~~RVLk 144 (233)
T PF01209_consen 106 DA---EDLPFPDNSFDAVTCSFGLRNFPD--------------------------------------RERALREMYRVLK 144 (233)
T ss_dssp BT---TB--S-TT-EEEEEEES-GGG-SS--------------------------------------HHHHHHHHHHHEE
T ss_pred CH---HHhcCCCCceeEEEHHhhHHhhCC--------------------------------------HHHHHHHHHHHcC
Confidence 55 344479999999999999998653 3356677778999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhccc----CcccccCCHHHHHHHHHhcCceEEe
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSF----NIPLYFPTAEELKAIIERNGCFRIE 294 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f----~~P~y~ps~eE~~~~ie~~gsF~I~ 294 (373)
|||++++.=+++++.... ..+|...-..+.=+.. .+++.+ .+.+ ..-.-+|+.+|+.+.+++.| |+..
T Consensus 145 PGG~l~ile~~~p~~~~~-----~~~~~~y~~~ilP~~g-~l~~~~-~~~Y~yL~~Si~~f~~~~~~~~~l~~~G-f~~v 216 (233)
T PF01209_consen 145 PGGRLVILEFSKPRNPLL-----RALYKFYFKYILPLIG-RLLSGD-REAYRYLPESIRRFPSPEELKELLEEAG-FKNV 216 (233)
T ss_dssp EEEEEEEEEEEB-SSHHH-----HHHHHH---------------------------------------------------
T ss_pred CCeEEEEeeccCCCCchh-----hceeeeeecccccccc-cccccc-cccccccccccccccccccccccccccc-cccc
Confidence 999999988888754221 1122221111111111 222222 1111 11224689999999999999 8744
Q ss_pred EE
Q 017363 295 RM 296 (373)
Q Consensus 295 ~l 296 (373)
+.
T Consensus 217 ~~ 218 (233)
T PF01209_consen 217 EY 218 (233)
T ss_dssp --
T ss_pred cc
Confidence 33
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-06 Score=81.66 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=59.2
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++++|+++|..++||+. |+..+|+.-++-|+|||++++.-..
T Consensus 65 ~~~fD~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~LkpgG~l~i~~~~ 106 (224)
T smart00828 65 PDTYDLVFGFEVIHHIK--------------------------------------DKMDLFSNISRHLKDGGHLVLADFI 106 (224)
T ss_pred CCCCCEeehHHHHHhCC--------------------------------------CHHHHHHHHHHHcCCCCEEEEEEcc
Confidence 35899999999999964 3447888888999999999987654
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
.+..... + .-..+.|.++.+|+...+++.| |++...+.+
T Consensus 107 ~~~~~~~----------------------~--------~~~~~~~~~s~~~~~~~l~~~G-f~~~~~~~~ 145 (224)
T smart00828 107 ANLLSAI----------------------E--------HEETTSYLVTREEWAELLARNN-LRVVEGVDA 145 (224)
T ss_pred cccCccc----------------------c--------ccccccccCCHHHHHHHHHHCC-CeEEEeEEC
Confidence 3211000 0 0012346899999999999999 998777655
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.4e-07 Score=83.41 Aligned_cols=167 Identities=23% Similarity=0.271 Sum_probs=93.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC----Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP----SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~----~~~~f~~g 138 (373)
..+|+|+|||+|..+..+.... ++..+++..|+..+-....=+.+.. .+.-|..
T Consensus 52 ~~~vldiG~G~G~~~~~l~~~~---------------------~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~- 109 (239)
T PRK00216 52 GDKVLDLACGTGDLAIALAKAV---------------------GKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ- 109 (239)
T ss_pred CCeEEEeCCCCCHHHHHHHHHc---------------------CCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe-
Confidence 4799999999999888763322 0123677888754322211111111 1112322
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+++.+..++++++|+++++.++|++++. ..+|+...+-|+
T Consensus 110 --~d~~~~~~~~~~~D~I~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~ 149 (239)
T PRK00216 110 --GDAEALPFPDNSFDAVTIAFGLRNVPDI--------------------------------------DKALREMYRVLK 149 (239)
T ss_pred --cccccCCCCCCCccEEEEecccccCCCH--------------------------------------HHHHHHHHHhcc
Confidence 3344445677899999999999987643 256777788999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHH-HH---HHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEe
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGS-CL---IDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIE 294 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~-al---~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~ 294 (373)
|||++++.-...++... ....++.... .+ ..+........+.+. ..-..+++.+++..++++.| |++.
T Consensus 150 ~gG~li~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aG-f~~~ 221 (239)
T PRK00216 150 PGGRLVILEFSKPTNPP-----LKKAYDFYLFKVLPLIGKLISKNAEAYSYLA--ESIRAFPDQEELAAMLEEAG-FERV 221 (239)
T ss_pred CCcEEEEEEecCCCchH-----HHHHHHHHHHhhhHHHHHHHcCCcHHHHHHH--HHHHhCCCHHHHHHHHHhCC-Ccee
Confidence 99999887665443211 0111111100 00 111111110000000 00024579999999999999 9877
Q ss_pred EEEEe
Q 017363 295 RMDKL 299 (373)
Q Consensus 295 ~le~~ 299 (373)
+.+.+
T Consensus 222 ~~~~~ 226 (239)
T PRK00216 222 RYRNL 226 (239)
T ss_pred eeeee
Confidence 76654
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.3e-06 Score=83.37 Aligned_cols=145 Identities=12% Similarity=0.204 Sum_probs=88.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..++.+.+. + ..+|+--|+..+-....=+......--+..+ .
T Consensus 168 g~rVLDIGcG~G~~a~~la~~--------~---------------g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~---D 221 (383)
T PRK11705 168 GMRVLDIGCGWGGLARYAAEH--------Y---------------GVSVVGVTISAEQQKLAQERCAGLPVEIRLQ---D 221 (383)
T ss_pred CCEEEEeCCCccHHHHHHHHH--------C---------------CCEEEEEeCCHHHHHHHHHHhccCeEEEEEC---c
Confidence 469999999999988766321 1 1145555664322221111111111112222 2
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCe
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 222 (373)
+ ..+ ++++|.++|...++|+.. +++..+|+.-.+-|+|||+
T Consensus 222 ~-~~l--~~~fD~Ivs~~~~ehvg~------------------------------------~~~~~~l~~i~r~LkpGG~ 262 (383)
T PRK11705 222 Y-RDL--NGQFDRIVSVGMFEHVGP------------------------------------KNYRTYFEVVRRCLKPDGL 262 (383)
T ss_pred h-hhc--CCCCCEEEEeCchhhCCh------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 1 222 478999999999988531 1445688888899999999
Q ss_pred EEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 223 lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
+++...+.+...... ..-.+.+.+|- +.|+.+++....+ .| |+|..++.+
T Consensus 263 lvl~~i~~~~~~~~~-------------------------~~~i~~yifp~g~lps~~~i~~~~~-~~-~~v~d~~~~ 313 (383)
T PRK11705 263 FLLHTIGSNKTDTNV-------------------------DPWINKYIFPNGCLPSVRQIAQASE-GL-FVMEDWHNF 313 (383)
T ss_pred EEEEEccCCCCCCCC-------------------------CCCceeeecCCCcCCCHHHHHHHHH-CC-cEEEEEecC
Confidence 999988766432110 01123344553 6899999999877 35 988877744
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.9e-06 Score=78.85 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=92.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC-CCccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP-PSRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~-~~~~~f~~gvp 140 (373)
...+|+|+|||+|..+..+.... +...+++.-|....-....=+.++ ..+--|..
T Consensus 39 ~~~~vldiG~G~G~~~~~~~~~~---------------------~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~--- 94 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELAKSA---------------------PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQ--- 94 (223)
T ss_pred CCCeEEEeCCCCChhHHHHHHhc---------------------CCCceEEEEECCHHHHHHHHHHhccCCCceEEe---
Confidence 45799999999999888763222 011356777764221111111111 01112222
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+++.+..++++++|+++++..+|+... ...+|+...+.|+||
T Consensus 95 ~d~~~~~~~~~~~D~i~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~g 136 (223)
T TIGR01934 95 ADAEALPFEDNSFDAVTIAFGLRNVTD--------------------------------------IQKALREMYRVLKPG 136 (223)
T ss_pred cchhcCCCCCCcEEEEEEeeeeCCccc--------------------------------------HHHHHHHHHHHcCCC
Confidence 334454577889999999999998652 336788888999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHH-Hh---hcCCCChhhhcccCc----ccccCCHHHHHHHHHhcCceE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLID-MT---TKGLIDEEKVDSFNI----PLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~-mv---~eGli~~e~~d~f~~----P~y~ps~eE~~~~ie~~gsF~ 292 (373)
|++++.-.......+ +..+.+.+.. |. ..+. .. ..+.+.. ...+++.+|++.++++.| |+
T Consensus 137 G~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~ 204 (223)
T TIGR01934 137 GRLVILEFSKPANAL---------LKKFYKFYLKNVLPSIGGLI-SK-NAEAYTYLPESIRAFPSQEELAAMLKEAG-FE 204 (223)
T ss_pred cEEEEEEecCCCchh---------hHHHHHHHHHHhhhhhhhhh-cC-CchhhHHHHHHHHhCCCHHHHHHHHHHcC-Cc
Confidence 999986654332211 1222222111 11 1111 10 0111110 113578999999999999 98
Q ss_pred EeEEEEe
Q 017363 293 IERMDKL 299 (373)
Q Consensus 293 I~~le~~ 299 (373)
+...+..
T Consensus 205 ~~~~~~~ 211 (223)
T TIGR01934 205 EVRYRSL 211 (223)
T ss_pred cceeeee
Confidence 7766643
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.6e-07 Score=87.82 Aligned_cols=144 Identities=18% Similarity=0.241 Sum_probs=88.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-CCCccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-PPSRKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~~~~~~f~~gvpg 141 (373)
..+|+|+|||+|..++.+.+.. +..++...|+..+-.. ..+.. +..+--+ +.+
T Consensus 114 ~~~VLDLGcGtG~~~l~La~~~----------------------~~~~VtgVD~S~~mL~-~A~~k~~~~~i~~---i~g 167 (340)
T PLN02490 114 NLKVVDVGGGTGFTTLGIVKHV----------------------DAKNVTILDQSPHQLA-KAKQKEPLKECKI---IEG 167 (340)
T ss_pred CCEEEEEecCCcHHHHHHHHHC----------------------CCCEEEEEECCHHHHH-HHHHhhhccCCeE---Eec
Confidence 4799999999999887663221 1126777777543322 22221 1111123 333
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+....-+|++++|+++++.++|++... ...|+.-.+-|+|||
T Consensus 168 D~e~lp~~~~sFDvVIs~~~L~~~~d~--------------------------------------~~~L~e~~rvLkPGG 209 (340)
T PLN02490 168 DAEDLPFPTDYADRYVSAGSIEYWPDP--------------------------------------QRGIKEAYRVLKIGG 209 (340)
T ss_pred cHHhCCCCCCceeEEEEcChhhhCCCH--------------------------------------HHHHHHHHHhcCCCc
Confidence 344444688999999999999985532 246777789999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
++++.-....+. | +..-+.+ .-..+++.+|+.+++++.| |+...++.+.
T Consensus 210 ~LvIi~~~~p~~-----------~--~~r~~~~----------------~~~~~~t~eEl~~lL~~aG-F~~V~i~~i~ 258 (340)
T PLN02490 210 KACLIGPVHPTF-----------W--LSRFFAD----------------VWMLFPKEEEYIEWFTKAG-FKDVKLKRIG 258 (340)
T ss_pred EEEEEEecCcch-----------h--HHHHhhh----------------hhccCCCHHHHHHHHHHCC-CeEEEEEEcC
Confidence 998763321110 0 0000000 0113579999999999999 9877766543
|
|
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.8e-07 Score=92.41 Aligned_cols=152 Identities=16% Similarity=0.139 Sum_probs=90.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~g 138 (373)
..+|+|+|||+|..+..+.. . ..+|+--|.-..-....-+.. +. .+-.|..+
T Consensus 132 g~~ILDIGCG~G~~s~~La~--------~----------------g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~ 187 (322)
T PLN02396 132 GLKFIDIGCGGGLLSEPLAR--------M----------------GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCT 187 (322)
T ss_pred CCEEEEeeCCCCHHHHHHHH--------c----------------CCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEec
Confidence 46999999999998876521 0 125666666543222111111 00 11123333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
++.+--++++++|++++..+|||+... ..||+.-++-||
T Consensus 188 ---dae~l~~~~~~FD~Vi~~~vLeHv~d~--------------------------------------~~~L~~l~r~Lk 226 (322)
T PLN02396 188 ---TAEKLADEGRKFDAVLSLEVIEHVANP--------------------------------------AEFCKSLSALTI 226 (322)
T ss_pred ---CHHHhhhccCCCCEEEEhhHHHhcCCH--------------------------------------HHHHHHHHHHcC
Confidence 233323567899999999999997643 368888889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHH-HHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFL-GSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l-~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|||++++....+... .+....+ ..-+...+..|. -....+.+++|+..+++..| |++..+.
T Consensus 227 PGG~liist~nr~~~--------~~~~~i~~~eyi~~~lp~gt---------h~~~~f~tp~eL~~lL~~aG-f~i~~~~ 288 (322)
T PLN02396 227 PNGATVLSTINRTMR--------AYASTIVGAEYILRWLPKGT---------HQWSSFVTPEELSMILQRAS-VDVKEMA 288 (322)
T ss_pred CCcEEEEEECCcCHH--------HHHHhhhhHHHHHhcCCCCC---------cCccCCCCHHHHHHHHHHcC-CeEEEEe
Confidence 999999998765321 0000000 011111122221 01123679999999999999 9888776
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.9e-07 Score=74.12 Aligned_cols=94 Identities=17% Similarity=0.282 Sum_probs=64.5
Q ss_pred eEEeeecCCCCcccHHHHH--------------HHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC
Q 017363 64 FKLADFGCSVGPNTFIAVQ--------------NIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP 129 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~--------------~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~ 129 (373)
-+|+|+|||+|..++.+.+ ..++..+++..... ..+.++++..|+ ..++.
T Consensus 3 ~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--------~~~~i~~~~~d~-~~~~~------- 66 (112)
T PF12847_consen 3 GRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEG--------LSDRITFVQGDA-EFDPD------- 66 (112)
T ss_dssp CEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTT--------TTTTEEEEESCC-HGGTT-------
T ss_pred CEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--------CCCCeEEEECcc-ccCcc-------
Confidence 5899999999999999976 56666666552221 234556666666 11111
Q ss_pred CCccceeeccCcccccCCCCCCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHH
Q 017363 130 PSRKYFAFGVPGSFHGRLFPKSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEA 208 (373)
Q Consensus 130 ~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~ 208 (373)
....+|+++++. ++|++-.. .+...
T Consensus 67 -------------------~~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~~ 92 (112)
T PF12847_consen 67 -------------------FLEPFDLVICSGFTLHFLLPL-----------------------------------DERRR 92 (112)
T ss_dssp -------------------TSSCEEEEEECSGSGGGCCHH-----------------------------------HHHHH
T ss_pred -------------------cCCCCCEEEECCCccccccch-----------------------------------hHHHH
Confidence 113399999999 77754322 25567
Q ss_pred HHHHHHhhhccCCeEEEEe
Q 017363 209 FLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~ 227 (373)
+|+.-.+-|+|||+|++..
T Consensus 93 ~l~~~~~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 93 VLERIRRLLKPGGRLVINT 111 (112)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEE
Confidence 8999999999999999864
|
... |
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.5e-06 Score=78.11 Aligned_cols=162 Identities=17% Similarity=0.160 Sum_probs=87.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-Cccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gv 139 (373)
.+..+|+|+|||+|.++..+.... ++ . .+..+++-.|+..+- -...+.... .+--+..+.
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~~~~----~~----~----------g~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~ 119 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLARWA----RR----D----------GLRLEVTAIDPDPRA-VAFARANPRRPGVTFRQAV 119 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHHHHH----Hh----C----------CCCcEEEEEcCCHHH-HHHHHhccccCCCeEEEEe
Confidence 346799999999999888663322 11 1 233478888886533 223333211 111233332
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
...+ -++++++|+++|+.+|||+... ++..+|+.-++-++
T Consensus 120 ~~~l---~~~~~~fD~V~~~~~lhh~~d~------------------------------------~~~~~l~~~~r~~~- 159 (232)
T PRK06202 120 SDEL---VAEGERFDVVTSNHFLHHLDDA------------------------------------EVVRLLADSAALAR- 159 (232)
T ss_pred cccc---cccCCCccEEEECCeeecCChH------------------------------------HHHHHHHHHHHhcC-
Confidence 2221 1267899999999999998631 22345655555555
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|.+++.-+.++.. .+........-......+..+. ...-.-++|.+|+.+.+++ | |++...-
T Consensus 160 -~~~~i~dl~~~~~----------~~~~~~~~~~~~~~~~~~~~d~---~~s~~~~~~~~el~~ll~~-G-f~~~~~~ 221 (232)
T PRK06202 160 -RLVLHNDLIRSRL----------AYALFWAGTRLLSRSSFVHTDG---LLSVRRSYTPAELAALAPQ-G-WRVERQW 221 (232)
T ss_pred -eeEEEeccccCHH----------HHHHHHHHHHHhccCceeeccc---hHHHHhhcCHHHHHHHhhC-C-CeEEecc
Confidence 5666665555421 1111111101111111222211 1122357899999999998 7 9887654
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-06 Score=82.05 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=85.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc----CCCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT----MPPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~----l~~~~~~f~~ 137 (373)
..-+|+|+|||+|..++.+.... . +.-+|+--|...+-.. ..+. ..-.+--|..
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a~~~--------g-------------~~~~v~gvD~s~~~l~-~A~~~~~~~g~~~v~~~~ 134 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAARRV--------G-------------PTGKVIGVDMTPEMLA-KARANARKAGYTNVEFRL 134 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------C-------------CCCEEEEECCCHHHHH-HHHHHHHHcCCCCEEEEE
Confidence 34699999999998776552211 1 1125777776432211 1111 1101112333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.+..--+|++++|+++|+.++||.... ...|+.-.+-|
T Consensus 135 ---~d~~~l~~~~~~fD~Vi~~~v~~~~~d~--------------------------------------~~~l~~~~r~L 173 (272)
T PRK11873 135 ---GEIEALPVADNSVDVIISNCVINLSPDK--------------------------------------ERVFKEAFRVL 173 (272)
T ss_pred ---cchhhCCCCCCceeEEEEcCcccCCCCH--------------------------------------HHHHHHHHHHc
Confidence 3333334678899999999999995432 24556666889
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||+|++.-.......+ +.+...+. +.. |.+ ....+.+|+..+++..| |....+.
T Consensus 174 kpGG~l~i~~~~~~~~~~----------~~~~~~~~-~~~-~~~-----------~~~~~~~e~~~~l~~aG-f~~v~i~ 229 (272)
T PRK11873 174 KPGGRFAISDVVLRGELP----------EEIRNDAE-LYA-GCV-----------AGALQEEEYLAMLAEAG-FVDITIQ 229 (272)
T ss_pred CCCcEEEEEEeeccCCCC----------HHHHHhHH-HHh-ccc-----------cCCCCHHHHHHHHHHCC-CCceEEE
Confidence 999999987554322111 11222111 111 211 13457899999999999 8766554
Q ss_pred E
Q 017363 298 K 298 (373)
Q Consensus 298 ~ 298 (373)
.
T Consensus 230 ~ 230 (272)
T PRK11873 230 P 230 (272)
T ss_pred e
Confidence 3
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.2e-05 Score=75.89 Aligned_cols=92 Identities=20% Similarity=0.311 Sum_probs=59.0
Q ss_pred hcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHH
Q 017363 204 NDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELK 282 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~ 282 (373)
+++..|++.-++-|+|||++++...+..+.... .+.-.+.+-+....+|- +.|+.+|+.
T Consensus 143 ~~~~~~f~~~~~~LkpgG~~~lq~i~~~~~~~~--------------------~~~~~~~~~i~kyiFPgg~lps~~~~~ 202 (273)
T PF02353_consen 143 KNYPAFFRKISRLLKPGGRLVLQTITHRDPPYH--------------------AERRSSSDFIRKYIFPGGYLPSLSEIL 202 (273)
T ss_dssp GGHHHHHHHHHHHSETTEEEEEEEEEE--HHHH--------------------HCTTCCCHHHHHHTSTTS---BHHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEecccccccch--------------------hhcCCCceEEEEeeCCCCCCCCHHHHH
Confidence 367789999999999999999998876543210 00000001122233343 678999999
Q ss_pred HHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHhhhhHHH
Q 017363 283 AIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAVFEGVVK 327 (373)
Q Consensus 283 ~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~ 327 (373)
..++..| |+|.+.+.+ +..++.++|+|.+.+.+
T Consensus 203 ~~~~~~~-l~v~~~~~~-----------~~hY~~Tl~~W~~~f~~ 235 (273)
T PF02353_consen 203 RAAEDAG-LEVEDVENL-----------GRHYARTLRAWRENFDA 235 (273)
T ss_dssp HHHHHTT--EEEEEEE------------HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-EEEEEEEEc-----------CcCHHHHHHHHHHHHHH
Confidence 9888888 999887754 56788888888877775
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.5e-06 Score=77.18 Aligned_cols=135 Identities=15% Similarity=0.136 Sum_probs=79.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
+.+|+|+|||+|.+++.+... -.+|+--|+..+--. ..+... .-+-.+..+.
T Consensus 31 ~~~vLDiGcG~G~~a~~la~~------------------------g~~V~~iD~s~~~l~-~a~~~~~~~~~~v~~~~~d 85 (195)
T TIGR00477 31 PCKTLDLGCGQGRNSLYLSLA------------------------GYDVRAWDHNPASIA-SVLDMKARENLPLRTDAYD 85 (195)
T ss_pred CCcEEEeCCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHH-HHHHHHHHhCCCceeEecc
Confidence 469999999999999988421 015666666432111 111110 0011111111
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. ...-+++++|+++|+.++||++. .++..+++.-++-|+|
T Consensus 86 ~----~~~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkp 125 (195)
T TIGR00477 86 I----NAAALNEDYDFIFSTVVFMFLQA------------------------------------GRVPEIIANMQAHTRP 125 (195)
T ss_pred c----hhccccCCCCEEEEecccccCCH------------------------------------HHHHHHHHHHHHHhCC
Confidence 1 11122468999999999999752 1445788888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
||++++...-..+..+ .|. .|-|..+++|+++.++ + |++.+.+
T Consensus 126 gG~lli~~~~~~~~~~----------------------~~~----------~~~~~~~~~el~~~f~--~-~~~~~~~ 168 (195)
T TIGR00477 126 GGYNLIVAAMDTADYP----------------------CHM----------PFSFTFKEDELRQYYA--D-WELLKYN 168 (195)
T ss_pred CcEEEEEEecccCCCC----------------------CCC----------CcCccCCHHHHHHHhC--C-CeEEEee
Confidence 9996654432221111 010 1125678999999886 3 8877666
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.8e-06 Score=82.42 Aligned_cols=76 Identities=20% Similarity=0.310 Sum_probs=54.1
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++++|+++|+.+||++.. .++..+|+.-.+-|+|||++++....
T Consensus 182 ~~~fD~I~~~~vl~~l~~------------------------------------~~~~~~l~~~~~~LkpgG~~l~v~~~ 225 (287)
T PRK12335 182 QEEYDFILSTVVLMFLNR------------------------------------ERIPAIIKNMQEHTNPGGYNLIVCAM 225 (287)
T ss_pred cCCccEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 678999999999999751 14557888889999999997775543
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcc-cccCCHHHHHHHHHhcCceEEeEEE
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIP-LYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P-~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
..+..+ ...| -+..+.+|+++.+.. |+|.+.+
T Consensus 226 ~~~~~~---------------------------------~~~p~~~~~~~~el~~~~~~---~~i~~~~ 258 (287)
T PRK12335 226 DTEDYP---------------------------------CPMPFSFTFKEGELKDYYQD---WEIVKYN 258 (287)
T ss_pred ccccCC---------------------------------CCCCCCcccCHHHHHHHhCC---CEEEEEe
Confidence 222111 0112 356789999998863 8888774
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-07 Score=73.06 Aligned_cols=96 Identities=19% Similarity=0.158 Sum_probs=49.2
Q ss_pred eeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCCCccceeeccCccc
Q 017363 67 ADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPPSRKYFAFGVPGSF 143 (373)
Q Consensus 67 aD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~~~~~f~~gvpgSF 143 (373)
+|+|||+|..+..+++.. |..+++..|....-.... +........-.........
T Consensus 1 LdiGcG~G~~~~~l~~~~----------------------~~~~~~~~D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 58 (99)
T PF08242_consen 1 LDIGCGTGRLLRALLEEL----------------------PDARYTGVDISPSMLERARERLAELGNDNFERLRFDVLDL 58 (99)
T ss_dssp -EESTTTS-TTTTHHHHC-----------------------EEEEEEEESSSSTTSTTCCCHHHCT---EEEEE--SSS-
T ss_pred CEeCccChHHHHHHHHhC----------------------CCCEEEEEECCHHHHHHHHHHhhhcCCcceeEEEeecCCh
Confidence 699999999999884433 245788888876443111 1111111112233332222
Q ss_pred ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeE
Q 017363 144 HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLI 223 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 223 (373)
.... +++++|+|+++.+|||+. |+..+|+.-++-|+|||+|
T Consensus 59 ~~~~-~~~~fD~V~~~~vl~~l~--------------------------------------~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 59 FDYD-PPESFDLVVASNVLHHLE--------------------------------------DIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp --CC-C----SEEEEE-TTS--S---------------------------------------HHHHHHHHTTT-TSS-EE
T ss_pred hhcc-cccccceehhhhhHhhhh--------------------------------------hHHHHHHHHHHHcCCCCCC
Confidence 2222 227999999999999982 5557888889999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.6e-06 Score=75.75 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=71.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCc---hhhHhhcCCCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGND---FNTLFQTMPPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~ND---Fn~lf~~l~~~~~~f~~g 138 (373)
+..+|+|+|||+|..++.+.... .+..+++.-|+-..- -+..++.+...+--|..+
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~~~---------------------~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~ 61 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAKEL---------------------NPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQG 61 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHHHS---------------------TTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEES
T ss_pred CCCEEEEecCcCcHHHHHHHHhc---------------------CCCCEEEEEECcHHHHHHhhcccccccccccceEEe
Confidence 46899999999999998884311 112367777775422 233333333333445665
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.-.+ ..+.++ +++|+++++.++||+. |...+|+.-.+-|+
T Consensus 62 d~~~-l~~~~~-~~~D~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~lk 101 (152)
T PF13847_consen 62 DIED-LPQELE-EKFDIIISNGVLHHFP--------------------------------------DPEKVLKNIIRLLK 101 (152)
T ss_dssp BTTC-GCGCSS-TTEEEEEEESTGGGTS--------------------------------------HHHHHHHHHHHHEE
T ss_pred ehhc-cccccC-CCeeEEEEcCchhhcc--------------------------------------CHHHHHHHHHHHcC
Confidence 5544 222245 8999999999999966 34467777789999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
+||++++....
T Consensus 102 ~~G~~i~~~~~ 112 (152)
T PF13847_consen 102 PGGILIISDPN 112 (152)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEECC
Confidence 99999998887
|
... |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00018 Score=69.70 Aligned_cols=182 Identities=18% Similarity=0.200 Sum_probs=109.6
Q ss_pred CceEEeeecCCCCcccHHHHHHH-------------HHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNI-------------IEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM 128 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~i-------------i~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l 128 (373)
.-.+|+|+|||-|..++..+... .+..+++.+..+ -...++|.+-|.+ ||+.
T Consensus 72 ~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~g--------l~~~v~v~l~d~r--d~~e----- 136 (283)
T COG2230 72 PGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARG--------LEDNVEVRLQDYR--DFEE----- 136 (283)
T ss_pred CCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcC--------CCcccEEEecccc--cccc-----
Confidence 35899999999999999987654 222233222221 1124577777764 2221
Q ss_pred CCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHH
Q 017363 129 PPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEA 208 (373)
Q Consensus 129 ~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~ 208 (373)
.+|=++|-=.++.+. .+.+..
T Consensus 137 -----------------------~fDrIvSvgmfEhvg------------------------------------~~~~~~ 157 (283)
T COG2230 137 -----------------------PFDRIVSVGMFEHVG------------------------------------KENYDD 157 (283)
T ss_pred -----------------------ccceeeehhhHHHhC------------------------------------cccHHH
Confidence 156666655555543 235668
Q ss_pred HHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhc
Q 017363 209 FLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERN 288 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~ 288 (373)
|++.-.+-|+|||+|++-..+..+.... .. . .. +. +.|-+. -+.||..++....++.
T Consensus 158 ff~~~~~~L~~~G~~llh~I~~~~~~~~-~~-~----~~----i~-----~yiFPg--------G~lPs~~~i~~~~~~~ 214 (283)
T COG2230 158 FFKKVYALLKPGGRMLLHSITGPDQEFR-RF-P----DF----ID-----KYIFPG--------GELPSISEILELASEA 214 (283)
T ss_pred HHHHHHhhcCCCceEEEEEecCCCcccc-cc-h----HH----HH-----HhCCCC--------CcCCCHHHHHHHHHhc
Confidence 9999999999999999999887654221 00 0 00 01 111111 2779999999999989
Q ss_pred CceEEeEEEEecCCCCCCCCCCHHHHHHhHHHhhhhHHHhhhCh--HHHHHHHH-HHHHHHHhhcccc
Q 017363 289 GCFRIERMDKLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGY--DLVDKIFN-FFTAKFAENFIFG 353 (373)
Q Consensus 289 gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~--~i~delf~-ry~~~~~~~~~~~ 353 (373)
| |.+...+.+ +..++.+++.|.+.+-+ ++.+ .++++-|. +|...+..-...+
T Consensus 215 ~-~~v~~~~~~-----------~~hYa~Tl~~W~~~f~~-~~~~a~~~~~e~~~r~w~~yl~~~~~~F 269 (283)
T COG2230 215 G-FVVLDVESL-----------RPHYARTLRLWRERFEA-NRDEAIALYDERFYRMWELYLAACAAAF 269 (283)
T ss_pred C-cEEehHhhh-----------cHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 8 887665543 34577777777776654 4432 23444443 4555555443333
|
|
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.6e-05 Score=72.51 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=64.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
.-.+.|+|||+|-.++.+... +. +|+-.|..+.- .+.+.+..+.-..-+|-+
T Consensus 34 h~~a~DvG~G~Gqa~~~iae~--------~k----------------~VIatD~s~~m----L~~a~k~~~~~y~~t~~~ 85 (261)
T KOG3010|consen 34 HRLAWDVGTGNGQAARGIAEH--------YK----------------EVIATDVSEAM----LKVAKKHPPVTYCHTPST 85 (261)
T ss_pred cceEEEeccCCCcchHHHHHh--------hh----------------hheeecCCHHH----HHHhhcCCCcccccCCcc
Confidence 348999999999666655222 21 56666665322 222211111111111222
Q ss_pred cc----cCCC-CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 143 FH----GRLF-PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 143 Fy----~rlf-P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+= ..|. +++|||+|.+.-|+||. |+.+|++.-.+-|
T Consensus 86 ms~~~~v~L~g~e~SVDlI~~Aqa~HWF---------------------------------------dle~fy~~~~rvL 126 (261)
T KOG3010|consen 86 MSSDEMVDLLGGEESVDLITAAQAVHWF---------------------------------------DLERFYKEAYRVL 126 (261)
T ss_pred ccccccccccCCCcceeeehhhhhHHhh---------------------------------------chHHHHHHHHHHc
Confidence 21 2233 58999999999999993 6778999999999
Q ss_pred ccCCeEEEEeccCCCC
Q 017363 218 VPGGLIVFVLFSLPNG 233 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~ 233 (373)
++.|-+++...=+++.
T Consensus 127 Rk~Gg~iavW~Y~dd~ 142 (261)
T KOG3010|consen 127 RKDGGLIAVWNYNDDF 142 (261)
T ss_pred CCCCCEEEEEEccCCC
Confidence 9988776666655444
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.5e-05 Score=73.18 Aligned_cols=114 Identities=21% Similarity=0.320 Sum_probs=76.2
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
|-.+|+|+++|+-++||..++|.. .......|||.|.|+.++
T Consensus 133 f~ens~DLiisSlslHW~NdLPg~--------------------------------------m~~ck~~lKPDg~Fiasm 174 (325)
T KOG2940|consen 133 FKENSVDLIISSLSLHWTNDLPGS--------------------------------------MIQCKLALKPDGLFIASM 174 (325)
T ss_pred ccccchhhhhhhhhhhhhccCchH--------------------------------------HHHHHHhcCCCccchhHH
Confidence 567999999999999999999843 234457899999999999
Q ss_pred ccCCCCCCccCCCchhHHH-HHHHHHHHHhhcCCCChhhhcccCcccccC--CHHHHHHHHHhcCceEEeEEEEecCCCC
Q 017363 228 FSLPNGVPMIDSNGGKLYG-FLGSCLIDMTTKGLIDEEKVDSFNIPLYFP--TAEELKAIIERNGCFRIERMDKLPDPPL 304 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~-~l~~al~~mv~eGli~~e~~d~f~~P~y~p--s~eE~~~~ie~~gsF~I~~le~~~~~~~ 304 (373)
+|-+. +++ -++.-|.+|..+|-|+ |..-| ...++-.++.+.| |....+..-+..-.
T Consensus 175 lggdT-----------LyELR~slqLAelER~GGiS---------phiSPf~qvrDiG~LL~rAG-F~m~tvDtDEi~v~ 233 (325)
T KOG2940|consen 175 LGGDT-----------LYELRCSLQLAELEREGGIS---------PHISPFTQVRDIGNLLTRAG-FSMLTVDTDEIVVG 233 (325)
T ss_pred hcccc-----------HHHHHHHhhHHHHHhccCCC---------CCcChhhhhhhhhhHHhhcC-cccceecccceeec
Confidence 98553 233 2344477899999876 33333 4567778888888 86544332211111
Q ss_pred CCCCCCHHHHHHhHHHhhh
Q 017363 305 MRLKPSPESVTSQIRAVFE 323 (373)
Q Consensus 305 ~~~~~~~~~~~~~iRa~~e 323 (373)
+ ...-.+.-.+++..|
T Consensus 234 Y---p~mfeLm~dLq~MgE 249 (325)
T KOG2940|consen 234 Y---PRMFELMEDLQGMGE 249 (325)
T ss_pred C---chHHHHHHHHHhhcc
Confidence 1 012345667777666
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.1e-05 Score=74.18 Aligned_cols=94 Identities=20% Similarity=0.276 Sum_probs=63.0
Q ss_pred CceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC
Q 017363 62 GTFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP 129 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~ 129 (373)
++-+++|+|||.|+||+.+. ...|+.+.+.-... ..+++...-|+-.-
T Consensus 30 ~~g~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~----------~l~i~~~~~Dl~~~---------- 89 (192)
T PF03848_consen 30 KPGKALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQRLAEEE----------GLDIRTRVADLNDF---------- 89 (192)
T ss_dssp -SSEEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHT----------T-TEEEEE-BGCCB----------
T ss_pred CCCcEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhc----------CceeEEEEecchhc----------
Confidence 35799999999999999987 34555554443322 23367777777321
Q ss_pred CCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHH
Q 017363 130 PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAF 209 (373)
Q Consensus 130 ~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~F 209 (373)
-+ ++.+|+++|..++|.|..- .+..+
T Consensus 90 -----------------~~-~~~yD~I~st~v~~fL~~~------------------------------------~~~~i 115 (192)
T PF03848_consen 90 -----------------DF-PEEYDFIVSTVVFMFLQRE------------------------------------LRPQI 115 (192)
T ss_dssp -----------------S--TTTEEEEEEESSGGGS-GG------------------------------------GHHHH
T ss_pred -----------------cc-cCCcCEEEEEEEeccCCHH------------------------------------HHHHH
Confidence 12 3679999999999998721 33467
Q ss_pred HHHHHhhhccCCeEEEEecc
Q 017363 210 LNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 210 L~~Ra~EL~pGG~lvl~~~g 229 (373)
++...+.++|||++++..+-
T Consensus 116 ~~~m~~~~~pGG~~li~~~~ 135 (192)
T PF03848_consen 116 IENMKAATKPGGYNLIVTFM 135 (192)
T ss_dssp HHHHHHTEEEEEEEEEEEEB
T ss_pred HHHHHhhcCCcEEEEEEEec
Confidence 78888999999998886553
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00011 Score=67.85 Aligned_cols=94 Identities=19% Similarity=0.293 Sum_probs=56.8
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++++|+++++.++|+.. |...+|+.-.+-|+|||.+++....
T Consensus 110 ~~~~D~i~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~gG~l~i~~~~ 151 (224)
T TIGR01983 110 AKSFDVVTCMEVLEHVP--------------------------------------DPQAFIRACAQLLKPGGILFFSTIN 151 (224)
T ss_pred CCCccEEEehhHHHhCC--------------------------------------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 47899999999988854 2336788888889999999887654
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
+... . .+..+.. .++.. +.+.... .....+.+.+++.+++++.| |+|..++-
T Consensus 152 ~~~~--------~-~~~~~~~--~~~~~-~~~~~~~----~~~~~~~~~~~l~~~l~~~G-~~i~~~~~ 203 (224)
T TIGR01983 152 RTPK--------S-YLLAIVG--AEYIL-RIVPKGT----HDWEKFIKPSELTSWLESAG-LRVKDVKG 203 (224)
T ss_pred CCch--------H-HHHHHHh--hhhhh-hcCCCCc----CChhhcCCHHHHHHHHHHcC-Ceeeeeee
Confidence 3211 0 1111100 01111 1111100 00113558999999999998 99987773
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00023 Score=65.96 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=24.6
Q ss_pred cccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 271 IPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 271 ~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
.++++++.+|+..+++..| |++...+.+.
T Consensus 180 ~~~~~~~~~~~~~~l~~~G-f~v~~~~~~~ 208 (219)
T TIGR02021 180 TSAYLHPMTDLERALGELG-WKIVREGLVS 208 (219)
T ss_pred cceEEecHHHHHHHHHHcC-ceeeeeeccc
Confidence 4578899999999999999 9998877553
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.1e-05 Score=72.62 Aligned_cols=149 Identities=14% Similarity=0.192 Sum_probs=87.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCCC---Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMPP---SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~~---~~~~f~~ 137 (373)
+..+|+|+|||+|..++.+.+. -|..+++.-|+|. .-...+ .+.. ..+ +.
T Consensus 149 ~~~~vlDiG~G~G~~~~~~~~~----------------------~p~~~~~~~D~~~--~~~~a~~~~~~~gl~~r--v~ 202 (306)
T TIGR02716 149 GVKKMIDVGGGIGDISAAMLKH----------------------FPELDSTILNLPG--AIDLVNENAAEKGVADR--MR 202 (306)
T ss_pred CCCEEEEeCCchhHHHHHHHHH----------------------CCCCEEEEEecHH--HHHHHHHHHHhCCccce--EE
Confidence 4579999999999888776222 1344677778862 122221 1111 111 34
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
.++|+|+..-+|+ .|+++.+..+|-... .+-..+|+.-++-|
T Consensus 203 ~~~~d~~~~~~~~--~D~v~~~~~lh~~~~------------------------------------~~~~~il~~~~~~L 244 (306)
T TIGR02716 203 GIAVDIYKESYPE--ADAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAM 244 (306)
T ss_pred EEecCccCCCCCC--CCEEEeEhhhhcCCh------------------------------------HHHHHHHHHHHHhc
Confidence 5677888755665 499988888884221 01235788888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRI 293 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I 293 (373)
+|||++++.=...++... ..+..+...+. .-|... .+.-+++.+|+.+++++.| |+.
T Consensus 245 ~pgG~l~i~d~~~~~~~~-------~~~~~~~~~~~---~~~~~~--------~~~~~~~~~e~~~ll~~aG-f~~ 301 (306)
T TIGR02716 245 RSGGRLLILDMVIDDPEN-------PNFDYLSHYIL---GAGMPF--------SVLGFKEQARYKEILESLG-YKD 301 (306)
T ss_pred CCCCEEEEEEeccCCCCC-------chhhHHHHHHH---Hccccc--------ccccCCCHHHHHHHHHHcC-CCe
Confidence 999999887543322211 01222222211 112210 1113556899999999999 863
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.1e-05 Score=71.70 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=23.8
Q ss_pred cccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 273 LYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 273 ~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
..++|.+|+.+++++.| |++.....+.
T Consensus 143 ~~~~s~~~~~~ll~~~G-f~v~~~~~~~ 169 (194)
T TIGR02081 143 IHFCTIADFEDLCGELN-LRILDRAAFD 169 (194)
T ss_pred cccCcHHHHHHHHHHCC-CEEEEEEEec
Confidence 46889999999999999 9998888774
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.3e-05 Score=73.80 Aligned_cols=159 Identities=17% Similarity=0.124 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCce
Q 017363 29 SFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALE 108 (373)
Q Consensus 29 ~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~ 108 (373)
.+|+.+.....|.+-........ .+. ....+|+|+|||+|..+..+.... |.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~VLDiGcGtG~~~~~la~~~----------------------p~ 64 (202)
T PRK00121 13 KGQQRAIEELWPRLSPAPLDWAE--LFG----NDAPIHLEIGFGKGEFLVEMAKAN----------------------PD 64 (202)
T ss_pred cchhhhhcccchhhcCCCCCHHH--HcC----CCCCeEEEEccCCCHHHHHHHHHC----------------------CC
Confidence 34566666666666433222111 121 245799999999999999873321 11
Q ss_pred eEEEecCCCCCchhhHhhcCC---CCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCce
Q 017363 109 FQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSI 185 (373)
Q Consensus 109 ~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I 185 (373)
.+|+-.|.-..--...-+.+. ..+-.|..+..-..+.+.+|++++|.++++.+.+|..... . ++
T Consensus 65 ~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~~~~~p~~~~~~-~----------~~-- 131 (202)
T PRK00121 65 INFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYLNFPDPWPKKRH-H----------KR-- 131 (202)
T ss_pred ccEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEEECCCCCCCccc-c----------cc--
Confidence 256666665432222222111 1111233333201123457889999999998888865321 0 00
Q ss_pred eecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCC
Q 017363 186 ICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGL 260 (373)
Q Consensus 186 ~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGl 260 (373)
+.+...||+.-++-|+|||++++.... .+.+...+..|...|+
T Consensus 132 -----------------~~~~~~~l~~i~~~LkpgG~l~i~~~~---------------~~~~~~~~~~~~~~g~ 174 (202)
T PRK00121 132 -----------------RLVQPEFLALYARKLKPGGEIHFATDW---------------EGYAEYMLEVLSAEGG 174 (202)
T ss_pred -----------------ccCCHHHHHHHHHHcCCCCEEEEEcCC---------------HHHHHHHHHHHHhCcc
Confidence 012346888889999999999987532 1334445556666676
|
|
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.9e-06 Score=87.35 Aligned_cols=116 Identities=22% Similarity=0.121 Sum_probs=70.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|..+..+.. . .|..+++--|+..+--...=+.++. .+-.+..+..
T Consensus 419 g~rVLDIGCGTG~ls~~LA~--------~--------------~P~~kVtGIDIS~~MLe~Ararl~~~g~~ie~I~gDa 476 (677)
T PRK06922 419 GDTIVDVGAGGGVMLDMIEE--------E--------------TEDKRIYGIDISENVIDTLKKKKQNEGRSWNVIKGDA 476 (677)
T ss_pred CCEEEEeCCCCCHHHHHHHH--------h--------------CCCCEEEEEECCHHHHHHHHHHhhhcCCCeEEEEcch
Confidence 46999999999987765522 1 1234677777765322221111111 1112333333
Q ss_pred cccccCCCCCCcceEEEccCccccc-ccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWL-SKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWL-S~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
..+ ...||++++|++++++++||+ +.+|..-. .++ .+|...+|+.-.+-|||
T Consensus 477 ~dL-p~~fedeSFDvVVsn~vLH~L~syIp~~g~-----~f~---------------------~edl~kiLreI~RVLKP 529 (677)
T PRK06922 477 INL-SSSFEKESVDTIVYSSILHELFSYIEYEGK-----KFN---------------------HEVIKKGLQSAYEVLKP 529 (677)
T ss_pred HhC-ccccCCCCEEEEEEchHHHhhhhhcccccc-----ccc---------------------HHHHHHHHHHHHHHcCC
Confidence 221 223788999999999999975 44542110 011 24777899999999999
Q ss_pred CCeEEEEe
Q 017363 220 GGLIVFVL 227 (373)
Q Consensus 220 GG~lvl~~ 227 (373)
||++++.=
T Consensus 530 GGrLII~D 537 (677)
T PRK06922 530 GGRIIIRD 537 (677)
T ss_pred CcEEEEEe
Confidence 99999963
|
|
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.7e-05 Score=73.28 Aligned_cols=76 Identities=26% Similarity=0.390 Sum_probs=53.1
Q ss_pred cHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHH
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAI 284 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ 284 (373)
|...||++-.+-|+|||+|+++...|.=..-. +.+ .+.+.+...|-.|.-.-| -|.+++|+..+
T Consensus 173 dp~~~l~~l~~~lkP~G~lfittinrt~lS~~-----~~i--~~~E~vl~ivp~Gth~~e---------kfi~p~e~~~~ 236 (282)
T KOG1270|consen 173 DPQEFLNCLSALLKPNGRLFITTINRTILSFA-----GTI--FLAEIVLRIVPKGTHTWE---------KFINPEELTSI 236 (282)
T ss_pred CHHHHHHHHHHHhCCCCceEeeehhhhHHHhh-----ccc--cHHHHHHHhcCCCCcCHH---------HcCCHHHHHHH
Confidence 67789999999999999999999877522110 001 122333337777775554 47899999999
Q ss_pred HHhcCceEEeEEE
Q 017363 285 IERNGCFRIERMD 297 (373)
Q Consensus 285 ie~~gsF~I~~le 297 (373)
++.++ +.++.+.
T Consensus 237 l~~~~-~~v~~v~ 248 (282)
T KOG1270|consen 237 LNANG-AQVNDVV 248 (282)
T ss_pred HHhcC-cchhhhh
Confidence 99987 6665544
|
|
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.1e-05 Score=73.98 Aligned_cols=143 Identities=20% Similarity=0.266 Sum_probs=97.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC----CCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP----PSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~----~~~~~f~~ 137 (373)
+--+|+|+||+.|.-++.+. .. + +. .|+--| |+-.|..-|.-+. ....+|..
T Consensus 115 ~gk~VLDIGC~nGY~~frM~--------~~----G----------A~-~ViGiD-P~~lf~~QF~~i~~~lg~~~~~~~l 170 (315)
T PF08003_consen 115 KGKRVLDIGCNNGYYSFRML--------GR----G----------AK-SVIGID-PSPLFYLQFEAIKHFLGQDPPVFEL 170 (315)
T ss_pred CCCEEEEecCCCcHHHHHHh--------hc----C----------CC-EEEEEC-CChHHHHHHHHHHHHhCCCccEEEc
Confidence 34699999999999998772 11 1 11 455555 4445555555442 23334433
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
.++ -+.|-+.+++|+|||.-.|=.++..= ..|+.-..-|
T Consensus 171 plg---vE~Lp~~~~FDtVF~MGVLYHrr~Pl--------------------------------------~~L~~Lk~~L 209 (315)
T PF08003_consen 171 PLG---VEDLPNLGAFDTVFSMGVLYHRRSPL--------------------------------------DHLKQLKDSL 209 (315)
T ss_pred Ccc---hhhccccCCcCEEEEeeehhccCCHH--------------------------------------HHHHHHHHhh
Confidence 221 24555578999999988876655321 3455556789
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
+|||.||+.++..+.... .-+++++.+..|+.-|+.||..-++.+++++| |+
T Consensus 210 ~~gGeLvLETlvi~g~~~----------------------~~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~g-F~ 261 (315)
T PF08003_consen 210 RPGGELVLETLVIDGDEN----------------------TVLVPEDRYAKMRNVWFIPSVAALKNWLERAG-FK 261 (315)
T ss_pred CCCCEEEEEEeeecCCCc----------------------eEEccCCcccCCCceEEeCCHHHHHHHHHHcC-Cc
Confidence 999999999987554321 13567777889999999999999999999999 84
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00021 Score=66.55 Aligned_cols=94 Identities=19% Similarity=0.303 Sum_probs=58.2
Q ss_pred CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEec
Q 017363 149 PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 149 P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+++++|+++++..+++.. |...+|+...+-|+|||+|++...
T Consensus 111 ~~~~fD~Ii~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~gG~l~v~~~ 152 (233)
T PRK05134 111 HPGQFDVVTCMEMLEHVP--------------------------------------DPASFVRACAKLVKPGGLVFFSTL 152 (233)
T ss_pred cCCCccEEEEhhHhhccC--------------------------------------CHHHHHHHHHHHcCCCcEEEEEec
Confidence 557899999998888754 223577788888999999998876
Q ss_pred cCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 229 SLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 229 g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
++... ...+.... .+.+..++-. .......+.+.+|+.+++++.| |++....
T Consensus 153 ~~~~~--------~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~G-f~~v~~~ 204 (233)
T PRK05134 153 NRNLK--------SYLLAIVG---AEYVLRMLPK-----GTHDYKKFIKPSELAAWLRQAG-LEVQDIT 204 (233)
T ss_pred CCChH--------HHHHHHhh---HHHHhhhcCc-----ccCchhhcCCHHHHHHHHHHCC-CeEeeee
Confidence 53211 00111111 1111111110 0011124678999999999999 9887665
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.1e-05 Score=79.17 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=80.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|.+|..+.... . +|+-.|.-..-... -+.... .+-.|..+..
T Consensus 38 ~~~vLDlGcG~G~~~~~la~~~--------~----------------~v~giD~s~~~l~~-a~~~~~~~~~i~~~~~d~ 92 (475)
T PLN02336 38 GKSVLELGAGIGRFTGELAKKA--------G----------------QVIALDFIESVIKK-NESINGHYKNVKFMCADV 92 (475)
T ss_pred CCEEEEeCCCcCHHHHHHHhhC--------C----------------EEEEEeCCHHHHHH-HHHHhccCCceEEEEecc
Confidence 3589999999999999874321 0 45555543221111 011111 1122433333
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
... ..-+|++++|+++|+.++||++.. ++..+|+..++-|+||
T Consensus 93 ~~~-~~~~~~~~fD~I~~~~~l~~l~~~------------------------------------~~~~~l~~~~r~Lk~g 135 (475)
T PLN02336 93 TSP-DLNISDGSVDLIFSNWLLMYLSDK------------------------------------EVENLAERMVKWLKVG 135 (475)
T ss_pred ccc-ccCCCCCCEEEEehhhhHHhCCHH------------------------------------HHHHHHHHHHHhcCCC
Confidence 211 122688999999999999998631 3457888889999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcC
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNG 289 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~g 289 (373)
|+|++.=...... |-+ ..-.-|..+++..+++.++.++|
T Consensus 136 G~l~~~d~~~~~~-------------------------~~~-----~~~~~~~~~~~~~~~~~~f~~~~ 174 (475)
T PLN02336 136 GYIFFRESCFHQS-------------------------GDS-----KRKNNPTHYREPRFYTKVFKECH 174 (475)
T ss_pred eEEEEEeccCCCC-------------------------Ccc-----cccCCCCeecChHHHHHHHHHhe
Confidence 9998752211100 000 00123556788999999998876
|
|
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.3e-05 Score=72.00 Aligned_cols=141 Identities=18% Similarity=0.205 Sum_probs=84.2
Q ss_pred chhHHhhHH---HHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCC
Q 017363 22 YSYAKNSSF---QRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQD 98 (373)
Q Consensus 22 ~sY~~nS~~---Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~ 98 (373)
.-|.+||.+ |..+.+.++.++. ++ .+++--|+|+|||+|--+-.+-+
T Consensus 21 ~kYt~nsri~~IQ~em~eRaLELLa--------lp------~~~~~~iLDIGCGsGLSg~vL~~---------------- 70 (270)
T KOG1541|consen 21 PKYTQNSRIVLIQAEMAERALELLA--------LP------GPKSGLILDIGCGSGLSGSVLSD---------------- 70 (270)
T ss_pred hhccccceeeeehHHHHHHHHHHhh--------CC------CCCCcEEEEeccCCCcchheecc----------------
Confidence 358889876 5666666555543 32 44688999999999976654411
Q ss_pred CcCCCCCCceeEEEecCCCCCchhhHh-hcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCC
Q 017363 99 NHQNSSSALEFQVFFNDHYGNDFNTLF-QTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRS 177 (373)
Q Consensus 99 ~~~~~~~~~~~~v~~nDLp~NDFn~lf-~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~ 177 (373)
+.-+++--|..--.-..-- +.+. .. ++.++=| -+--|+++++|-++|-+|+|||=..-+....
T Consensus 71 --------~Gh~wiGvDiSpsML~~a~~~e~e--gd-lil~DMG--~GlpfrpGtFDg~ISISAvQWLcnA~~s~~~--- 134 (270)
T KOG1541|consen 71 --------SGHQWIGVDISPSMLEQAVERELE--GD-LILCDMG--EGLPFRPGTFDGVISISAVQWLCNADKSLHV--- 134 (270)
T ss_pred --------CCceEEeecCCHHHHHHHHHhhhh--cC-eeeeecC--CCCCCCCCccceEEEeeeeeeecccCccccC---
Confidence 0012333333211000000 0000 01 1111111 2445899999999999999998654322110
Q ss_pred CCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCC
Q 017363 178 PAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPN 232 (373)
Q Consensus 178 ~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~ 232 (373)
=++.+..|+..-..-|++|++-|+.+--..+
T Consensus 135 ------------------------P~~Rl~~FF~tLy~~l~rg~raV~QfYpen~ 165 (270)
T KOG1541|consen 135 ------------------------PKKRLLRFFGTLYSCLKRGARAVLQFYPENE 165 (270)
T ss_pred ------------------------hHHHHHHHhhhhhhhhccCceeEEEecccch
Confidence 1356778999999999999999999865443
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=97.94 E-value=8.5e-05 Score=67.44 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=71.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchh---hHhhcCCCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFN---TLFQTMPPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn---~lf~~l~~~~~~f~~gv 139 (373)
..+|+|+|||+|..|+.+.. .. +..+|+.-|...+--. ...+...-.+--|..+.
T Consensus 43 ~~~vLDiGcGtG~~s~~la~--------~~--------------~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d 100 (181)
T TIGR00138 43 GKKVIDIGSGAGFPGIPLAI--------AR--------------PELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR 100 (181)
T ss_pred CCeEEEecCCCCccHHHHHH--------HC--------------CCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc
Confidence 46999999999999988721 11 1125777776654211 11111111122244444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
.- .+.+.+++|+++|.. +|++ ..+++.-.+-|+|
T Consensus 101 ~~----~~~~~~~fD~I~s~~-~~~~-----------------------------------------~~~~~~~~~~Lkp 134 (181)
T TIGR00138 101 AE----DFQHEEQFDVITSRA-LASL-----------------------------------------NVLLELTLNLLKV 134 (181)
T ss_pred hh----hccccCCccEEEehh-hhCH-----------------------------------------HHHHHHHHHhcCC
Confidence 32 234568999999865 4332 1344444567999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcc
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIP 272 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P 272 (373)
||++++.... .. ...+....+.+...|+- .-+.+++..|
T Consensus 135 gG~lvi~~~~-~~------------~~~~~~~~e~~~~~~~~-~~~~~~~~~~ 173 (181)
T TIGR00138 135 GGYFLAYKGK-KY------------LDEIEEAKRKCQVLGVE-PLEVPPLTGP 173 (181)
T ss_pred CCEEEEEcCC-Cc------------HHHHHHHHHhhhhcCce-EeeccccCCC
Confidence 9999987421 11 12333344566667763 4455777777
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.7e-05 Score=70.61 Aligned_cols=95 Identities=20% Similarity=0.265 Sum_probs=70.2
Q ss_pred CCCceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc
Q 017363 60 TCGTFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT 127 (373)
Q Consensus 60 ~~~~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~ 127 (373)
.+..-+++|+|||.|.+|..+. ...|+.-++++.. .+.+++..-|+|.
T Consensus 41 ~~ry~~alEvGCs~G~lT~~LA~rCd~LlavDis~~Al~~Ar~Rl~~-----------~~~V~~~~~dvp~--------- 100 (201)
T PF05401_consen 41 RRRYRRALEVGCSIGVLTERLAPRCDRLLAVDISPRALARARERLAG-----------LPHVEWIQADVPE--------- 100 (201)
T ss_dssp TSSEEEEEEE--TTSHHHHHHGGGEEEEEEEES-HHHHHHHHHHTTT------------SSEEEEES-TTT---------
T ss_pred ccccceeEecCCCccHHHHHHHHhhCceEEEeCCHHHHHHHHHhcCC-----------CCCeEEEECcCCC---------
Confidence 3567899999999999999886 5666666666542 3567888888873
Q ss_pred CCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHH
Q 017363 128 MPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTE 207 (373)
Q Consensus 128 l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~ 207 (373)
..|++++|+++.+-.+++|+..+ |+.
T Consensus 101 -------------------~~P~~~FDLIV~SEVlYYL~~~~-----------------------------------~L~ 126 (201)
T PF05401_consen 101 -------------------FWPEGRFDLIVLSEVLYYLDDAE-----------------------------------DLR 126 (201)
T ss_dssp ----------------------SS-EEEEEEES-GGGSSSHH-----------------------------------HHH
T ss_pred -------------------CCCCCCeeEEEEehHhHcCCCHH-----------------------------------HHH
Confidence 24889999999999999998533 677
Q ss_pred HHHHHHHhhhccCCeEEEEec
Q 017363 208 AFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
.++..-.+-|.|||.||+.-.
T Consensus 127 ~~l~~l~~~L~pgG~LV~g~~ 147 (201)
T PF05401_consen 127 AALDRLVAALAPGGHLVFGHA 147 (201)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEe
Confidence 888999999999999999665
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00026 Score=65.54 Aligned_cols=29 Identities=14% Similarity=0.468 Sum_probs=24.0
Q ss_pred cccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 271 IPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 271 ~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
.+.+..+.+|+...++..| |++.+.+.+.
T Consensus 188 ~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 216 (230)
T PRK07580 188 TRIYPHREKGIRRALAAAG-FKVVRTERIS 216 (230)
T ss_pred CCccccCHHHHHHHHHHCC-CceEeeeecc
Confidence 4567789999999999999 9988877654
|
|
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.5e-05 Score=69.73 Aligned_cols=110 Identities=21% Similarity=0.219 Sum_probs=66.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
.-+|+|+|||+|..|..+++.. . +.-+|+--|+-. .+ .++ +-.|+.+ +
T Consensus 52 ~~~VLDlG~GtG~~t~~l~~~~--------~-------------~~~~V~aVDi~~--~~----~~~--~v~~i~~---D 99 (209)
T PRK11188 52 GMTVVDLGAAPGGWSQYAVTQI--------G-------------DKGRVIACDILP--MD----PIV--GVDFLQG---D 99 (209)
T ss_pred CCEEEEEcccCCHHHHHHHHHc--------C-------------CCceEEEEeccc--cc----CCC--CcEEEec---C
Confidence 3589999999999887774322 1 112566666632 11 111 1223333 3
Q ss_pred cccC--------CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 143 FHGR--------LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 143 Fy~r--------lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+... -++++++|+++|+.+.||... |. .| . + .+ .......|+.-.
T Consensus 100 ~~~~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~-~~--~d-------------------~--~--~~-~~~~~~~L~~~~ 152 (209)
T PRK11188 100 FRDELVLKALLERVGDSKVQVVMSDMAPNMSGT-PA--VD-------------------I--P--RA-MYLVELALDMCR 152 (209)
T ss_pred CCChHHHHHHHHHhCCCCCCEEecCCCCccCCC-hH--HH-------------------H--H--HH-HHHHHHHHHHHH
Confidence 3332 257789999999999999441 11 00 0 0 00 011346888889
Q ss_pred hhhccCCeEEEEeccCC
Q 017363 215 HELVPGGLIVFVLFSLP 231 (373)
Q Consensus 215 ~EL~pGG~lvl~~~g~~ 231 (373)
+-|+|||+|++..+..+
T Consensus 153 ~~LkpGG~~vi~~~~~~ 169 (209)
T PRK11188 153 DVLAPGGSFVVKVFQGE 169 (209)
T ss_pred HHcCCCCEEEEEEecCc
Confidence 99999999999766543
|
|
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.4e-05 Score=71.82 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=34.7
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEE
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
+|.+++|+|+|.++|||++. | +...+|+.-++-|+|||+|++.
T Consensus 199 ~~~~~fD~I~crnvl~yf~~-~-----------------------------------~~~~~l~~l~~~L~pGG~L~lg 241 (264)
T smart00138 199 PPLGDFDLIFCRNVLIYFDE-P-----------------------------------TQRKLLNRFAEALKPGGYLFLG 241 (264)
T ss_pred CccCCCCEEEechhHHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCeEEEEE
Confidence 46889999999999999863 2 3336778888999999999874
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=68.93 Aligned_cols=75 Identities=20% Similarity=0.128 Sum_probs=47.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
.-+|+|+|||+|.++..+.... ..+|+--|+..+- -...+. ..-++ -++
T Consensus 52 ~~~VLDlGcGtG~~~~~l~~~~-----------------------~~~v~gvD~S~~M-l~~a~~----~~~~~---~~d 100 (226)
T PRK05785 52 PKKVLDVAAGKGELSYHFKKVF-----------------------KYYVVALDYAENM-LKMNLV----ADDKV---VGS 100 (226)
T ss_pred CCeEEEEcCCCCHHHHHHHHhc-----------------------CCEEEEECCCHHH-HHHHHh----ccceE---Eec
Confidence 4699999999999887762221 0157777764332 111111 11122 344
Q ss_pred cccCCCCCCcceEEEccCcccccccc
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKI 168 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~ 168 (373)
+..--||++|+|+++|+.+|||+.+.
T Consensus 101 ~~~lp~~d~sfD~v~~~~~l~~~~d~ 126 (226)
T PRK05785 101 FEALPFRDKSFDVVMSSFALHASDNI 126 (226)
T ss_pred hhhCCCCCCCEEEEEecChhhccCCH
Confidence 45555789999999999999997643
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.2e-05 Score=73.62 Aligned_cols=113 Identities=14% Similarity=0.174 Sum_probs=70.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvpg 141 (373)
..+|+|+|||+|..|..+++.... ..+++--|+...--....+.+.. .+..=+.++-|
T Consensus 64 ~~~iLELGcGtG~~t~~Ll~~l~~---------------------~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~g 122 (301)
T TIGR03438 64 GCELVELGSGSSRKTRLLLDALRQ---------------------PARYVPIDISADALKESAAALAADYPQLEVHGICA 122 (301)
T ss_pred CCeEEecCCCcchhHHHHHHhhcc---------------------CCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEE
Confidence 468999999999999988665410 12567777764322222233321 12222334445
Q ss_pred ccccCC-CCCC----cceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 142 SFHGRL-FPKS----SLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 142 SFy~rl-fP~~----Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.|.+.+ +|+. ...++++.+++++++ | .|...||+.-++-
T Consensus 123 D~~~~~~~~~~~~~~~~~~~~~gs~~~~~~--~----------------------------------~e~~~~L~~i~~~ 166 (301)
T TIGR03438 123 DFTQPLALPPEPAAGRRLGFFPGSTIGNFT--P----------------------------------EEAVAFLRRIRQL 166 (301)
T ss_pred cccchhhhhcccccCCeEEEEecccccCCC--H----------------------------------HHHHHHHHHHHHh
Confidence 555432 2322 456778888899976 2 1445799999999
Q ss_pred hccCCeEEEEeccCCC
Q 017363 217 LVPGGLIVFVLFSLPN 232 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~ 232 (373)
|+|||+|++.+-...+
T Consensus 167 L~pgG~~lig~d~~~~ 182 (301)
T TIGR03438 167 LGPGGGLLIGVDLVKD 182 (301)
T ss_pred cCCCCEEEEeccCCCC
Confidence 9999999988765544
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=7.9e-05 Score=70.26 Aligned_cols=212 Identities=15% Similarity=0.167 Sum_probs=118.3
Q ss_pred hhhcCccccccCCCCCc--hhHHhhHHHHHHHHH--------HHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCc
Q 017363 6 ANVLPGSFPMVGGDGDY--SYAKNSSFQRMIIDA--------AKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGP 75 (373)
Q Consensus 6 ~~~~~~~~~M~gG~G~~--sY~~nS~~Q~~~~~~--------~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~ 75 (373)
-+-+++..+|..-+ +. -|..++..+...... -..||.....++++.+ ...+.+|+++|||.|.
T Consensus 12 ~~~~k~~~~~~~~~-~~~~~y~~~~~k~wD~fy~~~~~rFfkdR~wL~~Efpel~~~~------~~~~~~ilEvGCGvGN 84 (264)
T KOG2361|consen 12 RKKVKEQSASRVLE-EEVVKYEREASKYWDTFYKIHENRFFKDRNWLLREFPELLPVD------EKSAETILEVGCGVGN 84 (264)
T ss_pred HHHHhhccccccch-hhhhhhhcchhhhhhhhhhhccccccchhHHHHHhhHHhhCcc------ccChhhheeeccCCCc
Confidence 33355556665532 22 577777776655532 3567777777655432 1224499999999997
Q ss_pred ccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--Cccc--eeeccCcccccCCCCCC
Q 017363 76 NTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKY--FAFGVPGSFHGRLFPKS 151 (373)
Q Consensus 76 NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~--f~~gvpgSFy~rlfP~~ 151 (373)
.++-+++.. +.+.+.+|..|-..+--.-+ +.-.. ...+ |+.-.-++=-..-++++
T Consensus 85 tvfPll~~~--------------------~n~~l~v~acDfsp~Ai~~v-k~~~~~~e~~~~afv~Dlt~~~~~~~~~~~ 143 (264)
T KOG2361|consen 85 TVFPLLKTS--------------------PNNRLKVYACDFSPRAIELV-KKSSGYDESRVEAFVWDLTSPSLKEPPEEG 143 (264)
T ss_pred ccchhhhcC--------------------CCCCeEEEEcCCChHHHHHH-HhccccchhhhcccceeccchhccCCCCcC
Confidence 776663221 23447888888775442222 11111 1111 22222111134455667
Q ss_pred cceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCC
Q 017363 152 SLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 152 Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
|+|++..-+.| |-+|+.- +..-+..-.+-|||||.|++-=.|+.
T Consensus 144 svD~it~IFvL---SAi~pek---------------------------------~~~a~~nl~~llKPGG~llfrDYg~~ 187 (264)
T KOG2361|consen 144 SVDIITLIFVL---SAIHPEK---------------------------------MQSVIKNLRTLLKPGGSLLFRDYGRY 187 (264)
T ss_pred ccceEEEEEEE---eccChHH---------------------------------HHHHHHHHHHHhCCCcEEEEeecccc
Confidence 78877655443 4444332 22455666788999999999888877
Q ss_pred CCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhh-cccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 232 NGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKV-DSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~-d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
+.... +-+ .+-.|++..+ ..=--+.|+-+.+|+++++.+.| |..++++..
T Consensus 188 Dlaql----------------RF~-~~~~i~~nfYVRgDGT~~YfF~~eeL~~~f~~ag-f~~~~~~~~ 238 (264)
T KOG2361|consen 188 DLAQL----------------RFK-KGQCISENFYVRGDGTRAYFFTEEELDELFTKAG-FEEVQLEVD 238 (264)
T ss_pred hHHHH----------------hcc-CCceeecceEEccCCceeeeccHHHHHHHHHhcc-cchhcccce
Confidence 64221 000 1111111100 00013669999999999999999 876666533
|
|
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00012 Score=69.59 Aligned_cols=171 Identities=21% Similarity=0.241 Sum_probs=103.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-----CCC-Cccc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-----MPP-SRKY 134 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-----l~~-~~~~ 134 (373)
....+++|.+||||-.|+.++..+ ..+.+ .-+-+|...|.-.+--+---+. +.. .+-.
T Consensus 99 ~~~m~~lDvaGGTGDiaFril~~v----~s~~~------------~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~ 162 (296)
T KOG1540|consen 99 GKGMKVLDVAGGTGDIAFRILRHV----KSQFG------------DRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVE 162 (296)
T ss_pred CCCCeEEEecCCcchhHHHHHHhh----ccccC------------CCCceEEEEeCCHHHHHHHHHHHhhcCCCcCCceE
Confidence 456999999999999999996665 22211 1122677777754332111110 101 1234
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
|+.|.. ..--||++|+|...+++.+--.-+++.++ .+||
T Consensus 163 w~~~dA---E~LpFdd~s~D~yTiafGIRN~th~~k~l----------------------~EAY---------------- 201 (296)
T KOG1540|consen 163 WVEGDA---EDLPFDDDSFDAYTIAFGIRNVTHIQKAL----------------------REAY---------------- 201 (296)
T ss_pred EEeCCc---ccCCCCCCcceeEEEecceecCCCHHHHH----------------------HHHH----------------
Confidence 666666 34447999999999999887655555333 3455
Q ss_pred hhhccCCeEEEEeccCCCCCCccCCCchhHH---HHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCce
Q 017363 215 HELVPGGLIVFVLFSLPNGVPMIDSNGGKLY---GFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCF 291 (373)
Q Consensus 215 ~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~---~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF 291 (373)
+-|||||+|.+.-+.+-+..+.......+.+ -.+.+.+....+.+..=-+-+. -+|+.||+...+++.| |
T Consensus 202 RVLKpGGrf~cLeFskv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLveSI~------rfp~qe~f~~miedaG-F 274 (296)
T KOG1540|consen 202 RVLKPGGRFSCLEFSKVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVESIR------RFPPQEEFASMIEDAG-F 274 (296)
T ss_pred HhcCCCcEEEEEEccccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHhhhh------cCCCHHHHHHHHHHcC-C
Confidence 5899999999888887764332111111222 2333444433333322111111 4699999999999999 8
Q ss_pred EEeE
Q 017363 292 RIER 295 (373)
Q Consensus 292 ~I~~ 295 (373)
....
T Consensus 275 ~~~~ 278 (296)
T KOG1540|consen 275 SSVN 278 (296)
T ss_pred cccc
Confidence 7654
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0001 Score=70.85 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=43.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+.... .. ....+++-.|+..+--...-+..+ +--|..+.
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~--------~~-----------~~~~~v~giD~s~~~l~~A~~~~~--~~~~~~~d-- 141 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADAL--------PE-----------ITTMQLFGLDISKVAIKYAAKRYP--QVTFCVAS-- 141 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhc--------cc-----------ccCCeEEEECCCHHHHHHHHHhCC--CCeEEEee--
Confidence 34689999999999888774322 10 001267778875433222211111 12233333
Q ss_pred ccccCCCCCCcceEEEccCc
Q 017363 142 SFHGRLFPKSSLHFANSSSS 161 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~a 161 (373)
..+--||++|+|+++|..+
T Consensus 142 -~~~lp~~~~sfD~I~~~~~ 160 (272)
T PRK11088 142 -SHRLPFADQSLDAIIRIYA 160 (272)
T ss_pred -cccCCCcCCceeEEEEecC
Confidence 2333478899999998654
|
|
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00013 Score=66.65 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=63.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---Cccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~gv 139 (373)
.-+|+|+|||+|..++.+.... |..+++--|+-..-....-+.+.. .+-.|+.+.
T Consensus 17 ~~~ilDiGcG~G~~~~~la~~~----------------------p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~~d 74 (194)
T TIGR00091 17 APLHLEIGCGKGRFLIDMAKQN----------------------PDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLCGD 74 (194)
T ss_pred CceEEEeCCCccHHHHHHHHhC----------------------CCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEccC
Confidence 3589999999999998774321 122344444432211111111110 011122222
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
.-.+-..++|++++|.++++...+|..+.- . |.++ ....||+.-++-|+|
T Consensus 75 ~~~~~~~~~~~~~~d~v~~~~pdpw~k~~h-~----------~~r~-------------------~~~~~l~~~~r~Lkp 124 (194)
T TIGR00091 75 ANELLDKFFPDGSLSKVFLNFPDPWPKKRH-N----------KRRI-------------------TQPHFLKEYANVLKK 124 (194)
T ss_pred HHHHHHhhCCCCceeEEEEECCCcCCCCCc-c----------cccc-------------------CCHHHHHHHHHHhCC
Confidence 222223456778999999999999954210 0 0011 113688888899999
Q ss_pred CCeEEEEec
Q 017363 220 GGLIVFVLF 228 (373)
Q Consensus 220 GG~lvl~~~ 228 (373)
||.+++..-
T Consensus 125 gG~l~~~td 133 (194)
T TIGR00091 125 GGVIHFKTD 133 (194)
T ss_pred CCEEEEEeC
Confidence 999988763
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00054 Score=66.84 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQN 83 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ 83 (373)
-.+|+|+|||+|..|..+.+.
T Consensus 133 G~~VLDLGaG~G~~t~~lAdi 153 (293)
T PTZ00146 133 GSKVLYLGAASGTTVSHVSDL 153 (293)
T ss_pred CCEEEEeCCcCCHHHHHHHHH
Confidence 368999999999988777443
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00063 Score=63.43 Aligned_cols=58 Identities=16% Similarity=0.299 Sum_probs=41.8
Q ss_pred HHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHH
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIE 286 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie 286 (373)
..+++.-.+-|+|||++++..+..+.... .| |-|.-+.+|+++.+.
T Consensus 132 ~~~~~~l~~lLkpgG~~ll~~~~~~~~~~----------------------~g------------pp~~~~~~eL~~~f~ 177 (213)
T TIGR03840 132 QRYAAHLLALLPPGARQLLITLDYDQSEM----------------------AG------------PPFSVSPAEVEALYG 177 (213)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEEcCCCCC----------------------CC------------cCCCCCHHHHHHHhc
Confidence 46788889999999998887776542211 12 447789999999987
Q ss_pred hcCceEEeEEEEec
Q 017363 287 RNGCFRIERMDKLP 300 (373)
Q Consensus 287 ~~gsF~I~~le~~~ 300 (373)
.. |+|+.++...
T Consensus 178 ~~--~~i~~~~~~~ 189 (213)
T TIGR03840 178 GH--YEIELLESRD 189 (213)
T ss_pred CC--ceEEEEeecc
Confidence 43 8888877543
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00027 Score=65.40 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=59.5
Q ss_pred CCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCC
Q 017363 20 GDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDN 99 (373)
Q Consensus 20 G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~ 99 (373)
|.. |-+....+... .....++.+.+.. + ++.-+|+|+|||+|.++..+....
T Consensus 14 g~~-~~~rn~~~~~~-~~~~~~~~~~l~~---~--------~~~~~VLDiGCG~G~~~~~L~~~~--------------- 65 (204)
T TIGR03587 14 GKE-YIDRNSRQSLV-AAKLAMFARALNR---L--------PKIASILELGANIGMNLAALKRLL--------------- 65 (204)
T ss_pred cch-hhhccccHHHH-HHHHHHHHHHHHh---c--------CCCCcEEEEecCCCHHHHHHHHhC---------------
Confidence 434 54444433333 3344555555543 1 234679999999998888773211
Q ss_pred cCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccc
Q 017363 100 HQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 100 ~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
+..+++--|+..+-....=+.++. .-+.. ++... .+|++++|+|+++.+||+++
T Consensus 66 -------~~~~v~giDiS~~~l~~A~~~~~~--~~~~~---~d~~~-~~~~~sfD~V~~~~vL~hl~ 119 (204)
T TIGR03587 66 -------PFKHIYGVEINEYAVEKAKAYLPN--INIIQ---GSLFD-PFKDNFFDLVLTKGVLIHIN 119 (204)
T ss_pred -------CCCeEEEEECCHHHHHHHHhhCCC--CcEEE---eeccC-CCCCCCEEEEEECChhhhCC
Confidence 122566667654332222111221 12222 33344 57899999999999998864
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00055 Score=62.62 Aligned_cols=24 Identities=17% Similarity=0.158 Sum_probs=19.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEEec
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
++..|++..++-|+|||++++..+
T Consensus 123 ~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 123 SLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 344688899999999999998853
|
|
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=97.63 E-value=4.4e-05 Score=61.92 Aligned_cols=98 Identities=21% Similarity=0.263 Sum_probs=58.6
Q ss_pred EeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeeccCccc
Q 017363 66 LADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGVPGSF 143 (373)
Q Consensus 66 IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gvpgSF 143 (373)
|+|+|||+|.++..+.... +. .|+.++..-|+-.+-....=+... ..+--|..+.....
T Consensus 1 ILDlgcG~G~~~~~l~~~~---------~~----------~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l 61 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRF---------DA----------GPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDL 61 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS------------------------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCH
T ss_pred CEEeecCCcHHHHHHHHHh---------hh----------cccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHC
Confidence 7999999999999885442 00 122367777776544332222221 11223455544221
Q ss_pred ccCCCCCCcceEEEccCc-ccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 144 HGRLFPKSSLHFANSSSS-LNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~a-lHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
-++.+++|+++++.+ +|++++ +++..+|+.-++-|+|||
T Consensus 62 ---~~~~~~~D~v~~~~~~~~~~~~------------------------------------~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 62 ---PFSDGKFDLVVCSGLSLHHLSP------------------------------------EELEALLRRIARLLRPGG 101 (101)
T ss_dssp ---HHHSSSEEEEEE-TTGGGGSSH------------------------------------HHHHHHHHHHHHTEEEEE
T ss_pred ---cccCCCeeEEEEcCCccCCCCH------------------------------------HHHHHHHHHHHHHhCCCC
Confidence 236779999999666 998762 256689999999999998
|
|
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00062 Score=60.88 Aligned_cols=108 Identities=15% Similarity=0.192 Sum_probs=61.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gvp 140 (373)
.-+|+|+|||+|..++.+.. + .|...|...|.-.+-....=+++. .... +..+.
T Consensus 32 ~~~vLDlG~G~G~i~~~la~--------~--------------~~~~~v~~vDi~~~a~~~a~~n~~~n~~~~--v~~~~ 87 (170)
T PF05175_consen 32 GGRVLDLGCGSGVISLALAK--------R--------------GPDAKVTAVDINPDALELAKRNAERNGLEN--VEVVQ 87 (170)
T ss_dssp TCEEEEETSTTSHHHHHHHH--------T--------------STCEEEEEEESBHHHHHHHHHHHHHTTCTT--EEEEE
T ss_pred CCeEEEecCChHHHHHHHHH--------h--------------CCCCEEEEEcCCHHHHHHHHHHHHhcCccc--ccccc
Confidence 46799999999999998832 1 123346666664333222222221 1111 22223
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
...++.+ +++++|+++|+=-+|+-...- ..-+..|++.-.+-|+||
T Consensus 88 ~d~~~~~-~~~~fD~Iv~NPP~~~~~~~~---------------------------------~~~~~~~i~~a~~~Lk~~ 133 (170)
T PF05175_consen 88 SDLFEAL-PDGKFDLIVSNPPFHAGGDDG---------------------------------LDLLRDFIEQARRYLKPG 133 (170)
T ss_dssp SSTTTTC-CTTCEEEEEE---SBTTSHCH---------------------------------HHHHHHHHHHHHHHEEEE
T ss_pred ccccccc-cccceeEEEEccchhcccccc---------------------------------hhhHHHHHHHHHHhccCC
Confidence 3344443 378999999987655533110 012346788888999999
Q ss_pred CeEEEEec
Q 017363 221 GLIVFVLF 228 (373)
Q Consensus 221 G~lvl~~~ 228 (373)
|.|+++.-
T Consensus 134 G~l~lv~~ 141 (170)
T PF05175_consen 134 GRLFLVIN 141 (170)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEee
Confidence 99988664
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00037 Score=70.47 Aligned_cols=105 Identities=13% Similarity=0.144 Sum_probs=62.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CCC--ccceee
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PPS--RKYFAF 137 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~~--~~~f~~ 137 (373)
-+|+|+|||+|..++.+.+ + .|..+|+..|...--....=.++ +.. +--|..
T Consensus 230 ~~VLDLGCGtGvi~i~la~--------~--------------~P~~~V~~vD~S~~Av~~A~~N~~~n~~~~~~~v~~~~ 287 (378)
T PRK15001 230 GEIVDLGCGNGVIGLTLLD--------K--------------NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 (378)
T ss_pred CeEEEEeccccHHHHHHHH--------h--------------CCCCEEEEEECCHHHHHHHHHHHHHcCcccCceEEEEE
Confidence 5899999999998876622 1 23447777777531111111111 100 112222
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ ..+.. +++.++|+|+|+-.+|+...++.. ....+++.-.+-|
T Consensus 288 ~---D~l~~-~~~~~fDlIlsNPPfh~~~~~~~~---------------------------------ia~~l~~~a~~~L 330 (378)
T PRK15001 288 N---NALSG-VEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRCL 330 (378)
T ss_pred c---ccccc-CCCCCEEEEEECcCcccCccCCHH---------------------------------HHHHHHHHHHHhc
Confidence 2 22333 355789999999999985432211 1124676667889
Q ss_pred ccCCeEEEEe
Q 017363 218 VPGGLIVFVL 227 (373)
Q Consensus 218 ~pGG~lvl~~ 227 (373)
+|||.|+++.
T Consensus 331 kpGG~L~iV~ 340 (378)
T PRK15001 331 KINGELYIVA 340 (378)
T ss_pred ccCCEEEEEE
Confidence 9999999984
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0012 Score=61.90 Aligned_cols=58 Identities=24% Similarity=0.363 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHH
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIE 286 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie 286 (373)
..+++.-++-|+|||++++.......... .| |-|.-|.+|+++.+.
T Consensus 135 ~~~~~~l~~lL~pgG~~~l~~~~~~~~~~----------------------~g------------Pp~~~~~~el~~~~~ 180 (218)
T PRK13255 135 ERYVQQLAALLPAGCRGLLVTLDYPQEEL----------------------AG------------PPFSVSDEEVEALYA 180 (218)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEEeCCccC----------------------CC------------CCCCCCHHHHHHHhc
Confidence 36778888999999986665554332110 12 446789999999996
Q ss_pred hcCceEEeEEEEec
Q 017363 287 RNGCFRIERMDKLP 300 (373)
Q Consensus 287 ~~gsF~I~~le~~~ 300 (373)
.. |+|+.++...
T Consensus 181 ~~--~~i~~~~~~~ 192 (218)
T PRK13255 181 GC--FEIELLERQD 192 (218)
T ss_pred CC--ceEEEeeecc
Confidence 32 8988887543
|
|
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0016 Score=64.28 Aligned_cols=29 Identities=10% Similarity=0.437 Sum_probs=23.8
Q ss_pred cccCCHHHHHHHHHhcCceEEeEEEEecCC
Q 017363 273 LYFPTAEELKAIIERNGCFRIERMDKLPDP 302 (373)
Q Consensus 273 ~y~ps~eE~~~~ie~~gsF~I~~le~~~~~ 302 (373)
.|+.+.+|++.+++..| |+|...+.....
T Consensus 275 ~y~~s~eel~~lL~~AG-f~v~~~~~~~~~ 303 (315)
T PLN02585 275 AYLHAEADVERALKKAG-WKVARREMTATQ 303 (315)
T ss_pred eeeCCHHHHHHHHHHCC-CEEEEEEEeecc
Confidence 36679999999999999 999887766533
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0005 Score=65.49 Aligned_cols=116 Identities=18% Similarity=0.158 Sum_probs=73.7
Q ss_pred CCceEEeeecCCCCcccHHHHHH--------------HHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQN--------------IIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ 126 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~--------------ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~ 126 (373)
+..-+|+|+|||.|..++.+.+. ..+..++....+ .-...++|+.-|+ +..
T Consensus 43 ~~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~nv~ln--------~l~~ri~v~~~Di-----~~~-- 107 (248)
T COG4123 43 PKKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQRNVALN--------PLEERIQVIEADI-----KEF-- 107 (248)
T ss_pred ccCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHHHHHhC--------cchhceeEehhhH-----HHh--
Confidence 34799999999999999998654 222222222111 0122355555554 222
Q ss_pred cCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcH
Q 017363 127 TMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDT 206 (373)
Q Consensus 127 ~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~ 206 (373)
.+-.+.+++|+|+|+ |+ |++-... ..+.+..+-.+-+..-++
T Consensus 108 ------------------~~~~~~~~fD~Ii~N---------PP---------yf~~~~~--~~~~~~~~~Ar~e~~~~l 149 (248)
T COG4123 108 ------------------LKALVFASFDLIICN---------PP---------YFKQGSR--LNENPLRAIARHEITLDL 149 (248)
T ss_pred ------------------hhcccccccCEEEeC---------CC---------CCCCccc--cCcChhhhhhhhhhcCCH
Confidence 223334589999986 32 2222222 234556666677788899
Q ss_pred HHHHHHHHhhhccCCeEEEEecc
Q 017363 207 EAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..+++.-++-|||||++.++...
T Consensus 150 e~~i~~a~~~lk~~G~l~~V~r~ 172 (248)
T COG4123 150 EDLIRAAAKLLKPGGRLAFVHRP 172 (248)
T ss_pred HHHHHHHHHHccCCCEEEEEecH
Confidence 99999999999999999887643
|
|
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00031 Score=54.37 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=60.7
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHh---hcCCCCccceeeccCc
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF---QTMPPSRKYFAFGVPG 141 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf---~~l~~~~~~f~~gvpg 141 (373)
+|+|+|||.|.++..+.. .+..+++..|+..+-....- ......+..|..+..
T Consensus 1 ~ildig~G~G~~~~~~~~-----------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 56 (107)
T cd02440 1 RVLDLGCGTGALALALAS-----------------------GPGARVTGVDISPVALELARKAAAALLADNVEVLKGDA- 56 (107)
T ss_pred CeEEEcCCccHHHHHHhc-----------------------CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEEcCh-
Confidence 589999999998877632 01126777777544333222 111111222333322
Q ss_pred ccccCC-CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRL-FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rl-fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.... .+.+++|+++++..+++.+ .+...+|+.-..-|+||
T Consensus 57 --~~~~~~~~~~~d~i~~~~~~~~~~-------------------------------------~~~~~~l~~~~~~l~~~ 97 (107)
T cd02440 57 --EELPPEADESFDVIISDPPLHHLV-------------------------------------EDLARFLEEARRLLKPG 97 (107)
T ss_pred --hhhccccCCceEEEEEccceeehh-------------------------------------hHHHHHHHHHHHHcCCC
Confidence 2222 3567899999999999861 13446777777888999
Q ss_pred CeEEEE
Q 017363 221 GLIVFV 226 (373)
Q Consensus 221 G~lvl~ 226 (373)
|.+++.
T Consensus 98 g~~~~~ 103 (107)
T cd02440 98 GVLVLT 103 (107)
T ss_pred CEEEEE
Confidence 999886
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00055 Score=61.98 Aligned_cols=25 Identities=28% Similarity=0.311 Sum_probs=20.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+...+|+.-.+-|+|||++++..+.
T Consensus 124 ~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 124 LVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcc
Confidence 4567889999999999999997543
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00023 Score=58.78 Aligned_cols=22 Identities=36% Similarity=0.495 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhccCCeEEEEec
Q 017363 207 EAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
..+++.-++.|+|||++++.+.
T Consensus 102 ~~~l~~~~~~Lk~gG~li~~~~ 123 (124)
T TIGR02469 102 QEILEAIWRRLRPGGRIVLNAI 123 (124)
T ss_pred HHHHHHHHHHcCCCCEEEEEec
Confidence 3688889999999999998763
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00019 Score=71.58 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=63.1
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccCc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVPG 141 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvpg 141 (373)
-+|+|+|||+|..++.+.. + .|..+|...|....-....=.++.. ...-+. ++
T Consensus 198 g~VLDlGCG~G~ls~~la~--------~--------------~p~~~v~~vDis~~Al~~A~~nl~~n~l~~~~~---~~ 252 (342)
T PRK09489 198 GKVLDVGCGAGVLSAVLAR--------H--------------SPKIRLTLSDVSAAALESSRATLAANGLEGEVF---AS 252 (342)
T ss_pred CeEEEeccCcCHHHHHHHH--------h--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEE---Ec
Confidence 4799999999998876622 1 1234677777743211111111110 011122 22
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..+.. .++++|+++|+-.+||.-..- ..+...|++.-++-|+|||
T Consensus 253 D~~~~--~~~~fDlIvsNPPFH~g~~~~---------------------------------~~~~~~~i~~a~~~LkpgG 297 (342)
T PRK09489 253 NVFSD--IKGRFDMIISNPPFHDGIQTS---------------------------------LDAAQTLIRGAVRHLNSGG 297 (342)
T ss_pred ccccc--cCCCccEEEECCCccCCcccc---------------------------------HHHHHHHHHHHHHhcCcCC
Confidence 23332 357899999999999832110 1245678999999999999
Q ss_pred eEEEEec
Q 017363 222 LIVFVLF 228 (373)
Q Consensus 222 ~lvl~~~ 228 (373)
.|+++..
T Consensus 298 ~L~iVan 304 (342)
T PRK09489 298 ELRIVAN 304 (342)
T ss_pred EEEEEEe
Confidence 9988754
|
|
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00082 Score=59.60 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=60.7
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
++++++|++++++++||+. |...+|+.-++-|||||+|++.-
T Consensus 40 ~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~ei~rvLkpGG~l~i~d 81 (160)
T PLN02232 40 FDDCEFDAVTMGYGLRNVV--------------------------------------DRLRAMKEMYRVLKPGSRVSILD 81 (160)
T ss_pred CCCCCeeEEEecchhhcCC--------------------------------------CHHHHHHHHHHHcCcCeEEEEEE
Confidence 5778999999999999974 34468888889999999999987
Q ss_pred ccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcc----cccCCHHHHHHHHHhcCceEEeE
Q 017363 228 FSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIP----LYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P----~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
++.++.... ...+..... .-+.--|.+... .+.+..- ..+++.+|+.+++++.| |+..+
T Consensus 82 ~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~-~~~y~yl~~si~~f~~~~el~~ll~~aG-F~~~~ 144 (160)
T PLN02232 82 FNKSNQSVT-----TFMQGWMID--NVVVPVATVYDL-AKEYEYLKYSINGYLTGEELETLALEAG-FSSAC 144 (160)
T ss_pred CCCCChHHH-----HHHHHHHcc--chHhhhhHHhCC-hHHHHhHHHHHHHCcCHHHHHHHHHHcC-CCcce
Confidence 776543210 001100000 000000111100 1111111 25689999999999999 86433
|
|
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0033 Score=58.99 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=70.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+.-+|+|+|+|+|..+..+ .++ -|.+++..-|||..= ...+. .. =+.-+||
T Consensus 100 ~~~~vvDvGGG~G~~~~~l--------~~~--------------~P~l~~~v~Dlp~v~--~~~~~---~~--rv~~~~g 150 (241)
T PF00891_consen 100 GFKTVVDVGGGSGHFAIAL--------ARA--------------YPNLRATVFDLPEVI--EQAKE---AD--RVEFVPG 150 (241)
T ss_dssp TSSEEEEET-TTSHHHHHH--------HHH--------------STTSEEEEEE-HHHH--CCHHH---TT--TEEEEES
T ss_pred CccEEEeccCcchHHHHHH--------HHH--------------CCCCcceeeccHhhh--hcccc---cc--ccccccc
Confidence 4568999999999988777 222 356689999999521 11111 11 2344889
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC-
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG- 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG- 220 (373)
.|+ .-+|. .|+++-...||=.+. ++-..+|+.-++.|+||
T Consensus 151 d~f-~~~P~--~D~~~l~~vLh~~~d------------------------------------~~~~~iL~~~~~al~pg~ 191 (241)
T PF00891_consen 151 DFF-DPLPV--ADVYLLRHVLHDWSD------------------------------------EDCVKILRNAAAALKPGK 191 (241)
T ss_dssp -TT-TCCSS--ESEEEEESSGGGS-H------------------------------------HHHHHHHHHHHHHSEECT
T ss_pred cHH-hhhcc--ccceeeehhhhhcch------------------------------------HHHHHHHHHHHHHhCCCC
Confidence 999 67777 999999999983231 24447999999999999
Q ss_pred -CeEEEEeccCCCC
Q 017363 221 -GLIVFVLFSLPNG 233 (373)
Q Consensus 221 -G~lvl~~~g~~~~ 233 (373)
|++++.=.-.++.
T Consensus 192 ~g~llI~e~~~~~~ 205 (241)
T PF00891_consen 192 DGRLLIIEMVLPDD 205 (241)
T ss_dssp TEEEEEEEEEECSS
T ss_pred CCeEEEEeeccCCC
Confidence 9998887665544
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0013 Score=59.39 Aligned_cols=20 Identities=25% Similarity=0.326 Sum_probs=16.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDiG~G~G~~~~~la 50 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEAA 50 (187)
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34689999999999998873
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0015 Score=60.25 Aligned_cols=19 Identities=11% Similarity=0.172 Sum_probs=16.2
Q ss_pred CceEEeeecCCCCcccHHH
Q 017363 62 GTFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~ 80 (373)
...+|+|+|||+|..|..+
T Consensus 78 ~~~~VLeiG~GsG~~t~~l 96 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVL 96 (212)
T ss_pred CCCEEEEECCCccHHHHHH
Confidence 4579999999999999754
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0011 Score=59.38 Aligned_cols=124 Identities=13% Similarity=0.024 Sum_probs=65.2
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCccc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSF 143 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSF 143 (373)
.+|+|+|||+|..++.+... .+ +|+..|+-..--...=+.+... .+-+..+-+.+
T Consensus 21 ~~vLdlG~G~G~~~~~l~~~----------------------~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~ 75 (179)
T TIGR00537 21 DDVLEIGAGTGLVAIRLKGK----------------------GK--CILTTDINPFAVKELRENAKLN-NVGLDVVMTDL 75 (179)
T ss_pred CeEEEeCCChhHHHHHHHhc----------------------CC--EEEEEECCHHHHHHHHHHHHHc-CCceEEEEccc
Confidence 57999999999988876421 11 5666666432211111111100 00011122333
Q ss_pred ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeE
Q 017363 144 HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLI 223 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 223 (373)
++. +.+++|+++|+..+|.....+.. .+....++..| .. -...+..||+.-.+-|+|||++
T Consensus 76 ~~~--~~~~fD~Vi~n~p~~~~~~~~~~-~~~~~~~~~~~-------~~---------~~~~~~~~l~~~~~~Lk~gG~~ 136 (179)
T TIGR00537 76 FKG--VRGKFDVILFNPPYLPLEDDLRR-GDWLDVAIDGG-------KD---------GRKVIDRFLDELPEILKEGGRV 136 (179)
T ss_pred ccc--cCCcccEEEECCCCCCCcchhcc-cchhhhhhhcC-------Cc---------hHHHHHHHHHhHHHhhCCCCEE
Confidence 442 24589999999998865432210 00000000000 00 0112457888888999999999
Q ss_pred EEEeccCC
Q 017363 224 VFVLFSLP 231 (373)
Q Consensus 224 vl~~~g~~ 231 (373)
++...+..
T Consensus 137 ~~~~~~~~ 144 (179)
T TIGR00537 137 QLIQSSLN 144 (179)
T ss_pred EEEEeccC
Confidence 99876544
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=61.95 Aligned_cols=23 Identities=13% Similarity=0.246 Sum_probs=18.4
Q ss_pred HHHHHHHhhhccCCeEEEEeccC
Q 017363 208 AFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
.+|+.-++-|||||++++++..+
T Consensus 157 ~~L~~~~r~LKpGG~lvI~v~~~ 179 (226)
T PRK04266 157 IAIDNAEFFLKDGGYLLLAIKAR 179 (226)
T ss_pred HHHHHHHHhcCCCcEEEEEEecc
Confidence 35666678899999999987764
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0018 Score=60.03 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=16.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|..|..+.
T Consensus 76 ~g~~VLdIG~GsG~~t~~la 95 (212)
T PRK13942 76 EGMKVLEIGTGSGYHAAVVA 95 (212)
T ss_pred CcCEEEEECCcccHHHHHHH
Confidence 34799999999999997764
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00063 Score=62.71 Aligned_cols=20 Identities=15% Similarity=0.360 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|..+.+
T Consensus 73 ~~~VLDiG~GsG~~~~~la~ 92 (205)
T PRK13944 73 GMKILEVGTGSGYQAAVCAE 92 (205)
T ss_pred CCEEEEECcCccHHHHHHHH
Confidence 46899999999999977743
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0009 Score=61.99 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|.+|..+.
T Consensus 77 ~~~~VLDiG~GsG~~a~~la 96 (215)
T TIGR00080 77 PGMKVLEIGTGSGYQAAVLA 96 (215)
T ss_pred CcCEEEEECCCccHHHHHHH
Confidence 34699999999999998763
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0039 Score=56.91 Aligned_cols=47 Identities=17% Similarity=0.110 Sum_probs=31.8
Q ss_pred CceEEeeecCCCCcccHHHH--------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCC
Q 017363 62 GTFKLADFGCSVGPNTFIAV--------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHY 117 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~--------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp 117 (373)
+--++.|+|||||.-|+..+ ...++.+++.+.+-+ .+.+++.--|-|
T Consensus 34 ~g~~l~DIGaGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg---------~~n~~vv~g~Ap 94 (187)
T COG2242 34 PGDRLWDIGAGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFG---------VDNLEVVEGDAP 94 (187)
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhC---------CCcEEEEeccch
Confidence 34699999999999999887 335556666555442 234556655555
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0029 Score=58.94 Aligned_cols=167 Identities=19% Similarity=0.136 Sum_probs=81.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
.-+|+|+|||+|..++.+... . . -+++..|....-....-+++.... .-+..+-+.
T Consensus 37 ~~~vLDlGcG~G~~~~~la~~---------~------------~--~~v~~vD~s~~~l~~a~~n~~~~~-~~~~~~~~d 92 (223)
T PRK14967 37 GRRVLDLCTGSGALAVAAAAA---------G------------A--GSVTAVDISRRAVRSARLNALLAG-VDVDVRRGD 92 (223)
T ss_pred CCeEEEecCCHHHHHHHHHHc---------C------------C--CeEEEEECCHHHHHHHHHHHHHhC-CeeEEEECc
Confidence 368999999999988876321 0 0 146666664322111111110000 001122244
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcC-CCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDS-RSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~-~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+.. .+|++++|+++++--.+..+... ..+. ....|+.| .. -..++..|++.-.+-|+|||
T Consensus 93 ~~~-~~~~~~fD~Vi~npPy~~~~~~~--~~~~~~~~~~~~~------~~----------~~~~~~~~l~~a~~~Lk~gG 153 (223)
T PRK14967 93 WAR-AVEFRPFDVVVSNPPYVPAPPDA--PPSRGPARAWDAG------PD----------GRAVLDRLCDAAPALLAPGG 153 (223)
T ss_pred hhh-hccCCCeeEEEECCCCCCCCccc--ccccChhHhhhCC------Cc----------HHHHHHHHHHHHHHhcCCCc
Confidence 444 35778999999975443322111 0000 00011111 00 01245678888888999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcC
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNG 289 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~g 289 (373)
++++......+. .+++..+...|+ .-+.+.+..+|+ .+..-.....+++.|
T Consensus 154 ~l~~~~~~~~~~---------------~~~~~~l~~~g~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 204 (223)
T PRK14967 154 SLLLVQSELSGV---------------ERTLTRLSEAGL-DAEVVASQWIPF-GPVLRARAAWLERRG 204 (223)
T ss_pred EEEEEEecccCH---------------HHHHHHHHHCCC-CeEEEEeeccCc-cHHHHHHHHHHHHcC
Confidence 999775554211 122333334443 344444555563 332333445566776
|
|
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0047 Score=57.27 Aligned_cols=168 Identities=16% Similarity=0.181 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecC
Q 017363 36 DAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFND 115 (373)
Q Consensus 36 ~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nD 115 (373)
++.++-|.+.+++.++ ..+. +|+|+|||||--+..+... -|.+++-=+|
T Consensus 8 eRNk~pIl~vL~~~l~--------~~~~-~vLEiaSGtGqHa~~FA~~----------------------lP~l~WqPSD 56 (204)
T PF06080_consen 8 ERNKDPILEVLKQYLP--------DSGT-RVLEIASGTGQHAVYFAQA----------------------LPHLTWQPSD 56 (204)
T ss_pred hhCHhHHHHHHHHHhC--------ccCc-eEEEEcCCccHHHHHHHHH----------------------CCCCEEcCCC
Confidence 4444555556655442 1222 8999999999887776322 3566788888
Q ss_pred CCCCchhhHhhcCC-----CC-ccc--------eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCC
Q 017363 116 HYGNDFNTLFQTMP-----PS-RKY--------FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWN 181 (373)
Q Consensus 116 Lp~NDFn~lf~~l~-----~~-~~~--------f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~n 181 (373)
...+-+.++-.-+. .- ++. .....+. .++.+++|.++|.+.+|-.+--
T Consensus 57 ~~~~~~~sI~a~~~~~~~~Nv~~P~~lDv~~~~w~~~~~~-----~~~~~~~D~i~~~N~lHI~p~~------------- 118 (204)
T PF06080_consen 57 PDDNLRPSIRAWIAEAGLPNVRPPLALDVSAPPWPWELPA-----PLSPESFDAIFCINMLHISPWS------------- 118 (204)
T ss_pred CChHHHhhHHHHHHhcCCcccCCCeEeecCCCCCcccccc-----ccCCCCcceeeehhHHHhcCHH-------------
Confidence 88877766654321 10 111 1222111 1267899999999999985421
Q ss_pred CCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC
Q 017363 182 KGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI 261 (373)
Q Consensus 182 kg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 261 (373)
.-..+++.-++-|+|||.|++.-+=..++...++. . ..+...|+ ..
T Consensus 119 -----------------------~~~~lf~~a~~~L~~gG~L~~YGPF~~~G~~ts~S-N----~~FD~sLr---~r--- 164 (204)
T PF06080_consen 119 -----------------------AVEGLFAGAARLLKPGGLLFLYGPFNRDGKFTSES-N----AAFDASLR---SR--- 164 (204)
T ss_pred -----------------------HHHHHHHHHHHhCCCCCEEEEeCCcccCCEeCCcH-H----HHHHHHHh---cC---
Confidence 12357788889999999999988766655443322 1 22233333 11
Q ss_pred ChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 262 DEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 262 ~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
+.-|-.|..+++.++-...| ++.+.
T Consensus 165 --------dp~~GiRD~e~v~~lA~~~G-L~l~~ 189 (204)
T PF06080_consen 165 --------DPEWGIRDIEDVEALAAAHG-LELEE 189 (204)
T ss_pred --------CCCcCccCHHHHHHHHHHCC-CccCc
Confidence 22246689999999999999 65443
|
The function of this family is unknown. |
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0018 Score=65.65 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---Cccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~gv 139 (373)
.-+++|+|||+|..++.+... .|+..++--|.-..-...+-+.+.. .+-.++.+.
T Consensus 123 ~p~vLEIGcGsG~~ll~lA~~----------------------~P~~~~iGIEI~~~~i~~a~~ka~~~gL~NV~~i~~D 180 (390)
T PRK14121 123 EKILIEIGFGSGRHLLYQAKN----------------------NPNKLFIGIEIHTPSIEQVLKQIELLNLKNLLIINYD 180 (390)
T ss_pred CCeEEEEcCcccHHHHHHHHh----------------------CCCCCEEEEECCHHHHHHHHHHHHHcCCCcEEEEECC
Confidence 348999999999988877422 1223444444433222222222110 111233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
..-+. ..+|++|+|.++.+....|..+.. .|+ -...||+.-++-|+|
T Consensus 181 A~~ll-~~~~~~s~D~I~lnFPdPW~KkrH-------------RRl-------------------v~~~fL~e~~RvLkp 227 (390)
T PRK14121 181 ARLLL-ELLPSNSVEKIFVHFPVPWDKKPH-------------RRV-------------------ISEDFLNEALRVLKP 227 (390)
T ss_pred HHHhh-hhCCCCceeEEEEeCCCCccccch-------------hhc-------------------cHHHHHHHHHHHcCC
Confidence 32222 357899999999988888833210 011 124789999999999
Q ss_pred CCeEEEEe
Q 017363 220 GGLIVFVL 227 (373)
Q Consensus 220 GG~lvl~~ 227 (373)
||.+.+.+
T Consensus 228 GG~l~l~T 235 (390)
T PRK14121 228 GGTLELRT 235 (390)
T ss_pred CcEEEEEE
Confidence 99998765
|
|
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0034 Score=60.80 Aligned_cols=120 Identities=12% Similarity=0.115 Sum_probs=69.2
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCccc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSF 143 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSF 143 (373)
-+|+|+|||+|..++.+... . +..+|+..|+-. ++-.+.+..-+ +.-+..+..
T Consensus 66 grVLDLGcGsGilsl~la~r--------~--------------~~~~V~gVDisp-~al~~Ar~n~~-~v~~v~~D~--- 118 (279)
T PHA03411 66 GKVLDLCAGIGRLSFCMLHR--------C--------------KPEKIVCVELNP-EFARIGKRLLP-EAEWITSDV--- 118 (279)
T ss_pred CeEEEcCCCCCHHHHHHHHh--------C--------------CCCEEEEEECCH-HHHHHHHHhCc-CCEEEECch---
Confidence 58999999999877765221 1 112677777754 22333332111 122333333
Q ss_pred ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhh--cHHHHHHHHHhhhccCC
Q 017363 144 HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKN--DTEAFLNARAHELVPGG 221 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~--D~~~FL~~Ra~EL~pGG 221 (373)
.+ +.+..++|+++|+-.++++.... ..+ ...|+.|.. ..+ .+..||...+.=|+|+|
T Consensus 119 ~e-~~~~~kFDlIIsNPPF~~l~~~d--~~~--~~~~~GG~~----------------g~~~l~~~~~l~~v~~~L~p~G 177 (279)
T PHA03411 119 FE-FESNEKFDVVISNPPFGKINTTD--TKD--VFEYTGGEF----------------EFKVMTLGQKFADVGYFIVPTG 177 (279)
T ss_pred hh-hcccCCCcEEEEcCCccccCchh--hhh--hhhhccCcc----------------ccccccHHHHHhhhHheecCCc
Confidence 32 23457899999999999965221 111 012221110 001 25689999999999999
Q ss_pred eEEEEeccCC
Q 017363 222 LIVFVLFSLP 231 (373)
Q Consensus 222 ~lvl~~~g~~ 231 (373)
.+.+...|++
T Consensus 178 ~~~~~yss~~ 187 (279)
T PHA03411 178 SAGFAYSGRP 187 (279)
T ss_pred eEEEEEeccc
Confidence 8888755533
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0019 Score=59.25 Aligned_cols=94 Identities=19% Similarity=0.308 Sum_probs=63.9
Q ss_pred CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEE
Q 017363 147 LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 147 lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
-||++|+|.|+-+-+|+=+.+ |..+.. +-|+-|.+.+++
T Consensus 70 ~f~d~sFD~VIlsqtLQ~~~~-P~~vL~----------------------------------------EmlRVgr~~IVs 108 (193)
T PF07021_consen 70 DFPDQSFDYVILSQTLQAVRR-PDEVLE----------------------------------------EMLRVGRRAIVS 108 (193)
T ss_pred hCCCCCccEEehHhHHHhHhH-HHHHHH----------------------------------------HHHHhcCeEEEE
Confidence 489999999999999998764 544432 346778899988
Q ss_pred eccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccc------cCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 227 LFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLY------FPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 227 ~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y------~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
|+.-.. |..- ..|.-.|..+..+ .+..+|| +-|..+++++.++.| ++|++-..+.
T Consensus 109 FPNFg~------------W~~R----~~l~~~GrmPvt~--~lPy~WYdTPNih~~Ti~DFe~lc~~~~-i~I~~~~~~~ 169 (193)
T PF07021_consen 109 FPNFGH------------WRNR----LQLLLRGRMPVTK--ALPYEWYDTPNIHLCTIKDFEDLCRELG-IRIEERVFLD 169 (193)
T ss_pred ecChHH------------HHHH----HHHHhcCCCCCCC--CCCCcccCCCCcccccHHHHHHHHHHCC-CEEEEEEEEc
Confidence 875321 2111 2333446665443 3334444 469999999999998 8887766654
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0011 Score=61.68 Aligned_cols=87 Identities=21% Similarity=0.225 Sum_probs=47.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCc-hhhHhhcCCCCccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGND-FNTLFQTMPPSRKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~ND-Fn~lf~~l~~~~~~f~~gv 139 (373)
++..+|||+|||++..+..+ .. .+.|.-=||...+ += ..+=++-|
T Consensus 71 ~~~~viaD~GCGdA~la~~~--------~~-----------------~~~V~SfDLva~n~~V---------tacdia~v 116 (219)
T PF05148_consen 71 PKSLVIADFGCGDAKLAKAV--------PN-----------------KHKVHSFDLVAPNPRV---------TACDIANV 116 (219)
T ss_dssp -TTS-EEEES-TT-HHHHH----------S--------------------EEEEESS-SSTTE---------EES-TTS-
T ss_pred CCCEEEEECCCchHHHHHhc--------cc-----------------CceEEEeeccCCCCCE---------EEecCccC
Confidence 45689999999998777322 11 1245555665422 10 01112334
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
| ++++|+|+++.+-+|.= .||..||+--.+=|||
T Consensus 117 P-------L~~~svDv~VfcLSLMG---------------------------------------Tn~~~fi~EA~RvLK~ 150 (219)
T PF05148_consen 117 P-------LEDESVDVAVFCLSLMG---------------------------------------TNWPDFIREANRVLKP 150 (219)
T ss_dssp S---------TT-EEEEEEES---S---------------------------------------S-HHHHHHHHHHHEEE
T ss_pred c-------CCCCceeEEEEEhhhhC---------------------------------------CCcHHHHHHHHheecc
Confidence 4 69999999998877653 2778899999999999
Q ss_pred CCeEEEEe
Q 017363 220 GGLIVFVL 227 (373)
Q Consensus 220 GG~lvl~~ 227 (373)
||.|.+.=
T Consensus 151 ~G~L~IAE 158 (219)
T PF05148_consen 151 GGILKIAE 158 (219)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99998753
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0067 Score=58.92 Aligned_cols=23 Identities=22% Similarity=0.265 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
...|++.-.+-|+|||++++.+.
T Consensus 230 ~~~il~~a~~~L~~gG~l~~e~g 252 (284)
T TIGR03533 230 VRRILAEAADHLNENGVLVVEVG 252 (284)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 45688888899999999998875
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.001 Score=62.27 Aligned_cols=124 Identities=13% Similarity=0.166 Sum_probs=65.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.... +..+++..|.-..-....=+.+. -.+--+.
T Consensus 88 ~~~ilDig~G~G~~~~~l~~~~----------------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~--- 142 (251)
T TIGR03534 88 PLRVLDLGTGSGAIALALAKER----------------------PDARVTAVDISPEALAVARKNAARLGLDNVTFL--- 142 (251)
T ss_pred CCeEEEEeCcHhHHHHHHHHHC----------------------CCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE---
Confidence 4689999999998888774321 12256666654332222211111 0111122
Q ss_pred CcccccCCCCCCcceEEEccCcccccccc---hhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKI---SKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~---P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+.+.. .+|++++|+++|+--.+..+.. +..+.... | ..... + ......++..|++.-.+.
T Consensus 143 ~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~e-~----~~~~~-~---------~~~~~~~~~~~i~~~~~~ 206 (251)
T TIGR03534 143 QSDWFE-PLPGGKFDLIVSNPPYIPEADIHLLDPEVRFHE-P----RLALF-G---------GEDGLDFYRRIIAQAPRL 206 (251)
T ss_pred ECchhc-cCcCCceeEEEECCCCCchhhhhhcChhhhhcC-C----HHHHc-C---------CCcHHHHHHHHHHHHHHh
Confidence 233333 3577899999997655543321 11111000 0 00000 0 011223566899999999
Q ss_pred hccCCeEEEEe
Q 017363 217 LVPGGLIVFVL 227 (373)
Q Consensus 217 L~pGG~lvl~~ 227 (373)
|+|||.+++..
T Consensus 207 L~~gG~~~~~~ 217 (251)
T TIGR03534 207 LKPGGWLLLEI 217 (251)
T ss_pred cccCCEEEEEE
Confidence 99999998854
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.002 Score=60.96 Aligned_cols=74 Identities=23% Similarity=0.187 Sum_probs=46.0
Q ss_pred HHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHH
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIE 286 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie 286 (373)
..|+++.++-+||||.|+++..-|.--.. ....-..+-+++ ++-.|.-+-++ +-.++|+...+.
T Consensus 141 ~~~~~~c~~lvkP~G~lf~STinrt~ka~------~~~i~~ae~vl~-~vP~gTH~~~k---------~irp~El~~~~~ 204 (243)
T COG2227 141 ESFLRACAKLVKPGGILFLSTINRTLKAY------LLAIIGAEYVLR-IVPKGTHDYRK---------FIKPAELIRWLL 204 (243)
T ss_pred HHHHHHHHHHcCCCcEEEEeccccCHHHH------HHHHHHHHHHHH-hcCCcchhHHH---------hcCHHHHHHhcc
Confidence 46999999999999999999987542100 001122233333 56666544333 235778888777
Q ss_pred hcCceEEeEEE
Q 017363 287 RNGCFRIERMD 297 (373)
Q Consensus 287 ~~gsF~I~~le 297 (373)
..+ |++....
T Consensus 205 ~~~-~~~~~~~ 214 (243)
T COG2227 205 GAN-LKIIDRK 214 (243)
T ss_pred cCC-ceEEeec
Confidence 766 6666554
|
|
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00043 Score=71.40 Aligned_cols=106 Identities=22% Similarity=0.286 Sum_probs=60.0
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeecc
Q 017363 60 TCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGV 139 (373)
Q Consensus 60 ~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gv 139 (373)
.+...+++|+|||+|.....+++.=| ..+++-.+|--. .+.++ .. . +-+ -+.
T Consensus 115 ~g~iR~~LDvGcG~aSF~a~l~~r~V---------------------~t~s~a~~d~~~-~qvqf-al-e--RGv--pa~ 166 (506)
T PF03141_consen 115 GGGIRTALDVGCGVASFGAYLLERNV---------------------TTMSFAPNDEHE-AQVQF-AL-E--RGV--PAM 166 (506)
T ss_pred CCceEEEEeccceeehhHHHHhhCCc---------------------eEEEcccccCCc-hhhhh-hh-h--cCc--chh
Confidence 46678899999999998887743221 122333332221 11111 11 1 111 011
Q ss_pred Cccc-ccCC-CCCCcceEEEccCccc-ccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSF-HGRL-FPKSSLHFANSSSSLN-WLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSF-y~rl-fP~~Svd~~~Ss~alH-WLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
-+++ -+|| ||++++|++||+-|+. |.+.- | + +|----+=
T Consensus 167 ~~~~~s~rLPfp~~~fDmvHcsrc~i~W~~~~--------------g-~-----------------------~l~evdRv 208 (506)
T PF03141_consen 167 IGVLGSQRLPFPSNAFDMVHCSRCLIPWHPND--------------G-F-----------------------LLFEVDRV 208 (506)
T ss_pred hhhhccccccCCccchhhhhcccccccchhcc--------------c-c-----------------------eeehhhhh
Confidence 1122 2444 5999999999999986 85532 1 1 22222367
Q ss_pred hccCCeEEEEeccCC
Q 017363 217 LVPGGLIVFVLFSLP 231 (373)
Q Consensus 217 L~pGG~lvl~~~g~~ 231 (373)
|+|||+++++-+-..
T Consensus 209 LRpGGyfv~S~ppv~ 223 (506)
T PF03141_consen 209 LRPGGYFVLSGPPVY 223 (506)
T ss_pred hccCceEEecCCccc
Confidence 999999999887543
|
; GO: 0008168 methyltransferase activity |
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0045 Score=57.87 Aligned_cols=134 Identities=19% Similarity=0.273 Sum_probs=79.3
Q ss_pred CCceEEeeecCCCCcccHHHH-------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc
Q 017363 61 CGTFKLADFGCSVGPNTFIAV-------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT 127 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~-------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~ 127 (373)
.+..+.+|.|||.|+-|-.++ ...++..++.....
T Consensus 54 ~~~~~alDcGAGIGRVTk~lLl~~f~~VDlVEp~~~Fl~~a~~~l~~~-------------------------------- 101 (218)
T PF05891_consen 54 PKFNRALDCGAGIGRVTKGLLLPVFDEVDLVEPVEKFLEQAKEYLGKD-------------------------------- 101 (218)
T ss_dssp ---SEEEEET-TTTHHHHHTCCCC-SEEEEEES-HHHHHHHHHHTCCG--------------------------------
T ss_pred CCcceEEecccccchhHHHHHHHhcCEeEEeccCHHHHHHHHHHhccc--------------------------------
Confidence 458999999999999997553 33444333322110
Q ss_pred CCCCccceeeccCcccccCCCCC-CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcH
Q 017363 128 MPPSRKYFAFGVPGSFHGRLFPK-SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDT 206 (373)
Q Consensus 128 l~~~~~~f~~gvpgSFy~rlfP~-~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~ 206 (373)
.+.-..+|..|. +..-|+ +..|++|.-||+..|.. .|+
T Consensus 102 ~~~v~~~~~~gL-----Q~f~P~~~~YDlIW~QW~lghLTD------------------------------------~dl 140 (218)
T PF05891_consen 102 NPRVGEFYCVGL-----QDFTPEEGKYDLIWIQWCLGHLTD------------------------------------EDL 140 (218)
T ss_dssp GCCEEEEEES-G-----GG----TT-EEEEEEES-GGGS-H------------------------------------HHH
T ss_pred CCCcceEEecCH-----hhccCCCCcEeEEEehHhhccCCH------------------------------------HHH
Confidence 001134566665 334464 79999999999888773 389
Q ss_pred HHHHHHHHhhhccCCeEEEEe-ccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHH
Q 017363 207 EAFLNARAHELVPGGLIVFVL-FSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAII 285 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~-~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~i 285 (373)
-.||+...+.|+|||.+++== .+.......+. .++- ..||.+.++.++
T Consensus 141 v~fL~RCk~~L~~~G~IvvKEN~~~~~~~~~D~------------------~DsS-------------vTRs~~~~~~lF 189 (218)
T PF05891_consen 141 VAFLKRCKQALKPNGVIVVKENVSSSGFDEFDE------------------EDSS-------------VTRSDEHFRELF 189 (218)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEESSSEEEEET------------------TTTE-------------EEEEHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEEecCCCCCCcccCC------------------ccCe-------------eecCHHHHHHHH
Confidence 999999999999999888732 22211101110 1122 578999999999
Q ss_pred HhcCceEEeEEEEe
Q 017363 286 ERNGCFRIERMDKL 299 (373)
Q Consensus 286 e~~gsF~I~~le~~ 299 (373)
+++| ++|.+-+..
T Consensus 190 ~~AG-l~~v~~~~Q 202 (218)
T PF05891_consen 190 KQAG-LRLVKEEKQ 202 (218)
T ss_dssp HHCT--EEEEEEE-
T ss_pred HHcC-CEEEEeccc
Confidence 9999 887776654
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0034 Score=51.61 Aligned_cols=24 Identities=42% Similarity=0.607 Sum_probs=21.1
Q ss_pred cHHHHHHHHHhhhccCCeEEEEec
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+...|++.-.+-|+|||.+++.+.
T Consensus 93 ~~~~~~~~~~~~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 93 LYSRFLEAAARLLKPGGVLVFITP 116 (117)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 566899999999999999999864
|
... |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.032 Score=49.52 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+..|++.-.+-|+|||.+++...
T Consensus 127 ~~~~i~~~~~~Lk~gG~~~~~~~ 149 (188)
T PRK14968 127 IDRFLDEVGRYLKPGGRILLLQS 149 (188)
T ss_pred HHHHHHHHHHhcCCCeEEEEEEc
Confidence 56789999999999999988753
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0043 Score=60.27 Aligned_cols=23 Identities=13% Similarity=0.225 Sum_probs=17.4
Q ss_pred HHHHHHHhhhccCCeEEEEeccC
Q 017363 208 AFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
.++..-.+-|+|||+++++....
T Consensus 240 ~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 240 ELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeCcH
Confidence 45556668899999999876653
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.011 Score=56.27 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=14.6
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
.-+|+|+|||+|..++.+
T Consensus 120 ~~~VLDiGcGsG~l~i~~ 137 (250)
T PRK00517 120 GKTVLDVGCGSGILAIAA 137 (250)
T ss_pred CCEEEEeCCcHHHHHHHH
Confidence 468999999999776644
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0091 Score=58.46 Aligned_cols=104 Identities=14% Similarity=0.080 Sum_probs=60.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC------CCccce
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP------PSRKYF 135 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~------~~~~~f 135 (373)
.+-+|||+|||.|+.|.+++..- . .|.-++.--|.-. +-..+.+.+- ..+--|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~------~--------------~p~~~~~giD~d~-~ai~~Ar~~~~~~~gL~~rV~F 181 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKH------H--------------LPTTSFHNFDIDP-SANDVARRLVSSDPDLSKRMFF 181 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHh------c--------------CCCCEEEEEeCCH-HHHHHHHHHhhhccCccCCcEE
Confidence 56899999999999877664321 0 1111344444432 1122222221 112346
Q ss_pred eeccCcccccCCCC-CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 136 AFGVPGSFHGRLFP-KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 136 ~~gvpgSFy~rlfP-~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
..+.... +.+ .+.+|++|+. ++|-..+.+ =...|+.-+
T Consensus 182 ~~~Da~~----~~~~l~~FDlVF~~-ALi~~dk~~------------------------------------k~~vL~~l~ 220 (296)
T PLN03075 182 HTADVMD----VTESLKEYDVVFLA-ALVGMDKEE------------------------------------KVKVIEHLG 220 (296)
T ss_pred EECchhh----cccccCCcCEEEEe-ccccccccc------------------------------------HHHHHHHHH
Confidence 5555433 222 3679999999 665443221 124677777
Q ss_pred hhhccCCeEEEEe
Q 017363 215 HELVPGGLIVFVL 227 (373)
Q Consensus 215 ~EL~pGG~lvl~~ 227 (373)
+-|+|||.+++-+
T Consensus 221 ~~LkPGG~Lvlr~ 233 (296)
T PLN03075 221 KHMAPGALLMLRS 233 (296)
T ss_pred HhcCCCcEEEEec
Confidence 8999999999887
|
|
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0057 Score=60.84 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=34.3
Q ss_pred CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 151 SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 151 ~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..+|+|-+-.|||..=.- ++-.+.||+.-++-|+|||+|+.+++.
T Consensus 144 ~~FDvVScQFalHY~Fes----------------------------------e~~ar~~l~Nvs~~Lk~GG~FIgT~~d 188 (331)
T PF03291_consen 144 RKFDVVSCQFALHYAFES----------------------------------EEKARQFLKNVSSLLKPGGYFIGTTPD 188 (331)
T ss_dssp S-EEEEEEES-GGGGGSS----------------------------------HHHHHHHHHHHHHTEEEEEEEEEEEE-
T ss_pred CCcceeehHHHHHHhcCC----------------------------------HHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 589999999999984321 123347999999999999999999974
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0072 Score=59.45 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhccCCeEEEEec
Q 017363 207 EAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
..|++.-.+-|+|||++++...
T Consensus 243 ~~i~~~a~~~L~pgG~l~~E~g 264 (307)
T PRK11805 243 RRILAEAPDYLTEDGVLVVEVG 264 (307)
T ss_pred HHHHHHHHHhcCCCCEEEEEEC
Confidence 4588888888999999998754
|
|
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.042 Score=54.64 Aligned_cols=196 Identities=19% Similarity=0.188 Sum_probs=115.8
Q ss_pred hhcCcccc-ccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHH
Q 017363 7 NVLPGSFP-MVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNII 85 (373)
Q Consensus 7 ~~~~~~~~-M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii 85 (373)
++...+.. |-||-|..+|.-+-..|+.. .....++.+.+.+.+. . | ...-..+|.|-|.|..+-.+++
T Consensus 129 ~~~~~~~G~~l~~~~~~~~~~~~~~~~sm-~~l~~~~~~~il~~~~-G-f-----~~v~~avDvGgGiG~v~k~ll~--- 197 (342)
T KOG3178|consen 129 DAFATAHGMMLGGYGGADERFSKDFNGSM-SFLSTLVMKKILEVYT-G-F-----KGVNVAVDVGGGIGRVLKNLLS--- 197 (342)
T ss_pred cCCccccchhhhhhcccccccHHHHHHHH-HHHHHHHHHhhhhhhc-c-c-----ccCceEEEcCCcHhHHHHHHHH---
Confidence 44556666 67776655554444444443 3333344433333221 1 1 3578899999999998877744
Q ss_pred HHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccce---eeccCcccccCCCCCCcceEEEccCcc
Q 017363 86 EAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYF---AFGVPGSFHGRLFPKSSLHFANSSSSL 162 (373)
Q Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f---~~gvpgSFy~rlfP~~Svd~~~Ss~al 162 (373)
++ |.+..+-=|+|.=. .. ..++ +--+.|-+++- .|++- ++|.-|+|
T Consensus 198 -----~f--------------p~ik~infdlp~v~-----~~----a~~~~~gV~~v~gdmfq~-~P~~d--aI~mkWiL 246 (342)
T KOG3178|consen 198 -----KY--------------PHIKGINFDLPFVL-----AA----APYLAPGVEHVAGDMFQD-TPKGD--AIWMKWIL 246 (342)
T ss_pred -----hC--------------CCCceeecCHHHHH-----hh----hhhhcCCcceeccccccc-CCCcC--eEEEEeec
Confidence 22 33455555665311 11 1122 34455666777 77765 99999999
Q ss_pred cccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccC--CC
Q 017363 163 NWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMID--SN 240 (373)
Q Consensus 163 HWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~--~~ 240 (373)
|-+. .+|...||+..++-|+|||.+++.=.-.+++...+. ..
T Consensus 247 hdwt------------------------------------DedcvkiLknC~~sL~~~GkIiv~E~V~p~e~~~dd~~s~ 290 (342)
T KOG3178|consen 247 HDWT------------------------------------DEDCVKILKNCKKSLPPGGKIIVVENVTPEEDKFDDIDSS 290 (342)
T ss_pred ccCC------------------------------------hHHHHHHHHHHHHhCCCCCEEEEEeccCCCCCCccccccc
Confidence 8422 248889999999999999999887553332221111 11
Q ss_pred chhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 241 GGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 241 ~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
.....+++..+.. .-|+ -|+.+|++..+.++| |.+-.+-.
T Consensus 291 v~~~~d~lm~~~~---~~Gk--------------ert~~e~q~l~~~~g-F~~~~~~~ 330 (342)
T KOG3178|consen 291 VTRDMDLLMLTQT---SGGK--------------ERTLKEFQALLPEEG-FPVCMVAL 330 (342)
T ss_pred eeehhHHHHHHHh---ccce--------------eccHHHHHhcchhhc-CceeEEEe
Confidence 2223344444332 3364 689999999999999 87654443
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.008 Score=55.86 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=89.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHh-hcC----CCCccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF-QTM----PPSRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf-~~l----~~~~~~f~~ 137 (373)
-.-++++|||+|+|=-.. . . .|--.|.+-|=-.|- -... ++. |..-.+|+.
T Consensus 77 K~~vLEvgcGtG~Nfkfy------------~-~----------~p~~svt~lDpn~~m-ee~~~ks~~E~k~~~~~~fvv 132 (252)
T KOG4300|consen 77 KGDVLEVGCGTGANFKFY------------P-W----------KPINSVTCLDPNEKM-EEIADKSAAEKKPLQVERFVV 132 (252)
T ss_pred ccceEEecccCCCCcccc------------c-C----------CCCceEEEeCCcHHH-HHHHHHHHhhccCcceEEEEe
Confidence 466799999999995433 0 0 122255555533222 2221 111 111235888
Q ss_pred ccCcccccCCC--CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 138 GVPGSFHGRLF--PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 138 gvpgSFy~rlf--P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
|.+ +++. |+.|+|.+++..+|.=. +|-..-|+.-.+
T Consensus 133 a~g----e~l~~l~d~s~DtVV~TlvLCSv--------------------------------------e~~~k~L~e~~r 170 (252)
T KOG4300|consen 133 ADG----ENLPQLADGSYDTVVCTLVLCSV--------------------------------------EDPVKQLNEVRR 170 (252)
T ss_pred ech----hcCcccccCCeeeEEEEEEEecc--------------------------------------CCHHHHHHHHHH
Confidence 887 5555 99999999988766421 233355666678
Q ss_pred hhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 216 ELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 216 EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
-|+|||++++.=-|+..-.. ...+++...+-+-.+...|-. ..+ |.-+.+++.. |++..
T Consensus 171 lLRpgG~iifiEHva~~y~~-----~n~i~q~v~ep~~~~~~dGC~------------ltr---d~~e~Leda~-f~~~~ 229 (252)
T KOG4300|consen 171 LLRPGGRIIFIEHVAGEYGF-----WNRILQQVAEPLWHLESDGCV------------LTR---DTGELLEDAE-FSIDS 229 (252)
T ss_pred hcCCCcEEEEEecccccchH-----HHHHHHHHhchhhheeccceE------------Eeh---hHHHHhhhcc-cccch
Confidence 99999999998777664321 223444444444445566631 222 3334566655 88888
Q ss_pred EEEecCC
Q 017363 296 MDKLPDP 302 (373)
Q Consensus 296 le~~~~~ 302 (373)
.+.+...
T Consensus 230 ~kr~~~~ 236 (252)
T KOG4300|consen 230 CKRFNFG 236 (252)
T ss_pred hhcccCC
Confidence 7766543
|
|
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.007 Score=58.62 Aligned_cols=25 Identities=16% Similarity=0.227 Sum_probs=20.6
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+...++..-.+-|+|||.|++.+..
T Consensus 222 ~~~~ii~~a~~~L~~gG~l~~e~g~ 246 (284)
T TIGR00536 222 ILRQIIELAPDYLKPNGFLVCEIGN 246 (284)
T ss_pred HHHHHHHHHHHhccCCCEEEEEECc
Confidence 4557888888899999999888753
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0071 Score=57.57 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=19.4
Q ss_pred cHHHHHHHHHhhhccCCeEEEEe
Q 017363 205 DTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
++..|++.-.+-|+|||++++..
T Consensus 216 ~~~~~~~~~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 216 FYRRIIEQAPRYLKPGGWLLLEI 238 (275)
T ss_pred HHHHHHHHHHHhcccCCEEEEEE
Confidence 55678888889999999999855
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.015 Score=56.54 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=62.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CC--------CC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MP--------PS 131 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~--------~~ 131 (373)
+++-+|+|+|||+|..+..++.. +..-+|...|+-.+= -.+.+. ++ ..
T Consensus 75 ~~p~~VL~iG~G~G~~~~~~l~~----------------------~~~~~V~~VEid~~v-v~~a~~~~~~~~~~~~~d~ 131 (283)
T PRK00811 75 PNPKRVLIIGGGDGGTLREVLKH----------------------PSVEKITLVEIDERV-VEVCRKYLPEIAGGAYDDP 131 (283)
T ss_pred CCCCEEEEEecCchHHHHHHHcC----------------------CCCCEEEEEeCCHHH-HHHHHHHhHHhccccccCC
Confidence 35679999999999998776321 000144444443211 111111 11 11
Q ss_pred ccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHH
Q 017363 132 RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLN 211 (373)
Q Consensus 132 ~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~ 211 (373)
+--+..+.+..|-.+ +++++|++++-.+-+|. .+.. -|. ..|++
T Consensus 132 rv~v~~~Da~~~l~~--~~~~yDvIi~D~~dp~~--~~~~-------------------------l~t-------~ef~~ 175 (283)
T PRK00811 132 RVELVIGDGIKFVAE--TENSFDVIIVDSTDPVG--PAEG-------------------------LFT-------KEFYE 175 (283)
T ss_pred ceEEEECchHHHHhh--CCCcccEEEECCCCCCC--chhh-------------------------hhH-------HHHHH
Confidence 223556666555444 56789999997765551 1111 111 36888
Q ss_pred HHHhhhccCCeEEEEe
Q 017363 212 ARAHELVPGGLIVFVL 227 (373)
Q Consensus 212 ~Ra~EL~pGG~lvl~~ 227 (373)
.-.+-|+|||+|++..
T Consensus 176 ~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 176 NCKRALKEDGIFVAQS 191 (283)
T ss_pred HHHHhcCCCcEEEEeC
Confidence 8889999999998753
|
|
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.024 Score=58.46 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=71.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---Cccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~gv 139 (373)
.-+|+|+|||+|..|+.+.+.. .. .-+|+-.|+-..-...+=+.+.. .+-.+..+.
T Consensus 251 g~~VLDlgaG~G~kt~~la~~~--------~~-------------~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~D 309 (445)
T PRK14904 251 GSTVLDLCAAPGGKSTFMAELM--------QN-------------RGQITAVDRYPQKLEKIRSHASALGITIIETIEGD 309 (445)
T ss_pred CCEEEEECCCCCHHHHHHHHHh--------CC-------------CcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCc
Confidence 3689999999999998774322 10 11677777765444333222211 112344454
Q ss_pred CcccccCCCCCCcceEEEc----cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 140 PGSFHGRLFPKSSLHFANS----SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~S----s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
... +.|++++|.++. +..-+|- +.|+.... ..++..+. ..+....+|..-++
T Consensus 310 a~~----~~~~~~fD~Vl~D~Pcsg~g~~~-r~p~~~~~---------------~~~~~~~~----l~~~q~~iL~~a~~ 365 (445)
T PRK14904 310 ARS----FSPEEQPDAILLDAPCTGTGVLG-RRAELRWK---------------LTPEKLAE----LVGLQAELLDHAAS 365 (445)
T ss_pred ccc----cccCCCCCEEEEcCCCCCcchhh-cCcchhhc---------------CCHHHHHH----HHHHHHHHHHHHHH
Confidence 433 336678999983 3333332 23322110 11222222 23355679999999
Q ss_pred hhccCCeEEEEeccCC
Q 017363 216 ELVPGGLIVFVLFSLP 231 (373)
Q Consensus 216 EL~pGG~lvl~~~g~~ 231 (373)
-|+|||+|+.++....
T Consensus 366 ~lkpgG~lvystcs~~ 381 (445)
T PRK14904 366 LLKPGGVLVYATCSIE 381 (445)
T ss_pred hcCCCcEEEEEeCCCC
Confidence 9999999999887653
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0091 Score=57.19 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=33.9
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
++++|+|+++.+-+|.= .||..|++--.+=|+|||.+.+.=
T Consensus 224 l~d~svDvaV~CLSLMg---------------------------------------tn~~df~kEa~RiLk~gG~l~IAE 264 (325)
T KOG3045|consen 224 LEDESVDVAVFCLSLMG---------------------------------------TNLADFIKEANRILKPGGLLYIAE 264 (325)
T ss_pred CccCcccEEEeeHhhhc---------------------------------------ccHHHHHHHHHHHhccCceEEEEe
Confidence 68999999988766642 277889999999999999998753
|
|
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.045 Score=56.17 Aligned_cols=125 Identities=12% Similarity=0.080 Sum_probs=65.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
.-+|+|+|||+|.-|+.+.+.. . .-.|+-.|.-..--..+=+.+.. ....+..+..
T Consensus 245 g~~VLDlgaG~G~~t~~la~~~--------~--------------~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~ 302 (427)
T PRK10901 245 GERVLDACAAPGGKTAHILELA--------P--------------QAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA 302 (427)
T ss_pred CCEEEEeCCCCChHHHHHHHHc--------C--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc
Confidence 4689999999999998774432 0 01566666654322222122211 0112333333
Q ss_pred cccccCCCCCCcceEEEccC---cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 141 GSFHGRLFPKSSLHFANSSS---SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~---alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
... ...++++++|.+++.. ...-+.+.|... |. ..++..+ .+.+....+|..-++-|
T Consensus 303 ~~~-~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~-------~~--------~~~~~l~----~l~~~q~~iL~~a~~~L 362 (427)
T PRK10901 303 RDP-AQWWDGQPFDRILLDAPCSATGVIRRHPDIK-------WL--------RRPEDIA----ALAALQSEILDALWPLL 362 (427)
T ss_pred ccc-hhhcccCCCCEEEECCCCCcccccccCcccc-------cc--------CCHHHHH----HHHHHHHHHHHHHHHhc
Confidence 211 1224567899998432 222222333211 11 0122222 22345567898888999
Q ss_pred ccCCeEEEEecc
Q 017363 218 VPGGLIVFVLFS 229 (373)
Q Consensus 218 ~pGG~lvl~~~g 229 (373)
+|||+|+.++..
T Consensus 363 kpGG~lvystcs 374 (427)
T PRK10901 363 KPGGTLLYATCS 374 (427)
T ss_pred CCCCEEEEEeCC
Confidence 999999988764
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.019 Score=53.52 Aligned_cols=19 Identities=11% Similarity=0.197 Sum_probs=15.2
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
-.+|+|+|||+|.+|.++.
T Consensus 73 g~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 73 GDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp T-EEEEES-TTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4799999999999998874
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=59.87 Aligned_cols=127 Identities=9% Similarity=0.067 Sum_probs=74.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---Cccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~gv 139 (373)
.-+|+|+|||+|.-|+.+.... . +.-+|+-.|+..+--..+=+.+.. ..-.+..+.
T Consensus 238 g~~VLD~cagpGgkt~~la~~~--------~-------------~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~D 296 (431)
T PRK14903 238 GLRVLDTCAAPGGKTTAIAELM--------K-------------DQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIAD 296 (431)
T ss_pred CCEEEEeCCCccHHHHHHHHHc--------C-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECc
Confidence 3589999999999998874322 1 112677777754333222222211 111233443
Q ss_pred CcccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
...+- . +.++++|.|++ ++.+..+.+.|..... .+++.. .+..+.....|..-++-
T Consensus 297 a~~l~-~-~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~---------------~~~~~~----~~l~~~Q~~iL~~a~~~ 355 (431)
T PRK14903 297 AERLT-E-YVQDTFDRILVDAPCTSLGTARNHPEVLRR---------------VNKEDF----KKLSEIQLRIVSQAWKL 355 (431)
T ss_pred hhhhh-h-hhhccCCEEEECCCCCCCccccCChHHHHh---------------CCHHHH----HHHHHHHHHHHHHHHHh
Confidence 32221 0 23567899986 5667777776654321 112222 23344557889999999
Q ss_pred hccCCeEEEEeccCC
Q 017363 217 LVPGGLIVFVLFSLP 231 (373)
Q Consensus 217 L~pGG~lvl~~~g~~ 231 (373)
|+|||+|+.++....
T Consensus 356 LkpGG~LvYsTCs~~ 370 (431)
T PRK14903 356 LEKGGILLYSTCTVT 370 (431)
T ss_pred cCCCCEEEEEECCCC
Confidence 999999999988754
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.016 Score=53.01 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
...+|+.-.+-|+|||++++...
T Consensus 124 ~~~~l~~~~~~LkpgG~lv~~~~ 146 (198)
T PRK00377 124 LKEIISASWEIIKKGGRIVIDAI 146 (198)
T ss_pred HHHHHHHHHHHcCCCcEEEEEee
Confidence 34577777789999999987553
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.024 Score=52.78 Aligned_cols=20 Identities=10% Similarity=0.165 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||||.+|..+.
T Consensus 72 ~g~~VLEIGtGsGY~aAvla 91 (209)
T COG2518 72 PGDRVLEIGTGSGYQAAVLA 91 (209)
T ss_pred CCCeEEEECCCchHHHHHHH
Confidence 45899999999999998773
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.077 Score=48.23 Aligned_cols=25 Identities=32% Similarity=0.320 Sum_probs=20.0
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++..+|+.-.+-|+|||+|++....
T Consensus 120 ~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 120 PIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeec
Confidence 4557788777889999999998753
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.046 Score=56.08 Aligned_cols=128 Identities=13% Similarity=0.041 Sum_probs=71.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCc-cceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSR-KYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~-~~f~~gvpg 141 (373)
..+|+|+|||+|.-|+.+...+ . .-+|+-.|.-.+-...+-+++.... .+-+..+.+
T Consensus 239 g~~VLDlcag~G~kt~~la~~~--------~--------------~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~ 296 (426)
T TIGR00563 239 EETILDACAAPGGKTTHILELA--------P--------------QAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG 296 (426)
T ss_pred CCeEEEeCCCccHHHHHHHHHc--------C--------------CCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 3699999999999999774322 1 1157777775444333333332110 111111111
Q ss_pred cccc--CCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 142 SFHG--RLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 142 SFy~--rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.-.+ ...+.+++|.+++ ++++.-+.+.|+... . . .++..+ +..+.-..+|..=++-
T Consensus 297 d~~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~-------~-------~-~~~~~~----~l~~lQ~~lL~~a~~~ 357 (426)
T TIGR00563 297 DGRGPSQWAENEQFDRILLDAPCSATGVIRRHPDIKW-------L-------R-KPRDIA----ELAELQSEILDAIWPL 357 (426)
T ss_pred ccccccccccccccCEEEEcCCCCCCcccccCcchhh-------c-------C-CHHHHH----HHHHHHHHHHHHHHHh
Confidence 1111 1125678999986 455555555664321 1 1 122222 2233456788888899
Q ss_pred hccCCeEEEEeccCC
Q 017363 217 LVPGGLIVFVLFSLP 231 (373)
Q Consensus 217 L~pGG~lvl~~~g~~ 231 (373)
|+|||+|+.++..-.
T Consensus 358 LkpgG~lvystcs~~ 372 (426)
T TIGR00563 358 LKTGGTLVYATCSVL 372 (426)
T ss_pred cCCCcEEEEEeCCCC
Confidence 999999999987653
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.018 Score=60.52 Aligned_cols=125 Identities=12% Similarity=0.045 Sum_probs=63.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCCCCc-cceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMPPSR-KYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~~~~-~~f~~gvp 140 (373)
..+|+|+|||+|..++.+.... |..+|+..|+...- -.+.+ ++.... .--+.-+-
T Consensus 139 ~~~VLDlG~GsG~iai~la~~~----------------------p~~~v~avDis~~a-l~~A~~N~~~~~l~~~v~~~~ 195 (506)
T PRK01544 139 FLNILELGTGSGCIAISLLCEL----------------------PNANVIATDISLDA-IEVAKSNAIKYEVTDRIQIIH 195 (506)
T ss_pred CCEEEEccCchhHHHHHHHHHC----------------------CCCeEEEEECCHHH-HHHHHHHHHHcCCccceeeee
Confidence 4689999999999998773321 22367777774311 11111 110000 00111223
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhh---hhcC-CCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKE---ILDS-RSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~---~~~~-~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+++++. +|.+++|+++|+--....+..+.. +.+. ...++- +.+.-.+ .+..+++.-.+-
T Consensus 196 ~D~~~~-~~~~~fDlIvsNPPYi~~~~~~~l~~~v~~~EP~~AL~--------gg~dGl~--------~~~~il~~a~~~ 258 (506)
T PRK01544 196 SNWFEN-IEKQKFDFIVSNPPYISHSEKSEMAIETINYEPSIALF--------AEEDGLQ--------AYFIIAENAKQF 258 (506)
T ss_pred cchhhh-CcCCCccEEEECCCCCCchhhhhcCchhhccCcHHHhc--------CCccHHH--------HHHHHHHHHHHh
Confidence 444433 356789999998544443322211 1100 000000 0111122 244688888889
Q ss_pred hccCCeEEEEe
Q 017363 217 LVPGGLIVFVL 227 (373)
Q Consensus 217 L~pGG~lvl~~ 227 (373)
|+|||.+++..
T Consensus 259 L~~gG~l~lEi 269 (506)
T PRK01544 259 LKPNGKIILEI 269 (506)
T ss_pred ccCCCEEEEEE
Confidence 99999999875
|
|
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.039 Score=56.89 Aligned_cols=125 Identities=15% Similarity=0.079 Sum_probs=65.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
.-+|+|+|||+|.-|+.+.+.. . +.-+|+-.|+-.+--..+-+++. -..--+..+.
T Consensus 251 g~~VLDlgaG~G~~t~~la~~~--------~-------------~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D 309 (444)
T PRK14902 251 GDTVLDACAAPGGKTTHIAELL--------K-------------NTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALD 309 (444)
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--------C-------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999774432 0 11156667765433222222221 1111233333
Q ss_pred CcccccCCCCCCcceEEEcc---CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANSS---SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss---~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
...+- .-++ +++|++++. +.+..+++.|.... .+ .+...+ ...+--..+|+.-.+-
T Consensus 310 ~~~~~-~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~-------~~--------~~~~~~----~l~~~q~~iL~~a~~~ 368 (444)
T PRK14902 310 ARKVH-EKFA-EKFDKILVDAPCSGLGVIRRKPDIKY-------NK--------TKEDIE----SLQEIQLEILESVAQY 368 (444)
T ss_pred ccccc-chhc-ccCCEEEEcCCCCCCeeeccCcchhh-------cC--------CHHHHH----HHHHHHHHHHHHHHHH
Confidence 32211 1123 679999874 33444444443221 11 111111 1222335688888899
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||+|+.++..
T Consensus 369 LkpGG~lvystcs 381 (444)
T PRK14902 369 LKKGGILVYSTCT 381 (444)
T ss_pred cCCCCEEEEEcCC
Confidence 9999999976654
|
|
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.036 Score=56.76 Aligned_cols=22 Identities=14% Similarity=0.372 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhhccCCeEEEEe
Q 017363 206 TEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
+.++++.-.+-|+|||.+++..
T Consensus 360 yr~Ii~~a~~~LkpgG~lilEi 381 (423)
T PRK14966 360 IRTLAQGAPDRLAEGGFLLLEH 381 (423)
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 4467777778899999988765
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.02 Score=56.17 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
+..+++|+|||||-.|+...
T Consensus 162 ~g~~vlDvGcGSGILaIAa~ 181 (300)
T COG2264 162 KGKTVLDVGCGSGILAIAAA 181 (300)
T ss_pred CCCEEEEecCChhHHHHHHH
Confidence 46899999999999998774
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.19 Score=49.76 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhhccCCeEEEEeccCC
Q 017363 206 TEAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
...+|+.-++-|+|||++++.++...
T Consensus 273 ~~~~l~~~~r~Lk~gG~lv~~~~~~~ 298 (329)
T TIGR01177 273 YERSLEEFHEVLKSEGWIVYAVPTRI 298 (329)
T ss_pred HHHHHHHHHHHccCCcEEEEEEcCCC
Confidence 34688888889999999999987643
|
This family is found exclusively in the Archaea. |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.083 Score=54.37 Aligned_cols=26 Identities=27% Similarity=0.411 Sum_probs=21.7
Q ss_pred hcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 204 NDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+.-..+|..-++-|||||+||.++..
T Consensus 361 ~~Q~~iL~~a~~~lkpgG~lvystcs 386 (434)
T PRK14901 361 PLQAELLESLAPLLKPGGTLVYATCT 386 (434)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 34578899999999999999987755
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.081 Score=51.82 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=59.3
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc---C--CCCcc--cee
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT---M--PPSRK--YFA 136 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~---l--~~~~~--~f~ 136 (373)
.+|||+|||-|..++.+.+. .|..++.+.|. |+..+=.. + ..... +|.
T Consensus 160 ~~vlDlGCG~Gvlg~~la~~----------------------~p~~~vtmvDv---n~~Av~~ar~Nl~~N~~~~~~v~~ 214 (300)
T COG2813 160 GKVLDLGCGYGVLGLVLAKK----------------------SPQAKLTLVDV---NARAVESARKNLAANGVENTEVWA 214 (300)
T ss_pred CcEEEeCCCccHHHHHHHHh----------------------CCCCeEEEEec---CHHHHHHHHHhHHHcCCCccEEEE
Confidence 39999999999999887321 23456666665 22222111 0 01111 233
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+-+ |+.+.. ++|+++|+=-+|==.++- ..+. .+++..=++-
T Consensus 215 s~~----~~~v~~--kfd~IisNPPfh~G~~v~----------------------~~~~-----------~~~i~~A~~~ 255 (300)
T COG2813 215 SNL----YEPVEG--KFDLIISNPPFHAGKAVV----------------------HSLA-----------QEIIAAAARH 255 (300)
T ss_pred ecc----cccccc--cccEEEeCCCccCCcchh----------------------HHHH-----------HHHHHHHHHh
Confidence 222 455555 899999885555211110 0001 1577777889
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|++||.|.++.-|
T Consensus 256 L~~gGeL~iVan~ 268 (300)
T COG2813 256 LKPGGELWIVANR 268 (300)
T ss_pred hccCCEEEEEEcC
Confidence 9999999988774
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.02 Score=52.68 Aligned_cols=111 Identities=19% Similarity=0.263 Sum_probs=65.7
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeeccCc
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGVPG 141 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gvpg 141 (373)
.++|+|||.|...+.... . .|+..++--|.-.+-.....+.+. -.+-.++.+...
T Consensus 20 l~lEIG~G~G~~l~~~A~--------~--------------~Pd~n~iGiE~~~~~v~~a~~~~~~~~l~Nv~~~~~da~ 77 (195)
T PF02390_consen 20 LILEIGCGKGEFLIELAK--------R--------------NPDINFIGIEIRKKRVAKALRKAEKRGLKNVRFLRGDAR 77 (195)
T ss_dssp EEEEET-TTSHHHHHHHH--------H--------------STTSEEEEEES-HHHHHHHHHHHHHHTTSSEEEEES-CT
T ss_pred eEEEecCCCCHHHHHHHH--------H--------------CCCCCEEEEecchHHHHHHHHHHHhhcccceEEEEccHH
Confidence 999999999998876621 1 234456666665433333322221 123356677777
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.+...++|++|++-++-++.==|-.+-- .|-|+. . ..||..-++-|+|||
T Consensus 78 ~~l~~~~~~~~v~~i~i~FPDPWpK~rH-----------~krRl~----~---------------~~fl~~~~~~L~~gG 127 (195)
T PF02390_consen 78 ELLRRLFPPGSVDRIYINFPDPWPKKRH-----------HKRRLV----N---------------PEFLELLARVLKPGG 127 (195)
T ss_dssp THHHHHSTTTSEEEEEEES-----SGGG-----------GGGSTT----S---------------HHHHHHHHHHEEEEE
T ss_pred HHHhhcccCCchheEEEeCCCCCcccch-----------hhhhcC----C---------------chHHHHHHHHcCCCC
Confidence 7788899999999999888776744221 111221 1 158888889999999
Q ss_pred eEEEEe
Q 017363 222 LIVFVL 227 (373)
Q Consensus 222 ~lvl~~ 227 (373)
.+.+.+
T Consensus 128 ~l~~~T 133 (195)
T PF02390_consen 128 ELYFAT 133 (195)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 886543
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.042 Score=54.49 Aligned_cols=19 Identities=16% Similarity=0.344 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|.+|..+.
T Consensus 81 g~~VLDIG~GtG~~a~~LA 99 (322)
T PRK13943 81 GMRVLEIGGGTGYNAAVMS 99 (322)
T ss_pred CCEEEEEeCCccHHHHHHH
Confidence 4689999999999998874
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.12 Score=49.67 Aligned_cols=24 Identities=25% Similarity=0.441 Sum_probs=20.3
Q ss_pred HHHHHHHhhhccCCeEEEEeccCC
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
.|++.-.+-|+|||+++++..+++
T Consensus 158 efl~~~~~~L~pgGvlvin~~~~~ 181 (262)
T PRK04457 158 PFFDDCRNALSSDGIFVVNLWSRD 181 (262)
T ss_pred HHHHHHHHhcCCCcEEEEEcCCCc
Confidence 688888889999999999877643
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.13 Score=49.50 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=16.9
Q ss_pred HHHHHHHhhhccCCeEEEE
Q 017363 208 AFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~ 226 (373)
.|++.-++-|+|||++++.
T Consensus 167 ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 167 EFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred HHHHHHHHHhCCCcEEEEc
Confidence 6788888999999999987
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.061 Score=51.33 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+..++..=.+-|+|||++++...
T Consensus 195 ~~~i~~~a~~~L~~gG~l~l~~~ 217 (251)
T TIGR03704 195 LRRVAAGAPDWLAPGGHLLVETS 217 (251)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 44677777888999999998864
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.094 Score=55.31 Aligned_cols=62 Identities=23% Similarity=0.274 Sum_probs=35.5
Q ss_pred HHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHH
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIE 286 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie 286 (373)
.|++.-.+-|+|||++++.... +... -+.+..+.+.|.+.|. .-..-..++|.| .++--.+.
T Consensus 396 ef~~~~~~~L~pgG~lv~~~~~-~~~~----------~~~~~~i~~~l~~~gf--~v~~~~~~vps~----g~w~f~~a 457 (521)
T PRK03612 396 EFYRLLKRRLAPDGLLVVQSTS-PYFA----------PKAFWSIEATLEAAGL--ATTPYHVNVPSF----GEWGFVLA 457 (521)
T ss_pred HHHHHHHHhcCCCeEEEEecCC-cccc----------hHHHHHHHHHHHHcCC--EEEEEEeCCCCc----chhHHHee
Confidence 4777777889999999987532 1110 1334455556666676 222223455666 45555554
|
|
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.12 Score=48.86 Aligned_cols=64 Identities=23% Similarity=0.428 Sum_probs=44.4
Q ss_pred cHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHH
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAI 284 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ 284 (373)
++..++-.-+.-|+|||.|.++.=.-++... . .+.-..+ |..+..=+++.
T Consensus 203 ~Le~~~~~aa~~L~~gGlfaFSvE~l~~~~~-------f---~l~ps~R--------------------yAH~~~YVr~~ 252 (287)
T COG4976 203 ALEGLFAGAAGLLAPGGLFAFSVETLPDDGG-------F---VLGPSQR--------------------YAHSESYVRAL 252 (287)
T ss_pred chhhHHHHHHHhcCCCceEEEEecccCCCCC-------e---ecchhhh--------------------hccchHHHHHH
Confidence 5667888889999999999998743322210 0 0111112 78888889999
Q ss_pred HHhcCceEEeEEEEe
Q 017363 285 IERNGCFRIERMDKL 299 (373)
Q Consensus 285 ie~~gsF~I~~le~~ 299 (373)
++..| |+|..++-.
T Consensus 253 l~~~G-l~~i~~~~t 266 (287)
T COG4976 253 LAASG-LEVIAIEDT 266 (287)
T ss_pred HHhcC-ceEEEeecc
Confidence 99999 988877744
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.1 Score=50.02 Aligned_cols=28 Identities=25% Similarity=0.500 Sum_probs=22.2
Q ss_pred hhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 203 KNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 203 ~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
.+....+|+.=++-|+|||+|+.++...
T Consensus 175 ~~~q~~iL~~a~~~lkpgG~lvYstcs~ 202 (264)
T TIGR00446 175 SALQKELIDSAFDALKPGGVLVYSTCSL 202 (264)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 3445668999999999999999887654
|
|
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.13 Score=50.85 Aligned_cols=63 Identities=16% Similarity=0.254 Sum_probs=43.9
Q ss_pred ccceeeccCcccccCCC-----CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcH
Q 017363 132 RKYFAFGVPGSFHGRLF-----PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDT 206 (373)
Q Consensus 132 ~~~f~~gvpgSFy~rlf-----P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~ 206 (373)
...|++|. +|+++|. ++-++|++=|=.|+|+-=.- ..-.
T Consensus 173 ~a~f~~~D--c~~~~l~d~~e~~dp~fDivScQF~~HYaFet----------------------------------ee~a 216 (389)
T KOG1975|consen 173 TAVFIAAD--CFKERLMDLLEFKDPRFDIVSCQFAFHYAFET----------------------------------EESA 216 (389)
T ss_pred eeEEEEec--cchhHHHHhccCCCCCcceeeeeeeEeeeecc----------------------------------HHHH
Confidence 44566665 5666542 44459999999999972100 0112
Q ss_pred HHHHHHHHhhhccCCeEEEEeccC
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
..+|+.-++-|+|||.|+-+++..
T Consensus 217 r~~l~Nva~~LkpGG~FIgTiPds 240 (389)
T KOG1975|consen 217 RIALRNVAKCLKPGGVFIGTIPDS 240 (389)
T ss_pred HHHHHHHHhhcCCCcEEEEecCcH
Confidence 368999999999999999988753
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.052 Score=52.62 Aligned_cols=56 Identities=23% Similarity=0.260 Sum_probs=42.8
Q ss_pred cCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEE
Q 017363 145 GRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIV 224 (373)
Q Consensus 145 ~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv 224 (373)
.-.+++.|+|...|.+.+||||.---. ...|+.-.+.|+|||.+.
T Consensus 96 ~~p~~~~s~d~~lsiavihhlsT~~RR-----------------------------------~~~l~e~~r~lrpgg~~l 140 (293)
T KOG1331|consen 96 KLPFREESFDAALSIAVIHHLSTRERR-----------------------------------ERALEELLRVLRPGGNAL 140 (293)
T ss_pred cCCCCCCccccchhhhhhhhhhhHHHH-----------------------------------HHHHHHHHHHhcCCCceE
Confidence 455789999999999999999943200 134566668999999999
Q ss_pred EEeccCCCCCC
Q 017363 225 FVLFSLPNGVP 235 (373)
Q Consensus 225 l~~~g~~~~~~ 235 (373)
+...+......
T Consensus 141 vyvwa~~q~~~ 151 (293)
T KOG1331|consen 141 VYVWALEQHQS 151 (293)
T ss_pred EEEehhhccCc
Confidence 99988765544
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.13 Score=45.58 Aligned_cols=20 Identities=15% Similarity=0.054 Sum_probs=17.3
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
.-+|+|+|||+|..|..+++
T Consensus 14 ~~~vLEiG~G~G~lt~~l~~ 33 (169)
T smart00650 14 GDTVLEIGPGKGALTEELLE 33 (169)
T ss_pred cCEEEEECCCccHHHHHHHh
Confidence 35899999999999998854
|
|
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.69 E-value=1 Score=43.80 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=68.5
Q ss_pred eEEeeecCCCCcccHHHHH--------------HHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC
Q 017363 64 FKLADFGCSVGPNTFIAVQ--------------NIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP 129 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~--------------~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~ 129 (373)
-.|+|+|||+|.-|+.++. ..|.-..+.+...+ -.--|.|.++|+.+--|+..-
T Consensus 150 ~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~eN~qr~~--------l~g~i~v~~~~me~d~~~~~~---- 217 (328)
T KOG2904|consen 150 THILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKENAQRLK--------LSGRIEVIHNIMESDASDEHP---- 217 (328)
T ss_pred ceEEEecCCccHHHHHHHhcCCCceEEEEeccHHHHHHHHHHHHHHh--------hcCceEEEecccccccccccc----
Confidence 4799999999999998873 33444444444322 123468888888765544331
Q ss_pred CCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHH--------H
Q 017363 130 PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSA--------Q 201 (373)
Q Consensus 130 ~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~--------Q 201 (373)
.+.+.+|+.+|+ |+-+.+.+-+ ...|+|. .|.. -
T Consensus 218 ------------------l~~~~~dllvsN---------PPYI~~dD~~----------~l~~eV~-~yEp~lALdGg~e 259 (328)
T KOG2904|consen 218 ------------------LLEGKIDLLVSN---------PPYIRKDDNR----------QLKPEVR-LYEPKLALDGGLE 259 (328)
T ss_pred ------------------cccCceeEEecC---------CCcccccchh----------hcCchhe-ecCchhhhccccc
Confidence 455667777765 2222111100 0001110 0000 0
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEeccCCCC
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFSLPNG 233 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~ 233 (373)
.-.-+..|+..-.+-|+|||.+.+...++...
T Consensus 260 G~~~~~~~~~~a~R~Lq~gg~~~le~~~~~~~ 291 (328)
T KOG2904|consen 260 GYDNLVHYWLLATRMLQPGGFEQLELVERKEH 291 (328)
T ss_pred hhHHHHHHHHhhHhhcccCCeEEEEecccccC
Confidence 00123467778888999999999999998654
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.16 Score=50.10 Aligned_cols=110 Identities=17% Similarity=0.137 Sum_probs=62.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCC--chh-hHhhc----CCCCcc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGN--DFN-TLFQT----MPPSRK 133 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~N--DFn-~lf~~----l~~~~~ 133 (373)
+++-+|+++|||.|.....++. . ++.-+|..-|+... ++. ..|.. +...+-
T Consensus 90 ~~pkrVLiIGgG~G~~~rellk--------~--------------~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv 147 (308)
T PLN02366 90 PNPKKVLVVGGGDGGVLREIAR--------H--------------SSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRV 147 (308)
T ss_pred CCCCeEEEEcCCccHHHHHHHh--------C--------------CCCCeEEEEECCHHHHHHHHHhhhhhccccCCCce
Confidence 3567999999999996554421 1 01114555554431 111 11111 112233
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-++.+++..|-... |++++|++++-.+-+|- .+.. -|. ..|++.-
T Consensus 148 ~vi~~Da~~~l~~~-~~~~yDvIi~D~~dp~~--~~~~-------------------------L~t-------~ef~~~~ 192 (308)
T PLN02366 148 NLHIGDGVEFLKNA-PEGTYDAIIVDSSDPVG--PAQE-------------------------LFE-------KPFFESV 192 (308)
T ss_pred EEEEChHHHHHhhc-cCCCCCEEEEcCCCCCC--chhh-------------------------hhH-------HHHHHHH
Confidence 46667776666543 56789999986655541 1111 111 2688888
Q ss_pred HhhhccCCeEEEEe
Q 017363 214 AHELVPGGLIVFVL 227 (373)
Q Consensus 214 a~EL~pGG~lvl~~ 227 (373)
.+-|+|||.|+...
T Consensus 193 ~~~L~pgGvlv~q~ 206 (308)
T PLN02366 193 ARALRPGGVVCTQA 206 (308)
T ss_pred HHhcCCCcEEEECc
Confidence 88999999997654
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.25 Score=51.99 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCc
Q 017363 28 SSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSAL 107 (373)
Q Consensus 28 S~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~ 107 (373)
+..|++.++...|.+.-..+. .+ ..+.-.++|+|||.|..++..... .|
T Consensus 322 ~~~q~~~~e~~~p~~~i~~ek-----lf----~~~~p~~lEIG~G~G~~~~~~A~~----------------------~p 370 (506)
T PRK01544 322 SGVQQNLLDNELPKYLFSKEK-----LV----NEKRKVFLEIGFGMGEHFINQAKM----------------------NP 370 (506)
T ss_pred CHHHHHHHHhhhhhhCCCHHH-----hC----CCCCceEEEECCCchHHHHHHHHh----------------------CC
Confidence 347888888887776522211 12 234678999999999988876311 12
Q ss_pred eeEEEecCCCCCchhhHhhcCCC--CccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCce
Q 017363 108 EFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSI 185 (373)
Q Consensus 108 ~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I 185 (373)
+..++--|.-.+-...+.+.... -.++.+...--.+....||++|||-+|-++.==|-.+- ..|.|+
T Consensus 371 ~~~~iGiE~~~~~~~~~~~~~~~~~l~N~~~~~~~~~~~~~~~~~~sv~~i~i~FPDPWpKkr-----------h~krRl 439 (506)
T PRK01544 371 DALFIGVEVYLNGVANVLKLAGEQNITNFLLFPNNLDLILNDLPNNSLDGIYILFPDPWIKNK-----------QKKKRI 439 (506)
T ss_pred CCCEEEEEeeHHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHhcCcccccEEEEECCCCCCCCC-----------Cccccc
Confidence 22333333333222222222110 11221111112234567899999999999888883321 112233
Q ss_pred eecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEE
Q 017363 186 ICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 186 ~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
. . ..||+.-+.-|+|||.+.+.
T Consensus 440 ~----~---------------~~fl~~~~~~Lk~gG~i~~~ 461 (506)
T PRK01544 440 F----N---------------KERLKILQDKLKDNGNLVFA 461 (506)
T ss_pred c----C---------------HHHHHHHHHhcCCCCEEEEE
Confidence 2 1 15888888999999999764
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.3 Score=46.62 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..-+|+++|.+--.| ||....+ .-+.+||+.-+.-|.|||+||+.=-
T Consensus 164 ~~~fDiIlcLSiTkW--------------------IHLNwgD------------~GL~~ff~kis~ll~pgGiLvvEPQ- 210 (288)
T KOG2899|consen 164 QPEFDIILCLSITKW--------------------IHLNWGD------------DGLRRFFRKISSLLHPGGILVVEPQ- 210 (288)
T ss_pred cccccEEEEEEeeee--------------------Eeccccc------------HHHHHHHHHHHHhhCcCcEEEEcCC-
Confidence 456888888888888 3433333 3567899999999999999998421
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhc
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERN 288 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~ 288 (373)
-|+....+-+-...-+. |.=-.+-.++.+..++.+.
T Consensus 211 --------------pWksY~kaar~~e~~~~---------ny~~i~lkp~~f~~~l~q~ 246 (288)
T KOG2899|consen 211 --------------PWKSYKKAARRSEKLAA---------NYFKIFLKPEDFEDWLNQI 246 (288)
T ss_pred --------------chHHHHHHHHHHHHhhc---------CccceecCHHHHHhhhhhh
Confidence 24544444332222121 1111345688888888775
|
|
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.24 Score=49.32 Aligned_cols=93 Identities=19% Similarity=0.257 Sum_probs=59.6
Q ss_pred CceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC
Q 017363 62 GTFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP 129 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~ 129 (373)
+.-+|+|.|||+|..|+... +.|++..++....+ -|.-.
T Consensus 60 ~dK~VlDVGcGtGILS~F~akAGA~~V~aVe~S~ia~~a~~iv~~N------------------------~~~~i----- 110 (346)
T KOG1499|consen 60 KDKTVLDVGCGTGILSMFAAKAGARKVYAVEASSIADFARKIVKDN------------------------GLEDV----- 110 (346)
T ss_pred CCCEEEEcCCCccHHHHHHHHhCcceEEEEechHHHHHHHHHHHhc------------------------Cccce-----
Confidence 45799999999999999875 33433333332221 11111
Q ss_pred CCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHH
Q 017363 130 PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAF 209 (373)
Q Consensus 130 ~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~F 209 (373)
+--+.|.=.+-.+|...+|+++|=|-=+||-. +.=+...
T Consensus 111 ------i~vi~gkvEdi~LP~eKVDiIvSEWMGy~Ll~-----------------------------------EsMldsV 149 (346)
T KOG1499|consen 111 ------ITVIKGKVEDIELPVEKVDIIVSEWMGYFLLY-----------------------------------ESMLDSV 149 (346)
T ss_pred ------EEEeecceEEEecCccceeEEeehhhhHHHHH-----------------------------------hhhhhhh
Confidence 11222333344567889999999887777541 2234467
Q ss_pred HHHHHhhhccCCeEE
Q 017363 210 LNARAHELVPGGLIV 224 (373)
Q Consensus 210 L~~Ra~EL~pGG~lv 224 (373)
|-+|-+=|+|||.++
T Consensus 150 l~ARdkwL~~~G~i~ 164 (346)
T KOG1499|consen 150 LYARDKWLKEGGLIY 164 (346)
T ss_pred hhhhhhccCCCceEc
Confidence 889999999999985
|
|
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.16 Score=45.57 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=18.3
Q ss_pred cHHHHHHHHHhhhccCCeEEEEeccCCC
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFSLPN 232 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g~~~ 232 (373)
.+..+++.-..-|+|+|.+++...-|.+
T Consensus 134 ~~~~L~~tl~~ll~~~~~vl~~~~~R~~ 161 (173)
T PF10294_consen 134 LFEPLVRTLKRLLKPNGKVLLAYKRRRK 161 (173)
T ss_dssp GHHHHHHHHHHHBTT-TTEEEEEE-S-T
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCEecH
Confidence 4446777777889999997777766643
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=92.40 E-value=6.2 Score=38.80 Aligned_cols=61 Identities=23% Similarity=0.408 Sum_probs=39.7
Q ss_pred HHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccc--cCCHHHHHHHH
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLY--FPTAEELKAII 285 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y--~ps~eE~~~~i 285 (373)
.-|+--+.-|.|||.|+.+. .+-. | -.+.|..+|...- +|. ||- .||..|+.+++
T Consensus 230 ~sl~gl~~al~pgG~lIyTg--QPwH-P--------Qle~IAr~LtsHr-~g~-----------~WvMRrRsq~EmD~Lv 286 (311)
T PF12147_consen 230 RSLAGLARALEPGGYLIYTG--QPWH-P--------QLEMIARVLTSHR-DGK-----------AWVMRRRSQAEMDQLV 286 (311)
T ss_pred HHHHHHHHHhCCCcEEEEcC--CCCC-c--------chHHHHHHHhccc-CCC-----------ceEEEecCHHHHHHHH
Confidence 34666778899999998653 2211 1 2355565555332 232 444 57999999999
Q ss_pred HhcCceE
Q 017363 286 ERNGCFR 292 (373)
Q Consensus 286 e~~gsF~ 292 (373)
+..| |+
T Consensus 287 ~~aG-F~ 292 (311)
T PF12147_consen 287 EAAG-FE 292 (311)
T ss_pred HHcC-Cc
Confidence 9999 75
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.39 Score=45.71 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=40.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..++.+..... . .+..+|..-|+-.+-....-+.++ +.-+.. +.
T Consensus 50 ~grVLDlG~GSG~Lalala~~~~--------~-----------~~~~~V~aVEID~~Al~~Ar~n~~--~~~~~~---~D 105 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMVHMMM--------Y-----------AKPREIVCVELNHTYYKLGKRIVP--EATWIN---AD 105 (241)
T ss_pred CCEEEEccChHHHHHHHHHHhcc--------c-----------CCCcEEEEEECCHHHHHHHHhhcc--CCEEEE---cc
Confidence 46999999999998887643321 0 112356666665443333322222 122232 23
Q ss_pred cccCCCCCCcceEEEccCc
Q 017363 143 FHGRLFPKSSLHFANSSSS 161 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~a 161 (373)
|.... +++++|+|+|+==
T Consensus 106 ~~~~~-~~~~FDlIIsNPP 123 (241)
T PHA03412 106 ALTTE-FDTLFDMAISNPP 123 (241)
T ss_pred hhccc-ccCCccEEEECCC
Confidence 33222 2568999998733
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.36 Score=45.60 Aligned_cols=61 Identities=26% Similarity=0.340 Sum_probs=41.3
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+..--+...++|++|+|=++-++.==|-.+- -+|.||.. ..||+.-++-
T Consensus 104 ~~DA~~~l~~~~~~~sl~~I~i~FPDPWpKkR-----------H~KRRl~~-------------------~~fl~~~a~~ 153 (227)
T COG0220 104 CGDAVEVLDYLIPDGSLDKIYINFPDPWPKKR-----------HHKRRLTQ-------------------PEFLKLYARK 153 (227)
T ss_pred cCCHHHHHHhcCCCCCeeEEEEECCCCCCCcc-----------ccccccCC-------------------HHHHHHHHHH
Confidence 34444445677788899999988877773322 13334432 1588888899
Q ss_pred hccCCeEEEEe
Q 017363 217 LVPGGLIVFVL 227 (373)
Q Consensus 217 L~pGG~lvl~~ 227 (373)
|+|||.+.+.+
T Consensus 154 Lk~gG~l~~aT 164 (227)
T COG0220 154 LKPGGVLHFAT 164 (227)
T ss_pred ccCCCEEEEEe
Confidence 99999997754
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.93 Score=49.63 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=20.0
Q ss_pred hhcHHHHHHHHHhhhccCCeEEEEec
Q 017363 203 KNDTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 203 ~~D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
.+|+..++..-.+-|+|||.++++..
T Consensus 632 ~~~y~~l~~~a~~lL~~gG~l~~~~~ 657 (702)
T PRK11783 632 QRDHVALIKDAKRLLRPGGTLYFSNN 657 (702)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 34666778777888999999987653
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.21 Score=48.08 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=56.8
Q ss_pred CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 151 SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 151 ~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
...|.+.|+.||.=.++-+ + .+.+-|++-+.-|||||.|++...-.
T Consensus 157 ~~~D~v~s~fcLE~a~~d~--------------------------~--------~y~~al~ni~~lLkpGG~Lil~~~l~ 202 (256)
T PF01234_consen 157 PKFDCVISSFCLESACKDL--------------------------D--------EYRRALRNISSLLKPGGHLILAGVLG 202 (256)
T ss_dssp SSEEEEEEESSHHHH-SSH--------------------------H--------HHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred cchhhhhhhHHHHHHcCCH--------------------------H--------HHHHHHHHHHHHcCCCcEEEEEEEcC
Confidence 4699999999998766443 1 23346778889999999999988754
Q ss_pred CCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 231 PNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
.+.-. + |- -.+|...-+.+.++++|++.| |+|+..+
T Consensus 203 ~t~Y~--------------------v--G~--------~~F~~l~l~ee~v~~al~~aG-~~i~~~~ 238 (256)
T PF01234_consen 203 STYYM--------------------V--GG--------HKFPCLPLNEEFVREALEEAG-FDIEDLE 238 (256)
T ss_dssp -SEEE--------------------E--TT--------EEEE---B-HHHHHHHHHHTT-EEEEEEE
T ss_pred ceeEE--------------------E--CC--------EecccccCCHHHHHHHHHHcC-CEEEecc
Confidence 32211 1 11 126778889999999999999 9999888
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.17 Score=49.15 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
..+|+..=..-|+|||.+++...
T Consensus 217 ~~~i~~~a~~~l~~~g~l~le~g 239 (280)
T COG2890 217 YRRILGEAPDILKPGGVLILEIG 239 (280)
T ss_pred HHHHHHhhHHHcCCCcEEEEEEC
Confidence 44688888889999999988765
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.66 Score=47.85 Aligned_cols=19 Identities=21% Similarity=0.287 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..|+.+.
T Consensus 298 ~~~VLDlgcGtG~~sl~la 316 (443)
T PRK13168 298 GDRVLDLFCGLGNFTLPLA 316 (443)
T ss_pred CCEEEEEeccCCHHHHHHH
Confidence 3689999999999998875
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.29 Score=49.48 Aligned_cols=19 Identities=21% Similarity=0.177 Sum_probs=16.8
Q ss_pred HHHHHHHhhhccCCeEEEE
Q 017363 208 AFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~ 226 (373)
.|++.-.+-|+|||+|++.
T Consensus 249 EFy~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 249 ELFARIATFLTEDGAFVCQ 267 (374)
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 6888888899999999887
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.42 Score=45.05 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
++-+|+|+||++|.-++.+.
T Consensus 68 ~~~~vLEiGt~~G~s~l~la 87 (234)
T PLN02781 68 NAKNTLEIGVFTGYSLLTTA 87 (234)
T ss_pred CCCEEEEecCcccHHHHHHH
Confidence 46799999999999888774
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=91.35 E-value=2.1 Score=40.40 Aligned_cols=19 Identities=5% Similarity=-0.050 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-||++.|||.|.+...+.
T Consensus 44 ~~rvLvPgCGkg~D~~~LA 62 (226)
T PRK13256 44 SSVCLIPMCGCSIDMLFFL 62 (226)
T ss_pred CCeEEEeCCCChHHHHHHH
Confidence 4699999999999999884
|
|
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=91.26 E-value=6.2 Score=36.92 Aligned_cols=142 Identities=21% Similarity=0.299 Sum_probs=76.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC------Cccc-
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP------SRKY- 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~------~~~~- 134 (373)
..-||+.-|||.|.....+.+. -++|+--|+...=-...|+.-.. ....
T Consensus 37 ~~~rvLvPgCG~g~D~~~La~~------------------------G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~ 92 (218)
T PF05724_consen 37 PGGRVLVPGCGKGYDMLWLAEQ------------------------GHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFK 92 (218)
T ss_dssp TSEEEEETTTTTSCHHHHHHHT------------------------TEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEE
T ss_pred CCCeEEEeCCCChHHHHHHHHC------------------------CCeEEEEecCHHHHHHHHHHhccCCCccccccee
Confidence 4579999999999998877411 02444444443322222222110 0000
Q ss_pred -----eeeccCcccccCCCCC--CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHH
Q 017363 135 -----FAFGVPGSFHGRLFPK--SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTE 207 (373)
Q Consensus 135 -----f~~gvpgSFy~rlfP~--~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~ 207 (373)
-+.-+-|.||. +-|. +++|+++=.++|+=| | |+..+.|.
T Consensus 93 ~~~~~~i~~~~gDfF~-l~~~~~g~fD~iyDr~~l~Al---p----------------------p~~R~~Ya-------- 138 (218)
T PF05724_consen 93 RYQAGRITIYCGDFFE-LPPEDVGKFDLIYDRTFLCAL---P----------------------PEMRERYA-------- 138 (218)
T ss_dssp EETTSSEEEEES-TTT-GGGSCHHSEEEEEECSSTTTS--------------------------GGGHHHHH--------
T ss_pred eecCCceEEEEccccc-CChhhcCCceEEEEecccccC---C----------------------HHHHHHHH--------
Confidence 12233345555 2222 247998888888763 3 23334444
Q ss_pred HHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHh
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIER 287 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~ 287 (373)
+.-++-|+|||++++.++-.+... .+| |=|.=+.+|+++++.
T Consensus 139 ---~~l~~ll~p~g~~lLi~l~~~~~~----------------------~~G------------PPf~v~~~ev~~l~~- 180 (218)
T PF05724_consen 139 ---QQLASLLKPGGRGLLITLEYPQGE----------------------MEG------------PPFSVTEEEVRELFG- 180 (218)
T ss_dssp ---HHHHHCEEEEEEEEEEEEES-CSC----------------------SSS------------SS----HHHHHHHHT-
T ss_pred ---HHHHHHhCCCCcEEEEEEEcCCcC----------------------CCC------------cCCCCCHHHHHHHhc-
Confidence 456678999999655555332111 012 335567899999999
Q ss_pred cCceEEeEEEEec
Q 017363 288 NGCFRIERMDKLP 300 (373)
Q Consensus 288 ~gsF~I~~le~~~ 300 (373)
.+ |+|+.++..+
T Consensus 181 ~~-f~i~~l~~~~ 192 (218)
T PF05724_consen 181 PG-FEIEELEEED 192 (218)
T ss_dssp TT-EEEEEEEEEE
T ss_pred CC-cEEEEEeccc
Confidence 43 9999999754
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=90.89 E-value=1.3 Score=44.08 Aligned_cols=119 Identities=14% Similarity=0.232 Sum_probs=66.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC-C-Cccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP-P-SRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~-~-~~~~f~~gv 139 (373)
...+|+|+|||+|.=|..+++.+. .. ...+.++=-|+...--....+.|. . .+.+=+.|+
T Consensus 76 ~~~~lIELGsG~~~Kt~~LL~aL~----~~--------------~~~~~Y~plDIS~~~L~~a~~~L~~~~~p~l~v~~l 137 (319)
T TIGR03439 76 SGSMLVELGSGNLRKVGILLEALE----RQ--------------KKSVDYYALDVSRSELQRTLAELPLGNFSHVRCAGL 137 (319)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH----hc--------------CCCceEEEEECCHHHHHHHHHhhhhccCCCeEEEEE
Confidence 345899999999999999877763 11 112467777877544444444454 1 234445566
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceee-----cCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIIC-----SGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~-----~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
-|.|.. .++||.+ |.. .. +..-++. .+-+|+... .||+.-+
T Consensus 138 ~gdy~~---------------~l~~l~~-~~~-~~------~~r~~~flGSsiGNf~~~ea~-----------~fL~~~~ 183 (319)
T TIGR03439 138 LGTYDD---------------GLAWLKR-PEN-RS------RPTTILWLGSSIGNFSRPEAA-----------AFLAGFL 183 (319)
T ss_pred EecHHH---------------HHhhccc-ccc-cC------CccEEEEeCccccCCCHHHHH-----------HHHHHHH
Confidence 665543 4455533 100 00 0001111 122333222 5776666
Q ss_pred h-hhccCCeEEEEeccCCC
Q 017363 215 H-ELVPGGLIVFVLFSLPN 232 (373)
Q Consensus 215 ~-EL~pGG~lvl~~~g~~~ 232 (373)
+ -|.|||.|++.+=+..+
T Consensus 184 ~~~l~~~d~lLiG~D~~k~ 202 (319)
T TIGR03439 184 ATALSPSDSFLIGLDGCKD 202 (319)
T ss_pred HhhCCCCCEEEEecCCCCC
Confidence 6 89999999998755443
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.77 Score=44.89 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=15.0
Q ss_pred HHHHHHHHhhhccCCeEEE
Q 017363 207 EAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl 225 (373)
...++.-++.|+|||+|++
T Consensus 242 ~~vl~~l~~~L~pgG~L~l 260 (287)
T PRK10611 242 ERILRRFVPLLKPDGLLFA 260 (287)
T ss_pred HHHHHHHHHHhCCCcEEEE
Confidence 3577788899999998744
|
|
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=90.17 E-value=0.31 Score=46.94 Aligned_cols=20 Identities=15% Similarity=0.125 Sum_probs=17.6
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|..+.+
T Consensus 43 ~~~VLEiG~G~G~lt~~L~~ 62 (272)
T PRK00274 43 GDNVLEIGPGLGALTEPLLE 62 (272)
T ss_pred cCeEEEeCCCccHHHHHHHH
Confidence 46899999999999998865
|
|
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.01 E-value=2.8 Score=42.86 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=20.5
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
..+++..++..-.+-|+|||.+++..
T Consensus 314 ~~~~y~~l~~~a~~lLk~gG~lv~~s 339 (396)
T PRK15128 314 ACRGYKDINMLAIQLLNPGGILLTFS 339 (396)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 34567778888888899999998765
|
|
| >PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] | Back alignment and domain information |
|---|
Probab=87.84 E-value=2.1 Score=39.74 Aligned_cols=22 Identities=32% Similarity=0.320 Sum_probs=15.7
Q ss_pred hcHHHHHHHHHhhhccCCeEEE
Q 017363 204 NDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
.|+..-|..+..+||+|-++|.
T Consensus 135 ~~l~~~L~~~~~~lk~G~~IIs 156 (205)
T PF08123_consen 135 PDLNLALAELLLELKPGARIIS 156 (205)
T ss_dssp HHHHHHHHHHHTTS-TT-EEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEE
Confidence 3666788889999999977663
|
H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A .... |
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=87.35 E-value=0.94 Score=51.75 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhccCCeEEEEeccCC
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
.+++..-.+-|+|||.|++.+....
T Consensus 258 r~i~~~a~~~L~pgG~l~lEiG~~q 282 (1082)
T PLN02672 258 ARAVEEGISVIKPMGIMIFNMGGRP 282 (1082)
T ss_pred HHHHHHHHHhccCCCEEEEEECccH
Confidence 3577777889999999999997643
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=86.87 E-value=1.2 Score=46.20 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNI 84 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~i 84 (373)
+..+|+|+|||+|+.+...++..
T Consensus 186 ~~~vVldVGAGrGpL~~~al~A~ 208 (448)
T PF05185_consen 186 KDKVVLDVGAGRGPLSMFALQAG 208 (448)
T ss_dssp TT-EEEEES-TTSHHHHHHHHTT
T ss_pred cceEEEEeCCCccHHHHHHHHHH
Confidence 36899999999999998876543
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.68 E-value=9.5 Score=36.97 Aligned_cols=115 Identities=22% Similarity=0.385 Sum_probs=66.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCch--------h--hHhhcCCCC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDF--------N--TLFQTMPPS 131 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDF--------n--~lf~~l~~~ 131 (373)
+++||--.|||||-=.-.+.-.+.+.... . .+..++|+-.|+-..-- . .+++.+|..
T Consensus 96 ~~irIWSaaCStGEEpYSiAm~l~e~~~~----~---------~~~~~~I~AtDId~~~L~~A~~G~Y~~~~~~~~~~~~ 162 (268)
T COG1352 96 RPIRIWSAACSTGEEPYSLAMLLLEALGK----L---------AGFRVKILATDIDLSVLEKARAGIYPSRELLRGLPPE 162 (268)
T ss_pred CceEEEecCcCCCccHHHHHHHHHHHhcc----c---------cCCceEEEEEECCHHHHHHHhcCCCChhHhhccCCHH
Confidence 68999999999997555443333222221 0 13568999999863211 0 112222221
Q ss_pred --ccceeeccCcccc--------------cCCC---CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCH
Q 017363 132 --RKYFAFGVPGSFH--------------GRLF---PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVK 192 (373)
Q Consensus 132 --~~~f~~gvpgSFy--------------~rlf---P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~ 192 (373)
+.||.-+..|+|- +-+. ..+-+|++||=+.|=.+++
T Consensus 163 ~~~ryF~~~~~~~y~v~~~ir~~V~F~~~NLl~~~~~~~~fD~IfCRNVLIYFd~------------------------- 217 (268)
T COG1352 163 LLRRYFERGGDGSYRVKEELRKMVRFRRHNLLDDSPFLGKFDLIFCRNVLIYFDE------------------------- 217 (268)
T ss_pred HHhhhEeecCCCcEEEChHHhcccEEeecCCCCCccccCCCCEEEEcceEEeeCH-------------------------
Confidence 3677777666442 1111 2244666666666555442
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 193 GVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 193 ~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
+++ .+.|+.=+.-|+|||.|++
T Consensus 218 ~~q-----------~~il~~f~~~L~~gG~Lfl 239 (268)
T COG1352 218 ETQ-----------ERILRRFADSLKPGGLLFL 239 (268)
T ss_pred HHH-----------HHHHHHHHHHhCCCCEEEE
Confidence 111 2567777889999999965
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=84.18 E-value=14 Score=35.48 Aligned_cols=45 Identities=22% Similarity=0.390 Sum_probs=33.2
Q ss_pred HHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhc
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVD 267 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d 267 (373)
..|..-++.|+|||.+++..++ .+.+...+..|.+.|.+..+.++
T Consensus 176 ~~le~~~~~Lkpgg~~~~y~P~---------------veQv~kt~~~l~~~g~~~ie~~E 220 (256)
T COG2519 176 NVLEHVSDALKPGGVVVVYSPT---------------VEQVEKTVEALRERGFVDIEAVE 220 (256)
T ss_pred HHHHHHHHHhCCCcEEEEEcCC---------------HHHHHHHHHHHHhcCccchhhhe
Confidence 5778888999999999887765 45566666777777876655443
|
|
| >COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=83.31 E-value=5.3 Score=38.54 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=41.7
Q ss_pred ceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHh
Q 017363 63 TFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF 125 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf 125 (373)
.-+|+|+|+|.|..|..++ ..++..++++.. +...++|+..|--.=||..++
T Consensus 31 ~d~VlEIGpG~GaLT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~-----------~~~n~~vi~~DaLk~d~~~l~ 94 (259)
T COG0030 31 GDNVLEIGPGLGALTEPLLERAARVTAIEIDRRLAEVLKERFA-----------PYDNLTVINGDALKFDFPSLA 94 (259)
T ss_pred CCeEEEECCCCCHHHHHHHhhcCeEEEEEeCHHHHHHHHHhcc-----------cccceEEEeCchhcCcchhhc
Confidence 6799999999999999998 455666666542 245689999999999998875
|
|
| >PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) | Back alignment and domain information |
|---|
Probab=82.68 E-value=0.36 Score=40.46 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=32.2
Q ss_pred ceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEec
Q 017363 153 LHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 153 vd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+|++.+.+...| ||+.. ...-+.+||+.-+.-|+|||+|++.--
T Consensus 2 yDvilclSVtkW--------------------IHLn~------------GD~Gl~~~f~~~~~~L~pGG~lilEpQ 45 (110)
T PF06859_consen 2 YDVILCLSVTKW--------------------IHLNW------------GDEGLKRFFRRIYSLLRPGGILILEPQ 45 (110)
T ss_dssp EEEEEEES-HHH--------------------HHHHH------------HHHHHHHHHHHHHHHEEEEEEEEEE--
T ss_pred ccEEEEEEeeEE--------------------EEecC------------cCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 689999999999 33322 223566899999999999999999753
|
Bin3, which shows similarity to a number of protein methyltransferases that modify RNA-binding proteins, interacts with Bicoid, which itself directs pattern formation in the early Drosophila embryo. The interaction might allow Bicoid to switch between its dual roles in transcription and translation []. Note that proteins of the entry contain a conserved HLN motif.; GO: 0008168 methyltransferase activity; PDB: 3G07_B. |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=82.62 E-value=2.2 Score=39.31 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=34.0
Q ss_pred ceEEeeecCCCCcccHHHH-------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHh
Q 017363 63 TFKLADFGCSVGPNTFIAV-------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF 125 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~-------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf 125 (373)
.-+|+|+|||+|..++... ...++..++.+.... -.+.++-.|.. ||+.-|
T Consensus 46 g~~V~DlG~GTG~La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~----------g~v~f~~~dv~--~~~~~~ 109 (198)
T COG2263 46 GKTVLDLGAGTGILAIGAALLGASRVLAVDIDPEALEIARANAEELL----------GDVEFVVADVS--DFRGKF 109 (198)
T ss_pred CCEEEEcCCCcCHHHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhC----------CceEEEEcchh--hcCCcc
Confidence 4579999999999999765 456666666665422 24566666663 444443
|
|
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=82.37 E-value=6.6 Score=37.94 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
+..+++|+|.|+|.-|..+.
T Consensus 94 ~~~~lLDlGAGdG~VT~~l~ 113 (265)
T PF05219_consen 94 KDKSLLDLGAGDGEVTERLA 113 (265)
T ss_pred cCCceEEecCCCcHHHHHHH
Confidence 57899999999999998873
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.86 E-value=5.5 Score=37.43 Aligned_cols=19 Identities=21% Similarity=0.104 Sum_probs=15.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
-.+.+|+|.|||..|-.+-
T Consensus 83 G~s~LdvGsGSGYLt~~~~ 101 (237)
T KOG1661|consen 83 GASFLDVGSGSGYLTACFA 101 (237)
T ss_pred CcceeecCCCccHHHHHHH
Confidence 3789999999999987653
|
|
| >PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein | Back alignment and domain information |
|---|
Probab=81.47 E-value=9 Score=36.01 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=59.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
..++++|+||=+..|.+.. ..-|.|.--||-+.+ ..+.+ -
T Consensus 51 ~~lrlLEVGals~~N~~s~-------------------------~~~fdvt~IDLns~~-~~I~q--------------q 90 (219)
T PF11968_consen 51 PKLRLLEVGALSTDNACST-------------------------SGWFDVTRIDLNSQH-PGILQ--------------Q 90 (219)
T ss_pred ccceEEeecccCCCCcccc-------------------------cCceeeEEeecCCCC-CCcee--------------e
Confidence 4699999999988776644 123456666665432 11110 1
Q ss_pred ccccCCC---CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 142 SFHGRLF---PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 142 SFy~rlf---P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.|.++-+ +.+++|+|.+|-.|.+ ||.+.. =-.-|+.-.+=|+
T Consensus 91 DFm~rplp~~~~e~FdvIs~SLVLNf---VP~p~~--------------------------------RG~Ml~r~~~fL~ 135 (219)
T PF11968_consen 91 DFMERPLPKNESEKFDVISLSLVLNF---VPDPKQ--------------------------------RGEMLRRAHKFLK 135 (219)
T ss_pred ccccCCCCCCcccceeEEEEEEEEee---CCCHHH--------------------------------HHHHHHHHHHHhC
Confidence 2344434 4789999999999988 553321 0134566667899
Q ss_pred cCCe-----EEEEecc
Q 017363 219 PGGL-----IVFVLFS 229 (373)
Q Consensus 219 pGG~-----lvl~~~g 229 (373)
|+|. |+++++-
T Consensus 136 ~~g~~~~~~LFlVlP~ 151 (219)
T PF11968_consen 136 PPGLSLFPSLFLVLPL 151 (219)
T ss_pred CCCccCcceEEEEeCc
Confidence 9999 8888763
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=81.17 E-value=1.7 Score=42.66 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=14.6
Q ss_pred eEEeeecCCCCcccHHH
Q 017363 64 FKLADFGCSVGPNTFIA 80 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~ 80 (373)
-+|+|+|||||..++..
T Consensus 163 ~~vLDvG~GSGILaiaA 179 (295)
T PF06325_consen 163 KRVLDVGCGSGILAIAA 179 (295)
T ss_dssp SEEEEES-TTSHHHHHH
T ss_pred CEEEEeCCcHHHHHHHH
Confidence 49999999999999877
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PRK11727 23S rRNA mA1618 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.74 E-value=4.2 Score=40.46 Aligned_cols=20 Identities=10% Similarity=0.102 Sum_probs=15.6
Q ss_pred CCceEEeeecCCCCcccHHH
Q 017363 61 CGTFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~ 80 (373)
+...+|+|+|||+|.-..++
T Consensus 113 ~~~~~vLDIGtGag~I~~lL 132 (321)
T PRK11727 113 GANVRVLDIGVGANCIYPLI 132 (321)
T ss_pred CCCceEEEecCCccHHHHHH
Confidence 35689999999999665554
|
|
| >PF13679 Methyltransf_32: Methyltransferase domain | Back alignment and domain information |
|---|
Probab=80.30 E-value=2.1 Score=36.82 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=19.5
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~ 82 (373)
....+|+|+|||.|..|+.+..
T Consensus 24 ~~~~~vvD~GsG~GyLs~~La~ 45 (141)
T PF13679_consen 24 KRCITVVDLGSGKGYLSRALAH 45 (141)
T ss_pred CCCCEEEEeCCChhHHHHHHHH
Confidence 5689999999999999998854
|
|
| >PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=80.29 E-value=2.2 Score=41.94 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|..|+.+.
T Consensus 174 ~~~VLDl~cG~G~~sl~la 192 (315)
T PRK03522 174 PRSMWDLFCGVGGFGLHCA 192 (315)
T ss_pred CCEEEEccCCCCHHHHHHH
Confidence 3689999999999998875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 373 | ||||
| 3b5i_A | 374 | Crystal Structure Of Indole-3-Acetic Acid Methyltra | 3e-37 | ||
| 1m6e_X | 359 | Crystal Structure Of Salicylic Acid Carboxyl Methyl | 1e-36 | ||
| 2eg5_A | 372 | The Structure Of Xanthosine Methyltransferase Lengt | 2e-36 | ||
| 2efj_A | 384 | The Structure Of 1,7 Dimethylxanthine Methyltransfe | 6e-31 |
| >pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 | Back alignment and structure |
|
| >pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 | Back alignment and structure |
|
| >pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 | Back alignment and structure |
|
| >pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 7e-96
Identities = 110/379 (29%), Positives = 177/379 (46%), Gaps = 35/379 (9%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
M GG G SYA NS Q M + ++ E++ + + L S F D GC
Sbjct: 6 LLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETL-ENVHLNSSAS---PPPFTAVDLGC 61
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP- 130
S G NT + I++ + ++ A D EF FF+D NDFNTLFQ +PP
Sbjct: 62 SSGANTVHIIDFIVKHISKRFDAAGIDPP-------EFTAFFSDLPSNDFNTLFQLLPPL 114
Query: 131 --------------SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSR 176
+R YF GVPGSF+ RLFP ++ F +S+ SL+WLS++ + + D R
Sbjct: 115 VSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRR 174
Query: 177 SPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPM 236
S A+N+G + G + + AY QF+ D FL ARA E+ GG + V + P
Sbjct: 175 SAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPT 234
Query: 237 IDSNGGK-LYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295
G D+ +GL+ EK D FNIP+Y P+ ++ K +++ NG F I++
Sbjct: 235 DQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDK 294
Query: 296 MDKLPDPPLMRL------KPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAEN 349
+ + + + S R+V +V+ H G +L +K+F+ ++ +
Sbjct: 295 LVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSH 354
Query: 350 FIFGELIKDHNNVNLFVLL 368
+++ + ++ L
Sbjct: 355 AK--DVLVNLQFFHIVASL 371
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 | Back alignment and structure |
|---|
Score = 281 bits (719), Expect = 8e-93
Identities = 113/372 (30%), Positives = 180/372 (48%), Gaps = 34/372 (9%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
M GG G+ SYA NS QR +I K + +I ++ +AD GC
Sbjct: 6 VLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVT-----TRLAIADLGC 60
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
S GPN AV +I+ V+ + ++ E+Q+F ND GNDFN +F+++P
Sbjct: 61 SSGPNALFAVTELIKTVEELRK------KMGRENSPEYQIFLNDLPGNDFNAIFRSLPIE 114
Query: 132 RK----YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIIC 187
F GVPGSF+GRLFP+++LHF +SS SL WLS++ I ++ + +
Sbjct: 115 NDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIY-----MA 169
Query: 188 SGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGF 247
+ + V AY QF+ D FL RA E+VPGG +V + + + ++
Sbjct: 170 NTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRA-STECCLIWQL 228
Query: 248 LGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDP----- 302
L L M ++GLI+EEK+D FNIP Y P+ E++A I + G F I+ ++
Sbjct: 229 LAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCT 288
Query: 303 ----PLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKD 358
++ +V +RAV E ++ +HFG +++ +F+ + E +
Sbjct: 289 KDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKT--- 345
Query: 359 HNNVNLFVLLKR 370
+N+ V L R
Sbjct: 346 -KFINVIVSLIR 356
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 | Back alignment and structure |
|---|
Score = 276 bits (707), Expect = 1e-90
Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 49/390 (12%)
Query: 12 SFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGC 71
M GG+GD SYAKNSS+ + K ++ + I +L +L + C FK+ D GC
Sbjct: 6 VLHMNGGEGDTSYAKNSSYNL-FLIRVKPVLEQCI-QELLRANLPNINKC--FKVGDLGC 61
Query: 72 SVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS 131
+ GPNTF V++I++++ + +N Q+F ND + NDFN++F+ +P
Sbjct: 62 ASGPNTFSTVRDIVQSIDKVGQ-----EKKNELERPTIQIFLNDLFQNDFNSVFKLLPSF 116
Query: 132 RK------------YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPA 179
+ +PGSF+ RLFP+ S+HF +S L+WLS++ ++ +
Sbjct: 117 YRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGIS 176
Query: 180 WNKGSIICSGLV-KGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMID 238
NKG I S + +AY QF D FL + EL+ G ++ +
Sbjct: 177 VNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDH-- 234
Query: 239 SNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM-- 296
L + D+ +G ++EEK+DSFN+P+Y P+ EE+K I+E G F I +
Sbjct: 235 ---PNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLET 291
Query: 297 ----------------DKLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFN 340
+ P V S +R+++E ++ HFG ++ + +
Sbjct: 292 FNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSH 351
Query: 341 FFTAKFAENFIFGELIKDHNNVNLFVLLKR 370
A+ ++ + L +
Sbjct: 352 RIAKNAAKVL----RSGKGFYDSVIISLAK 377
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 3e-07
Identities = 42/365 (11%), Positives = 93/365 (25%), Gaps = 126/365 (34%)
Query: 82 QNIIEAVQTKYRADH-----QDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFA 136
++I+ + + + QD ++ S E DH + S
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-----DH------IIMSKDAVSGTLRL 67
Query: 137 FGVPGSFHGRLFPKSSLH-FANSSSSLN--WL-SKISKEILDSRSPAWNKGSII-CSGLV 191
F + + F +N +L S I E R P+ I +
Sbjct: 68 FWTL-----LSKQEEMVQKFVEEVLRINYKFLMSPIKTE---QRQPSMMTRMYIEQRDRL 119
Query: 192 KGVSEAYSAQFKNDTEAFLNARAH--ELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLG 249
++ ++ + + +L R EL P ++ + G LG
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-------------------IDGVLG 160
Query: 250 ---SCLIDMTTKGLIDEEKVDSFNIPLYFPTA-------------EELKAIIERNGCFRI 293
+ + + + + +++ ++L I+ N R
Sbjct: 161 SGKTWVALDV---CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 294 ERMDKLPDPP---------LMRLKPSPES-----------------------VTSQIRAV 321
+ + L++ KP +T++ + V
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 322 FEGVVKEHFGYDLVDKIFNFFT--------AKFAENF-----------------IFGELI 356
+ + + +D T K+ + I E I
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 357 KDHNN 361
+D
Sbjct: 338 RDGLA 342
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 100.0 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 100.0 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 100.0 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.54 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.51 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.42 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.24 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.2 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.1 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.09 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.08 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 99.04 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 99.04 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 99.02 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 99.0 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 98.98 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 98.98 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 98.98 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 98.96 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 98.94 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 98.94 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 98.93 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 98.91 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 98.91 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 98.9 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 98.89 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.89 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.86 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 98.86 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 98.84 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.84 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 98.83 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 98.82 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.82 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.81 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.81 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.78 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 98.78 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.78 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.77 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.77 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.77 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.76 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.76 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.75 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.75 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.75 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.74 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.74 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.73 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.72 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.71 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.71 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.71 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.7 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.69 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.68 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.67 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.66 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.66 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.65 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.63 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.63 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.62 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.62 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.62 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.59 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.57 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.57 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.57 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.57 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.56 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.54 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.53 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.52 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.52 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.51 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.5 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.48 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.47 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.47 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.46 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.46 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.45 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.44 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.43 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.42 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.42 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.42 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.39 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.39 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.38 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.37 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.36 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.35 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.35 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.26 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 98.17 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 98.15 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 98.12 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 98.09 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 98.08 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 98.06 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 98.05 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 98.04 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 98.04 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 98.02 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 98.0 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 97.97 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 97.97 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 97.96 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 97.92 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.91 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 97.91 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.91 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 97.89 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 97.88 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 97.88 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 97.88 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.87 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 97.84 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.83 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.81 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.8 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 97.79 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.77 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.76 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.75 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.74 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.65 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.65 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.63 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.63 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.62 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.61 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.57 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.57 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.55 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.51 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.51 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 97.5 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.5 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.5 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 97.49 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.49 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.48 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.48 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 97.48 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.46 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.45 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.42 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.42 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.41 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.4 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.39 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.38 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.34 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 97.33 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 97.29 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.29 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.26 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 97.26 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 97.24 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 97.24 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.22 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 97.2 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.19 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.19 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.19 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.18 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 97.15 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 97.11 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 97.1 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 97.08 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 97.08 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 97.07 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 97.07 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 97.06 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 97.05 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.02 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.02 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 97.01 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.0 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 97.0 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 96.99 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 96.99 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.98 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.97 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 96.96 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.96 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 96.95 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 96.94 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 96.91 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.9 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 96.88 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 96.87 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.85 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 96.82 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 96.8 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 96.74 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 96.72 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 96.71 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.63 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 96.62 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.6 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 96.59 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 96.59 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.58 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 96.55 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 96.53 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 96.5 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 96.44 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.43 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.4 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 96.36 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 96.34 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 96.33 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 96.32 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.31 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 96.31 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.26 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 96.2 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 96.08 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 96.01 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 95.99 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 95.87 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 95.86 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 95.85 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 95.8 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.77 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 95.62 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 95.57 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 95.54 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 95.38 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 95.28 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 95.17 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 95.14 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 95.01 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 94.89 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 94.75 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 94.68 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 94.46 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 94.22 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 94.11 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 94.09 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 94.02 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 93.9 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 93.72 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 93.69 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 93.49 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 93.15 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 93.04 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 92.51 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 92.11 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 91.98 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 91.57 | |
| 3lkd_A | 542 | Type I restriction-modification system methyltrans | 91.55 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 91.51 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 90.9 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 90.04 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 89.47 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 88.99 | |
| 3gcz_A | 282 | Polyprotein; flavivirus, RNA capping, methyltransf | 88.41 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 87.61 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 86.67 | |
| 2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferas; | 86.66 | |
| 3uzu_A | 279 | Ribosomal RNA small subunit methyltransferase A; s | 86.53 | |
| 2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; m | 85.34 | |
| 3axs_A | 392 | Probable N(2),N(2)-dimethylguanosine tRNA methylt | 84.6 | |
| 2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein | 84.56 | |
| 3eld_A | 300 | Methyltransferase; flavivirus, RNA capping, guanyl | 83.64 | |
| 3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like | 80.68 |
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-94 Score=712.10 Aligned_cols=342 Identities=34% Similarity=0.558 Sum_probs=307.5
Q ss_pred cCccccccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017363 9 LPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAV 88 (373)
Q Consensus 9 ~~~~~~M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i 88 (373)
+++++||+||+|++||++||.+|++++..++|++++||++++. ... .+++++|||||||+|+||+++++.||++|
T Consensus 3 ~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~----~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i 77 (359)
T 1m6e_X 3 VRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYS-GDT----VTTRLAIADLGCSSGPNALFAVTELIKTV 77 (359)
T ss_dssp CHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHS-SSS----SSSEECCEEESCCSSTTTTTGGGTTHHHH
T ss_pred cccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC----CCCceEEEecCCCCCcchHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999998653 211 35789999999999999999999999999
Q ss_pred HHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC----CccceeeccCcccccCCCCCCcceEEEccCcccc
Q 017363 89 QTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP----SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNW 164 (373)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~----~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHW 164 (373)
+++|.+.+. .++|+|||||||||+||||+||++|+. .++||++|||||||+||||++|+|++||++||||
T Consensus 78 ~~~~~~~~~------~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 151 (359)
T 1m6e_X 78 EELRKKMGR------ENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp HHHHHSSSC------SSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTB
T ss_pred HHHHHhcCC------CCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhh
Confidence 999976431 147899999999999999999999985 2579999999999999999999999999999999
Q ss_pred cccchhhhhcCCCCCCCCCceeecC-CCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchh
Q 017363 165 LSKISKEILDSRSPAWNKGSIICSG-LVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGK 243 (373)
Q Consensus 165 LS~~P~~~~~~~~~~~nkg~I~~~~-~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~ 243 (373)
||++|+.+.+ |||+||+++ ++++|.+||++||++||..||++|++||||||+||++++|+++..+.++ ..+.
T Consensus 152 ls~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~-~~~~ 224 (359)
T 1m6e_X 152 LSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAST-ECCL 224 (359)
T ss_dssp CSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSST-TTST
T ss_pred cccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcccc-chHH
Confidence 9999999876 999999986 5788999999999999999999999999999999999999999877654 3567
Q ss_pred HHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCC-CCC--------CCCHHHH
Q 017363 244 LYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPL-MRL--------KPSPESV 314 (373)
Q Consensus 244 ~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~-~~~--------~~~~~~~ 314 (373)
+|+.|.++|++||.+|+|++|++|+||+|+|+||++|++++|+++|+|+|+++|+++.... .++ ...++.+
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~ 304 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNV 304 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHH
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHh
Confidence 8999999999999999999999999999999999999999999999999999998864211 111 2357899
Q ss_pred HHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEEecc
Q 017363 315 TSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKRVI 372 (373)
Q Consensus 315 ~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~ 372 (373)
++++||+.+|+|.+|||++++|++|+||++++.++++. ...++++++++|+||.
T Consensus 305 a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~----~~~~~~~~~~~L~k~~ 358 (359)
T 1m6e_X 305 ARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK----EKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEEEEEEBCC
T ss_pred hhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEeCC
Confidence 99999999999999999999999999999999998775 2356999999999985
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-93 Score=711.85 Aligned_cols=344 Identities=30% Similarity=0.526 Sum_probs=290.9
Q ss_pred cCccccccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017363 9 LPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAV 88 (373)
Q Consensus 9 ~~~~~~M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i 88 (373)
+++++||+||+|++||++||. |++++..++|++++||++++. ...+ +..++++|||||||+|+||+++++.||++|
T Consensus 3 ~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~-~~~~--~~~~~~~IaDlGCssG~NT~~~v~~ii~~i 78 (384)
T 2efj_A 3 LQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLR-ANLP--NINKCFKVGDLGCASGPNTFSTVRDIVQSI 78 (384)
T ss_dssp CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHH-TTCT--TTTTEEEEEEETCCSSHHHHHHHHHHHHHH
T ss_pred cccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhh-cccC--CcCCceEEEecCCCCCchHHHHHHHHHHHH
Confidence 568999999999999999999 999999999999999998653 2221 012389999999999999999999999999
Q ss_pred HHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC------------CccceeeccCcccccCCCCCCcceEE
Q 017363 89 QTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP------------SRKYFAFGVPGSFHGRLFPKSSLHFA 156 (373)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~------------~~~~f~~gvpgSFy~rlfP~~Svd~~ 156 (373)
+++|.+.+.. +++|+|||||||||+||||+||++||. .++||++|||||||+||||++|+|++
T Consensus 79 ~~~~~~~~~~-----~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v 153 (384)
T 2efj_A 79 DKVGQEKKNE-----LERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFL 153 (384)
T ss_dssp TCC---------------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEE
T ss_pred HHHhhhcccC-----CCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEE
Confidence 9988651100 347899999999999999999999974 34799999999999999999999999
Q ss_pred EccCcccccccchhhhhcCCCCCCCCCceeecC-CCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCC--
Q 017363 157 NSSSSLNWLSKISKEILDSRSPAWNKGSIICSG-LVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNG-- 233 (373)
Q Consensus 157 ~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~-~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~-- 233 (373)
||++||||||++|+.+.++.+++||||+||+++ +||+|.+||++||++||..||++|++||||||+|+++++|+++.
T Consensus 154 ~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~ 233 (384)
T 2efj_A 154 HSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFD 233 (384)
T ss_dssp EEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTC
T ss_pred EecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCccc
Confidence 999999999999999999999999999999986 57889999999999999999999999999999999999999987
Q ss_pred CCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCC-C---CC--
Q 017363 234 VPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPL-M---RL-- 307 (373)
Q Consensus 234 ~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~-~---~~-- 307 (373)
.+.+ .+.+.++|++|+.+|+|+++++|+||+|+|+||++|++++|+++|+|+|+++|+++.... . ++
T Consensus 234 ~~~~-------~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~ 306 (384)
T 2efj_A 234 HPNS-------MDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDY 306 (384)
T ss_dssp CCCH-------HHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC----
T ss_pred Cccc-------HHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccc
Confidence 5532 148999999999999999999999999999999999999999999999999998863211 1 11
Q ss_pred ------------CCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEEecc
Q 017363 308 ------------KPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKRVI 372 (373)
Q Consensus 308 ------------~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~ 372 (373)
...++.+++++||+++|+|.+|||++++|+||+||+++++++++. ...++++++++|+||.
T Consensus 307 ~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~----~~~~~~~~~~~L~k~~ 379 (384)
T 2efj_A 307 QGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS----GKGFYDSVIISLAKKP 379 (384)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH----TCCEEEEEEEEEEECC
T ss_pred cccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEEcc
Confidence 013578999999999999999999999999999999999998775 3357999999999985
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-92 Score=704.08 Aligned_cols=348 Identities=32% Similarity=0.528 Sum_probs=291.2
Q ss_pred cCccccccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017363 9 LPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAV 88 (373)
Q Consensus 9 ~~~~~~M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i 88 (373)
+++++||+||+|++||++||..|++++..++|++++||+++ .+... ..+++++|||||||+|+||+.+++.||++|
T Consensus 3 ~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l-~~~~~---~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i 78 (374)
T 3b5i_A 3 LERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENV-HLNSS---ASPPPFTAVDLGCSSGANTVHIIDFIVKHI 78 (374)
T ss_dssp -----------------------CTTHHHHHHHHHHHHHTS-CCCCS---SSCCCEEEEEETCCSSHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHh-hcccc---CCCCceEEEecCCCCChhHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999874 33311 125689999999999999999999999999
Q ss_pred HHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC---------------ccceeeccCcccccCCCCCCcc
Q 017363 89 QTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS---------------RKYFAFGVPGSFHGRLFPKSSL 153 (373)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~---------------~~~f~~gvpgSFy~rlfP~~Sv 153 (373)
+++|...+ .++|+|||+|||||+||||+||++|+.. ++||++|||||||+||||++|+
T Consensus 79 ~~~~~~~~-------~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~ 151 (374)
T 3b5i_A 79 SKRFDAAG-------IDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTI 151 (374)
T ss_dssp HHHHHHTT-------CCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCE
T ss_pred HHHHhhcC-------CCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcce
Confidence 99997654 2478999999999999999999999863 4599999999999999999999
Q ss_pred eEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCC
Q 017363 154 HFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNG 233 (373)
Q Consensus 154 d~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~ 233 (373)
|+|||++||||||++|+.+.++.+++||||+||+++++|+|.+||++||++||..||++|++||||||+|+++++|+++.
T Consensus 152 d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~ 231 (374)
T 3b5i_A 152 DFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSV 231 (374)
T ss_dssp EEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCS
T ss_pred EEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999998
Q ss_pred CCccCCCchhHH-HHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCCCC--CCCC--
Q 017363 234 VPMIDSNGGKLY-GFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPL--MRLK-- 308 (373)
Q Consensus 234 ~~~~~~~~~~~~-~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~--~~~~-- 308 (373)
.+.++.+.+.+| +.|.++|++|+.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|+++.+.. .+..
T Consensus 232 ~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~ 311 (374)
T 3b5i_A 232 DPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDD 311 (374)
T ss_dssp STTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTC
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccch
Confidence 776655566788 99999999999999999999999999999999999999999888899999999875321 1111
Q ss_pred --CCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCC--eEEEEEEEE
Q 017363 309 --PSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHN--NVNLFVLLK 369 (373)
Q Consensus 309 --~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 369 (373)
..++.+++++||+.+|+|.+|||++++|++|+||+++++++++.+. +..+ +++++++|+
T Consensus 312 ~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 312 ASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVL--VNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHH--TTCCCEEEEEEEEEC
T ss_pred hHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhh--hccccceEEEEEEeC
Confidence 1357899999999999999999999999999999999999988653 4455 789898885
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.4e-14 Score=131.86 Aligned_cols=201 Identities=18% Similarity=0.211 Sum_probs=135.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+.. . ..+|+..|+...-....-+.+ .+-.|..+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--------~----------------~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~- 109 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--------S----------------GAEVLGTDNAATMIEKARQNY--PHLHFDVADA- 109 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------T----------------TCEEEEEESCHHHHHHHHHHC--TTSCEEECCT-
T ss_pred CCCEEEEecCCCCHHHHHHHh--------C----------------CCeEEEEECCHHHHHHHHhhC--CCCEEEECCh-
Confidence 346999999999999887732 0 126777777533222221122 1223444443
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..+-+++++|+++|+.++||+. |...+|+.-++-|+|||
T Consensus 110 ---~~~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~~~~LkpgG 148 (279)
T 3ccf_A 110 ---RNFRVDKPLDAVFSNAMLHWVK--------------------------------------EPEAAIASIHQALKSGG 148 (279)
T ss_dssp ---TTCCCSSCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred ---hhCCcCCCcCEEEEcchhhhCc--------------------------------------CHHHHHHHHHHhcCCCc
Confidence 2233468999999999999976 33467888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecC
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~ 301 (373)
++++.+.+.++. ....+.+...+... |.- ......|+++++.+++..++++.| |++..++.+..
T Consensus 149 ~l~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 212 (279)
T 3ccf_A 149 RFVAEFGGKGNI--------KYILEALYNALETL---GIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNR 212 (279)
T ss_dssp EEEEEEECTTTT--------HHHHHHHHHHHHHH---TCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEEC
T ss_pred EEEEEecCCcch--------HHHHHHHHHHHHhc---CCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecc
Confidence 999998875542 11334444443322 321 234556788999999999999999 99988887754
Q ss_pred CCCCCCCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhh
Q 017363 302 PPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAEN 349 (373)
Q Consensus 302 ~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~ 349 (373)
+..+. .+++.+..|++++..+++. .++++..+++.+++.+.+...
T Consensus 213 ~~~~~--~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (279)
T 3ccf_A 213 PTTLA--EGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDK 257 (279)
T ss_dssp CEECS--SGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccc--CCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhh
Confidence 33331 1356788899887766665 578888888888888877654
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=126.35 Aligned_cols=227 Identities=12% Similarity=0.134 Sum_probs=139.4
Q ss_pred chhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcC
Q 017363 22 YSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQ 101 (373)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~ 101 (373)
..|.+.+..|......+ +.. + . .....+|+|+|||+|..+..+.... .
T Consensus 9 ~~y~~~~~~~~~~~~~l-------~~~-~--~------~~~~~~vLdiG~G~G~~~~~l~~~~--------~-------- 56 (259)
T 2p35_A 9 QQYLKFEDERTRPARDL-------LAQ-V--P------LERVLNGYDLGCGPGNSTELLTDRY--------G-------- 56 (259)
T ss_dssp GGGBCCCCGGGHHHHHH-------HTT-C--C------CSCCSSEEEETCTTTHHHHHHHHHH--------C--------
T ss_pred HHHHHHHHHHHHHHHHH-------HHh-c--C------CCCCCEEEEecCcCCHHHHHHHHhC--------C--------
Confidence 47888887777665522 211 1 1 1235689999999999998774332 1
Q ss_pred CCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCC
Q 017363 102 NSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWN 181 (373)
Q Consensus 102 ~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~n 181 (373)
..+++..|+...-....-+..+ +--|..+.. .. +.|++++|+++|+.++||+.
T Consensus 57 ------~~~v~~~D~s~~~~~~a~~~~~--~~~~~~~d~---~~-~~~~~~fD~v~~~~~l~~~~--------------- 109 (259)
T 2p35_A 57 ------VNVITGIDSDDDMLEKAADRLP--NTNFGKADL---AT-WKPAQKADLLYANAVFQWVP--------------- 109 (259)
T ss_dssp ------TTSEEEEESCHHHHHHHHHHST--TSEEEECCT---TT-CCCSSCEEEEEEESCGGGST---------------
T ss_pred ------CCEEEEEECCHHHHHHHHHhCC--CcEEEECCh---hh-cCccCCcCEEEEeCchhhCC---------------
Confidence 1257777765433222211211 223444433 22 33789999999999999974
Q ss_pred CCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC
Q 017363 182 KGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI 261 (373)
Q Consensus 182 kg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 261 (373)
|...+|+.-.+-|+|||+|++..++..+. + .... +.++...+..
T Consensus 110 -----------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~--------~~~~----~~~~~~~~~~ 153 (259)
T 2p35_A 110 -----------------------DHLAVLSQLMDQLESGGVLAVQMPDNLQE-P--------THIA----MHETADGGPW 153 (259)
T ss_dssp -----------------------THHHHHHHHGGGEEEEEEEEEEEECCTTS-H--------HHHH----HHHHHHHSTT
T ss_pred -----------------------CHHHHHHHHHHhcCCCeEEEEEeCCCCCc-H--------HHHH----HHHHhcCcch
Confidence 34468888889999999999998754321 0 1122 2233222111
Q ss_pred Chhhhccc-CcccccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCCCCHHHHHHhHHHhh-hhHHHhhhChHHHHHHH
Q 017363 262 DEEKVDSF-NIPLYFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLKPSPESVTSQIRAVF-EGVVKEHFGYDLVDKIF 339 (373)
Q Consensus 262 ~~e~~d~f-~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~~~~~~~~~~iRa~~-e~~l~~h~g~~i~delf 339 (373)
.. ..... ..+..+++.+++.+++++.| |+|+..+..... .+ .+++.+..++++.. .+++ ..++++..+++.
T Consensus 154 ~~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~-~~---~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 226 (259)
T 2p35_A 154 KD-AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNH-PM---KDADSIVEWVKGTGLRPYL-AAAGEENREAFL 226 (259)
T ss_dssp GG-GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEE-EE---SCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHH
T ss_pred HH-HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeee-cc---CCchHHhhhhhcCcchHHH-HhCCHHHHHHHH
Confidence 11 11111 23567789999999999999 987655532211 12 15788899999854 4554 478888889999
Q ss_pred HHHHHHHHhhc
Q 017363 340 NFFTAKFAENF 350 (373)
Q Consensus 340 ~ry~~~~~~~~ 350 (373)
+++.+.+.+..
T Consensus 227 ~~~~~~~~~~~ 237 (259)
T 2p35_A 227 ADYTRRIAAAY 237 (259)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 99988887654
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-12 Score=119.59 Aligned_cols=222 Identities=10% Similarity=0.055 Sum_probs=134.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--Cccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+... ..+++..|+...-....-+.+.. .+--|..+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~- 93 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR------------------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQA- 93 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT------------------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEES-
T ss_pred CCCEEEEeCCcCCHHHHHHHHC------------------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEc-
Confidence 4579999999999999877321 01566666653332222222211 11223333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
++..--+|++++|+++++.++||+.. ...+|+.-.+-|+|
T Consensus 94 --d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~p 133 (263)
T 2yqz_A 94 --DARAIPLPDESVHGVIVVHLWHLVPD--------------------------------------WPKVLAEAIRVLKP 133 (263)
T ss_dssp --CTTSCCSCTTCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEE
T ss_pred --ccccCCCCCCCeeEEEECCchhhcCC--------------------------------------HHHHHHHHHHHCCC
Confidence 33333468899999999999999753 33677778889999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++.+...+ ... .....+.+...+.. .|.- ..-+..+++.+++.+.+++.| |++...+..
T Consensus 134 gG~l~~~~~~~~-~~~-----~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 196 (263)
T 2yqz_A 134 GGALLEGWDQAE-ASP-----EWTLQERWRAFAAE---EGFP-------VERGLHAKRLKEVEEALRRLG-LKPRTREVA 196 (263)
T ss_dssp EEEEEEEEEEEC-CCH-----HHHHHHHHHHHHHH---HTCC-------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEE
T ss_pred CcEEEEEecCCC-ccH-----HHHHHHHHHHHHHH---hCCC-------cccccccCCHHHHHHHHHHcC-CCcceEEEe
Confidence 999999843321 111 00112233333221 1321 112446778999999999999 987776644
Q ss_pred cCCCCCCCCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEEec
Q 017363 300 PDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKRV 371 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~r~ 371 (373)
..... .+++.+..++++.+.+.+ .+++++..+++.+++.+.+.+...... ....-+..+++++-||
T Consensus 197 ~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 197 RWREE----RTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLD-RPFPVEKRFLLRVSRL 262 (263)
T ss_dssp EEEEE----ECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTT-SCEEEEEEEEEEEEEC
T ss_pred eeecC----CCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcC-ccccccceeEEEeeec
Confidence 32111 146788888887655544 468888889999999988877643211 0112355666666665
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-09 Score=101.95 Aligned_cols=192 Identities=15% Similarity=0.153 Sum_probs=111.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCC-CCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMP-PSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~-~~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... ..+|+.-|+...-.... +.... ..+--|..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-----------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-----------------------DVRVTGISISRPQVNQANARATAAGLANRVTFSY 117 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-----------------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-----------------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 35799999999999988774321 01455555532211111 11000 01112222
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+++..--+|++++|+++|+.++||+.. ...+|+.-++-|
T Consensus 118 ---~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L 156 (273)
T 3bus_A 118 ---ADAMDLPFEDASFDAVWALESLHHMPD--------------------------------------RGRALREMARVL 156 (273)
T ss_dssp ---CCTTSCCSCTTCEEEEEEESCTTTSSC--------------------------------------HHHHHHHHHTTE
T ss_pred ---CccccCCCCCCCccEEEEechhhhCCC--------------------------------------HHHHHHHHHHHc
Confidence 233343467899999999999999752 236788888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++..+...+... ......+...+.. + -..+.++.+++.+++++.| |++..++
T Consensus 157 ~pgG~l~i~~~~~~~~~~------~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~l~~aG-f~~~~~~ 214 (273)
T 3bus_A 157 RPGGTVAIADFVLLAPVE------GAKKEAVDAFRAG--------------G-GVLSLGGIDEYESDVRQAE-LVVTSTV 214 (273)
T ss_dssp EEEEEEEEEEEEESSCCC------HHHHHHHHHHHHH--------------H-TCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEEEEeeccCCCC------hhHHHHHHHHHhh--------------c-CccCCCCHHHHHHHHHHcC-CeEEEEE
Confidence 999999999887553221 0011111111110 0 1125789999999999999 9998877
Q ss_pred EecCCCCCCCCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHH
Q 017363 298 KLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTA 344 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~ 344 (373)
.+..+... .-..+...+++.... +...+|++..+.+...+..
T Consensus 215 ~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 215 DISAQARP----SLVKTAEAFENARSQ-VEPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp ECHHHHTT----HHHHHHHHHHHTHHH-HHHHHCHHHHHHHHHHHHH
T ss_pred ECcHhHHH----HHHHHHHHHHHhHHH-HHhhcCHHHHHHHHHHHHH
Confidence 65321110 112233333333223 3356788777777776665
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-10 Score=103.99 Aligned_cols=166 Identities=10% Similarity=0.036 Sum_probs=109.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC-ccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS-RKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~-~~~f~~gv 139 (373)
.+..+|+|+|||+|..+..+.... |..+++.-|+...-....-+.++.. +--|..+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~----------------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 100 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY----------------------PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEAD 100 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC----------------------TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC----------------------CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCc
Confidence 346899999999999988773321 1236778887543333332233322 22344443
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+..-.++ +++|+++++.++||++.. +...+|+.-++-|+|
T Consensus 101 ---~~~~~~~-~~fD~v~~~~~l~~~~~~------------------------------------~~~~~l~~~~~~Lkp 140 (234)
T 3dtn_A 101 ---YSKYDFE-EKYDMVVSALSIHHLEDE------------------------------------DKKELYKRSYSILKE 140 (234)
T ss_dssp ---TTTCCCC-SCEEEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHEEE
T ss_pred ---hhccCCC-CCceEEEEeCccccCCHH------------------------------------HHHHHHHHHHHhcCC
Confidence 3333344 999999999999997421 223578888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccC---cccccCCHHHHHHHHHhcCceEEeEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFN---IPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~---~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
||++++.....++.. .........|.....++-.+.+++..+. --.+.++.+|+.+++++.| |++.++
T Consensus 141 gG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~ 211 (234)
T 3dtn_A 141 SGIFINADLVHGETA--------FIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSC 211 (234)
T ss_dssp EEEEEEEEECBCSSH--------HHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEE
T ss_pred CcEEEEEEecCCCCh--------hhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceee
Confidence 999999987765432 2334555667777666666666554321 2235578999999999999 987665
Q ss_pred E
Q 017363 297 D 297 (373)
Q Consensus 297 e 297 (373)
.
T Consensus 212 ~ 212 (234)
T 3dtn_A 212 I 212 (234)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=6e-09 Score=95.87 Aligned_cols=192 Identities=14% Similarity=0.120 Sum_probs=114.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvp 140 (373)
...+|+|+|||+|..+..+.... ..+|+.-|+...-....-+.... .+--|..+.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d- 110 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-----------------------GAHTHGIDICSNIVNMANERVSGNNKIIFEAND- 110 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------------------CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECC-
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-----------------------CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECc-
Confidence 45799999999999988874322 01566666654322222222221 122233333
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+..--+|++++|+++|+.++||++. .|...+|+.-.+-|+||
T Consensus 111 --~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pg 152 (266)
T 3ujc_A 111 --ILTKEFPENNFDLIYSRDAILALSL------------------------------------ENKNKLFQKCYKWLKPT 152 (266)
T ss_dssp --TTTCCCCTTCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred --cccCCCCCCcEEEEeHHHHHHhcCh------------------------------------HHHHHHHHHHHHHcCCC
Confidence 3333468899999999999999731 15567888888999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
|++++..+..+...+. ...+...+. ..|. .+++.+++..++++.| |++...+.+.
T Consensus 153 G~l~~~~~~~~~~~~~--------~~~~~~~~~---~~~~-------------~~~~~~~~~~~l~~~G-f~~~~~~~~~ 207 (266)
T 3ujc_A 153 GTLLITDYCATEKENW--------DDEFKEYVK---QRKY-------------TLITVEEYADILTACN-FKNVVSKDLS 207 (266)
T ss_dssp EEEEEEEEEESCGGGC--------CHHHHHHHH---HHTC-------------CCCCHHHHHHHHHHTT-CEEEEEEECH
T ss_pred CEEEEEEeccCCcccc--------hHHHHHHHh---cCCC-------------CCCCHHHHHHHHHHcC-CeEEEEEeCC
Confidence 9999998876542111 111121111 1232 5679999999999999 9987776442
Q ss_pred CCCCCCCCCCHHHHHHhHHHhhh--hHHHhhhChHHHHHHHHHHHHHHH
Q 017363 301 DPPLMRLKPSPESVTSQIRAVFE--GVVKEHFGYDLVDKIFNFFTAKFA 347 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~iRa~~e--~~l~~h~g~~i~delf~ry~~~~~ 347 (373)
.. ....+..|.+.+.. .-+.+.++++..+.+.+.....+.
T Consensus 208 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (266)
T 3ujc_A 208 DY-------WNQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIK 249 (266)
T ss_dssp HH-------HHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 11 11222233332221 222334667666666666655554
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=8.1e-09 Score=94.95 Aligned_cols=189 Identities=18% Similarity=0.132 Sum_probs=109.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~-~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... +. +|+..|+...-.... +....- .+--|..
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~----------------------~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 102 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYV----------------------KG-QITGIDLFPDFIEIFNENAVKANCADRVKGIT 102 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHC----------------------CS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhC----------------------CC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 34699999999999988774321 11 566666543221111 111110 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. ..--+|++++|+++|+.++||+. | ..+|+.-.+-|
T Consensus 103 ~d~---~~~~~~~~~fD~v~~~~~l~~~~--~-------------------------------------~~~l~~~~~~L 140 (257)
T 3f4k_A 103 GSM---DNLPFQNEELDLIWSEGAIYNIG--F-------------------------------------ERGMNEWSKYL 140 (257)
T ss_dssp CCT---TSCSSCTTCEEEEEEESCSCCCC--H-------------------------------------HHHHHHHHTTE
T ss_pred CCh---hhCCCCCCCEEEEEecChHhhcC--H-------------------------------------HHHHHHHHHHc
Confidence 332 23336789999999999999972 1 14677777899
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++..+........ ..+...|.... | ..++.+++...+++.| |++....
T Consensus 141 ~pgG~l~~~~~~~~~~~~~---------~~~~~~~~~~~---------------~-~~~~~~~~~~~l~~aG-f~~v~~~ 194 (257)
T 3f4k_A 141 KKGGFIAVSEASWFTSERP---------AEIEDFWMDAY---------------P-EISVIPTCIDKMERAG-YTPTAHF 194 (257)
T ss_dssp EEEEEEEEEEEEESSSCCC---------HHHHHHHHHHC---------------T-TCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEEeeccCCCCh---------HHHHHHHHHhC---------------C-CCCCHHHHHHHHHHCC-CeEEEEE
Confidence 9999999998753322111 12222233211 1 2578999999999999 9988876
Q ss_pred EecCCCCCCCCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHH
Q 017363 298 KLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFA 347 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~ 347 (373)
.+....|... +...++...+.+...+.++...+++.++..+...
T Consensus 195 ~~~~~~w~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (257)
T 3f4k_A 195 ILPENCWTEH------YFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERS 238 (257)
T ss_dssp ECCGGGTCCC------CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ECChhhHHHH------HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 6644433221 1122233334444445555666666666655444
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-08 Score=95.35 Aligned_cols=167 Identities=13% Similarity=0.103 Sum_probs=98.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCC-ccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPS-RKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~-~~~f~~ 137 (373)
...+|+|+|||+|..++.+.... . .+|+--|+..+-....=+.+ .-. +--|..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~--------~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 128 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY--------D---------------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI 128 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------C---------------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhC--------C---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 34699999999999998874332 0 15666666432211111111 111 222444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.... + ++++|+++|+.++|++..... .. -.+++..+|+.-.+-|
T Consensus 129 ~d~~~----~--~~~fD~v~~~~~~~~~~d~~~-~~----------------------------~~~~~~~~l~~~~~~L 173 (302)
T 3hem_A 129 QGWEE----F--DEPVDRIVSLGAFEHFADGAG-DA----------------------------GFERYDTFFKKFYNLT 173 (302)
T ss_dssp CCGGG----C--CCCCSEEEEESCGGGTTCCSS-CC----------------------------CTTHHHHHHHHHHHSS
T ss_pred CCHHH----c--CCCccEEEEcchHHhcCcccc-cc----------------------------chhHHHHHHHHHHHhc
Confidence 44322 2 689999999999999764310 00 0136678999999999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHHHHHHhcCceEEeEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
+|||+|++...+..+............++ ...+.+.. ....+|. +.|+.+++...+++.| |++..+
T Consensus 174 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~ 240 (302)
T 3hem_A 174 PDDGRMLLHTITIPDKEEAQELGLTSPMS--LLRFIKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVERY 240 (302)
T ss_dssp CTTCEEEEEEEECCCHHHHHHHTCCCCHH--HHHHHHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEEE
T ss_pred CCCcEEEEEEEeccCccchhhcccccccc--ccchHHHH----------HHhcCCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 99999999998766431100000000000 00001111 1122332 6799999999999999 999888
Q ss_pred EEe
Q 017363 297 DKL 299 (373)
Q Consensus 297 e~~ 299 (373)
+.+
T Consensus 241 ~~~ 243 (302)
T 3hem_A 241 HRI 243 (302)
T ss_dssp EEC
T ss_pred EeC
Confidence 765
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=7.2e-09 Score=95.08 Aligned_cols=152 Identities=14% Similarity=0.152 Sum_probs=92.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
...+|+|+|||+|..+..+... .+ +++..|+...-....-+.+ ...+--|..+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 76 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPY----------------------VQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQG 76 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG----------------------SS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCEEEEEccCcCHHHHHHHHh----------------------CC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEec
Confidence 4579999999999988876311 01 4566665432211111111 0011123333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. +..--+|++++|+++++.++||+. |...+|+.-++-|+
T Consensus 77 d---~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk 115 (239)
T 1xxl_A 77 T---AESLPFPDDSFDIITCRYAAHHFS--------------------------------------DVRKAVREVARVLK 115 (239)
T ss_dssp B---TTBCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEE
T ss_pred c---cccCCCCCCcEEEEEECCchhhcc--------------------------------------CHHHHHHHHHHHcC
Confidence 2 233346789999999999999975 33367788889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++.....++. + ..+.+...+..+. .+ ......+.+++..++++.| |++..++.
T Consensus 116 pgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~~ 173 (239)
T 1xxl_A 116 QDGRFLLVDHYAPED-P--------VLDEFVNHLNRLR-DP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQK 173 (239)
T ss_dssp EEEEEEEEEECBCSS-H--------HHHHHHHHHHHHH-CT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCcEEEEEEcCCCCC-h--------hHHHHHHHHHHhc-cc-----------cccCCCCHHHHHHHHHHCC-CcEEEEEe
Confidence 999999987654432 1 1222222222221 11 1124568999999999999 99888776
Q ss_pred ec
Q 017363 299 LP 300 (373)
Q Consensus 299 ~~ 300 (373)
+.
T Consensus 174 ~~ 175 (239)
T 1xxl_A 174 WN 175 (239)
T ss_dssp EE
T ss_pred ec
Confidence 53
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.8e-08 Score=93.67 Aligned_cols=185 Identities=17% Similarity=0.119 Sum_probs=107.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc---CCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT---MPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~---l~~-~~~~f~~ 137 (373)
...+|+|+|||+|..++.+... +..+|+..|+...-....=+. ..- .+--|..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-----------------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 102 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-----------------------VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIV 102 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-----------------------CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-----------------------cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEE
Confidence 4679999999999998877311 122566667643221111111 110 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .+--+|++++|+|+|+.++|++ .. ..+|+.-.+-|
T Consensus 103 ~d~---~~~~~~~~~fD~i~~~~~~~~~-~~--------------------------------------~~~l~~~~~~L 140 (267)
T 3kkz_A 103 GSM---DDLPFRNEELDLIWSEGAIYNI-GF--------------------------------------ERGLNEWRKYL 140 (267)
T ss_dssp CCT---TSCCCCTTCEEEEEESSCGGGT-CH--------------------------------------HHHHHHHGGGE
T ss_pred cCh---hhCCCCCCCEEEEEEcCCceec-CH--------------------------------------HHHHHHHHHHc
Confidence 332 2333678999999999999997 21 24777788999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++..+........ ..+...|.+ . .| .+++.+++.+.+++.| |++...+
T Consensus 141 kpgG~l~~~~~~~~~~~~~---------~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~ 194 (267)
T 3kkz_A 141 KKGGYLAVSECSWFTDERP---------AEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATF 194 (267)
T ss_dssp EEEEEEEEEEEEESSSCCC---------HHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCCEEEEEEeeecCCCCh---------HHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEE
Confidence 9999999998764322111 122233321 1 12 4679999999999999 9998887
Q ss_pred EecCCCCCCCCCCHHHHHHhHHHhhhhHHHhhhChHHHHHHHHHHH
Q 017363 298 KLPDPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFT 343 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~~h~g~~i~delf~ry~ 343 (373)
.+....|.. .+...+..+...+...+-....+.++.++..
T Consensus 195 ~~~~~~w~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T 3kkz_A 195 ILPENCWTD------HYFTPKVAAQKIFLTKYAGNKIAEEFSMLQS 234 (267)
T ss_dssp ECCGGGTTT------TTHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred ECCHhHHHH------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 765443321 1223333344444443333344455544443
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=8.1e-08 Score=90.06 Aligned_cols=160 Identities=16% Similarity=0.229 Sum_probs=90.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... . .+|+.-|+..+-....=+.+ .. .+--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--------~---------------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY--------D---------------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------C---------------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHc--------C---------------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 34699999999999988774221 0 14555555332211111111 00 1112333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .. +| +++|+++|..++|++.. .|+..+|+.-.+-|
T Consensus 121 ~d~----~~-~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 158 (287)
T 1kpg_A 121 AGW----EQ-FD-EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLL 158 (287)
T ss_dssp SCG----GG-CC-CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHS
T ss_pred CCh----hh-CC-CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhc
Confidence 322 12 34 88999999999999742 14557888888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcc-cccCCHHHHHHHHHhcCceEEeEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIP-LYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P-~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
+|||++++..+...+.......+....+.. ..+.+.....+ .| ...||.+++...+++.| |++...
T Consensus 159 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~s~~~~~~~l~~aG-f~~~~~ 225 (287)
T 1kpg_A 159 PADGVMLLHTITGLHPKEIHERGLPMSFTF--ARFLKFIVTEI----------FPGGRLPSIPMVQECASANG-FTVTRV 225 (287)
T ss_dssp CTTCEEEEEEEEECCHHHHTTTTCSCHHHH--HHHHHHHHHHT----------STTCCCCCHHHHHHHHHTTT-CEEEEE
T ss_pred CCCCEEEEEEecCCCccccccccccccccc--cchhhhHHhee----------CCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 999999999987654211000000000000 00111111111 11 25679999999999999 998887
Q ss_pred EEe
Q 017363 297 DKL 299 (373)
Q Consensus 297 e~~ 299 (373)
+.+
T Consensus 226 ~~~ 228 (287)
T 1kpg_A 226 QSL 228 (287)
T ss_dssp EEC
T ss_pred EeC
Confidence 754
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=99.00 E-value=9.6e-09 Score=95.02 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=92.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~~~~~f~~g 138 (373)
...+|+|+|||+|..+..+... .+ +|+..|+...-.... ++.....+--|..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~ 92 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPF----------------------VK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQG 92 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGG----------------------SS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHHHh----------------------CC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe
Confidence 4579999999999988776311 11 566666643221111 10000011223333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. +..--+|++++|+++|+.++||+.. ...+|+.-.+-|+
T Consensus 93 d---~~~l~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~r~Lk 131 (260)
T 1vl5_A 93 D---AEQMPFTDERFHIVTCRIAAHHFPN--------------------------------------PASFVSEAYRVLK 131 (260)
T ss_dssp C---C-CCCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEE
T ss_pred c---HHhCCCCCCCEEEEEEhhhhHhcCC--------------------------------------HHHHHHHHHHHcC
Confidence 3 3333478899999999999999753 3367778889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++.....++. + .+..+...+..+... ....+.+.+++.+++++.| |++..++.
T Consensus 132 pgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 189 (260)
T 1vl5_A 132 KGGQLLLVDNSAPEN-D--------AFDVFYNYVEKERDY------------SHHRAWKKSDWLKMLEEAG-FELEELHC 189 (260)
T ss_dssp EEEEEEEEEEEBCSS-H--------HHHHHHHHHHHHHCT------------TCCCCCBHHHHHHHHHHHT-CEEEEEEE
T ss_pred CCCEEEEEEcCCCCC-H--------HHHHHHHHHHHhcCc------------cccCCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999987654432 1 122222222222111 1124568999999999999 99888776
Q ss_pred ec
Q 017363 299 LP 300 (373)
Q Consensus 299 ~~ 300 (373)
+.
T Consensus 190 ~~ 191 (260)
T 1vl5_A 190 FH 191 (260)
T ss_dssp EE
T ss_pred ee
Confidence 53
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=98.98 E-value=8.7e-08 Score=90.26 Aligned_cols=149 Identities=13% Similarity=0.056 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... . .+++.-|+...-....=+.+ .. .+--|..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~--------~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 138 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF--------G---------------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY 138 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------C---------------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------C---------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 35799999999999998774321 0 15666666432111110001 00 1112332
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+++..--+|++++|++++..++||+.. ...+|+.-.+-|
T Consensus 139 ---~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L 177 (297)
T 2o57_A 139 ---GSFLEIPCEDNSYDFIWSQDAFLHSPD--------------------------------------KLKVFQECARVL 177 (297)
T ss_dssp ---CCTTSCSSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHE
T ss_pred ---cCcccCCCCCCCEeEEEecchhhhcCC--------------------------------------HHHHHHHHHHHc
Confidence 344444468899999999999999753 236788888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++..+...+..+. . .+ ...+..+ ..| ..++.+++..++++.| |++...+
T Consensus 178 kpgG~l~~~~~~~~~~~~~-----~-~~---~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~~~~~~ 232 (297)
T 2o57_A 178 KPRGVMAITDPMKEDGIDK-----S-SI---QPILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLRTF 232 (297)
T ss_dssp EEEEEEEEEEEEECTTCCG-----G-GG---HHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCeEEEEEEeccCCCCch-----H-HH---HHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-CeEEEEE
Confidence 9999999998875543221 0 11 1111111 112 3568999999999999 9988777
Q ss_pred Ee
Q 017363 298 KL 299 (373)
Q Consensus 298 ~~ 299 (373)
.+
T Consensus 233 ~~ 234 (297)
T 2o57_A 233 SR 234 (297)
T ss_dssp EC
T ss_pred EC
Confidence 54
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.4e-09 Score=99.65 Aligned_cols=159 Identities=11% Similarity=0.157 Sum_probs=91.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccc---e
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKY---F 135 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~---f 135 (373)
...+|+|+|||+|..|..++..+ ..++ +...+.+...|...+-....-+.+. ...++ |
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l----~~~~------------~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~ 115 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKV----QAQY------------PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAW 115 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHH----HHHS------------TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHHH----HhhC------------CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEE
Confidence 46899999999998776665444 2221 1112234777765433221111111 10111 1
Q ss_pred eeccCccccc---CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHH
Q 017363 136 AFGVPGSFHG---RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNA 212 (373)
Q Consensus 136 ~~gvpgSFy~---rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 212 (373)
..+..-.+-. +-++++++|+|+++.+|||+. |+..+|+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--------------------------------------d~~~~l~~ 157 (292)
T 2aot_A 116 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--------------------------------------DIPATLKF 157 (292)
T ss_dssp ECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--------------------------------------CHHHHHHH
T ss_pred EecchhhhhhhhccccCCCceeEEEEeeeeeecC--------------------------------------CHHHHHHH
Confidence 2222111111 125789999999999999976 44467888
Q ss_pred HHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceE
Q 017363 213 RAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 213 Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
-++-|||||++++.....+. .|.. .|...... + ... -...+++.+++..++++.| |+
T Consensus 158 ~~r~LkpgG~l~i~~~~~~~-----------~~~~---~~~~~~~~-~-~~~------~~~~~~~~~~~~~~l~~aG-f~ 214 (292)
T 2aot_A 158 FHSLLGTNAKMLIIVVSGSS-----------GWDK---LWKKYGSR-F-PQD------DLCQYITSDDLTQMLDNLG-LK 214 (292)
T ss_dssp HHHTEEEEEEEEEEEECTTS-----------HHHH---HHHHHGGG-S-CCC------TTCCCCCHHHHHHHHHHHT-CC
T ss_pred HHHHcCCCcEEEEEEecCCc-----------cHHH---HHHHHHHh-c-cCC------CcccCCCHHHHHHHHHHCC-Cc
Confidence 88999999999999765321 1221 12222110 0 000 1235688999999999999 98
Q ss_pred EeEEE
Q 017363 293 IERMD 297 (373)
Q Consensus 293 I~~le 297 (373)
+...+
T Consensus 215 ~~~~~ 219 (292)
T 2aot_A 215 YECYD 219 (292)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76644
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.5e-09 Score=94.11 Aligned_cols=143 Identities=20% Similarity=0.083 Sum_probs=96.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+... + .+++.-|+...--...-+..+ +--|..+ .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~------------~------------~~v~gvD~s~~~~~~a~~~~~--~~~~~~~---d 92 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL------------G------------HQIEGLEPATRLVELARQTHP--SVTFHHG---T 92 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT------------T------------CCEEEECCCHHHHHHHHHHCT--TSEEECC---C
T ss_pred CCeEEEecCCCCHHHHHHHhc------------C------------CeEEEEeCCHHHHHHHHHhCC--CCeEEeC---c
Confidence 468999999999988876321 0 156666664322111111111 1123333 3
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCe
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 222 (373)
+..--+|++++|+++++.++||+.. .|...+|+.-++-|+|||+
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~ 136 (203)
T 3h2b_A 93 ITDLSDSPKRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGG 136 (203)
T ss_dssp GGGGGGSCCCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEE
T ss_pred ccccccCCCCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3333467899999999999999751 1555788888999999999
Q ss_pred EEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecC
Q 017363 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 223 lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~ 301 (373)
+++..+........ .....+.++.+.+|++.++++.| |++..++.+..
T Consensus 137 l~i~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 137 LLMSFFSGPSLEPM------------------------------YHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp EEEEEECCSSCEEE------------------------------CCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred EEEEEccCCchhhh------------------------------hchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 99998776542111 11123557889999999999999 99999887754
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.4e-09 Score=94.46 Aligned_cols=156 Identities=16% Similarity=0.163 Sum_probs=98.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+... ..+++.-|+...-....-+.++ .+--|..+ .
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~---d 97 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA------------------------GRTVYGIEPSREMRMIAKEKLP-KEFSITEG---D 97 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT------------------------TCEEEEECSCHHHHHHHHHHSC-TTCCEESC---C
T ss_pred CCeEEEeCCCCCHHHHHHHhC------------------------CCeEEEEeCCHHHHHHHHHhCC-CceEEEeC---C
Confidence 469999999999988877321 0167777775433222222222 12223333 3
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCe
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 222 (373)
+..-.+| +++|+++++.++||+... +...+|+.-++-|+|||+
T Consensus 98 ~~~~~~~-~~fD~v~~~~~l~~~~~~------------------------------------~~~~~l~~~~~~LkpgG~ 140 (220)
T 3hnr_A 98 FLSFEVP-TSIDTIVSTYAFHHLTDD------------------------------------EKNVAIAKYSQLLNKGGK 140 (220)
T ss_dssp SSSCCCC-SCCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHSCTTCE
T ss_pred hhhcCCC-CCeEEEEECcchhcCChH------------------------------------HHHHHHHHHHHhcCCCCE
Confidence 3343445 999999999999997532 112478888899999999
Q ss_pred EEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 223 lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
+++..+...+. ......+..+...|... ...-..+.++++.++++.++++.| |+|...+..
T Consensus 141 l~i~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 141 IVFADTIFADQ------------DAYDKTVEAAKQRGFHQ---LANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp EEEEEECBSSH------------HHHHHHHHHHHHTTCHH---HHHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred EEEEeccccCh------------HHHHHHHHHHHhCCCcc---chhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 99997654432 12222333444555421 111123457789999999999999 998877643
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.6e-08 Score=92.80 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=93.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc---CCCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT---MPPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~---l~~~~~~f~~g 138 (373)
...+|+|+|||+|..+..+... . |..+++.-|+..+-....-+. ....+--|..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~--------~--------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 94 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKN--------N--------------PDAEITSIDISPESLEKARENTEKNGIKNVKFLQA 94 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHH--------C--------------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHh--------C--------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc
Confidence 4579999999999988776322 1 122677777643222211111 11112223333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
....-.+|++++|+++++.++||+.. ...+|+.-.+-|+
T Consensus 95 ---d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~ 133 (276)
T 3mgg_A 95 ---NIFSLPFEDSSFDHIFVCFVLEHLQS--------------------------------------PEEALKSLKKVLK 133 (276)
T ss_dssp ---CGGGCCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEE
T ss_pred ---ccccCCCCCCCeeEEEEechhhhcCC--------------------------------------HHHHHHHHHHHcC
Confidence 33444578899999999999999763 3357777788999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++............ ...................|. ...+.+++..++++.| |++..++.
T Consensus 134 pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~aG-f~~v~~~~ 197 (276)
T 3mgg_A 134 PGGTITVIEGDHGSCYFHP--EGKKAIEAWNCLIRVQAYMKG-------------NSLVGRQIYPLLQESG-FEKIRVEP 197 (276)
T ss_dssp EEEEEEEEEECGGGCEEES--CCHHHHHHHHHHHHHHHHTTC-------------CTTGGGGHHHHHHHTT-CEEEEEEE
T ss_pred CCcEEEEEEcCCCCceECC--CcHHHHHHHHHHHHHHHhcCC-------------CcchHHHHHHHHHHCC-CCeEEEee
Confidence 9999999886543221100 011112222211111112222 2345688999999999 99888775
Q ss_pred e
Q 017363 299 L 299 (373)
Q Consensus 299 ~ 299 (373)
.
T Consensus 198 ~ 198 (276)
T 3mgg_A 198 R 198 (276)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.3e-09 Score=94.87 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=102.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC--------cc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS--------RK 133 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~--------~~ 133 (373)
...+|+|+|||+|..+..+... ..+++.-|+...-....-+.+... +-
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 85 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK------------------------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKA 85 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcce
Confidence 4579999999999988877322 015666666433222222222111 11
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-|..+. +..--+|++++|+++++.++|++.... ++..+|+.-
T Consensus 86 ~~~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~~~-----------------------------------~~~~~l~~~ 127 (235)
T 3sm3_A 86 EFKVEN---ASSLSFHDSSFDFAVMQAFLTSVPDPK-----------------------------------ERSRIIKEV 127 (235)
T ss_dssp EEEECC---TTSCCSCTTCEEEEEEESCGGGCCCHH-----------------------------------HHHHHHHHH
T ss_pred EEEEec---ccccCCCCCceeEEEEcchhhcCCCHH-----------------------------------HHHHHHHHH
Confidence 233333 333346789999999999999976322 233688888
Q ss_pred HhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhccc--CcccccCCHHHHHHHHHhcCce
Q 017363 214 AHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSF--NIPLYFPTAEELKAIIERNGCF 291 (373)
Q Consensus 214 a~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f--~~P~y~ps~eE~~~~ie~~gsF 291 (373)
.+-|+|||+|++..++.....+ .........+......|.......... ....++++.+|++.++++.| |
T Consensus 128 ~~~L~pgG~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f 199 (235)
T 3sm3_A 128 FRVLKPGAYLYLVEFGQNWHLK-------LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-F 199 (235)
T ss_dssp HHHEEEEEEEEEEEEBCCTTSH-------HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-E
T ss_pred HHHcCCCeEEEEEECCcchhHH-------HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-C
Confidence 8999999999999988754322 112222222333323332111111111 22346789999999999999 9
Q ss_pred EEeEEEEec
Q 017363 292 RIERMDKLP 300 (373)
Q Consensus 292 ~I~~le~~~ 300 (373)
++..++...
T Consensus 200 ~~~~~~~~~ 208 (235)
T 3sm3_A 200 EIDYFRVKE 208 (235)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEecc
Confidence 999887553
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.93 E-value=8.5e-09 Score=96.82 Aligned_cols=161 Identities=14% Similarity=0.222 Sum_probs=96.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC----Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP----SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~----~~~~f~~ 137 (373)
+..+|+|+|||+|..+..+... ..+|+..|+...-....-+.+.. .+--|..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 123 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER------------------------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIH 123 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC------------------------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3579999999999988877321 01566666543221111111111 1112333
Q ss_pred ccCcccccCC-CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 138 GVPGSFHGRL-FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 138 gvpgSFy~rl-fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+.. ..-. ++++++|+++++.++||+. |...+|+.-++-
T Consensus 124 ~d~---~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~ 162 (285)
T 4htf_A 124 CAA---QDVASHLETPVDLILFHAVLEWVA--------------------------------------DPRSVLQTLWSV 162 (285)
T ss_dssp SCG---GGTGGGCSSCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHT
T ss_pred cCH---HHhhhhcCCCceEEEECchhhccc--------------------------------------CHHHHHHHHHHH
Confidence 332 2222 5789999999999999975 333678888899
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEE
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
|+|||++++......... ....+...|.. ...+..... .....+.++.+.+|++.++++.| |++...
T Consensus 163 LkpgG~l~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~ 229 (285)
T 4htf_A 163 LRPGGVLSLMFYNAHGLL---------MHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGK 229 (285)
T ss_dssp EEEEEEEEEEEEBHHHHH---------HHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEE
T ss_pred cCCCeEEEEEEeCCchHH---------HHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeee
Confidence 999999999987643210 00111111111 122221111 11234567789999999999999 999888
Q ss_pred EEec
Q 017363 297 DKLP 300 (373)
Q Consensus 297 e~~~ 300 (373)
+.+.
T Consensus 230 ~~~~ 233 (285)
T 4htf_A 230 TGVR 233 (285)
T ss_dssp EEES
T ss_pred eeEE
Confidence 8664
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.7e-08 Score=95.10 Aligned_cols=159 Identities=18% Similarity=0.220 Sum_probs=91.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCCC-ccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPPS-RKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~~-~~~f~~g 138 (373)
.-+|+|+|||+|..|+.+...+ ..+..+|+--|+...--... +...... +--|..+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~--------------------~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~ 130 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNI--------------------HHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG 130 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTC--------------------CSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhc--------------------CCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec
Confidence 4699999999999988773221 12334666666653221111 1111111 1224444
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.. .+ +|..+.|+++|+++|||+.. .|...+|+.-++-|+
T Consensus 131 D~---~~--~~~~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 131 DI---RD--IAIENASMVVLNFTLQFLEP------------------------------------SERQALLDKIYQGLN 169 (261)
T ss_dssp CT---TT--CCCCSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred cc---cc--ccccccccceeeeeeeecCc------------------------------------hhHhHHHHHHHHHcC
Confidence 43 11 35567999999999999751 144568888899999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhh----cccCcccccCCHHHHHHHHHhcCceE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKV----DSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~----d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
|||+|++.-....... ...+.+...+.+.. ..|+- +.+. ....-.....|.+|++..+++.| |+
T Consensus 170 pGG~lii~e~~~~~~~--------~~~~~~~~~~~~~~~~~g~s-~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~ 238 (261)
T 4gek_A 170 PGGALVLSEKFSFEDA--------KVGELLFNMHHDFKRANGYS-ELEISQKRSMLENVMLTDSVETHKARLHKAG-FE 238 (261)
T ss_dssp EEEEEEEEEEBCCSSH--------HHHHHHHHHHHHHHHHTTGG-GSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CS
T ss_pred CCcEEEEEeccCCCCH--------HHHHHHHHHHHHHHHHcCCC-HHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CC
Confidence 9999998755443221 12233333333332 22332 1111 11111234468999999999999 85
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.91 E-value=1e-08 Score=93.49 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=94.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC----ccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS----RKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~----~~~f~~g 138 (373)
..+|+|+|||+|..+..+.. +..+|+..|+...-....-+.++.. +--|..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~------------------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 122 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS------------------------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKE 122 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB------------------------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECC
T ss_pred CCCEEEeCCCCCHHHHHHHh------------------------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEEC
Confidence 35999999999999887621 1236777777543322222222221 1224444
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.. . .+.|++++|+++++.++||+.. .|...+|+.-++-|+
T Consensus 123 d~---~-~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 123 DV---F-TWRPTELFDLIFDYVFFCAIEP------------------------------------EMRPAWAKSMYELLK 162 (235)
T ss_dssp CT---T-TCCCSSCEEEEEEESSTTTSCG------------------------------------GGHHHHHHHHHHHEE
T ss_pred ch---h-cCCCCCCeeEEEEChhhhcCCH------------------------------------HHHHHHHHHHHHHCC
Confidence 33 2 3557789999999999999751 144578888889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++......... ..|.|..+.++++.++++.| |++..++.
T Consensus 163 pgG~l~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 206 (235)
T 3lcc_A 163 PDGELITLMYPITDHV-----------------------------------GGPPYKVDVSTFEEVLVPIG-FKAVSVEE 206 (235)
T ss_dssp EEEEEEEEECCCSCCC-----------------------------------SCSSCCCCHHHHHHHHGGGT-EEEEEEEE
T ss_pred CCcEEEEEEecccccC-----------------------------------CCCCccCCHHHHHHHHHHcC-CeEEEEEe
Confidence 9999999776544221 11335678999999999999 99999887
Q ss_pred ecC
Q 017363 299 LPD 301 (373)
Q Consensus 299 ~~~ 301 (373)
...
T Consensus 207 ~~~ 209 (235)
T 3lcc_A 207 NPH 209 (235)
T ss_dssp CTT
T ss_pred cCC
Confidence 754
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.9e-09 Score=94.73 Aligned_cols=169 Identities=11% Similarity=0.114 Sum_probs=96.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+... .+. +|+.-|+...-....=+.....+--|..+.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~----------------------~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d-- 98 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH----------------------GAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKA-- 98 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----------------------TCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECC--
T ss_pred CCCEEEEECCCCCHHHHHHHHc----------------------CCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcc--
Confidence 4689999999999888776221 011 677777753222222222221222344433
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+..--+|++++|+|+++.++||+. |...+|+.-++-|+|||
T Consensus 99 -~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~LkpgG 139 (253)
T 3g5l_A 99 -IEDIAIEPDAYNVVLSSLALHYIA--------------------------------------SFDDICKKVYINLKSSG 139 (253)
T ss_dssp -GGGCCCCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred -hhhCCCCCCCeEEEEEchhhhhhh--------------------------------------hHHHHHHHHHHHcCCCc
Confidence 333346789999999999999974 34468888889999999
Q ss_pred eEEEEeccCCCCCCc------cCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 222 LIVFVLFSLPNGVPM------IDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~------~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
++++........... ...+....+ .|.....++.... ....-....|.+|.+|+.+++++.| |++..
T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~ 212 (253)
T 3g5l_A 140 SFIFSVEHPVFTADGRQDWYTDETGNKLHW-----PVDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTLLKNG-FQINS 212 (253)
T ss_dssp EEEEEEECHHHHSSSSCSCEECSSCCEEEE-----EECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHHHHTT-EEEEE
T ss_pred EEEEEeCCCccccCccccceeccCCceEEE-----EeccccccceEEE-eeccccCccEecCHHHHHHHHHHcC-Ceeee
Confidence 999986532100000 000000000 0000001111100 0001134567789999999999999 99988
Q ss_pred EEEecC
Q 017363 296 MDKLPD 301 (373)
Q Consensus 296 le~~~~ 301 (373)
++...+
T Consensus 213 ~~e~~~ 218 (253)
T 3g5l_A 213 VIEPEP 218 (253)
T ss_dssp EECCCC
T ss_pred eecCCC
Confidence 875543
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.89 E-value=8.1e-09 Score=94.53 Aligned_cols=144 Identities=17% Similarity=0.119 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+.+ . + .+|+-.|+...-.. ..+.. --|..+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~--------~----~------------~~v~gvD~s~~~~~-~a~~~----~~~~~~--- 88 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKE--------E----G------------IESIGVDINEDMIK-FCEGK----FNVVKS--- 88 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHH--------H----T------------CCEEEECSCHHHHH-HHHTT----SEEECS---
T ss_pred CCCeEEEEeCCCCHHHHHHHh--------C----C------------CcEEEEECCHHHHH-HHHhh----cceeec---
Confidence 357999999999998876522 1 0 14666676432211 11111 112222
Q ss_pred ccccC--CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 142 SFHGR--LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 142 SFy~r--lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
....- -+|++++|+|+|+.++||+.. .|+..+|+.-.+-|+|
T Consensus 89 d~~~~~~~~~~~~fD~i~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 89 DAIEYLKSLPDKYLDGVMISHFVEHLDP------------------------------------ERLFELLSLCYSKMKY 132 (240)
T ss_dssp CHHHHHHTSCTTCBSEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHBCT
T ss_pred cHHHHhhhcCCCCeeEEEECCchhhCCc------------------------------------HHHHHHHHHHHHHcCC
Confidence 22221 368899999999999999752 1566789999999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||+|++..++.... .. +...+ +. .-..+.++.++++.++++.| |++...+.+
T Consensus 133 gG~l~~~~~~~~~~-----------~~-~~~~~--------~~-------~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 184 (240)
T 3dli_A 133 SSYIVIESPNPTSL-----------YS-LINFY--------ID-------PTHKKPVHPETLKFILEYLG-FRDVKIEFF 184 (240)
T ss_dssp TCCEEEEEECTTSH-----------HH-HHHHT--------TS-------TTCCSCCCHHHHHHHHHHHT-CEEEEEEEE
T ss_pred CcEEEEEeCCcchh-----------HH-HHHHh--------cC-------ccccccCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 99999988763321 11 11100 10 01236678999999999999 999888877
Q ss_pred cC
Q 017363 300 PD 301 (373)
Q Consensus 300 ~~ 301 (373)
.+
T Consensus 185 ~~ 186 (240)
T 3dli_A 185 EE 186 (240)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.89 E-value=6e-09 Score=94.47 Aligned_cols=152 Identities=11% Similarity=0.031 Sum_probs=92.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+.. . -+ +|+..|+...-....-+..+. +--|..+..
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~--------~--------------~~--~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~-- 95 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQE--------H--------------FN--DITCVEASEEAISHAQGRLKD-GITYIHSRF-- 95 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTT--------T--------------CS--CEEEEESCHHHHHHHHHHSCS-CEEEEESCG--
T ss_pred CCcEEEECCCCCHHHHHHHH--------h--------------CC--cEEEEeCCHHHHHHHHHhhhC-CeEEEEccH--
Confidence 35799999999998876621 1 11 466666653322222122222 223444443
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH-hhhccCC
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA-HELVPGG 221 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra-~EL~pGG 221 (373)
..++|++++|+++++.+|||+. |...+|+.-+ +-|+|||
T Consensus 96 --~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 96 --EDAQLPRRYDNIVLTHVLEHID--------------------------------------DPVALLKRINDDWLAEGG 135 (250)
T ss_dssp --GGCCCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHTTEEEEE
T ss_pred --HHcCcCCcccEEEEhhHHHhhc--------------------------------------CHHHHHHHHHHHhcCCCC
Confidence 2346889999999999999975 3336788888 8999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhh----hcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEK----VDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~----~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|++..+..... ..... .+ .|...... .+...--..+.+.++++.++++.| |++.+.+
T Consensus 136 ~l~i~~~~~~~~-----------~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAV-----------SRQIA-VK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCH-----------HHHHH-HH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEcCChHHH-----------HHHHH-HH-----cCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEe
Confidence 999998754321 11111 01 12222110 000111124579999999999999 9998887
Q ss_pred Ee
Q 017363 298 KL 299 (373)
Q Consensus 298 ~~ 299 (373)
.+
T Consensus 198 ~~ 199 (250)
T 2p7i_A 198 GI 199 (250)
T ss_dssp EE
T ss_pred ee
Confidence 54
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.86 E-value=2.2e-08 Score=89.07 Aligned_cols=153 Identities=12% Similarity=0.058 Sum_probs=88.9
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc---CCC-Cccceeecc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT---MPP-SRKYFAFGV 139 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~---l~~-~~~~f~~gv 139 (373)
-+|+|+|||+|..+..+... +..+++.-|+...-....-+. ... .+--|..+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-----------------------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 101 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-----------------------SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD 101 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-----------------------SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB
T ss_pred CEEEEECCCCCHHHHHHHHc-----------------------CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC
Confidence 39999999999988877321 123666667643221111111 111 112233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+..--+|++++|+++++.++||+. |...+|+.-.+-|+|
T Consensus 102 ---~~~~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~p 140 (219)
T 3dlc_A 102 ---VHNIPIEDNYADLIVSRGSVFFWE--------------------------------------DVATAFREIYRILKS 140 (219)
T ss_dssp ---TTBCSSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEE
T ss_pred ---HHHCCCCcccccEEEECchHhhcc--------------------------------------CHHHHHHHHHHhCCC
Confidence 333347889999999999999973 344678888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
||++++...-... ...+.+...+.... .+. . ..+.......+.++++.++++.| |++..+.
T Consensus 141 gG~l~~~~~~~~~----------~~~~~~~~~~~~~~-~~~--~---~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~ 201 (219)
T 3dlc_A 141 GGKTYIGGGFGNK----------ELRDSISAEMIRKN-PDW--K---EFNRKNISQENVERFQNVLDEIG-ISSYEII 201 (219)
T ss_dssp EEEEEEEECCSSH----------HHHHHHHHHHHHHC-TTH--H---HHHHHHSSHHHHHHHHHHHHHHT-CSSEEEE
T ss_pred CCEEEEEeccCcH----------HHHHHHHHHHHHhH-HHH--H---hhhhhccccCCHHHHHHHHHHcC-CCeEEEE
Confidence 9999987532221 12223332222210 000 0 00001123448899999999999 8766555
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-08 Score=91.09 Aligned_cols=143 Identities=14% Similarity=0.097 Sum_probs=93.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
...+|+|+|||+|..+..+.... .|..+++.-|....-....-+.+ ...+-.|..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~---------------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 95 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMV---------------------GEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS 95 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHH---------------------TTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEEecCCCHHHHHHHHHh---------------------CCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec
Confidence 35699999999999998874332 12236777777532221111111 1112234433
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. +..--+|++++|+++++.++||+. |...+|+.-.+-|+
T Consensus 96 d---~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk 134 (219)
T 3dh0_A 96 E---ENKIPLPDNTVDFIFMAFTFHELS--------------------------------------EPLKFLEELKRVAK 134 (219)
T ss_dssp B---TTBCSSCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHHEE
T ss_pred c---cccCCCCCCCeeEEEeehhhhhcC--------------------------------------CHHHHHHHHHHHhC
Confidence 3 333347889999999999999974 33367888889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++........... .......+.++++..+++.| |++.....
T Consensus 135 pgG~l~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 180 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDKG---------------------------------PPPEEVYSEWEVGLILEDAG-IRVGRVVE 180 (219)
T ss_dssp EEEEEEEEEECSSCCSSS---------------------------------CCGGGSCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCeEEEEEEecccccccC---------------------------------CchhcccCHHHHHHHHHHCC-CEEEEEEe
Confidence 999999987765543110 00113458999999999999 99877765
Q ss_pred ec
Q 017363 299 LP 300 (373)
Q Consensus 299 ~~ 300 (373)
+.
T Consensus 181 ~~ 182 (219)
T 3dh0_A 181 VG 182 (219)
T ss_dssp ET
T ss_pred eC
Confidence 54
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.5e-08 Score=91.75 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=92.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvp 140 (373)
...+|+|+|||+|..+..+.+ +..+|+-.|+.. ........ .+--|..+.
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~------------------------~~~~v~gvD~s~----~~~~~a~~~~~~~~~~~d- 84 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN------------------------QGLFVYAVEPSI----VMRQQAVVHPQVEWFTGY- 84 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT------------------------TTCEEEEECSCH----HHHHSSCCCTTEEEECCC-
T ss_pred CCCEEEEEcCcccHHHHHHHh------------------------CCCEEEEEeCCH----HHHHHHHhccCCEEEECc-
Confidence 457999999999998887721 123788888754 11111111 122344333
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+..--+|++++|+|+|+.++||+. |+..+|+.-.+-|+ |
T Consensus 85 --~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk-g 123 (261)
T 3ege_A 85 --AENLALPDKSVDGVISILAIHHFS--------------------------------------HLEKSFQEMQRIIR-D 123 (261)
T ss_dssp --TTSCCSCTTCBSEEEEESCGGGCS--------------------------------------SHHHHHHHHHHHBC-S
T ss_pred --hhhCCCCCCCEeEEEEcchHhhcc--------------------------------------CHHHHHHHHHHHhC-C
Confidence 334346889999999999999974 45578888889999 9
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
|++++..+..+.... .+.. ..+..... .. ..++++.+++. .+++.| |++...+.+.
T Consensus 124 G~~~~~~~~~~~~~~---~~~~---~~~~~~~~---~~-------------~~~~~~~~~~~-~l~~aG-F~~v~~~~~~ 179 (261)
T 3ege_A 124 GTIVLLTFDIRLAQR---IWLY---DYFPFLWE---DA-------------LRFLPLDEQIN-LLQENT-KRRVEAIPFL 179 (261)
T ss_dssp SCEEEEEECGGGCCC---CGGG---GTCHHHHH---HH-------------HTSCCHHHHHH-HHHHHH-CSEEEEEECC
T ss_pred cEEEEEEcCCchhHH---HHHH---HHHHHHhh---hh-------------hhhCCCHHHHH-HHHHcC-CCceeEEEec
Confidence 998888876543221 0110 11111101 11 12678899999 999999 9887777664
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.84 E-value=4.5e-07 Score=83.12 Aligned_cols=147 Identities=12% Similarity=0.019 Sum_probs=87.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~-~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... ..+++.-|+...-.... +....- .+--|..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-----------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-----------------------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-----------------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-----------------------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 34699999999999888773321 01456666543211111 111110 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ ++.. +.+++++|+|+|..++||+... ..+|+.-.+-|
T Consensus 93 ~---d~~~-~~~~~~fD~V~~~~~~~~~~~~--------------------------------------~~~l~~~~r~L 130 (256)
T 1nkv_A 93 N---DAAG-YVANEKCDVAACVGATWIAGGF--------------------------------------AGAEELLAQSL 130 (256)
T ss_dssp S---CCTT-CCCSSCEEEEEEESCGGGTSSS--------------------------------------HHHHHHHTTSE
T ss_pred C---ChHh-CCcCCCCCEEEECCChHhcCCH--------------------------------------HHHHHHHHHHc
Confidence 3 3333 2237899999999999997632 25677777899
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++..+........ ..+.. .... .....+++.+++..++++.| |++..++
T Consensus 131 kpgG~l~~~~~~~~~~~~~---------~~~~~--------~~~~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 185 (256)
T 1nkv_A 131 KPGGIMLIGEPYWRQLPAT---------EEIAQ--------ACGV-------SSTSDFLTLPGLVGAFDDLG-YDVVEMV 185 (256)
T ss_dssp EEEEEEEEEEEEETTCCSS---------HHHHH--------TTTC-------SCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred CCCeEEEEecCcccCCCCh---------HHHHH--------HHhc-------ccccccCCHHHHHHHHHHCC-CeeEEEE
Confidence 9999999987654322110 00111 1100 01125689999999999999 9876655
Q ss_pred E
Q 017363 298 K 298 (373)
Q Consensus 298 ~ 298 (373)
.
T Consensus 186 ~ 186 (256)
T 1nkv_A 186 L 186 (256)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.9e-08 Score=88.53 Aligned_cols=158 Identities=15% Similarity=0.006 Sum_probs=92.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCccc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSF 143 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSF 143 (373)
.+|+|+|||+|..+..+... . .+++.-|+...- -...+.....+--|..+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-----------~-------------~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~d~--- 99 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-----------A-------------DRVTALDGSAEM-IAEAGRHGLDNVEFRQQDL--- 99 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-----------S-------------SEEEEEESCHHH-HHHHGGGCCTTEEEEECCT---
T ss_pred CeEEEECCCCCHHHHHHHhc-----------C-------------CeEEEEeCCHHH-HHHHHhcCCCCeEEEeccc---
Confidence 49999999999988877332 0 156666764322 1122221111223444443
Q ss_pred ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeE
Q 017363 144 HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLI 223 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 223 (373)
. .++|++++|+++++.++||+.. | ++..+|+.-.+-|+|||++
T Consensus 100 ~-~~~~~~~~D~v~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~~~L~pgG~l 142 (218)
T 3ou2_A 100 F-DWTPDRQWDAVFFAHWLAHVPD-D-----------------------------------RFEAFWESVRSAVAPGGVV 142 (218)
T ss_dssp T-SCCCSSCEEEEEEESCGGGSCH-H-----------------------------------HHHHHHHHHHHHEEEEEEE
T ss_pred c-cCCCCCceeEEEEechhhcCCH-H-----------------------------------HHHHHHHHHHHHcCCCeEE
Confidence 3 3389999999999999999752 1 3446888888999999999
Q ss_pred EEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 224 VFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 224 vl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
++...++...... ..+......... ..+. .-..+.....+++.+|+.+++++.| |+|+..+..
T Consensus 143 ~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 143 EFVDVTDHERRLE---------QQDDSEPEVAVR-RTLQ--DGRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp EEEEECCCC---------------------CEEE-EECT--TSCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEeCCCCccccc---------hhhhccccccee-eecC--CcchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 9999887432110 000000000000 0000 0001111234679999999999999 998776654
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.8e-08 Score=93.47 Aligned_cols=101 Identities=17% Similarity=0.274 Sum_probs=68.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC-ccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS-RKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~-~~~f~~gvpg 141 (373)
.-+|+|+|||+|..|..+.. .. .+|+-.|+... ..+..... +-.|..+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~--------~~----------------~~v~gvD~s~~----ml~~a~~~~~v~~~~~--- 88 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAE--------FF----------------ERVHAVDPGEA----QIRQALRHPRVTYAVA--- 88 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHT--------TC----------------SEEEEEESCHH----HHHTCCCCTTEEEEEC---
T ss_pred CCCEEEEcCCCCHHHHHHHH--------hC----------------CEEEEEeCcHH----hhhhhhhcCCceeehh---
Confidence 35899999999999887721 11 15677776432 22222221 2234433
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
++..--+|++|+|+|+|+.++||+. . ..||+.-++-|||||
T Consensus 89 ~~e~~~~~~~sfD~v~~~~~~h~~~-~--------------------------------------~~~~~e~~rvLkpgG 129 (257)
T 4hg2_A 89 PAEDTGLPPASVDVAIAAQAMHWFD-L--------------------------------------DRFWAELRRVARPGA 129 (257)
T ss_dssp CTTCCCCCSSCEEEEEECSCCTTCC-H--------------------------------------HHHHHHHHHHEEEEE
T ss_pred hhhhhcccCCcccEEEEeeehhHhh-H--------------------------------------HHHHHHHHHHcCCCC
Confidence 3445557999999999999999964 1 146666778899999
Q ss_pred eEEEEeccCCCC
Q 017363 222 LIVFVLFSLPNG 233 (373)
Q Consensus 222 ~lvl~~~g~~~~ 233 (373)
+|++...+....
T Consensus 130 ~l~~~~~~~~~~ 141 (257)
T 4hg2_A 130 VFAAVTYGLTRV 141 (257)
T ss_dssp EEEEEEECCCBC
T ss_pred EEEEEECCCCCC
Confidence 999998876544
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=5.9e-07 Score=85.59 Aligned_cols=160 Identities=14% Similarity=0.119 Sum_probs=91.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~ 137 (373)
...+|+|+|||+|..+..+.... . .+|+.-|+...-....=+.+ .. .+--|..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~--------~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF--------D---------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 146 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------C---------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHC--------C---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 35699999999999888774321 0 14555555332211111111 10 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. ..+ | +++|+++|+.++|++.. .|...+|+.-.+-|
T Consensus 147 ~d~----~~~-~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 147 QGW----EDF-A-EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIM 184 (318)
T ss_dssp SCG----GGC-C-CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHS
T ss_pred CCh----HHC-C-CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhc
Confidence 332 122 4 78999999999999742 15557888888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcc-cccCCHHHHHHHHHhcCceEEeEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIP-LYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P-~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
+|||++++..+...+............+. ...+.+...+ ..+| .+.|+.+++...+++.| |++...
T Consensus 185 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~ 251 (318)
T 2fk8_A 185 PADGRMTVQSSVSYHPYEMAARGKKLSFE--TARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEP 251 (318)
T ss_dssp CTTCEEEEEEEECCCHHHHHTTCHHHHHH--HHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCC
T ss_pred CCCcEEEEEEeccCCchhhhhcccccccc--ccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEE
Confidence 99999999998865431100000000000 0011111111 1122 36689999999999999 988776
Q ss_pred EEe
Q 017363 297 DKL 299 (373)
Q Consensus 297 e~~ 299 (373)
+.+
T Consensus 252 ~~~ 254 (318)
T 2fk8_A 252 LSL 254 (318)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.81 E-value=2.3e-08 Score=91.56 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=91.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvp 140 (373)
...+|+|+|||+|..+..+.... . -+|+.-|....-....-+.+.. .+--|..+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-------~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-- 147 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-------Y----------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILA-- 147 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-------C----------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEES--
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-------c----------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEc--
Confidence 46799999999999988774331 0 0355555532221111111211 11123333
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.+..--+|++++|+++++.++||++. .|+..+|+.-.+-|+||
T Consensus 148 -d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkpg 190 (254)
T 1xtp_A 148 -SMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTPN 190 (254)
T ss_dssp -CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred -cHHHCCCCCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 23333367889999999999999752 14557888888999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
|++++........... .....+.+.++.++++.++++.| |++.+.+...
T Consensus 191 G~l~i~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~ 239 (254)
T 1xtp_A 191 GYIFFKENCSTGDRFL------------------------------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQE 239 (254)
T ss_dssp EEEEEEEEBC--CCEE------------------------------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEECT
T ss_pred eEEEEEecCCCcccce------------------------------ecccCCcccCCHHHHHHHHHHCC-CEEEEeeecC
Confidence 9999988643321110 00112335789999999999999 9988877653
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.81 E-value=8.4e-08 Score=93.27 Aligned_cols=151 Identities=17% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-CCC-ccceeec
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-PPS-RKYFAFG 138 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~~~-~~~f~~g 138 (373)
++..+|+|+|||+|..+..+.. ++ |..+++.-|+|.. +-+.. ... ..--+.-
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~~----~~~~~~~~~~~~~~v~~ 236 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLR--------EH--------------PGLQGVLLDRAEV----VARHRLDAPDVAGRWKV 236 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHH--------HC--------------TTEEEEEEECHHH----HTTCCCCCGGGTTSEEE
T ss_pred cCCceEEEECCccCHHHHHHHH--------HC--------------CCCEEEEecCHHH----hhcccccccCCCCCeEE
Confidence 3568999999999998887732 21 3457888888631 11111 110 0111334
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+.|+|+ .-+| ++|+++++.+||+++.. +...+|+.-++-|+
T Consensus 237 ~~~d~~-~~~p--~~D~v~~~~vlh~~~d~------------------------------------~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 237 VEGDFL-REVP--HADVHVLKRILHNWGDE------------------------------------DSVRILTNCRRVMP 277 (348)
T ss_dssp EECCTT-TCCC--CCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHTCC
T ss_pred EecCCC-CCCC--CCcEEEEehhccCCCHH------------------------------------HHHHHHHHHHHhcC
Confidence 556676 4456 99999999999975421 33478888999999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++.-...++... .. +....+ +.-|+..|- ..+|.+|+++++++.| |++.++..
T Consensus 278 pgG~l~i~e~~~~~~~~---~~----~~~~~d-~~~~~~~~~-------------~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 278 AHGRVLVIDAVVPEGND---AH----QSKEMD-FMMLAARTG-------------QERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp TTCEEEEEECCBCSSSS---CC----HHHHHH-HHHHHTTSC-------------CCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCEEEEEEeccCCCCC---cc----hhhhcC-hhhhhcCCC-------------cCCCHHHHHHHHHHCC-CceEEEEE
Confidence 99999987665443311 01 111111 111222221 4678999999999999 99877664
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.7e-08 Score=86.99 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+.. . + .+++..|....-....-+.. .-+..+...
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~--------~---------------~-~~~~~~D~~~~~~~~~~~~~----~~~~~~d~~ 83 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKE--------N---------------G-TRVSGIEAFPEAAEQAKEKL----DHVVLGDIE 83 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHT--------T---------------T-CEEEEEESSHHHHHHHHTTS----SEEEESCTT
T ss_pred CCCcEEEeCCCCCHHHHHHHh--------c---------------C-CeEEEEeCCHHHHHHHHHhC----CcEEEcchh
Confidence 457999999999998876621 1 1 26777776532222111111 112222221
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.+ ..-+|++++|+++++.++|++.. ...+|+.-.+-|+|||
T Consensus 84 ~~-~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~~gG 124 (230)
T 3cc8_A 84 TM-DMPYEEEQFDCVIFGDVLEHLFD--------------------------------------PWAVIEKVKPYIKQNG 124 (230)
T ss_dssp TC-CCCSCTTCEEEEEEESCGGGSSC--------------------------------------HHHHHHHTGGGEEEEE
T ss_pred hc-CCCCCCCccCEEEECChhhhcCC--------------------------------------HHHHHHHHHHHcCCCC
Confidence 11 13357789999999999999753 2257777788999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecC
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~ 301 (373)
++++..+..... ..+. .+........+.-..-.....+.+.+|+..++++.| |++..++.+..
T Consensus 125 ~l~~~~~~~~~~------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 187 (230)
T 3cc8_A 125 VILASIPNVSHI------------SVLA----PLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYV 187 (230)
T ss_dssp EEEEEEECTTSH------------HHHH----HHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred EEEEEeCCcchH------------HHHH----HHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEeccc
Confidence 999988654321 1111 111111110000000012235679999999999999 99988887643
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.78 E-value=6.1e-08 Score=88.07 Aligned_cols=146 Identities=13% Similarity=0.104 Sum_probs=93.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-CCCccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-PPSRKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~~~~~~f~~gvpg 141 (373)
..+|+|+|||+|..+..+... ..+++.-|+...- -...+.. ...+--|..+..
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~-~~~a~~~~~~~~~~~~~~d~- 107 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT------------------------GYKAVGVDISEVM-IQKGKERGEGPDLSFIKGDL- 107 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT------------------------TCEEEEEESCHHH-HHHHHTTTCBTTEEEEECBT-
T ss_pred CCeEEEEcCCCCHHHHHHHHc------------------------CCeEEEEECCHHH-HHHHHhhcccCCceEEEcch-
Confidence 469999999999988876321 0156666764322 1222221 111223444433
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..--+|++++|+++++.++||+. |...+|+.-.+-|+|||
T Consensus 108 --~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG 147 (242)
T 3l8d_A 108 --SSLPFENEQFEAIMAINSLEWTE--------------------------------------EPLRALNEIKRVLKSDG 147 (242)
T ss_dssp --TBCSSCTTCEEEEEEESCTTSSS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred --hcCCCCCCCccEEEEcChHhhcc--------------------------------------CHHHHHHHHHHHhCCCe
Confidence 33346889999999999999974 33367888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
++++...+........ . +..+ ..........+.++++.++++.| |++...+.+
T Consensus 148 ~l~i~~~~~~~~~~~~------~-------~~~~-----------~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 148 YACIAILGPTAKPREN------S-------YPRL-----------YGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEEECTTCGGGGG------G-------GGGG-----------GTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEEEcCCcchhhhh------h-------hhhh-----------ccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 9999997755332100 0 0011 11223456689999999999999 998887744
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.4e-08 Score=88.27 Aligned_cols=156 Identities=16% Similarity=0.148 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+... ..+++.-|+...-. ...+.. ....+..+....
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~~-~~a~~~--~~~~~~~~~~~~ 105 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR------------------------GIEAVGVDGDRTLV-DAARAA--GAGEVHLASYAQ 105 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT------------------------TCEEEEEESCHHHH-HHHHHT--CSSCEEECCHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHC------------------------CCEEEEEcCCHHHH-HHHHHh--cccccchhhHHh
Confidence 489999999999888766221 11566777653221 112221 122233333222
Q ss_pred cccCC-CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 143 FHGRL-FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 143 Fy~rl-fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+-... .+.+++|+++++.++| .. |...+|+.-++-|+|||
T Consensus 106 ~~~~~~~~~~~fD~v~~~~~l~-~~--------------------------------------~~~~~l~~~~~~L~pgG 146 (227)
T 3e8s_A 106 LAEAKVPVGKDYDLICANFALL-HQ--------------------------------------DIIELLSAMRTLLVPGG 146 (227)
T ss_dssp HHTTCSCCCCCEEEEEEESCCC-SS--------------------------------------CCHHHHHHHHHTEEEEE
T ss_pred hcccccccCCCccEEEECchhh-hh--------------------------------------hHHHHHHHHHHHhCCCe
Confidence 22223 3555699999999999 22 23367888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
++++..+........ ..... |....-.|... .....+++++|.+|++.++++.| |++..++..
T Consensus 147 ~l~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 209 (227)
T 3e8s_A 147 ALVIQTLHPWSVADG-DYQDG---------WREESFAGFAG----DWQPMPWYFRTLASWLNALDMAG-LRLVSLQEP 209 (227)
T ss_dssp EEEEEECCTTTTCTT-CCSCE---------EEEECCTTSSS----CCCCEEEEECCHHHHHHHHHHTT-EEEEEEECC
T ss_pred EEEEEecCccccCcc-ccccc---------cchhhhhcccc----CcccceEEEecHHHHHHHHHHcC-CeEEEEecC
Confidence 999999876543211 00000 00000001100 00145678899999999999999 999888753
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.77 E-value=6.6e-08 Score=90.31 Aligned_cols=86 Identities=17% Similarity=0.109 Sum_probs=63.2
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..++|+|+|+.+|||+..-+ .|+...|+.-++-|||||+|++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCH----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 56899999999999975321 15667888889999999999998654
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
..+. . ..|- -.++.+..+.+|+...+++.| |++..++...
T Consensus 200 ~~~~--~--------------------~~g~--------~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 200 RLPS--Y--------------------MVGK--------REFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SCCE--E--------------------EETT--------EEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred cCcc--c--------------------eeCC--------eEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 3211 0 0110 013445679999999999999 9999888764
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.77 E-value=8.3e-08 Score=86.27 Aligned_cols=78 Identities=5% Similarity=0.063 Sum_probs=56.5
Q ss_pred CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 151 SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 151 ~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
+++|++++..++||+.. . |...+|+.-++-|+|||++++.+...
T Consensus 100 ~~fD~v~~~~~l~~l~~---~---------------------------------~~~~~l~~~~r~LkpgG~~~l~~~~~ 143 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPA---D---------------------------------MRERYVQHLEALMPQACSGLLITLEY 143 (203)
T ss_dssp HSEEEEEEESCGGGSCH---H---------------------------------HHHHHHHHHHHHSCSEEEEEEEEESS
T ss_pred CCEEEEEECcchhhCCH---H---------------------------------HHHHHHHHHHHHcCCCcEEEEEEEec
Confidence 78999999999999751 1 33468888889999999966665432
Q ss_pred CCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 231 PNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+.. ...-|.|..+.+|++..++. | |++..++..+
T Consensus 144 ~~~----------------------------------~~~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~ 177 (203)
T 1pjz_A 144 DQA----------------------------------LLEGPPFSVPQTWLHRVMSG-N-WEVTKVGGQD 177 (203)
T ss_dssp CSS----------------------------------SSSSCCCCCCHHHHHHTSCS-S-EEEEEEEESS
T ss_pred Ccc----------------------------------ccCCCCCCCCHHHHHHHhcC-C-cEEEEecccc
Confidence 210 00113355789999999987 7 9998888664
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=4e-07 Score=85.09 Aligned_cols=162 Identities=15% Similarity=0.127 Sum_probs=92.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC----Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP----SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~----~~~~f~~ 137 (373)
...+|+|+|||+|..+..+... . ..+++..|+...-....-+.++. .+--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 120 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA---------G--------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRA 120 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH---------T--------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC---------C--------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEE
Confidence 3479999999999998875321 0 01455556543222111111111 0112333
Q ss_pred ccCcccccCCC-CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 138 GVPGSFHGRLF-PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 138 gvpgSFy~rlf-P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+. +..-.+ +++++|+++++.++||+-..+ .|...+|+.-++-
T Consensus 121 ~d---~~~~~~~~~~~fD~v~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~~~ 163 (298)
T 1ri5_A 121 QD---SYGRHMDLGKEFDVISSQFSFHYAFSTS----------------------------------ESLDIAQRNIARH 163 (298)
T ss_dssp SC---TTTSCCCCSSCEEEEEEESCGGGGGSSH----------------------------------HHHHHHHHHHHHT
T ss_pred CC---ccccccCCCCCcCEEEECchhhhhcCCH----------------------------------HHHHHHHHHHHHh
Confidence 32 222234 688999999999999952111 2556788988999
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcC----------CCCh---hhh-----ccc-CcccccC
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKG----------LIDE---EKV-----DSF-NIPLYFP 276 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eG----------li~~---e~~-----d~f-~~P~y~p 276 (373)
|+|||++++..+.... +...+ .... ... .++. .+. +.. ..|.++.
T Consensus 164 LkpgG~l~~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 228 (298)
T 1ri5_A 164 LRPGGYFIMTVPSRDV-----------ILERY----KQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFV 228 (298)
T ss_dssp EEEEEEEEEEEECHHH-----------HHHHH----HHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECC
T ss_pred cCCCCEEEEEECCHHH-----------HHHHH----ccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCccccc
Confidence 9999999998865321 01100 0000 000 0000 000 000 2345778
Q ss_pred CHHHHHHHHHhcCceEEeEEEEe
Q 017363 277 TAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 277 s~eE~~~~ie~~gsF~I~~le~~ 299 (373)
+.+|++.++++.| |++...+.+
T Consensus 229 ~~~~l~~ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 229 DFTRMVDGFKRLG-LSLVERKGF 250 (298)
T ss_dssp CHHHHHHHHHTTT-EEEEEEEEH
T ss_pred CHHHHHHHHHHcC-CEEEEecCH
Confidence 9999999999999 998887755
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.8e-07 Score=83.94 Aligned_cols=164 Identities=12% Similarity=0.068 Sum_probs=94.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCC------chhhHhhcCCC----C
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGN------DFNTLFQTMPP----S 131 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~N------DFn~lf~~l~~----~ 131 (373)
...+|+|+|||+|..+..+.... . |..+|+--|+... -....=+.+.. .
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~--------g-------------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQV--------G-------------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------C-------------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------C-------------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 34699999999999988773322 1 1236777887654 11211111111 1
Q ss_pred ccceeeccCccccc--CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHH
Q 017363 132 RKYFAFGVPGSFHG--RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAF 209 (373)
Q Consensus 132 ~~~f~~gvpgSFy~--rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~F 209 (373)
+--|..+. .|.. .-+|++++|+++|+.++|++...+ .+
T Consensus 102 ~v~~~~~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~ 141 (275)
T 3bkx_A 102 RLTVHFNT--NLSDDLGPIADQHFDRVVLAHSLWYFASAN--------------------------------------AL 141 (275)
T ss_dssp GEEEECSC--CTTTCCGGGTTCCCSEEEEESCGGGSSCHH--------------------------------------HH
T ss_pred ceEEEECC--hhhhccCCCCCCCEEEEEEccchhhCCCHH--------------------------------------HH
Confidence 11233332 1322 224789999999999999976321 34
Q ss_pred HHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHH-HHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhc
Q 017363 210 LNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGS-CLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERN 288 (373)
Q Consensus 210 L~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~-al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~ 288 (373)
++....-++|||++++.........+. ....++..+.. .+..... +.......++|.+++..++++.
T Consensus 142 ~~~~~~l~~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~s~~~l~~~l~~a 209 (275)
T 3bkx_A 142 ALLFKNMAAVCDHVDVAEWSMQPTALD---QIGHLQAAMIQGLLYAIAP---------SDVANIRTLITPDTLAQIAHDN 209 (275)
T ss_dssp HHHHHHHTTTCSEEEEEEECSSCSSGG---GHHHHHHHHHHHHHHHHSC---------CTTCSCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEecCCCCchh---hhhHHHHHHHHHHHhhccc---------cccccccccCCHHHHHHHHHHC
Confidence 555555566699999998876543221 11112222221 1111111 1122344679999999999999
Q ss_pred CceEEeEEEEe
Q 017363 289 GCFRIERMDKL 299 (373)
Q Consensus 289 gsF~I~~le~~ 299 (373)
| |++.+.+.+
T Consensus 210 G-f~~~~~~~~ 219 (275)
T 3bkx_A 210 T-WTYTAGTIV 219 (275)
T ss_dssp T-CEEEECCCB
T ss_pred C-CeeEEEEEe
Confidence 9 998887766
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.6e-08 Score=94.90 Aligned_cols=164 Identities=10% Similarity=0.028 Sum_probs=96.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---C-ccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---S-RKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~-~~~f~~ 137 (373)
...+|+|+|||+|..++.+... ..+..+|+.-|+...-....-+.+.. . +--|..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~---------------------~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 176 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYS---------------------ACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHR 176 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCT---------------------TCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHh---------------------cCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3578999999999988766100 12234666667643222222111111 1 112333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ .+..-.+| +++|+++++.++||+.... ....||+.-.+-|
T Consensus 177 ~---d~~~~~~~-~~fD~v~~~~~~~~~~~~~-----------------------------------~~~~~l~~~~~~L 217 (305)
T 3ocj_A 177 Q---DAWKLDTR-EGYDLLTSNGLNIYEPDDA-----------------------------------RVTELYRRFWQAL 217 (305)
T ss_dssp C---CGGGCCCC-SCEEEEECCSSGGGCCCHH-----------------------------------HHHHHHHHHHHHE
T ss_pred C---chhcCCcc-CCeEEEEECChhhhcCCHH-----------------------------------HHHHHHHHHHHhc
Confidence 3 33443455 9999999999999965321 2235788888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCC-----chhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSN-----GGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~-----~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
+|||++++...+++........+ ...........+.+....+. ..+++.+|++..+++.| |+
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~aG-F~ 284 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRW------------NALRTHAQTRAQLEEAG-FT 284 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSC------------CCCCCHHHHHHHHHHTT-CE
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhh------------hccCCHHHHHHHHHHCC-CE
Confidence 99999999998765433211111 11111222222222222222 14579999999999999 99
Q ss_pred EeEEEE
Q 017363 293 IERMDK 298 (373)
Q Consensus 293 I~~le~ 298 (373)
+.+++.
T Consensus 285 ~v~~~~ 290 (305)
T 3ocj_A 285 DLRFED 290 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877774
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-08 Score=95.80 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=64.9
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
+|++++|+|+|+.+|||+..-. .|+..+|+.-++-|||||+|++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCCH----------------------------------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6778899999999999976421 156678899999999999999974
Q ss_pred ccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecC
Q 017363 228 FSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~ 301 (373)
.-.... . ..| .-..+.++.+.+|+++++++.| |++..++.+..
T Consensus 216 ~~~~~~-------~---------------~~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~ 258 (289)
T 2g72_A 216 ALEESW-------Y---------------LAG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIM 258 (289)
T ss_dssp EESCCE-------E---------------EET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred ecCcce-------E---------------EcC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeec
Confidence 221110 0 001 0123557789999999999999 99988887653
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.75 E-value=8.2e-08 Score=92.22 Aligned_cols=179 Identities=9% Similarity=0.098 Sum_probs=95.5
Q ss_pred CceEEeeecCCCCcccHHHH-------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC
Q 017363 62 GTFKLADFGCSVGPNTFIAV-------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM 128 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~-------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l 128 (373)
...+|+|+|||+|..+..++ ...|+..++++...+.. .-.....+++...|.....|..-.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~---~~~~~~~~~f~~~d~~~d~~~~~l--- 121 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSG---IKTKYYKFDYIQETIRSDTFVSSV--- 121 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC-------CCCEEEEEECCTTSSSHHHHH---
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcccc---ccccccccchhhhhcccchhhhhh---
Confidence 35799999999998776543 23444445444322100 000001233444555433322100
Q ss_pred CCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHH
Q 017363 129 PPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEA 208 (373)
Q Consensus 129 ~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~ 208 (373)
...+|++++|+|+|..++||+-..+ |...
T Consensus 122 ----------------~~~~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~ 150 (302)
T 2vdw_A 122 ----------------REVFYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYAT 150 (302)
T ss_dssp ----------------HTTCCSSCEEEEEEESCGGGTCSTT-----------------------------------THHH
T ss_pred ----------------hccccCCCeeEEEECchHHHhCCHH-----------------------------------HHHH
Confidence 1125778999999999999964322 2347
Q ss_pred HHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhh-------hcccCcccccCCHHHH
Q 017363 209 FLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEK-------VDSFNIPLYFPTAEEL 281 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-------~d~f~~P~y~ps~eE~ 281 (373)
+|+.-++-|||||+|++.++.+.............++...- .+.....-+.++.+. -..-..|-|+-+.+|+
T Consensus 151 ~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el 229 (302)
T 2vdw_A 151 VMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLP-SSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDI 229 (302)
T ss_dssp HHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSC-TTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHH
T ss_pred HHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccc-cccceeeeccccccccceeeccccCCCceeeeeEHHHH
Confidence 89999999999999999987543211100000000000000 000000000000000 0123456678889999
Q ss_pred HHHHHhcCceEEeEEEEe
Q 017363 282 KAIIERNGCFRIERMDKL 299 (373)
Q Consensus 282 ~~~ie~~gsF~I~~le~~ 299 (373)
++++++.| |++.....+
T Consensus 230 ~~l~~~~G-l~lv~~~~f 246 (302)
T 2vdw_A 230 VRVFNEYG-FVLVDNVDF 246 (302)
T ss_dssp HHHHHHTT-EEEEEEEEH
T ss_pred HHHHHHCC-CEEEEecCh
Confidence 99999999 998777655
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=4.2e-07 Score=86.70 Aligned_cols=149 Identities=12% Similarity=0.029 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~-~~~~f~~ 137 (373)
...+|+|+|||+|..++.+.... . .+|+--|+...--... ++...- .+--|..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~--------~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF--------G---------------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRV 173 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------C---------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc--------C---------------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 45799999999999998874321 0 1455555532211111 111110 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. ..--+|++++|+++++.++||+. + ..+|+.-.+-|
T Consensus 174 ~d~---~~~~~~~~~fD~V~~~~~l~~~~--~-------------------------------------~~~l~~~~~~L 211 (312)
T 3vc1_A 174 CNM---LDTPFDKGAVTASWNNESTMYVD--L-------------------------------------HDLFSEHSRFL 211 (312)
T ss_dssp CCT---TSCCCCTTCEEEEEEESCGGGSC--H-------------------------------------HHHHHHHHHHE
T ss_pred CCh---hcCCCCCCCEeEEEECCchhhCC--H-------------------------------------HHHHHHHHHHc
Confidence 332 33336789999999999999973 2 15777788899
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++...+..+.... ....+..+... . .| ..++.+++..++++.| |++..++
T Consensus 212 kpgG~l~~~~~~~~~~~~~----~~~~~~~~~~~--------~----------~~-~~~s~~~~~~~l~~aG-f~~~~~~ 267 (312)
T 3vc1_A 212 KVGGRYVTITGCWNPRYGQ----PSKWVSQINAH--------F----------EC-NIHSRREYLRAMADNR-LVPHTIV 267 (312)
T ss_dssp EEEEEEEEEEEEECTTTCS----CCHHHHHHHHH--------H----------TC-CCCBHHHHHHHHHTTT-EEEEEEE
T ss_pred CCCcEEEEEEccccccccc----hhHHHHHHHhh--------h----------cC-CCCCHHHHHHHHHHCC-CEEEEEE
Confidence 9999999998776553211 01112222111 1 11 4788999999999999 9988888
Q ss_pred Ee
Q 017363 298 KL 299 (373)
Q Consensus 298 ~~ 299 (373)
.+
T Consensus 268 ~~ 269 (312)
T 3vc1_A 268 DL 269 (312)
T ss_dssp EC
T ss_pred eC
Confidence 65
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.7e-07 Score=89.35 Aligned_cols=100 Identities=12% Similarity=0.195 Sum_probs=65.2
Q ss_pred CCCcceEEEccCccccc-ccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 149 PKSSLHFANSSSSLNWL-SKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 149 P~~Svd~~~Ss~alHWL-S~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
|++++|+|+|+.++||+ ...+ |...+|+.-++-|+|||+|++++
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~-----------------------------------~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYE-----------------------------------QADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHH-----------------------------------HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCHH-----------------------------------HHHHHHHHHHHHhCCCcEEEEec
Confidence 35699999999999997 3322 45578888899999999999998
Q ss_pred ccCCCCCCccCCCchhHHHHHHHHHHHHhh--cC-------CCChhhh------------cccCcccccCCHHHHHHHHH
Q 017363 228 FSLPNGVPMIDSNGGKLYGFLGSCLIDMTT--KG-------LIDEEKV------------DSFNIPLYFPTAEELKAIIE 286 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------li~~e~~------------d~f~~P~y~ps~eE~~~~ie 286 (373)
++.++ +...|..... -| ..+.+.+ .....|.|..+.+++.++++
T Consensus 156 ~~~~~---------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~ 220 (313)
T 3bgv_A 156 PNSFE---------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAK 220 (313)
T ss_dssp ECHHH---------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGG
T ss_pred CChHH---------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHH
Confidence 86421 1111111000 00 0010000 23356778889999999999
Q ss_pred hcCceEEeEEEEe
Q 017363 287 RNGCFRIERMDKL 299 (373)
Q Consensus 287 ~~gsF~I~~le~~ 299 (373)
+.| |++...+.+
T Consensus 221 ~~G-~~~v~~~~f 232 (313)
T 3bgv_A 221 KYN-MKLVYKKTF 232 (313)
T ss_dssp GGT-EEEEEEEEH
T ss_pred HcC-cEEEEecCH
Confidence 999 988877655
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.74 E-value=9.5e-08 Score=90.45 Aligned_cols=227 Identities=13% Similarity=0.093 Sum_probs=116.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcC--CCCcccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTM--PPSRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l--~~~~~~f~ 136 (373)
...+|+|+|||+|..+..+.+.. .+..+|+..|+...-.... ++.. ...+--|.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~---------------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~ 94 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQEL---------------------KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFK 94 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHS---------------------SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC---------------------CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEE
Confidence 46899999999999998885321 0112555556543211111 1111 01112233
Q ss_pred eccCcccccCCCC------CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHH
Q 017363 137 FGVPGSFHGRLFP------KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFL 210 (373)
Q Consensus 137 ~gvpgSFy~rlfP------~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL 210 (373)
.+.. .+--++ .+++|+|+++.++||+ ..+ .+|
T Consensus 95 ~~d~---~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~--------------------------------------~~l 132 (299)
T 3g5t_A 95 ISSS---DDFKFLGADSVDKQKIDMITAVECAHWF-DFE--------------------------------------KFQ 132 (299)
T ss_dssp ECCT---TCCGGGCTTTTTSSCEEEEEEESCGGGS-CHH--------------------------------------HHH
T ss_pred EcCH---HhCCccccccccCCCeeEEeHhhHHHHh-CHH--------------------------------------HHH
Confidence 3322 121233 3899999999999997 322 577
Q ss_pred HHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccccc-CCHHHHHHHHHhcC
Q 017363 211 NARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYF-PTAEELKAIIERNG 289 (373)
Q Consensus 211 ~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~-ps~eE~~~~ie~~g 289 (373)
+.-.+-|+|||+|++...+.+...... .+...+..+.... ...-|++. |..+.+++.+++.|
T Consensus 133 ~~~~~~LkpgG~l~i~~~~~~~~~~~~---------~~~~~~~~~~~~~--------~~~~~~w~~p~~~~~~~~l~~~g 195 (299)
T 3g5t_A 133 RSAYANLRKDGTIAIWGYADPIFPDYP---------EFDDLMIEVPYGK--------QGLGPYWEQPGRSRLRNMLKDSH 195 (299)
T ss_dssp HHHHHHEEEEEEEEEEEEEEEECTTCG---------GGTTHHHHHHHCT--------TTTGGGSCTTHHHHHHTTTTTCC
T ss_pred HHHHHhcCCCcEEEEEecCCccccCcH---------HHHHHHHHhccCc--------ccccchhhchhhHHHHHhhhccC
Confidence 777889999999999766543211100 0111122222210 01234444 88889999999888
Q ss_pred ce-----EEeEEEEecCC-------------CCCC--CCCCHHHHHHhHHHhhh--hHHHh-hhCh--HHHHHHHHHHHH
Q 017363 290 CF-----RIERMDKLPDP-------------PLMR--LKPSPESVTSQIRAVFE--GVVKE-HFGY--DLVDKIFNFFTA 344 (373)
Q Consensus 290 sF-----~I~~le~~~~~-------------~~~~--~~~~~~~~~~~iRa~~e--~~l~~-h~g~--~i~delf~ry~~ 344 (373)
| +=.....+.+. ..+. .......+..++|++.. ...+. .-++ ++++++..++
T Consensus 196 -fp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~-- 272 (299)
T 3g5t_A 196 -LDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKES-- 272 (299)
T ss_dssp -CCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHHH--
T ss_pred -CChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHHH--
Confidence 5 32222233220 1111 01245688889988654 22220 1222 6777766661
Q ss_pred HHHhhccccccccCCCeEEEEEEEEecc
Q 017363 345 KFAENFIFGELIKDHNNVNLFVLLKRVI 372 (373)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~r~~ 372 (373)
+.+.+....-.+..-+-.+++++-||+
T Consensus 273 -l~~~~~~~~~~~~~~~w~~~~~~~rk~ 299 (299)
T 3g5t_A 273 -LRRRPELSTNTKIEVVWNTFYKLGKRV 299 (299)
T ss_dssp -HHHCTTCCTTCCEEEEEEEEEEEEEEC
T ss_pred -HHhccCCCCCCEEEEEecceeeeEecC
Confidence 322222110001112455677777763
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.73 E-value=3.1e-07 Score=82.80 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=64.1
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
+|++++|+++++.++||+. |...+|+.-.+-|+|||++++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVD--------------------------------------DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCTTCEEEEEEESCGGGSS--------------------------------------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhcc--------------------------------------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678999999999999974 23357777788999999999998
Q ss_pred ccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 228 FSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+..... +..+ +..+ ..+ ..+.-...+.+.+++..++++.| |++..+....
T Consensus 140 ~~~~~~-----------~~~~---~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~ 189 (219)
T 1vlm_A 140 VDRESF-----------LGRE---YEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQTL 189 (219)
T ss_dssp ECSSSH-----------HHHH---HHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred eCCccH-----------HHHH---HHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEeccc
Confidence 754321 1111 1111 111 12233456789999999999999 9988877553
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.8e-08 Score=86.80 Aligned_cols=140 Identities=17% Similarity=0.169 Sum_probs=91.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+.+. ..+++.-|+...-....-+.+ +.-+..+ +
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~---d 93 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA------------------------GFDVDATDGSPELAAEASRRL---GRPVRTM---L 93 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHH---TSCCEEC---C
T ss_pred CCcEEEECCCCCHHHHHHHHc------------------------CCeEEEECCCHHHHHHHHHhc---CCceEEe---e
Confidence 469999999999988877321 015667776432222111111 1112222 2
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCe
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 222 (373)
+. .+-+++++|+++++.++|++.. .|+..+|+.-++-|+|||+
T Consensus 94 ~~-~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~ 136 (211)
T 3e23_A 94 FH-QLDAIDAYDAVWAHACLLHVPR------------------------------------DELADVLKLIWRALKPGGL 136 (211)
T ss_dssp GG-GCCCCSCEEEEEECSCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred ec-cCCCCCcEEEEEecCchhhcCH------------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 32 3338899999999999999751 1555788888899999999
Q ss_pred EEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 223 lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+++.+........ +.+...+.+.+.++++.++++.|.|++..++...
T Consensus 137 l~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 137 FYASYKSGEGEGR-------------------------------DKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp EEEEEECCSSCEE-------------------------------CTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred EEEEEcCCCcccc-------------------------------cccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 9998764332211 1112234678999999999999878877776543
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.2e-07 Score=89.95 Aligned_cols=151 Identities=8% Similarity=0.058 Sum_probs=94.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc----CCCCccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT----MPPSRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~----l~~~~~~f~~g 138 (373)
..+|+|+|||+|..+..+.+ ++ |..+++.-|+|. .-...+. .+-... +.-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~--v~~ 233 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLR--------RH--------------PQLTGQIWDLPT--TRDAARKTIHAHDLGGR--VEF 233 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------HC--------------TTCEEEEEECGG--GHHHHHHHHHHTTCGGG--EEE
T ss_pred CCEEEEeCCCcCHHHHHHHH--------hC--------------CCCeEEEEECHH--HHHHHHHHHHhcCCCCc--eEE
Confidence 68999999999998877732 21 234677779863 2222221 111111 233
Q ss_pred cCcccccCC-CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 139 VPGSFHGRL-FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 139 vpgSFy~rl-fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.|+|.... ++++++|+++++.+||+++. .+...+|+.-++-|
T Consensus 234 ~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 234 FEKNLLDARNFEGGAADVVMLNDCLHYFDA------------------------------------REAREVIGHAAGLV 277 (352)
T ss_dssp EECCTTCGGGGTTCCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTE
T ss_pred EeCCcccCcccCCCCccEEEEecccccCCH------------------------------------HHHHHHHHHHHHHc
Confidence 445555543 25677999999999998642 13447888889999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
+|||++++.-...++... ...+..+.....-+...|- ..+|.+|+++++++.| |++.+
T Consensus 278 ~pgG~l~i~e~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------------~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 278 KPGGALLILTMTMNDDRV------TPALSADFSLHMMVNTNHG-------------ELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp EEEEEEEEEEECCCTTSS------SSHHHHHHHHHHHHHSTTC-------------CCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCCEEEEEEeccCCCCC------CCchHHHhhHHHHhhCCCC-------------CcCCHHHHHHHHHHCC-Cceee
Confidence 999999998766554321 1122222222111111111 3578999999999999 98876
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.71 E-value=8.5e-08 Score=94.72 Aligned_cols=111 Identities=19% Similarity=0.212 Sum_probs=71.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc------------CC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT------------MP 129 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~------------l~ 129 (373)
...+|+|+|||+|..++.+.... . +..+|+..|+...-. ...+. +.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~--------~-------------~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~g~~~ 140 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV--------G-------------EHGKVIGVDMLDNQL-EVARKYVEYHAEKFFGSPS 140 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------T-------------TTCEEEEEECCHHHH-HHHHHTHHHHHHHHHSSTT
T ss_pred CCCEEEEecCccCHHHHHHHHHh--------C-------------CCCEEEEEECCHHHH-HHHHHHHHHhhhhcccccC
Confidence 35799999999999988774332 1 123677777643221 11111 11
Q ss_pred CCccceeeccCcccccC---CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcH
Q 017363 130 PSRKYFAFGVPGSFHGR---LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDT 206 (373)
Q Consensus 130 ~~~~~f~~gvpgSFy~r---lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~ 206 (373)
..+--|..+....+-.. -+|++++|+|+|+.++||+. |+
T Consensus 141 ~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~--------------------------------------d~ 182 (383)
T 4fsd_A 141 RSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLST--------------------------------------NK 182 (383)
T ss_dssp CCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCS--------------------------------------CH
T ss_pred CCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCC--------------------------------------CH
Confidence 12223444433221111 57889999999999999965 33
Q ss_pred HHHHHHHHhhhccCCeEEEEeccCCC
Q 017363 207 EAFLNARAHELVPGGLIVFVLFSLPN 232 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g~~~ 232 (373)
..+|+.-.+-|+|||+|++.....+.
T Consensus 183 ~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 183 LALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHcCCCCEEEEEEecccc
Confidence 46788888999999999998776543
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.71 E-value=4.3e-08 Score=89.72 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=91.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC---ccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS---RKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~---~~~f~~g 138 (373)
...+|+|+|||+|..+..+.+.. ..+++..|+...-....=+.+... +--|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 135 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-----------------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC 135 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-----------------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-----------------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc
Confidence 46799999999999888763211 114555565432222111112111 1112222
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.+..-.++++++|+++++.++|++.. | ++..+|+.-.+-|+
T Consensus 136 ---d~~~~~~~~~~fD~v~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 136 ---GLQDFTPEPDSYDVIWIQWVIGHLTD-Q-----------------------------------HLAEFLRRCKGSLR 176 (241)
T ss_dssp ---CGGGCCCCSSCEEEEEEESCGGGSCH-H-----------------------------------HHHHHHHHHHHHEE
T ss_pred ---ChhhcCCCCCCEEEEEEcchhhhCCH-H-----------------------------------HHHHHHHHHHHhcC
Confidence 23333456779999999999999753 1 34468888889999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++......+. . .|+ . .-+.+.++.+++++++++.| |++...+.
T Consensus 177 pgG~l~i~~~~~~~~-~--------~~~-----------~-----------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 224 (241)
T 2ex4_A 177 PNGIIVIKDNMAQEG-V--------ILD-----------D-----------VDSSVCRDLDVVRRIICSAG-LSLLAEER 224 (241)
T ss_dssp EEEEEEEEEEEBSSS-E--------EEE-----------T-----------TTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCeEEEEEEccCCCc-c--------eec-----------c-----------cCCcccCCHHHHHHHHHHcC-CeEEEeee
Confidence 999999987665431 0 000 0 01225569999999999999 99888776
Q ss_pred ec
Q 017363 299 LP 300 (373)
Q Consensus 299 ~~ 300 (373)
..
T Consensus 225 ~~ 226 (241)
T 2ex4_A 225 QE 226 (241)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.1e-07 Score=91.31 Aligned_cols=151 Identities=14% Similarity=0.157 Sum_probs=94.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C---CCCcccee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M---PPSRKYFA 136 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l---~~~~~~f~ 136 (373)
.+..+|+|+|||+|..+..+.. ++ |..+++.-|+|. .-...+. + .-..+ +
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~--~~~~a~~~~~~~~l~~~--v 254 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLD--------AF--------------PGLRGTLLERPP--VAEEARELLTGRGLADR--C 254 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECHH--HHHHHHHHHHHTTCTTT--E
T ss_pred ccCcEEEEeCCCccHHHHHHHH--------HC--------------CCCeEEEEcCHH--HHHHHHHhhhhcCcCCc--e
Confidence 3468999999999987776632 21 234678888842 1111111 1 10111 2
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.-+.++|+ .-+|. ++|++++..+||+.+.. +...+|+.-++-
T Consensus 255 ~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~------------------------------------~~~~~L~~~~~~ 296 (369)
T 3gwz_A 255 EILPGDFF-ETIPD-GADVYLIKHVLHDWDDD------------------------------------DVVRILRRIATA 296 (369)
T ss_dssp EEEECCTT-TCCCS-SCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHTT
T ss_pred EEeccCCC-CCCCC-CceEEEhhhhhccCCHH------------------------------------HHHHHHHHHHHH
Confidence 33445666 44565 89999999999985521 223688888999
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEE
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
|+|||++++.-...++.... ....++. .-|+..|- ..+|.+|+++++++.| |++.++
T Consensus 297 L~pgG~l~i~e~~~~~~~~~----~~~~~d~-----~~~~~~~g-------------~~~t~~e~~~ll~~aG-f~~~~~ 353 (369)
T 3gwz_A 297 MKPDSRLLVIDNLIDERPAA----STLFVDL-----LLLVLVGG-------------AERSESEFAALLEKSG-LRVERS 353 (369)
T ss_dssp CCTTCEEEEEEEBCCSSCCH----HHHHHHH-----HHHHHHSC-------------CCBCHHHHHHHHHTTT-EEEEEE
T ss_pred cCCCCEEEEEEeccCCCCCC----chhHhhH-----HHHhhcCC-------------ccCCHHHHHHHHHHCC-CeEEEE
Confidence 99999999987665543211 0111111 11222221 4589999999999999 998877
Q ss_pred EE
Q 017363 297 DK 298 (373)
Q Consensus 297 e~ 298 (373)
..
T Consensus 354 ~~ 355 (369)
T 3gwz_A 354 LP 355 (369)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1e-06 Score=86.53 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=94.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+.+ ++ |..+++.-|+|. .........+ +.-+.|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~ 253 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVA--------KY--------------PSINAINFDLPH-----VIQDAPAFSG--VEHLGG 253 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECHH-----HHTTCCCCTT--EEEEEC
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------hC--------------CCCEEEEEehHH-----HHHhhhhcCC--CEEEec
Confidence 467999999999998887732 21 344788888852 2222221112 334566
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+|++ -+|++ |+++++.+||+++. .+...+|+.-++-|+|||
T Consensus 254 d~~~-~~p~~--D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG 294 (368)
T 3reo_A 254 DMFD-GVPKG--DAIFIKWICHDWSD------------------------------------EHCLKLLKNCYAALPDHG 294 (368)
T ss_dssp CTTT-CCCCC--SEEEEESCGGGBCH------------------------------------HHHHHHHHHHHHHSCTTC
T ss_pred CCCC-CCCCC--CEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCC
Confidence 7776 56765 99999999996442 134468888899999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh--hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT--TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv--~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
++++.-...++.... . .........-+.-|+ ..| ..+|.+|+++++++.| |++.++...
T Consensus 295 ~l~i~e~~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~g--------------~~rt~~e~~~ll~~AG-F~~v~~~~~ 355 (368)
T 3reo_A 295 KVIVAEYILPPSPDP---S-IATKVVIHTDALMLAYNPGG--------------KERTEKEFQALAMASG-FRGFKVASC 355 (368)
T ss_dssp EEEEEECCCCSSCCC---C-HHHHHHHHHHHHHHHHSSBC--------------CCCCHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEEeccCCCCCC---c-hhhhHHHhhhHHHHhhcCCC--------------ccCCHHHHHHHHHHCC-CeeeEEEEe
Confidence 999876654432211 0 000011111112222 122 4579999999999999 987766543
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-06 Score=86.55 Aligned_cols=151 Identities=18% Similarity=0.135 Sum_probs=95.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+.. ++ |..+++.-|+|. .........+ +.-+.|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~ 251 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAA--------HY--------------PTIKGVNFDLPH-----VISEAPQFPG--VTHVGG 251 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECHH-----HHTTCCCCTT--EEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------HC--------------CCCeEEEecCHH-----HHHhhhhcCC--eEEEeC
Confidence 468999999999998887732 21 344788888852 2222222112 334566
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+|++ -+|.+ |+++++++||.++. .|...+|+.-++-|+|||
T Consensus 252 D~~~-~~p~~--D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG 292 (364)
T 3p9c_A 252 DMFK-EVPSG--DTILMKWILHDWSD------------------------------------QHCATLLKNCYDALPAHG 292 (364)
T ss_dssp CTTT-CCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCTTC
T ss_pred CcCC-CCCCC--CEEEehHHhccCCH------------------------------------HHHHHHHHHHHHHcCCCC
Confidence 7777 56765 99999999995431 144578899999999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHH-HHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYG-FLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~-~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
++++.=...++.... ..... ....-+.-|+ ..|- ..+|.+|+++++++.| |++.++...
T Consensus 293 ~l~i~e~~~~~~~~~-----~~~~~~~~~~d~~m~~~~~~g-------------~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 293 KVVLVQCILPVNPEA-----NPSSQGVFHVDMIMLAHNPGG-------------RERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp EEEEEECCBCSSCCS-----SHHHHHHHHHHHHHHHHCSSC-------------CCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEEeccCCCCCc-----chhhhhHHHhHHHHHhcccCC-------------ccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 999876554432111 01111 1111122221 1121 4578999999999999 988776644
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=6.8e-08 Score=89.41 Aligned_cols=105 Identities=15% Similarity=0.132 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+... . .+|+.-|+...-....-+.++ +--|..+..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~----------------------~--~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~- 102 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS----------------------F--GTVEGLELSADMLAIARRRNP--DAVLHHGDM- 102 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT----------------------S--SEEEEEESCHHHHHHHHHHCT--TSEEEECCT-
T ss_pred CCCcEEEeCCcCCHHHHHHHHc----------------------C--CeEEEEECCHHHHHHHHhhCC--CCEEEECCh-
Confidence 3579999999999988876211 1 156777764322222211222 223444443
Q ss_pred ccccCCCCCCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRLFPKSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.. +-+++++|+++++. ++||+... .|+..+|+.-++-|+||
T Consensus 103 --~~-~~~~~~fD~v~~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 103 --RD-FSLGRRFSAVTCMFSSIGHLAGQ-----------------------------------AELDAALERFAAHVLPD 144 (263)
T ss_dssp --TT-CCCSCCEEEEEECTTGGGGSCHH-----------------------------------HHHHHHHHHHHHTEEEE
T ss_pred --HH-CCccCCcCEEEEcCchhhhcCCH-----------------------------------HHHHHHHHHHHHhcCCC
Confidence 22 22378999999998 99997532 25567899999999999
Q ss_pred CeEEEEeccCC
Q 017363 221 GLIVFVLFSLP 231 (373)
Q Consensus 221 G~lvl~~~g~~ 231 (373)
|+|++.....+
T Consensus 145 G~l~i~~~~~~ 155 (263)
T 3pfg_A 145 GVVVVEPWWFP 155 (263)
T ss_dssp EEEEECCCCCT
T ss_pred cEEEEEeccCh
Confidence 99999865443
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.66 E-value=6.2e-08 Score=87.96 Aligned_cols=168 Identities=18% Similarity=0.202 Sum_probs=92.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+... + .. +++..|+...-....-+.....+--|..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~------------~----------~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~--- 96 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH------------G----------AS-YVLGLDLSEKMLARARAAGPDTGITYERA--- 96 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------T----------CS-EEEEEESCHHHHHHHHHTSCSSSEEEEEC---
T ss_pred CCCEEEEEcCcCCHHHHHHHHC------------C----------CC-eEEEEcCCHHHHHHHHHhcccCCceEEEc---
Confidence 3579999999999988766221 0 00 56666764322222211222212223333
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.+..-.+|++++|+++++.++||+. |...+|+.-++-|+|||
T Consensus 97 d~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG 138 (243)
T 3bkw_A 97 DLDKLHLPQDSFDLAYSSLALHYVE--------------------------------------DVARLFRTVHQALSPGG 138 (243)
T ss_dssp CGGGCCCCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred ChhhccCCCCCceEEEEeccccccc--------------------------------------hHHHHHHHHHHhcCcCc
Confidence 3334346789999999999999974 33367888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhh-hcc---cCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEK-VDS---FNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-~d~---f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
++++..............+.. ..-.. ......+...... ... -....|.+|.+|+..++++.| |++..++
T Consensus 139 ~l~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~ 212 (243)
T 3bkw_A 139 HFVFSTEHPIYMAPARPGWAI---DAEGR--RTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHVE 212 (243)
T ss_dssp EEEEEEECHHHHCCSSCSCEE---CTTSC--EEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEeCCcccccCcCcceee---cCCCc--eEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcC-CEeeeec
Confidence 999987532100000000000 00000 0000000000000 000 034557789999999999999 9988877
Q ss_pred Ee
Q 017363 298 KL 299 (373)
Q Consensus 298 ~~ 299 (373)
..
T Consensus 213 ~~ 214 (243)
T 3bkw_A 213 EF 214 (243)
T ss_dssp EC
T ss_pred cC
Confidence 54
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4.2e-07 Score=87.46 Aligned_cols=150 Identities=17% Similarity=0.087 Sum_probs=92.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C---CCCcccee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M---PPSRKYFA 136 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l---~~~~~~f~ 136 (373)
.+..+|+|+|||+|..+..+.+ .+ |..++..-|+|. .-...+. + .-..+ +
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~--v 221 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLT--------AH--------------EDLSGTVLDLQG--PASAAHRRFLDTGLSGR--A 221 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECHH--HHHHHHHHHHHTTCTTT--E
T ss_pred CCCCEEEEeCCChhHHHHHHHH--------HC--------------CCCeEEEecCHH--HHHHHHHhhhhcCcCcC--e
Confidence 3468999999999987776632 21 223566668852 1111111 1 10111 2
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.-+.++|+ .-+|. ++|++++..+||+++. .+...+|+.-++-
T Consensus 222 ~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~ 263 (332)
T 3i53_A 222 QVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD------------------------------------LSAVAILRRCAEA 263 (332)
T ss_dssp EEEECCTT-SCCCC-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHH
T ss_pred EEecCCCC-CCCCC-CCcEEEEehhhccCCH------------------------------------HHHHHHHHHHHHh
Confidence 33445666 34565 8999999999996542 1344788888999
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEE
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
|+|||++++.-...++..+ ...++... |+..|- ..+|.+|+++++++.| |++.++
T Consensus 264 L~pgG~l~i~e~~~~~~~~------~~~~d~~~-----~~~~~~-------------~~~t~~e~~~ll~~aG-f~~~~~ 318 (332)
T 3i53_A 264 AGSGGVVLVIEAVAGDEHA------GTGMDLRM-----LTYFGG-------------KERSLAELGELAAQAG-LAVRAA 318 (332)
T ss_dssp HTTTCEEEEEECCCC---C------CHHHHHHH-----HHHHSC-------------CCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEeecCCCCCc------cHHHHHHH-----HhhCCC-------------CCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999998765443311 11223221 222221 4679999999999999 998776
Q ss_pred EEe
Q 017363 297 DKL 299 (373)
Q Consensus 297 e~~ 299 (373)
...
T Consensus 319 ~~~ 321 (332)
T 3i53_A 319 HPI 321 (332)
T ss_dssp EEC
T ss_pred EEC
Confidence 643
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.65 E-value=7.6e-07 Score=83.78 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=67.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh---cCCCCccceee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ---TMPPSRKYFAF 137 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~---~l~~~~~~f~~ 137 (373)
.+..+|+|+|||+|..++.+.+. + +...+|+..|+...-....-+ ..+. +--|..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~--------~-------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~ 78 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPL--------L-------------PEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLE 78 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTT--------S-------------CTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHh--------C-------------CCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEE
Confidence 34689999999999988877211 1 112377777875322211111 1111 223444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .+ +-+++++|++++..++|++. |+..+|+.-.+-|
T Consensus 79 ~d~---~~-~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L 116 (284)
T 3gu3_A 79 GDA---TE-IELNDKYDIAICHAFLLHMT--------------------------------------TPETMLQKMIHSV 116 (284)
T ss_dssp SCT---TT-CCCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHTE
T ss_pred cch---hh-cCcCCCeeEEEECChhhcCC--------------------------------------CHHHHHHHHHHHc
Confidence 443 22 33357999999999999975 3446778888899
Q ss_pred ccCCeEEEEecc
Q 017363 218 VPGGLIVFVLFS 229 (373)
Q Consensus 218 ~pGG~lvl~~~g 229 (373)
+|||++++..+.
T Consensus 117 kpgG~l~~~~~~ 128 (284)
T 3gu3_A 117 KKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCCEEEEEecc
Confidence 999999988765
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=6.5e-07 Score=83.72 Aligned_cols=79 Identities=10% Similarity=0.132 Sum_probs=57.9
Q ss_pred CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 151 SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 151 ~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
+++|+|++..+||||. | . +...+++.-++-|+|||+|++..+..
T Consensus 151 ~~FD~V~~~~~l~~l~--~-~---------------------------------~~~~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 151 GKFDRIWDRGALVAIN--P-G---------------------------------DHDRYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp CCEEEEEESSSTTTSC--G-G---------------------------------GHHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred CCEEEEEEhhhhhhCC--H-H---------------------------------HHHHHHHHHHHHcCCCeEEEEEEEec
Confidence 7999999999999974 1 1 33468888889999999998665542
Q ss_pred CCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecC
Q 017363 231 PNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~ 301 (373)
+... ..-|.|..+.+|++..++. + |+|..++.++.
T Consensus 195 ~~~~----------------------------------~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 195 DPTK----------------------------------HAGPPFYVPSAELKRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp CTTS----------------------------------CCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEEC
T ss_pred CCcc----------------------------------CCCCCCCCCHHHHHHHhhC-C-eEEEEEecccc
Confidence 2110 0113355789999999986 5 99999886653
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.63 E-value=5.8e-07 Score=84.99 Aligned_cols=87 Identities=15% Similarity=0.071 Sum_probs=60.3
Q ss_pred CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEE
Q 017363 147 LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 147 lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
.+|.+++|+++++.+|||+..- +...+|+.-++-|+|||+|++.
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 3555689999999999998732 2346788888999999999999
Q ss_pred eccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 227 LFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 227 ~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
.+..+. +. .+..+...+. ..| .|+++++.+|+.+.+ .| |++..
T Consensus 196 ~~~~~~--~~-------~~~~~~~~~~---~~~-----------~~~~~~s~~ei~~~l--~G-~~l~~ 238 (274)
T 2qe6_A 196 SLVDTG--LP-------AQQKLARITR---ENL-----------GEGWARTPEEIERQF--GD-FELVE 238 (274)
T ss_dssp EEBCSS--CH-------HHHHHHHHHH---HHH-----------SCCCCBCHHHHHHTT--TT-CEECT
T ss_pred EecCcc--hH-------HHHHHHHHHH---hcC-----------CCCccCCHHHHHHHh--CC-CeEcc
Confidence 987642 10 1122222222 111 266789999999999 46 88765
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-07 Score=88.41 Aligned_cols=170 Identities=12% Similarity=0.079 Sum_probs=92.8
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC------Cccceeec
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP------SRKYFAFG 138 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~------~~~~f~~g 138 (373)
+|+|+|||+|..+..+... ..+|+..|+...-....-+.+.. .+--|..+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~ 140 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL------------------------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQG 140 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT------------------------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeC
Confidence 9999999999999887421 01455555532221111111111 11123333
Q ss_pred cCcccccCCCCCCcceEEE-ccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 139 VPGSFHGRLFPKSSLHFAN-SSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~-Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
.. .. +-+++++|+|+ ++.++||++. .|...+|+.-++-|
T Consensus 141 d~---~~-~~~~~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L 180 (299)
T 3g2m_A 141 DM---SA-FALDKRFGTVVISSGSINELDE------------------------------------ADRRGLYASVREHL 180 (299)
T ss_dssp BT---TB-CCCSCCEEEEEECHHHHTTSCH------------------------------------HHHHHHHHHHHHHE
T ss_pred ch---hc-CCcCCCcCEEEECCcccccCCH------------------------------------HHHHHHHHHHHHHc
Confidence 33 22 22368999877 5688998652 14557888889999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCC---------------ChhhhcccCcccccCCHHHHH
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLI---------------DEEKVDSFNIPLYFPTAEELK 282 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli---------------~~e~~d~f~~P~y~ps~eE~~ 282 (373)
+|||+|++................ ..|...... .-....... ....+..+...+++.|.+|++
T Consensus 181 ~pgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~ 258 (299)
T 3g2m_A 181 EPGGKFLLSLAMSEAAESEPLERK-QELPGRSGR-RYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVV 258 (299)
T ss_dssp EEEEEEEEEEECCHHHHSCCCCC---------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHH
T ss_pred CCCcEEEEEeecCccccccchhcc-ceeecCCCc-EEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHH
Confidence 999999999987653211000000 000000000 000000000 011122234455678999999
Q ss_pred HHHHhcCceEEeEEEEecC
Q 017363 283 AIIERNGCFRIERMDKLPD 301 (373)
Q Consensus 283 ~~ie~~gsF~I~~le~~~~ 301 (373)
.++++.| |++...+.+..
T Consensus 259 ~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 259 RELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp HHHHHTT-CEEEEEEEECT
T ss_pred HHHHHCC-CEEEEEEecCC
Confidence 9999999 99999887753
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=8.6e-08 Score=95.18 Aligned_cols=145 Identities=14% Similarity=0.201 Sum_probs=91.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC--CCCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM--PPSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l--~~~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+.. . ..+|+--|+..+-.. ..+.. +.....|..+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~--------~----------------g~~v~gvD~s~~~~~-~a~~~~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQE--------A----------------GVRHLGFEPSSGVAA-KAREKGIRVRTDFFEKAT 161 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHH--------T----------------TCEEEEECCCHHHHH-HHHTTTCCEECSCCSHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH--------c----------------CCcEEEECCCHHHHH-HHHHcCCCcceeeechhh
Confidence 457999999999998776622 1 016777777543222 12211 10111222221
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. ..--+|++++|+++|+.+|||+. |...||+.-++-|+|
T Consensus 162 ~---~~l~~~~~~fD~I~~~~vl~h~~--------------------------------------d~~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 162 A---DDVRRTEGPANVIYAANTLCHIP--------------------------------------YVQSVLEGVDALLAP 200 (416)
T ss_dssp H---HHHHHHHCCEEEEEEESCGGGCT--------------------------------------THHHHHHHHHHHEEE
T ss_pred H---hhcccCCCCEEEEEECChHHhcC--------------------------------------CHHHHHHHHHHHcCC
Confidence 1 01114678999999999999975 444788888999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhccc-CcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSF-NIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
||+|++..+...+ +.... .++.+ .-.+.+++.++++.++++.| |++..++.
T Consensus 201 gG~l~i~~~~~~~----------------------~~~~~-----~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~ 252 (416)
T 4e2x_A 201 DGVFVFEDPYLGD----------------------IVAKT-----SFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQR 252 (416)
T ss_dssp EEEEEEEEECHHH----------------------HHHHT-----CGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CeEEEEEeCChHH----------------------hhhhc-----chhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEE
Confidence 9999998654211 11111 01111 23346789999999999999 99988887
Q ss_pred ec
Q 017363 299 LP 300 (373)
Q Consensus 299 ~~ 300 (373)
+.
T Consensus 253 ~~ 254 (416)
T 4e2x_A 253 LP 254 (416)
T ss_dssp EC
T ss_pred cc
Confidence 64
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.6e-07 Score=85.06 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=65.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--Cccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+... ..+++.-|+...-....-+.++. .+--|..+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~------------------------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~- 91 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK------------------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ- 91 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG------------------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC-
T ss_pred CCCeEEEeCCCCCHHHHHHHHC------------------------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec-
Confidence 4569999999999999877321 01456666543221111111110 01122222
Q ss_pred CcccccCCCCCCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 140 PGSFHGRLFPKSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.+..-.+| +++|+++++. ++||+...+ |...+|+.-++-|+
T Consensus 92 --d~~~~~~~-~~fD~v~~~~~~l~~~~~~~-----------------------------------~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 92 --DISNLNIN-RKFDLITCCLDSTNYIIDSD-----------------------------------DLKKYFKAVSNHLK 133 (246)
T ss_dssp --CGGGCCCS-CCEEEEEECTTGGGGCCSHH-----------------------------------HHHHHHHHHHTTEE
T ss_pred --ccccCCcc-CCceEEEEcCccccccCCHH-----------------------------------HHHHHHHHHHHhcC
Confidence 22332244 8999999998 999974322 55578898899999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++.+..
T Consensus 134 pgG~l~~~~~~ 144 (246)
T 1y8c_A 134 EGGVFIFDINS 144 (246)
T ss_dssp EEEEEEEEEEC
T ss_pred CCcEEEEEecC
Confidence 99999998765
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.59 E-value=4e-07 Score=78.36 Aligned_cols=133 Identities=11% Similarity=0.088 Sum_probs=87.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+... .. +++.-|+...-....-+..+ +--|..+.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~-----------------------~~-~v~~vD~s~~~~~~a~~~~~--~v~~~~~d-- 68 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEF-----------------------AT-KLYCIDINVIALKEVKEKFD--SVITLSDP-- 68 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTT-----------------------EE-EEEEECSCHHHHHHHHHHCT--TSEEESSG--
T ss_pred CCCeEEEECCCCCHHHHHHHhh-----------------------cC-eEEEEeCCHHHHHHHHHhCC--CcEEEeCC--
Confidence 4579999999999998877211 11 56777765322222211211 22233333
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.-+|++++|+++++.++||+. |...+|+.-.+-|+|||
T Consensus 69 ----~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG 106 (170)
T 3i9f_A 69 ----KEIPDNSVDFILFANSFHDMD--------------------------------------DKQHVISEVKRILKDDG 106 (170)
T ss_dssp ----GGSCTTCEEEEEEESCSTTCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred ----CCCCCCceEEEEEccchhccc--------------------------------------CHHHHHHHHHHhcCCCC
Confidence 336789999999999999974 23367788889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
++++......+..... ......+.+|++.+++ | |++.+...+.
T Consensus 107 ~l~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~l~--G-f~~~~~~~~~ 149 (170)
T 3i9f_A 107 RVIIIDWRKENTGIGP---------------------------------PLSIRMDEKDYMGWFS--N-FVVEKRFNPT 149 (170)
T ss_dssp EEEEEEECSSCCSSSS---------------------------------CGGGCCCHHHHHHHTT--T-EEEEEEECSS
T ss_pred EEEEEEcCccccccCc---------------------------------hHhhhcCHHHHHHHHh--C-cEEEEccCCC
Confidence 9999987655432100 0013468999999999 7 9987766443
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=7.2e-07 Score=84.97 Aligned_cols=153 Identities=17% Similarity=0.249 Sum_probs=88.6
Q ss_pred CceEEeeecCCC--CcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCch---hhHhhcCCCCcccee
Q 017363 62 GTFKLADFGCSV--GPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDF---NTLFQTMPPSRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~--G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDF---n~lf~~l~~~~~~f~ 136 (373)
+.-+|+|+|||. |.|+..+.+.+ .|..+|+..|....-- ..++...+..+--|+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~---------------------~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v 136 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV---------------------APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYV 136 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH---------------------CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEE
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH---------------------CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEE
Confidence 567999999998 77887764433 1233666666532110 011111111123355
Q ss_pred eccCcccccCCC-C--CCcce-----EEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHH
Q 017363 137 FGVPGSFHGRLF-P--KSSLH-----FANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEA 208 (373)
Q Consensus 137 ~gvpgSFy~rlf-P--~~Svd-----~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~ 208 (373)
.+.-...-.-+- | .+++| .++|+++||||..-. |...
T Consensus 137 ~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-----------------------------------~p~~ 181 (277)
T 3giw_A 137 EADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-----------------------------------DAVG 181 (277)
T ss_dssp ECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG-----------------------------------CHHH
T ss_pred EecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh-----------------------------------hHHH
Confidence 555433210000 1 23444 588999999987431 2335
Q ss_pred HHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhc
Q 017363 209 FLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERN 288 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~ 288 (373)
.|+.-.+-|+|||+|+++.++.+.. + ...+.+.+.+ ...| .|+.++|.+|+.+.++
T Consensus 182 ~l~~l~~~L~PGG~Lvls~~~~d~~-p-------~~~~~~~~~~---~~~g-----------~p~~~rs~~ei~~~f~-- 237 (277)
T 3giw_A 182 IVRRLLEPLPSGSYLAMSIGTAEFA-P-------QEVGRVAREY---AARN-----------MPMRLRTHAEAEEFFE-- 237 (277)
T ss_dssp HHHHHHTTSCTTCEEEEEEECCTTS-H-------HHHHHHHHHH---HHTT-----------CCCCCCCHHHHHHTTT--
T ss_pred HHHHHHHhCCCCcEEEEEeccCCCC-H-------HHHHHHHHHH---HhcC-----------CCCccCCHHHHHHHhC--
Confidence 6777778999999999999886522 1 0122233222 2334 3788999999999995
Q ss_pred CceEEeE
Q 017363 289 GCFRIER 295 (373)
Q Consensus 289 gsF~I~~ 295 (373)
| |++..
T Consensus 238 G-lelve 243 (277)
T 3giw_A 238 G-LELVE 243 (277)
T ss_dssp T-SEECT
T ss_pred C-CcccC
Confidence 6 87654
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.57 E-value=2.7e-07 Score=90.34 Aligned_cols=156 Identities=16% Similarity=0.138 Sum_probs=94.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CCCCc-cceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MPPSR-KYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~~~~-~~f~~gv 139 (373)
+.-+|+|+|||+|..+..+.+ ++ |..+++.-|+|. .-...+. +.... .-=+.-+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQ--------YN--------------KEVEVTIVDLPQ--QLEMMRKQTAGLSGSERIHGH 234 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHH--------HS--------------TTCEEEEEECHH--HHHHHHHHHTTCTTGGGEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------hC--------------CCCEEEEEeCHH--HHHHHHHHHHhcCcccceEEE
Confidence 457999999999998887732 21 334788889852 1122221 11110 0013334
Q ss_pred CcccccC--CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 140 PGSFHGR--LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 140 pgSFy~r--lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
.|+|+.. -+| +++|++++...||.++. .+...+|+.-++-|
T Consensus 235 ~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L 277 (363)
T 3dp7_A 235 GANLLDRDVPFP-TGFDAVWMSQFLDCFSE------------------------------------EEVISILTRVAQSI 277 (363)
T ss_dssp ECCCCSSSCCCC-CCCSEEEEESCSTTSCH------------------------------------HHHHHHHHHHHHHC
T ss_pred EccccccCCCCC-CCcCEEEEechhhhCCH------------------------------------HHHHHHHHHHHHhc
Confidence 5666664 256 89999999999985441 13446888888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHH--hhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDM--TTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~m--v~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
+|||++++.-...++... ....+.... ....| ...+ .-..+|.+|+++++++.| |++.+
T Consensus 278 ~pgG~l~i~e~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~------------~~~~~t~~e~~~ll~~AG-f~~v~ 338 (363)
T 3dp7_A 278 GKDSKVYIMETLWDRQRY-----ETASYCLTQ-ISLYFTAMANG------------NSKMFHSDDLIRCIENAG-LEVEE 338 (363)
T ss_dssp CTTCEEEEEECCTTSCSS-----HHHHHHHHH-HHHHHHHSSCS------------SCCSCCHHHHHHHHHTTT-EEESC
T ss_pred CCCcEEEEEeeccCCccc-----cchhhHHHH-hhhhHHhhhCC------------CCcccCHHHHHHHHHHcC-CeEEE
Confidence 999999887655443221 011111111 11111 1111 124579999999999999 98766
Q ss_pred EE
Q 017363 296 MD 297 (373)
Q Consensus 296 le 297 (373)
+.
T Consensus 339 ~~ 340 (363)
T 3dp7_A 339 IQ 340 (363)
T ss_dssp CC
T ss_pred EE
Confidence 54
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.57 E-value=3.3e-07 Score=87.79 Aligned_cols=154 Identities=14% Similarity=0.078 Sum_probs=92.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CC---CCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MP---PSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~---~~~~~f~~ 137 (373)
+..+|+|+|||+|..+..+.+ .+ |..+++.-|++ ..-...+. +. -..+ +.
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~--~~~~~a~~~~~~~~~~~~--v~ 218 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQ--------HN--------------PNAEIFGVDWA--SVLEVAKENARIQGVASR--YH 218 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHH--------HC--------------TTCEEEEEECH--HHHHHHHHHHHHHTCGGG--EE
T ss_pred CCCEEEEECCCcCHHHHHHHH--------HC--------------CCCeEEEEecH--HHHHHHHHHHHhcCCCcc--eE
Confidence 457999999999987776632 21 23478888886 32222222 11 0111 22
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
-+.+.+...-+|.+ +|+++++..+|.++. .+...+|+.-++-|
T Consensus 219 ~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 261 (335)
T 2r3s_A 219 TIAGSAFEVDYGND-YDLVLLPNFLHHFDV------------------------------------ATCEQLLRKIKTAL 261 (335)
T ss_dssp EEESCTTTSCCCSC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHE
T ss_pred EEecccccCCCCCC-CcEEEEcchhccCCH------------------------------------HHHHHHHHHHHHhC
Confidence 23345554334544 999999999997531 14456888888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++.-...++.... ..+..+...+ -|...+ ....++.+|+++++++.| |++.++.
T Consensus 262 ~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~-~~~~~~------------~~~~~t~~~~~~ll~~aG-f~~~~~~ 321 (335)
T 2r3s_A 262 AVEGKVIVFDFIPNSDRIT------PPDAAAFSLV-MLATTP------------NGDAYTFAEYESMFSNAG-FSHSQLH 321 (335)
T ss_dssp EEEEEEEEEECCCCTTSSC------SHHHHHHHHH-HHHHSS------------SCCCCCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCCcEEEEEeecCCCCcCC------chHHHHHHHH-HHeeCC------------CCCcCCHHHHHHHHHHCC-CCeeeEE
Confidence 9999999887765542110 1122222211 111110 115679999999999999 9877665
Q ss_pred E
Q 017363 298 K 298 (373)
Q Consensus 298 ~ 298 (373)
.
T Consensus 322 ~ 322 (335)
T 2r3s_A 322 S 322 (335)
T ss_dssp C
T ss_pred E
Confidence 3
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=9.1e-07 Score=86.47 Aligned_cols=152 Identities=16% Similarity=0.088 Sum_probs=94.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CCCCccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MPPSRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~~~~~~f~~gvp 140 (373)
..-+|+|+|||+|..++.+ .++ -|.+++..-|+|. --...+. ++....-=+.-++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l--------~~~--------------~p~~~~~~~dlp~--v~~~a~~~~~~~~~~rv~~~~ 234 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKEC--------MSL--------------YPGCKITVFDIPE--VVWTAKQHFSFQEEEQIDFQE 234 (353)
T ss_dssp GCSEEEEETCTTSHHHHHH--------HHH--------------CSSCEEEEEECHH--HHHHHHHHSCC--CCSEEEEE
T ss_pred cCCeEEeeCCCCCHHHHHH--------HHh--------------CCCceeEeccCHH--HHHHHHHhhhhcccCceeeec
Confidence 3468999999999887766 233 2455788889984 1122221 1111111144567
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
|+|+...+| ..|+++....||-.+. .+-..+|+.-++-|+||
T Consensus 235 gD~~~~~~~--~~D~~~~~~vlh~~~d------------------------------------~~~~~iL~~~~~al~pg 276 (353)
T 4a6d_A 235 GDFFKDPLP--EADLYILARVLHDWAD------------------------------------GKCSHLLERIYHTCKPG 276 (353)
T ss_dssp SCTTTSCCC--CCSEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHCCTT
T ss_pred CccccCCCC--CceEEEeeeecccCCH------------------------------------HHHHHHHHHHHhhCCCC
Confidence 889987444 4699999999994331 12346889999999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhh-cCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTT-KGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|++++.=...++... ...+..+.+ +.-|+. .| -.||.+|+++++++.| |++.++.
T Consensus 277 g~lli~e~~~~~~~~------~~~~~~~~d-l~ml~~~~g--------------~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 277 GGILVIESLLDEDRR------GPLLTQLYS-LNMLVQTEG--------------QERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp CEEEEEECCCCTTSC------CCHHHHHHH-HHHHHSSSC--------------CCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEEEeeeCCCCC------CCHHHHHHH-HHHHHhCCC--------------cCCCHHHHHHHHHHCC-CceEEEE
Confidence 999887554433211 111222211 111222 23 3589999999999999 9877654
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.56 E-value=8.9e-07 Score=79.45 Aligned_cols=153 Identities=15% Similarity=0.031 Sum_probs=87.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC--------ccc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS--------RKY 134 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~--------~~~ 134 (373)
..+|+|+|||+|..+..+... .+..+++--|+...-....-+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~----------------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKD----------------------KSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRIS 87 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTS----------------------TTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEE
T ss_pred CCEEEEecCCCCHHHHHHHhc----------------------CCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceE
Confidence 469999999999988877321 12236666666533222221111110 112
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
|..+. +...-++++++|+|+++.++||+.. | ++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~V~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~ 128 (219)
T 3jwg_A 88 LFQSS---LVYRDKRFSGYDAATVIEVIEHLDE-N-----------------------------------RLQAFEKVLF 128 (219)
T ss_dssp EEECC---SSSCCGGGTTCSEEEEESCGGGCCH-H-----------------------------------HHHHHHHHHH
T ss_pred EEeCc---ccccccccCCCCEEEEHHHHHhCCH-H-----------------------------------HHHHHHHHHH
Confidence 33332 2333456789999999999999742 1 4457888889
Q ss_pred hhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHH----HHHHhcCc
Q 017363 215 HELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELK----AIIERNGC 290 (373)
Q Consensus 215 ~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~----~~ie~~gs 290 (373)
+-|+|||.++.+.....+... . .+ ..+.. ...-..+..+.+|++ .++++.|
T Consensus 129 ~~LkpgG~~i~~~~~~~~~~~-~----------------~~-~~~~~------~~~~~~~~~~~~~l~~~~~~l~~~~G- 183 (219)
T 3jwg_A 129 EFTRPQTVIVSTPNKEYNFHY-G----------------NL-FEGNL------RHRDHRFEWTRKEFQTWAVKVAEKYG- 183 (219)
T ss_dssp TTTCCSEEEEEEEBGGGGGCC-C----------------CT------------GGGCCTTSBCHHHHHHHHHHHHHHHT-
T ss_pred HhhCCCEEEEEccchhhhhhh-c----------------cc-Ccccc------cccCceeeecHHHHHHHHHHHHHHCC-
Confidence 999999966555432221110 0 00 00000 001123556899999 7777788
Q ss_pred eEEeEEEEecC
Q 017363 291 FRIERMDKLPD 301 (373)
Q Consensus 291 F~I~~le~~~~ 301 (373)
|+++....-..
T Consensus 184 f~v~~~~~g~~ 194 (219)
T 3jwg_A 184 YSVRFLQIGEI 194 (219)
T ss_dssp EEEEEEEESCC
T ss_pred cEEEEEecCCc
Confidence 98877665543
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.54 E-value=6.6e-07 Score=79.15 Aligned_cols=139 Identities=12% Similarity=0.031 Sum_probs=85.9
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccCcc
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVPGS 142 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvpgS 142 (373)
+|+|+|||+|..+..+... ..+++.-|....-....-+.+.. .+--|..+ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d 84 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL------------------------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS---N 84 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT------------------------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECC---B
T ss_pred CEEEECCCCCHhHHHHHhC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEc---C
Confidence 9999999999998776321 01455666543221111111100 01112222 2
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCe
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGL 222 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 222 (373)
+..--+|++++|+++++. .|| +. .|...+|+.-.+-|+|||+
T Consensus 85 ~~~~~~~~~~fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~ 126 (202)
T 2kw5_A 85 LADFDIVADAWEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGV 126 (202)
T ss_dssp TTTBSCCTTTCSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEE
T ss_pred hhhcCCCcCCccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 233336788999999854 455 10 1445788888899999999
Q ss_pred EEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 223 IVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 223 lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+++......+... ..|. ..-+.++.+.+|++++++ | |++..++...
T Consensus 127 l~~~~~~~~~~~~---------------------~~~~--------~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~ 172 (202)
T 2kw5_A 127 FILEGFAPEQLQY---------------------NTGG--------PKDLDLLPKLETLQSELP--S-LNWLIANNLE 172 (202)
T ss_dssp EEEEEECTTTGGG---------------------TSCC--------SSSGGGCCCHHHHHHHCS--S-SCEEEEEEEE
T ss_pred EEEEEeccccccC---------------------CCCC--------CCcceeecCHHHHHHHhc--C-ceEEEEEEEE
Confidence 9999987553210 0111 123568899999999999 7 9998888664
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=4.2e-07 Score=81.26 Aligned_cols=106 Identities=14% Similarity=0.116 Sum_probs=70.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC-ccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS-RKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~-~~~f~~gv 139 (373)
....+|+|+|||+|..+..+... -.+|+.-|+...-....-+.+... +--|..+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 105 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH------------------------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATD 105 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG------------------------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcc
Confidence 35689999999999988877311 115666666433222222222221 22344444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. ..+.|++++|+++++.++||+...+ ++..+|+.-++-|+|
T Consensus 106 ~----~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------~~~~~l~~~~~~L~p 146 (216)
T 3ofk_A 106 I----LQFSTAELFDLIVVAEVLYYLEDMT-----------------------------------QMRTAIDNMVKMLAP 146 (216)
T ss_dssp T----TTCCCSCCEEEEEEESCGGGSSSHH-----------------------------------HHHHHHHHHHHTEEE
T ss_pred h----hhCCCCCCccEEEEccHHHhCCCHH-----------------------------------HHHHHHHHHHHHcCC
Confidence 3 2333789999999999999977432 445688888899999
Q ss_pred CCeEEEEecc
Q 017363 220 GGLIVFVLFS 229 (373)
Q Consensus 220 GG~lvl~~~g 229 (373)
||++++....
T Consensus 147 gG~l~~~~~~ 156 (216)
T 3ofk_A 147 GGHLVFGSAR 156 (216)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEecC
Confidence 9999998764
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.2e-06 Score=82.25 Aligned_cols=149 Identities=17% Similarity=0.187 Sum_probs=92.3
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---CccceeeccC
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFGVP 140 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~gvp 140 (373)
.+|+|+|||+|..+..+.. ++ |..+++.-|+| .-....=+.+.. ..+ +..+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~--v~~~~ 223 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQ--------AE--------------PSARGVMLDRE-GSLGVARDNLSSLLAGER--VSLVG 223 (334)
T ss_dssp CEEEEETCTTCHHHHHHHH--------HC--------------TTCEEEEEECT-TCTHHHHHHTHHHHHTTS--EEEEE
T ss_pred CEEEEeCCCchHHHHHHHH--------HC--------------CCCEEEEeCcH-HHHHHHHHHHhhcCCCCc--EEEec
Confidence 8999999999987776632 21 23478889994 332222122211 011 23345
Q ss_pred cccccCCCCCCcceEEEccCccc-ccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLN-WLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alH-WLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
++|.+. +| +++|++++...+| | +. .+...+|+.-++-|+|
T Consensus 224 ~d~~~~-~~-~~~D~v~~~~vl~~~-~~------------------------------------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 224 GDMLQE-VP-SNGDIYLLSRIIGDL-DE------------------------------------AASLRLLGNCREAMAG 264 (334)
T ss_dssp SCTTTC-CC-SSCSEEEEESCGGGC-CH------------------------------------HHHHHHHHHHHHHSCT
T ss_pred CCCCCC-CC-CCCCEEEEchhccCC-CH------------------------------------HHHHHHHHHHHHhcCC
Confidence 566663 56 7899999999998 5 21 1224688888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
||++++.-...++.... .+..+.+. .-|. ..| ..+|.+|+++++++.| |++.++..
T Consensus 265 gG~l~i~e~~~~~~~~~-------~~~~~~~~-~~~~~~~~--------------~~~t~~e~~~ll~~aG-f~~~~~~~ 321 (334)
T 2ip2_A 265 DGRVVVIERTISASEPS-------PMSVLWDV-HLFMACAG--------------RHRTTEEVVDLLGRGG-FAVERIVD 321 (334)
T ss_dssp TCEEEEEECCBCSSSCC-------HHHHHHHH-HHHHHHSC--------------CCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCEEEEEEeccCCCCCc-------chhHHhhh-HhHhhCCC--------------cCCCHHHHHHHHHHCC-CceeEEEE
Confidence 99999987655432110 11111111 1111 112 3468999999999999 98877654
Q ss_pred e
Q 017363 299 L 299 (373)
Q Consensus 299 ~ 299 (373)
.
T Consensus 322 ~ 322 (334)
T 2ip2_A 322 L 322 (334)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=7.3e-07 Score=78.16 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=54.3
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++++|+++++.++||++. .|+..+|+.-.+-|+|||++++....
T Consensus 95 ~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCCEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 688999999999999751 14457888888999999998876544
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
..+..+. + ....+..+.+|+++.++. |++...+
T Consensus 139 ~~~~~~~----------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~ 171 (199)
T 2xvm_A 139 DTADYPC----------------------T----------VGFPFAFKEGELRRYYEG---WERVKYN 171 (199)
T ss_dssp CCSSSCC----------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred ccCCcCC----------------------C----------CCCCCccCHHHHHHHhcC---CeEEEec
Confidence 3222110 0 011245688999999874 8887765
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.5e-06 Score=75.54 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=83.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+... ..+++..|....-....-+.++ +--|..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~------------------------~~~v~~~D~~~~~~~~a~~~~~--~~~~~~~--- 96 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ------------------------GHDVLGTDLDPILIDYAKQDFP--EARWVVG--- 96 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHCT--TSEEEEC---
T ss_pred CCCeEEEECCCCCHHHHHHHHC------------------------CCcEEEEcCCHHHHHHHHHhCC--CCcEEEc---
Confidence 3469999999999988876321 0156666654322222211221 1122222
Q ss_pred ccccCCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.+..--+|++++|+++++ ..+|+++. .+...+|+.-.+-|+||
T Consensus 97 d~~~~~~~~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~ 140 (195)
T 3cgg_A 97 DLSVDQISETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGAD 140 (195)
T ss_dssp CTTTSCCCCCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred ccccCCCCCCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCC
Confidence 223333677899999998 78888641 13457888888999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|++++.+.... ..+.+++...+++.| |++..+..
T Consensus 141 G~l~~~~~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 174 (195)
T 3cgg_A 141 GRAVIGFGAGR-------------------------------------------GWVFGDFLEVAERVG-LELENAFE 174 (195)
T ss_dssp EEEEEEEETTS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEES
T ss_pred CEEEEEeCCCC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeec
Confidence 99999764321 157889999999999 98877653
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-06 Score=85.33 Aligned_cols=150 Identities=18% Similarity=0.134 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+. +++ |..+++.-|+| ..-...+.+ .. +..+.|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~--------~~~--------------~~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~ 259 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELII--------SKY--------------PLIKGINFDLP--QVIENAPPL---SG--IEHVGG 259 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC--------------TTCEEEEEECH--HHHTTCCCC---TT--EEEEEC
T ss_pred CCCEEEEeCCCCcHHHHHHH--------HHC--------------CCCeEEEeChH--HHHHhhhhc---CC--CEEEeC
Confidence 45799999999999988773 221 23477777874 212222221 12 344556
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.|+. -+|. +|+++++.+||+++.. +...+|+.-++-|+|||
T Consensus 260 d~~~-~~~~--~D~v~~~~~lh~~~d~------------------------------------~~~~~l~~~~~~L~pgG 300 (372)
T 1fp1_D 260 DMFA-SVPQ--GDAMILKAVCHNWSDE------------------------------------KCIEFLSNCHKALSPNG 300 (372)
T ss_dssp CTTT-CCCC--EEEEEEESSGGGSCHH------------------------------------HHHHHHHHHHHHEEEEE
T ss_pred Cccc-CCCC--CCEEEEecccccCCHH------------------------------------HHHHHHHHHHHhcCCCC
Confidence 7776 4565 8999999999975521 23368888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
++++.-...++.... .....+..+.+.+ -|+ ..| ..++.+|+++++++.| |++.++..
T Consensus 301 ~l~i~e~~~~~~~~~---~~~~~~~~~~d~~-~~~~~~~--------------~~~t~~e~~~ll~~aG-f~~~~~~~ 359 (372)
T 1fp1_D 301 KVIIVEFILPEEPNT---SEESKLVSTLDNL-MFITVGG--------------RERTEKQYEKLSKLSG-FSKFQVAC 359 (372)
T ss_dssp EEEEEEEEECSSCCS---SHHHHHHHHHHHH-HHHHHSC--------------CCEEHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEEEEEeccCCCCcc---chHHHHHHHhhHH-HHhccCC--------------ccCCHHHHHHHHHHCC-CceEEEEE
Confidence 999986544332110 0000011111111 111 223 3469999999999999 98776654
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.48 E-value=2.3e-06 Score=76.72 Aligned_cols=105 Identities=16% Similarity=0.038 Sum_probs=65.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC--------ccc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS--------RKY 134 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~--------~~~ 134 (373)
..+|+|+|||+|..+..+.. .. +..+++.-|+...-....-+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~--------~~--------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLK--------DS--------------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------CT--------------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred CCEEEEeCCCCCHHHHHHHh--------hC--------------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceE
Confidence 46999999999999887732 11 1125666666543322222222110 112
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
|..+. +...-++.+++|+++++.++||+.. | ++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~v~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~ 128 (217)
T 3jwh_A 88 LIQGA---LTYQDKRFHGYDAATVIEVIEHLDL-S-----------------------------------RLGAFERVLF 128 (217)
T ss_dssp EEECC---TTSCCGGGCSCSEEEEESCGGGCCH-H-----------------------------------HHHHHHHHHH
T ss_pred EEeCC---cccccccCCCcCEEeeHHHHHcCCH-H-----------------------------------HHHHHHHHHH
Confidence 33332 2233345689999999999999742 1 4457888888
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||+++++..
T Consensus 129 ~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 129 EFAQPKIVIVTTPN 142 (217)
T ss_dssp TTTCCSEEEEEEEB
T ss_pred HHcCCCEEEEEccC
Confidence 99999997666543
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3.1e-07 Score=84.41 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 151 SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 151 ~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
+++|+|+|+.+||++..-. .|...+|+.-++-|+|||+|++.....
T Consensus 156 ~~fD~v~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDL----------------------------------PAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp CCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred CCccEEEEhhhhhhhcCCh----------------------------------HHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 8999999999999754211 145578888889999999999988432
Q ss_pred CCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 231 PNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
.+. . ..| ....+.+..+.+++..++++.| |++..++...
T Consensus 202 ~~~--~--------------------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~ 240 (265)
T 2i62_A 202 SSY--Y--------------------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVIS 240 (265)
T ss_dssp CCE--E--------------------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred Cce--E--------------------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEec
Confidence 210 0 011 1112345678999999999999 9999888764
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.9e-07 Score=81.60 Aligned_cols=111 Identities=22% Similarity=0.219 Sum_probs=77.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+. .+++..|+... +.-|..+.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~---------------------------~~v~~~D~s~~------------~~~~~~~d-- 105 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR---------------------------NPVHCFDLASL------------DPRVTVCD-- 105 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC---------------------------SCEEEEESSCS------------STTEEESC--
T ss_pred CCCeEEEECCcCCHHHHHhh---------------------------ccEEEEeCCCC------------CceEEEec--
Confidence 34689999999999876650 04556666544 11122222
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+..--+|++++|+++++.++|| . |...+|+.-++-|+|||
T Consensus 106 -~~~~~~~~~~fD~v~~~~~l~~-~--------------------------------------~~~~~l~~~~~~L~~gG 145 (215)
T 2zfu_A 106 -MAQVPLEDESVDVAVFCLSLMG-T--------------------------------------NIRDFLEEANRVLKPGG 145 (215)
T ss_dssp -TTSCSCCTTCEEEEEEESCCCS-S--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred -cccCCCCCCCEeEEEEehhccc-c--------------------------------------CHHHHHHHHHHhCCCCe
Confidence 2233367889999999999997 2 33467777788999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
++++..... .+++.+++..++++.| |++....
T Consensus 146 ~l~i~~~~~-------------------------------------------~~~~~~~~~~~l~~~G-f~~~~~~ 177 (215)
T 2zfu_A 146 LLKVAEVSS-------------------------------------------RFEDVRTFLRAVTKLG-FKIVSKD 177 (215)
T ss_dssp EEEEEECGG-------------------------------------------GCSCHHHHHHHHHHTT-EEEEEEE
T ss_pred EEEEEEcCC-------------------------------------------CCCCHHHHHHHHHHCC-CEEEEEe
Confidence 999974321 1128999999999999 9887654
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=78.67 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=64.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+.... + +++.-|+...-....-+.++ +--|..+..
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~----------------------~--~v~~~D~s~~~~~~a~~~~~--~~~~~~~d~-- 92 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEF----------------------G--DTAGLELSEDMLTHARKRLP--DATLHQGDM-- 92 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHH----------------------S--EEEEEESCHHHHHHHHHHCT--TCEEEECCT--
T ss_pred CCeEEEecccCCHHHHHHHHhC----------------------C--cEEEEeCCHHHHHHHHHhCC--CCEEEECCH--
Confidence 4699999999999988774332 0 45555553222111111111 112333322
Q ss_pred cccCCCCCCcceEEEc-cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 143 FHGRLFPKSSLHFANS-SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~S-s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.. +-+++++|+++| ..++||+...+ |+..+|+.-++-|+|||
T Consensus 93 -~~-~~~~~~~D~v~~~~~~~~~~~~~~-----------------------------------~~~~~l~~~~~~L~pgG 135 (239)
T 3bxo_A 93 -RD-FRLGRKFSAVVSMFSSVGYLKTTE-----------------------------------ELGAAVASFAEHLEPGG 135 (239)
T ss_dssp -TT-CCCSSCEEEEEECTTGGGGCCSHH-----------------------------------HHHHHHHHHHHTEEEEE
T ss_pred -HH-cccCCCCcEEEEcCchHhhcCCHH-----------------------------------HHHHHHHHHHHhcCCCe
Confidence 22 223678999995 55999975322 55678888899999999
Q ss_pred eEEEEeccCC
Q 017363 222 LIVFVLFSLP 231 (373)
Q Consensus 222 ~lvl~~~g~~ 231 (373)
++++.....+
T Consensus 136 ~l~~~~~~~~ 145 (239)
T 3bxo_A 136 VVVVEPWWFP 145 (239)
T ss_dssp EEEECCCCCT
T ss_pred EEEEEeccCc
Confidence 9999876544
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=5.5e-07 Score=87.75 Aligned_cols=152 Identities=15% Similarity=0.119 Sum_probs=89.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C---CC-Ccccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M---PP-SRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l---~~-~~~~f~ 136 (373)
+..+|+|+|||+|..++.+.. .+ |..+++.-|+| .- -...+. + .- .+--|
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~--------~~--------------~~~~~~~~D~~-~~-~~~a~~~~~~~~~~~~v~~- 236 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIAL--------RA--------------PHLRGTLVELA-GP-AERARRRFADAGLADRVTV- 236 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECH-HH-HHHHHHHHHHTTCTTTEEE-
T ss_pred CCCEEEEECCCcCHHHHHHHH--------HC--------------CCCEEEEEeCH-HH-HHHHHHHHHhcCCCCceEE-
Confidence 467999999999987776632 21 23477788873 22 222111 1 10 12223
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+.++|.+ -+|. .+|+++++.++|+++.. +...+|+.-.+-
T Consensus 237 --~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~------------------------------------~~~~~l~~~~~~ 276 (374)
T 1qzz_A 237 --AEGDFFK-PLPV-TADVVLLSFVLLNWSDE------------------------------------DALTILRGCVRA 276 (374)
T ss_dssp --EECCTTS-CCSC-CEEEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHH
T ss_pred --EeCCCCC-cCCC-CCCEEEEeccccCCCHH------------------------------------HHHHHHHHHHHh
Confidence 3445555 3454 49999999999874421 223678888899
Q ss_pred hccCCeEEEEec--cCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEe
Q 017363 217 LVPGGLIVFVLF--SLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIE 294 (373)
Q Consensus 217 L~pGG~lvl~~~--g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~ 294 (373)
|+|||++++.-. ..++... ..+..+...+. ++..|- ..++.+|+++++++.| |++.
T Consensus 277 L~pgG~l~i~e~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~ll~~aG-f~~~ 334 (374)
T 1qzz_A 277 LEPGGRLLVLDRADVEGDGAD-------RFFSTLLDLRM-LTFMGG-------------RVRTRDEVVDLAGSAG-LALA 334 (374)
T ss_dssp EEEEEEEEEEECCH--------------HHHHHHHHHHH-HHHHSC-------------CCCCHHHHHHHHHTTT-EEEE
T ss_pred cCCCcEEEEEechhhcCCCCC-------cchhhhcchHH-HHhCCC-------------cCCCHHHHHHHHHHCC-CceE
Confidence 999999998766 4332211 11222211111 111121 4589999999999999 9988
Q ss_pred EEEEec
Q 017363 295 RMDKLP 300 (373)
Q Consensus 295 ~le~~~ 300 (373)
++....
T Consensus 335 ~~~~~~ 340 (374)
T 1qzz_A 335 SERTSG 340 (374)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 777553
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.45 E-value=3e-07 Score=83.42 Aligned_cols=45 Identities=24% Similarity=0.357 Sum_probs=36.0
Q ss_pred CCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEec
Q 017363 150 KSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 150 ~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
++++|++++.. ++||+...+ |...+|+.-++-|+|||++++.+.
T Consensus 94 ~~~fD~v~~~~~~~~~~~~~~-----------------------------------~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQTEA-----------------------------------DVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SSCEEEEEECTTGGGGCCSHH-----------------------------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEEeCCchhhcCCHH-----------------------------------HHHHHHHHHHHhcCCCeEEEEEcC
Confidence 38899999987 999975322 455788888899999999999775
Q ss_pred c
Q 017363 229 S 229 (373)
Q Consensus 229 g 229 (373)
.
T Consensus 139 ~ 139 (243)
T 3d2l_A 139 S 139 (243)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.6e-06 Score=76.33 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=62.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gvp 140 (373)
..+|+|+|||+|..+..+... .+ +++..|+...-....-+.+. ..+--|..+.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~----------------------~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d- 93 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY----------------------GF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGD- 93 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT----------------------TC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC-
T ss_pred CCeEEEEeccCCHHHHHHHHc----------------------CC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECc-
Confidence 579999999999888766321 01 45555553211111101100 0111233332
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+.+--+|++++|+++++.++|+.. . .|...+|+.-++-|+||
T Consensus 94 --~~~~~~~~~~~D~v~~~~~~~~~~-~-----------------------------------~~~~~~l~~~~~~L~~g 135 (227)
T 1ve3_A 94 --ARKLSFEDKTFDYVIFIDSIVHFE-P-----------------------------------LELNQVFKEVRRVLKPS 135 (227)
T ss_dssp --TTSCCSCTTCEEEEEEESCGGGCC-H-----------------------------------HHHHHHHHHHHHHEEEE
T ss_pred --hhcCCCCCCcEEEEEEcCchHhCC-H-----------------------------------HHHHHHHHHHHHHcCCC
Confidence 223235778999999999955422 1 14457888888999999
Q ss_pred CeEEEEecc
Q 017363 221 GLIVFVLFS 229 (373)
Q Consensus 221 G~lvl~~~g 229 (373)
|++++..+.
T Consensus 136 G~l~~~~~~ 144 (227)
T 1ve3_A 136 GKFIMYFTD 144 (227)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEecC
Confidence 999998775
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-06 Score=81.88 Aligned_cols=113 Identities=15% Similarity=0.189 Sum_probs=70.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CC---Cccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PP---SRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~---~~~~ 134 (373)
...+|+|+|||+|..++.+... + .+|+-.|+...--...-+.. .. .+-.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~------------~------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE------------G------------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT------------T------------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred CCCEEEEecCCCCHHHHHHHHC------------C------------CeEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 3479999999999998877321 0 15677776533222221111 00 0111
Q ss_pred eeeccCcccccCCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
+..+..-.+-..++|++++|+|+|+ .++||+...... ..++..+|+.-
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~ 161 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNI 161 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHH
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHH
Confidence 3333322221233788999999998 899997753211 12566889999
Q ss_pred HhhhccCCeEEEEecc
Q 017363 214 AHELVPGGLIVFVLFS 229 (373)
Q Consensus 214 a~EL~pGG~lvl~~~g 229 (373)
++-|+|||+|++....
T Consensus 162 ~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 162 ASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHTEEEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEeCC
Confidence 9999999999998863
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.7e-06 Score=77.61 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=58.2
Q ss_pred cceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCC
Q 017363 152 SLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 152 Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
++|+++++.++||+.. .|...+|+.-.+-|+|||++++.-++..
T Consensus 124 ~~d~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPV------------------------------------EKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp CSCEEEEESSSTTSCG------------------------------------GGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred CccEEEEcchhhcCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 4899999999999752 1455788888899999999988887654
Q ss_pred CCCCccCCCchhHHHHHHHH-------HHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 232 NGVPMIDSNGGKLYGFLGSC-------LIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~a-------l~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+. ..+..+... +..+...|. .| ...+.+|+.+.+ .| |++..-....
T Consensus 168 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 168 CI---------DFFNSLLEKYGQLPYELLLVMEHGI----------RP-GIFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp HH---------HHHHHHHHHHSSCCHHHHHHHTTTC----------CC-CCCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred cc---------HHHHHHHhCCCCCchhhhhccccCC----------CC-CccCHHHHHHHh--CC-CEEEeccccc
Confidence 32 111111110 111112221 23 346899999999 77 9987766443
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.7e-06 Score=80.95 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=82.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|.++..+... ..+|+..|....-....=+.+.. .+--|..+..
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~------------------------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 176 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL------------------------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDI 176 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCcEEEECCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecc
Confidence 578999999999999877421 01455555543221111111110 0112333322
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.. +.+++++|+++++.++||++. .++..+|+.-.+-|+||
T Consensus 177 ---~~-~~~~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkpg 216 (286)
T 3m70_A 177 ---NA-ANIQENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNVG 216 (286)
T ss_dssp ---GG-CCCCSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEEE
T ss_pred ---cc-ccccCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 22 223789999999999999852 14557888889999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|++++......+..+. . ..+.+..+.+|+++.++. |++...+
T Consensus 217 G~l~i~~~~~~~~~~~----------------------~----------~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 217 GYNLIVAAMSTDDVPC----------------------P----------LPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp EEEEEEEEBCCSSSCC----------------------S----------SCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred cEEEEEEecCCCCCCC----------------------C----------CCccccCCHHHHHHHhcC---CEEEEEE
Confidence 9988876644332110 0 112367788899888753 8877665
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2.1e-06 Score=74.57 Aligned_cols=119 Identities=17% Similarity=0.073 Sum_probs=77.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
..-+|+|+||+... +-+-...++..+++.. . .+++..-|...-+
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~------------~-~~~~~~~d~~~~~--------------------- 55 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQALTG------------N-EGRVSVENIKQLL--------------------- 55 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHHHHTT------------T-TSEEEEEEGGGGG---------------------
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHHHhcc------------c-CcEEEEechhcCc---------------------
Confidence 35789999998743 4455555555555431 0 1344444442100
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
-.-+|++++|+++|+.++||+. | |+..+|+.-++-|||||
T Consensus 56 ---~~~~~~~~fD~V~~~~~l~~~~--~-----------------------------------~~~~~l~~~~r~LkpgG 95 (176)
T 2ld4_A 56 ---QSAHKESSFDIILSGLVPGSTT--L-----------------------------------HSAEILAEIARILRPGG 95 (176)
T ss_dssp ---GGCCCSSCEEEEEECCSTTCCC--C-----------------------------------CCHHHHHHHHHHEEEEE
T ss_pred ---cccCCCCCEeEEEECChhhhcc--c-----------------------------------CHHHHHHHHHHHCCCCE
Confidence 0114789999999999999982 1 22367888889999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIE 294 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~ 294 (373)
+|++....... .+ -+.|.++.+|+...+++.| | |+
T Consensus 96 ~l~~~~~~~~~-------------------------~~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 96 CLFLKEPVETA-------------------------VD-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEEEEEESS-------------------------SC-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred EEEEEcccccc-------------------------cc-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 99995332110 00 0557788999999999999 8 66
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.4e-06 Score=84.50 Aligned_cols=152 Identities=17% Similarity=0.106 Sum_probs=91.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cC---CC-Ccccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TM---PP-SRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l---~~-~~~~f~ 136 (373)
+..+|+|+|||+|..+..+.. .+ |.++++.-|+| .- -...+ .+ .- .+--|
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~--------~~--------------~~~~~~~~D~~-~~-~~~a~~~~~~~~~~~~v~~- 237 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIAR--------RA--------------PHVSATVLEMA-GT-VDTARSYLKDEGLSDRVDV- 237 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------HC--------------TTCEEEEEECT-TH-HHHHHHHHHHTTCTTTEEE-
T ss_pred cCcEEEEeCCcCcHHHHHHHH--------hC--------------CCCEEEEecCH-HH-HHHHHHHHHhcCCCCceEE-
Confidence 457999999999998877732 21 23477778883 22 22222 11 11 12223
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+.++|.+ -+|. .+|+++++..+|.++. .+...+|+.-++-
T Consensus 238 --~~~d~~~-~~~~-~~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~ 277 (360)
T 1tw3_A 238 --VEGDFFE-PLPR-KADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEA 277 (360)
T ss_dssp --EECCTTS-CCSS-CEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHT
T ss_pred --EeCCCCC-CCCC-CccEEEEcccccCCCH------------------------------------HHHHHHHHHHHHh
Confidence 3345554 3454 4999999999986431 1234688888899
Q ss_pred hccCCeEEEEecc-CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 217 LVPGGLIVFVLFS-LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 217 L~pGG~lvl~~~g-~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
|+|||++++.-.. .++... ..+..+.+. .-|+..|- ..++.+|+++++++.| |++.+
T Consensus 278 L~pgG~l~i~e~~~~~~~~~-------~~~~~~~~~-~~~~~~~~-------------~~~t~~e~~~ll~~aG-f~~~~ 335 (360)
T 1tw3_A 278 LEPGGRILIHERDDLHENSF-------NEQFTELDL-RMLVFLGG-------------ALRTREKWDGLAASAG-LVVEE 335 (360)
T ss_dssp EEEEEEEEEEECCBCGGGCC-------SHHHHHHHH-HHHHHHSC-------------CCCBHHHHHHHHHHTT-EEEEE
T ss_pred cCCCcEEEEEEEeccCCCCC-------cchhhhccH-HHhhhcCC-------------cCCCHHHHHHHHHHCC-CeEEE
Confidence 9999999987655 332211 011111111 11122221 4579999999999999 99887
Q ss_pred EEEec
Q 017363 296 MDKLP 300 (373)
Q Consensus 296 le~~~ 300 (373)
+....
T Consensus 336 ~~~~~ 340 (360)
T 1tw3_A 336 VRQLP 340 (360)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 76553
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=85.02 Aligned_cols=149 Identities=14% Similarity=0.065 Sum_probs=91.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+.. ++ |..+++.-|+| ..-...+.+ .. +.-+.|+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~--------~~--------------p~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d 244 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHE--------IF--------------PHLKCTVFDQP--QVVGNLTGN---EN--LNFVGGD 244 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHH--------HC--------------TTSEEEEEECH--HHHSSCCCC---SS--EEEEECC
T ss_pred CCEEEEECCCcCHHHHHHHH--------HC--------------CCCeEEEeccH--HHHhhcccC---CC--cEEEeCc
Confidence 46999999999998887732 21 23366777885 211111111 22 4445677
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc---
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP--- 219 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p--- 219 (373)
|+. -+| ++|+++++..||+++.. +...+|+.-.+-|+|
T Consensus 245 ~~~-~~~--~~D~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~p~~~ 285 (358)
T 1zg3_A 245 MFK-SIP--SADAVLLKWVLHDWNDE------------------------------------QSLKILKNSKEAISHKGK 285 (358)
T ss_dssp TTT-CCC--CCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHTGGGGG
T ss_pred cCC-CCC--CceEEEEcccccCCCHH------------------------------------HHHHHHHHHHHhCCCCCC
Confidence 777 456 49999999999985521 233688888899999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
||++++.-...++...... ......+.+. .-|+ ..| ..+|.+|+++++++.| |++.++..
T Consensus 286 gG~l~i~e~~~~~~~~~~~---~~~~~~~~d~-~~~~~~~g--------------~~~t~~e~~~ll~~aG-f~~~~~~~ 346 (358)
T 1zg3_A 286 DGKVIIIDISIDETSDDRG---LTELQLDYDL-VMLTMFLG--------------KERTKQEWEKLIYDAG-FSSYKITP 346 (358)
T ss_dssp GCEEEEEECEECTTCSCHH---HHHHHHHHHH-HHHHHHSC--------------CCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CcEEEEEEeccCCCCccch---hhhHHHhhCH-HHhccCCC--------------CCCCHHHHHHHHHHcC-CCeeEEEe
Confidence 9999987655433211000 0001111111 1111 122 3579999999999999 98776654
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.7e-06 Score=76.93 Aligned_cols=136 Identities=18% Similarity=0.143 Sum_probs=82.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+ .+ . +++..|....-....-+.. .+--|..+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----------~~--------------~--~v~~vD~s~~~~~~a~~~~--~~~~~~~~d-- 85 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----------PY--------------P--QKVGVEPSEAMLAVGRRRA--PEATWVRAW-- 85 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----------CC--------------S--EEEEECCCHHHHHHHHHHC--TTSEEECCC--
T ss_pred CCCeEEEECCCCCHhHHhC----------CC--------------C--eEEEEeCCHHHHHHHHHhC--CCcEEEEcc--
Confidence 3569999999999877654 00 0 4566665432222211111 111233332
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
+..--+|++++|+++++.++||+. |...+|+.-.+-|+|||
T Consensus 86 -~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG 126 (211)
T 2gs9_A 86 -GEALPFPGESFDVVLLFTTLEFVE--------------------------------------DVERVLLEARRVLRPGG 126 (211)
T ss_dssp -TTSCCSCSSCEEEEEEESCTTTCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred -cccCCCCCCcEEEEEEcChhhhcC--------------------------------------CHHHHHHHHHHHcCCCC
Confidence 223336788999999999999975 23367777888999999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcC
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNG 289 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~g 289 (373)
++++..+...+ .|..+. ..+...|.. ..-...+.|.+|++++++ |
T Consensus 127 ~l~i~~~~~~~-----------~~~~~~---~~~~~~~~~-------~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 127 ALVVGVLEALS-----------PWAALY---RRLGEKGVL-------PWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEEEECTTS-----------HHHHHH---HHHHHTTCT-------TGGGCCCCCHHHHHHHHC--S
T ss_pred EEEEEecCCcC-----------cHHHHH---HHHhhccCc-------cccccccCCHHHHHHHhc--C
Confidence 99999886542 122211 112122321 111235679999999999 7
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-06 Score=84.01 Aligned_cols=153 Identities=13% Similarity=0.166 Sum_probs=93.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cC---CCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TM---PPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l---~~~~~~f~~ 137 (373)
+..+|+|+|||+|..+..+... + |..+++.-|+| .- -...+ .+ .-... +.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~--------~--------------p~~~~~~~D~~-~~-~~~a~~~~~~~~~~~~--v~ 243 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKH--------F--------------PELDSTILNLP-GA-IDLVNENAAEKGVADR--MR 243 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHH--------C--------------TTCEEEEEECG-GG-HHHHHHHHHHTTCTTT--EE
T ss_pred CCCEEEEECCcccHHHHHHHHH--------C--------------CCCeEEEEecH-HH-HHHHHHHHHhcCCCCC--EE
Confidence 4579999999999988877332 1 23477888883 22 22222 11 11111 22
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
-+.++|....+|+. |+++++..+|.++. .+...+|+.-++-|
T Consensus 244 ~~~~d~~~~~~~~~--D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L 285 (359)
T 1x19_A 244 GIAVDIYKESYPEA--DAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAM 285 (359)
T ss_dssp EEECCTTTSCCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTC
T ss_pred EEeCccccCCCCCC--CEEEEechhccCCH------------------------------------HHHHHHHHHHHHhc
Confidence 34456665555554 99999999985431 13457888889999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh--hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT--TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIER 295 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv--~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~ 295 (373)
+|||++++.-...++... ..+..+. .-|. ..|. ....+++.+|+++++++.| |++.+
T Consensus 286 ~pgG~l~i~e~~~~~~~~-------~~~~~~~---~~~~~~~~g~----------~~~~~~t~~e~~~ll~~aG-f~~v~ 344 (359)
T 1x19_A 286 RSGGRLLILDMVIDDPEN-------PNFDYLS---HYILGAGMPF----------SVLGFKEQARYKEILESLG-YKDVT 344 (359)
T ss_dssp CTTCEEEEEEECCCCTTS-------CCHHHHH---HHGGGGGSSC----------CCCCCCCGGGHHHHHHHHT-CEEEE
T ss_pred CCCCEEEEEecccCCCCC-------chHHHHH---HHHHhcCCCC----------cccCCCCHHHHHHHHHHCC-CceEE
Confidence 999999877665543311 1122221 1111 1121 1224589999999999999 98877
Q ss_pred EEEe
Q 017363 296 MDKL 299 (373)
Q Consensus 296 le~~ 299 (373)
....
T Consensus 345 ~~~~ 348 (359)
T 1x19_A 345 MVRK 348 (359)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6644
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.36 E-value=4e-07 Score=86.43 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=37.5
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
++++++|+|+|..++||+.-. .-..++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl~--------------------------------~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHLN--------------------------------WGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHHH--------------------------------HHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhhc--------------------------------CCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 468999999999999996300 012356689999999999999999964
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=7.8e-06 Score=79.34 Aligned_cols=150 Identities=14% Similarity=0.152 Sum_probs=91.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+. +++ |..+++.-|+|. .......... +.-+.|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~~--------------p~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~ 238 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ETF--------------PKLKCIVFDRPQ-----VVENLSGSNN--LTYVGG 238 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC--------------TTCEEEEEECHH-----HHTTCCCBTT--EEEEEC
T ss_pred cCceEEEeCCCccHHHHHHH--------HHC--------------CCCeEEEeeCHH-----HHhhcccCCC--cEEEec
Confidence 45799999999998877762 221 234788888841 1121111112 444556
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc--
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP-- 219 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p-- 219 (373)
.|++ -+|+ +|+++++.+||.++.. +...+|+.-++-|+|
T Consensus 239 d~~~-~~p~--~D~v~~~~~lh~~~d~------------------------------------~~~~~l~~~~~~L~p~~ 279 (352)
T 1fp2_A 239 DMFT-SIPN--ADAVLLKYILHNWTDK------------------------------------DCLRILKKCKEAVTNDG 279 (352)
T ss_dssp CTTT-CCCC--CSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHHSGGG
T ss_pred cccC-CCCC--ccEEEeehhhccCCHH------------------------------------HHHHHHHHHHHhCCCCC
Confidence 7776 3563 9999999999964421 233688888899999
Q ss_pred -CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 220 -GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 220 -GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
||++++.-...++.... ..+... ..+.++..-. + +-..+|.+|+++++++.| |++.++..
T Consensus 280 ~gG~l~i~e~~~~~~~~~------~~~~~~-~~~~d~~~~~---------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 280 KRGKVTIIDMVIDKKKDE------NQVTQI-KLLMDVNMAC---------L--NGKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp CCCEEEEEECEECTTTSC------HHHHHH-HHHHHHHGGG---------G--TCCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCcEEEEEEeecCCCCCc------cchhhh-HhhccHHHHh---------c--cCCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 99999887654432210 000001 1112221000 0 013469999999999999 98766553
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-06 Score=76.09 Aligned_cols=109 Identities=13% Similarity=0.128 Sum_probs=67.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gvp 140 (373)
..+|+|+|||+|..++..+... ..+++.-|....-....-+.+. ..+--|..+..
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 80 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVED-----------------------GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDI 80 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHT-----------------------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHHhC-----------------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECch
Confidence 4799999999999876553110 1155566654322111111100 01112333332
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
..--+|++++|+++++.++|+++ + .|...+|+.-++-|+||
T Consensus 81 ---~~~~~~~~~fD~v~~~~~l~~~~--~----------------------------------~~~~~~l~~~~~~Lkpg 121 (209)
T 2p8j_A 81 ---RKLPFKDESMSFVYSYGTIFHMR--K----------------------------------NDVKEAIDEIKRVLKPG 121 (209)
T ss_dssp ---TSCCSCTTCEEEEEECSCGGGSC--H----------------------------------HHHHHHHHHHHHHEEEE
T ss_pred ---hhCCCCCCceeEEEEcChHHhCC--H----------------------------------HHHHHHHHHHHHHcCCC
Confidence 22236789999999999999864 1 14557888888999999
Q ss_pred CeEEEEeccCCCC
Q 017363 221 GLIVFVLFSLPNG 233 (373)
Q Consensus 221 G~lvl~~~g~~~~ 233 (373)
|++++...+..+.
T Consensus 122 G~l~~~~~~~~~~ 134 (209)
T 2p8j_A 122 GLACINFLTTKDE 134 (209)
T ss_dssp EEEEEEEEETTST
T ss_pred cEEEEEEecccch
Confidence 9999999887653
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.26 E-value=1e-05 Score=72.53 Aligned_cols=112 Identities=12% Similarity=0.024 Sum_probs=66.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
.-+|+|+|||+|..++.+.... |..+++-.|+...-....-+.+ .-.+--|+.+.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~----------------------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 99 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN----------------------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD 99 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC----------------------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC
T ss_pred CCeEEEEccCcCHHHHHHHHHC----------------------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 4689999999999998773221 1235666666432222111111 01122344444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
... ....+|++++|+++++...+|.......- + -+...||+.-++-|+|
T Consensus 100 ~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~~-----------~-------------------~~~~~~l~~~~~~Lkp 148 (214)
T 1yzh_A 100 GSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEKR-----------R-------------------LTYKTFLDTFKRILPE 148 (214)
T ss_dssp SSC-GGGTSCTTCCSEEEEESCCCCCSGGGGGG-----------S-------------------TTSHHHHHHHHHHSCT
T ss_pred HHH-HHhhcCCCCCCEEEEECCCCccccchhhh-----------c-------------------cCCHHHHHHHHHHcCC
Confidence 433 23347889999999998888854211000 0 0234688888889999
Q ss_pred CCeEEEEe
Q 017363 220 GGLIVFVL 227 (373)
Q Consensus 220 GG~lvl~~ 227 (373)
||++++..
T Consensus 149 gG~l~~~~ 156 (214)
T 1yzh_A 149 NGEIHFKT 156 (214)
T ss_dssp TCEEEEEE
T ss_pred CcEEEEEe
Confidence 99998865
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.1e-06 Score=78.70 Aligned_cols=107 Identities=7% Similarity=0.008 Sum_probs=71.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC-ccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS-RKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~-~~~f~~gvpg 141 (373)
-.+|+|+|||+|..|..+...+ .. +=.|+--|.-..--..+-+..... +-.++.+..+
T Consensus 78 G~~VldlG~G~G~~~~~la~~V--------G~-------------~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~ 136 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDII--------GP-------------RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR 136 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH--------CT-------------TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT
T ss_pred CCEEEEecCcCCHHHHHHHHHh--------CC-------------CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc
Confidence 4799999999999999884433 11 116777776543333333333222 3346667776
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
....-.++.+++|++|+..+.|| |-..++..-.+-|||||
T Consensus 137 ~p~~~~~~~~~vDvVf~d~~~~~----------------------------------------~~~~~l~~~~r~LKpGG 176 (233)
T 4df3_A 137 FPEKYRHLVEGVDGLYADVAQPE----------------------------------------QAAIVVRNARFFLRDGG 176 (233)
T ss_dssp CGGGGTTTCCCEEEEEECCCCTT----------------------------------------HHHHHHHHHHHHEEEEE
T ss_pred CccccccccceEEEEEEeccCCh----------------------------------------hHHHHHHHHHHhccCCC
Confidence 66666677899999998776666 22256777778899999
Q ss_pred eEEEEeccC
Q 017363 222 LIVFVLFSL 230 (373)
Q Consensus 222 ~lvl~~~g~ 230 (373)
+++++.-.+
T Consensus 177 ~lvI~ik~r 185 (233)
T 4df3_A 177 YMLMAIKAR 185 (233)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999986443
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.15 E-value=5.9e-06 Score=74.04 Aligned_cols=150 Identities=12% Similarity=0.082 Sum_probs=84.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-------CCCccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-------PPSRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-------~~~~~~ 134 (373)
...+|+|+|||+|..+..+.. .+ |..+|+--|+...-...+.+.. ...+-.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~--------~~--------------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~ 84 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVAR--------QN--------------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLL 84 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHH--------HC--------------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEE
T ss_pred CCCEEEEecCCCCHHHHHHHH--------HC--------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceE
Confidence 457999999999999988732 11 2237888888765444332111 011223
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
|..+.. ..--+++++ |.++ ..+.|.......+ .|...+|+.-+
T Consensus 85 ~~~~d~---~~l~~~~~~-d~v~--~~~~~~~~~~~~~-------------------------------~~~~~~l~~~~ 127 (218)
T 3mq2_A 85 YLWATA---ERLPPLSGV-GELH--VLMPWGSLLRGVL-------------------------------GSSPEMLRGMA 127 (218)
T ss_dssp EEECCS---TTCCSCCCE-EEEE--EESCCHHHHHHHH-------------------------------TSSSHHHHHHH
T ss_pred EEecch---hhCCCCCCC-CEEE--EEccchhhhhhhh-------------------------------ccHHHHHHHHH
Confidence 444443 333346666 7776 3333433211011 12236788888
Q ss_pred hhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccccc--CCHHHHHHHHHhcCceE
Q 017363 215 HELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYF--PTAEELKAIIERNGCFR 292 (373)
Q Consensus 215 ~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~--ps~eE~~~~ie~~gsF~ 292 (373)
+-|||||++++.+....-.... .++ + ..|.+. ...++++..+++.| |+
T Consensus 128 ~~LkpgG~l~~~~~~~~~~~~~----------------~~~---~----------~~~~~~~~~~~~~l~~~l~~aG-f~ 177 (218)
T 3mq2_A 128 AVCRPGASFLVALNLHAWRPSV----------------PEV---G----------EHPEPTPDSADEWLAPRYAEAG-WK 177 (218)
T ss_dssp HTEEEEEEEEEEEEGGGBTTBC----------------GGG---T----------TCCCCCHHHHHHHHHHHHHHTT-EE
T ss_pred HHcCCCcEEEEEeccccccccc----------------ccc---c----------cCCccchHHHHHHHHHHHHHcC-CC
Confidence 9999999999976532211110 000 0 111111 13456888999999 99
Q ss_pred EeEEEEec
Q 017363 293 IERMDKLP 300 (373)
Q Consensus 293 I~~le~~~ 300 (373)
|..++.+.
T Consensus 178 i~~~~~~~ 185 (218)
T 3mq2_A 178 LADCRYLE 185 (218)
T ss_dssp EEEEEEEC
T ss_pred ceeeeccc
Confidence 99988774
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.6e-05 Score=69.19 Aligned_cols=101 Identities=11% Similarity=0.005 Sum_probs=62.1
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCccc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGSF 143 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgSF 143 (373)
-+|+|+|||+|..++.+... - +|+--|+...--.. ..+--|..+..
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~-----------------------~--~v~gvD~s~~~~~~------~~~~~~~~~d~--- 70 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKR-----------------------N--TVVSTDLNIRALES------HRGGNLVRADL--- 70 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTT-----------------------S--EEEEEESCHHHHHT------CSSSCEEECST---
T ss_pred CeEEEeccCccHHHHHHHhc-----------------------C--cEEEEECCHHHHhc------ccCCeEEECCh---
Confidence 49999999999998887211 1 56666664322111 11223444433
Q ss_pred ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeE
Q 017363 144 HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLI 223 (373)
Q Consensus 144 y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 223 (373)
.+ .+|++++|+++|+..+||.+..+. + ..| .|...+++.-.+.| |||++
T Consensus 71 ~~-~~~~~~fD~i~~n~~~~~~~~~~~-~--------~~~--------------------~~~~~~~~~~~~~l-pgG~l 119 (170)
T 3q87_B 71 LC-SINQESVDVVVFNPPYVPDTDDPI-I--------GGG--------------------YLGREVIDRFVDAV-TVGML 119 (170)
T ss_dssp TT-TBCGGGCSEEEECCCCBTTCCCTT-T--------BCC--------------------GGGCHHHHHHHHHC-CSSEE
T ss_pred hh-hcccCCCCEEEECCCCccCCcccc-c--------cCC--------------------cchHHHHHHHHhhC-CCCEE
Confidence 33 456699999999999999876542 1 000 12224555555666 99999
Q ss_pred EEEecc
Q 017363 224 VFVLFS 229 (373)
Q Consensus 224 vl~~~g 229 (373)
++...+
T Consensus 120 ~~~~~~ 125 (170)
T 3q87_B 120 YLLVIE 125 (170)
T ss_dssp EEEEEG
T ss_pred EEEEec
Confidence 987743
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-05 Score=70.09 Aligned_cols=104 Identities=14% Similarity=0.175 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
...+|+|+|||+|..++.+... ..+|+..|+...-....-+.+. ..+--|..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 96 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER------------------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD 96 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECC
Confidence 3569999999999998877421 0145566654322111111110 0111233332
Q ss_pred CcccccCCCCCCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 140 PGSFHGRLFPKSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. .. +-+++++|++++.. ++|+++ + .|...+|+.-++-|+
T Consensus 97 ~---~~-~~~~~~fD~v~~~~~~~~~~~--~----------------------------------~~~~~~l~~~~~~L~ 136 (252)
T 1wzn_A 97 V---LE-IAFKNEFDAVTMFFSTIMYFD--E----------------------------------EDLRKLFSKVAEALK 136 (252)
T ss_dssp G---GG-CCCCSCEEEEEECSSGGGGSC--H----------------------------------HHHHHHHHHHHHHEE
T ss_pred h---hh-cccCCCccEEEEcCCchhcCC--H----------------------------------HHHHHHHHHHHHHcC
Confidence 2 22 22347899999874 455542 1 145578888889999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++.+..
T Consensus 137 pgG~li~~~~~ 147 (252)
T 1wzn_A 137 PGGVFITDFPC 147 (252)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEeccc
Confidence 99999998764
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-05 Score=69.90 Aligned_cols=98 Identities=11% Similarity=0.031 Sum_probs=56.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.. . +.-+++..|+...--...=+.+ ...+--|..+.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~--------~---------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 117 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK--------L---------------GAKSVLATDISDESMTAAEENAALNGIYDIALQKTS 117 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH--------T---------------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred CCEEEEECCCCCHHHHHHHH--------C---------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecc
Confidence 46999999999988876521 1 0115666666432111111111 11111233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. .. ++++++|+++++..+||+. .+|+.-.+-|+|
T Consensus 118 ~---~~--~~~~~fD~i~~~~~~~~~~-----------------------------------------~~l~~~~~~L~~ 151 (205)
T 3grz_A 118 L---LA--DVDGKFDLIVANILAEILL-----------------------------------------DLIPQLDSHLNE 151 (205)
T ss_dssp T---TT--TCCSCEEEEEEESCHHHHH-----------------------------------------HHGGGSGGGEEE
T ss_pred c---cc--cCCCCceEEEECCcHHHHH-----------------------------------------HHHHHHHHhcCC
Confidence 2 22 3468999999998777642 344555578999
Q ss_pred CCeEEEEecc
Q 017363 220 GGLIVFVLFS 229 (373)
Q Consensus 220 GG~lvl~~~g 229 (373)
||++++....
T Consensus 152 gG~l~~~~~~ 161 (205)
T 3grz_A 152 DGQVIFSGID 161 (205)
T ss_dssp EEEEEEEEEE
T ss_pred CCEEEEEecC
Confidence 9999996443
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.6e-05 Score=76.12 Aligned_cols=148 Identities=21% Similarity=0.155 Sum_probs=85.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..|..+++. + .-+|+--|+-.+.-..-.+.-+.- ..+-..--.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~------------g-----------a~~V~aVDvs~~mL~~a~r~~~rv-~~~~~~ni~ 140 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN------------G-----------AKLVYAVDVGTNQLVWKLRQDDRV-RSMEQYNFR 140 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------T-----------CSEEEEECSSSSCSCHHHHTCTTE-EEECSCCGG
T ss_pred cccEEEecCCCccHHHHHHHhC------------C-----------CCEEEEEECCHHHHHHHHHhCccc-ceecccCce
Confidence 4579999999999999876321 0 016888888765533312221110 000000000
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..-..-+|..++|++++..++|||.. +|..-++-|+|||
T Consensus 141 ~l~~~~l~~~~fD~v~~d~sf~sl~~-----------------------------------------vL~e~~rvLkpGG 179 (291)
T 3hp7_A 141 YAEPVDFTEGLPSFASIDVSFISLNL-----------------------------------------ILPALAKILVDGG 179 (291)
T ss_dssp GCCGGGCTTCCCSEEEECCSSSCGGG-----------------------------------------THHHHHHHSCTTC
T ss_pred ecchhhCCCCCCCEEEEEeeHhhHHH-----------------------------------------HHHHHHHHcCcCC
Confidence 00011256678999999999998743 3444557899999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
+|++..--.-+... +-+ ..|.+.... .+..+.+++.+.++..| |.+..+....
T Consensus 180 ~lv~lvkPqfe~~~------------------~~~~~~G~vrd~~-------~~~~~~~~v~~~~~~~G-f~v~~~~~sp 233 (291)
T 3hp7_A 180 QVVALVKPQFEAGR------------------EQIGKNGIVRESS-------IHEKVLETVTAFAVDYG-FSVKGLDFSP 233 (291)
T ss_dssp EEEEEECGGGTSCG------------------GGCC-CCCCCCHH-------HHHHHHHHHHHHHHHTT-EEEEEEEECS
T ss_pred EEEEEECcccccCh------------------hhcCCCCccCCHH-------HHHHHHHHHHHHHHHCC-CEEEEEEECC
Confidence 99997411000000 111 235543222 14568899999999999 9988877553
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=2.4e-05 Score=76.25 Aligned_cols=100 Identities=18% Similarity=0.060 Sum_probs=65.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CC-Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PP-SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~-~~~~f~~ 137 (373)
..+|+|+|||+|..++.+.+. +.-+|+.-|+. . .-...+.. .- .+--|+.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-----------------------g~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~ 121 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-----------------------GARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIK 121 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-----------------------TCSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEeccchHHHHHHHHC-----------------------CCCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEE
Confidence 468999999999988877321 01267777876 3 22222221 11 1123444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .+--+|.+++|+++|....+++...+ ++..+|+.+.+-|
T Consensus 122 ~d~---~~~~~~~~~fD~Iis~~~~~~l~~~~-----------------------------------~~~~~l~~~~r~L 163 (349)
T 3q7e_A 122 GKV---EEVELPVEKVDIIISEWMGYCLFYES-----------------------------------MLNTVLHARDKWL 163 (349)
T ss_dssp SCT---TTCCCSSSCEEEEEECCCBBTBTBTC-----------------------------------CHHHHHHHHHHHE
T ss_pred CcH---HHccCCCCceEEEEEccccccccCch-----------------------------------hHHHHHHHHHHhC
Confidence 443 33347889999999987666654322 5668999999999
Q ss_pred ccCCeEEE
Q 017363 218 VPGGLIVF 225 (373)
Q Consensus 218 ~pGG~lvl 225 (373)
+|||+|+.
T Consensus 164 kpgG~li~ 171 (349)
T 3q7e_A 164 APDGLIFP 171 (349)
T ss_dssp EEEEEEES
T ss_pred CCCCEEcc
Confidence 99999973
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=68.63 Aligned_cols=113 Identities=18% Similarity=0.089 Sum_probs=68.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..+..+.+.. . +..+++..|+.. - - .+ .+--|..+....
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~--------~-------------~~~~v~~~D~~~-~-~----~~--~~~~~~~~d~~~ 73 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQI--------G-------------GKGRIIACDLLP-M-D----PI--VGVDFLQGDFRD 73 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHH--------C-------------TTCEEEEEESSC-C-C----CC--TTEEEEESCTTS
T ss_pred CCeEEEeCCCCCHHHHHHHHHh--------C-------------CCCeEEEEECcc-c-c----cc--CcEEEEEccccc
Confidence 4699999999999888774332 1 112666667643 1 1 11 122233333211
Q ss_pred c-----ccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 143 F-----HGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 143 F-----y~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
. ..+.+|++++|+++++..+||......... ........+|+.-.+-|
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~~~L 126 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIP---------------------------RAMYLVELALEMCRDVL 126 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHH---------------------------HHHHHHHHHHHHHHHHE
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccchH---------------------------HHHHHHHHHHHHHHHHc
Confidence 1 011167889999999999999764321100 00112357888888899
Q ss_pred ccCCeEEEEeccCC
Q 017363 218 VPGGLIVFVLFSLP 231 (373)
Q Consensus 218 ~pGG~lvl~~~g~~ 231 (373)
+|||++++......
T Consensus 127 ~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 127 APGGSFVVKVFQGE 140 (180)
T ss_dssp EEEEEEEEEEESST
T ss_pred CCCcEEEEEEecCC
Confidence 99999999877543
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.3e-05 Score=66.46 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=19.3
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+...+|+.-.+-|+|||+|++....
T Consensus 113 ~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 113 TTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3446777778899999999998764
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.3e-05 Score=74.06 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=43.2
Q ss_pred HHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhc
Q 017363 209 FLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERN 288 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~ 288 (373)
+|..-++-|+|||+|++.+ . + .|+ ..+..+-..|.+..... +..+.+++.+.+++.
T Consensus 119 ~l~~i~rvLkpgG~lv~~~--~----p--------~~e---~~~~~~~~~G~~~d~~~-------~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI--K----P--------QFE---AGREQVGKNGIIRDPKV-------HQMTIEKVLKTATQL 174 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE--C----H--------HHH---SCHHHHC-CCCCCCHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEEE--C----c--------ccc---cCHHHhCcCCeecCcch-------hHHHHHHHHHHHHHC
Confidence 5666778999999999965 1 1 111 11223334465532221 334899999999999
Q ss_pred CceEEeEEEEec
Q 017363 289 GCFRIERMDKLP 300 (373)
Q Consensus 289 gsF~I~~le~~~ 300 (373)
| |++..++...
T Consensus 175 G-f~v~~~~~~p 185 (232)
T 3opn_A 175 G-FSVKGLTFSP 185 (232)
T ss_dssp T-EEEEEEEECS
T ss_pred C-CEEEEEEEcc
Confidence 9 9998887553
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.1e-05 Score=69.22 Aligned_cols=55 Identities=9% Similarity=0.077 Sum_probs=36.9
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
+|++++|+++|..++||..... .+ .+ ...+....+|+.-.+-|+|||+|++.+
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~~~---~d----------------------~~--~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGNKI---DD----------------------HL--NSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSCHH---HH----------------------HH--HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCCcc---cC----------------------HH--HHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 5778999999999999953110 00 00 001123457777788999999999977
Q ss_pred cc
Q 017363 228 FS 229 (373)
Q Consensus 228 ~g 229 (373)
+.
T Consensus 155 ~~ 156 (201)
T 2plw_A 155 YL 156 (201)
T ss_dssp EC
T ss_pred eC
Confidence 65
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=74.22 Aligned_cols=160 Identities=13% Similarity=0.190 Sum_probs=89.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+... ..+++..|+...--...-+... . .|..+..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~l~~a~~~~~--~-~~~~~d~- 105 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER------------------------GFEVVLVDPSKEMLEVAREKGV--K-NVVEAKA- 105 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT------------------------TCEEEEEESCHHHHHHHHHHTC--S-CEEECCT-
T ss_pred CCCeEEEeCCCcCHHHHHHHHc------------------------CCeEEEEeCCHHHHHHHHhhcC--C-CEEECcH-
Confidence 3469999999999998876221 1156777765332222211222 1 1444433
Q ss_pred ccccCCCCCCcceEEEccC-cccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRLFPKSSLHFANSSS-SLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~-alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
..--+|++++|+++++. .+||... ...+|+.-++-|+||
T Consensus 106 --~~~~~~~~~fD~v~~~~~~~~~~~~--------------------------------------~~~~l~~~~~~Lkpg 145 (260)
T 2avn_A 106 --EDLPFPSGAFEAVLALGDVLSYVEN--------------------------------------KDKAFSEIRRVLVPD 145 (260)
T ss_dssp --TSCCSCTTCEEEEEECSSHHHHCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred --HHCCCCCCCEEEEEEcchhhhcccc--------------------------------------HHHHHHHHHHHcCCC
Confidence 33336789999999976 5667442 336788888999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
|++++..++....... ......|..+ ..+...|...... ..+.++.++.+++|++++ .| |++.++..+.
T Consensus 146 G~l~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~ 214 (260)
T 2avn_A 146 GLLIATVDNFYTFLQQ--MIEKDAWDQI----TRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIG 214 (260)
T ss_dssp EEEEEEEEBHHHHHHH--HHHTTCHHHH----HHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEEC
T ss_pred eEEEEEeCChHHHHHH--hhcchhHHHH----HHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCC
Confidence 9999998764310000 0000012111 2223334322000 001122346788999887 78 9988877654
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=97.97 E-value=2.3e-05 Score=67.71 Aligned_cols=104 Identities=9% Similarity=0.018 Sum_probs=63.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCc--ccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSR--KYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~--~~f~ 136 (373)
...+|+|+|||+|..++.+... ..+++..|+-..-....-+.+ .... --+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~------------------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 107 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE------------------------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG------------------------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 3569999999999988876321 014555554322111111111 0011 1222
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+. +.. .++++++|+++++..+||-. .++..+|+.-.+-
T Consensus 108 ~~d---~~~-~~~~~~~D~v~~~~~~~~~~-------------------------------------~~~~~~l~~~~~~ 146 (194)
T 1dus_A 108 HSD---LYE-NVKDRKYNKIITNPPIRAGK-------------------------------------EVLHRIIEEGKEL 146 (194)
T ss_dssp ECS---TTT-TCTTSCEEEEEECCCSTTCH-------------------------------------HHHHHHHHHHHHH
T ss_pred ECc---hhc-ccccCCceEEEECCCcccch-------------------------------------hHHHHHHHHHHHH
Confidence 222 222 34578899999999888711 1445788888899
Q ss_pred hccCCeEEEEeccC
Q 017363 217 LVPGGLIVFVLFSL 230 (373)
Q Consensus 217 L~pGG~lvl~~~g~ 230 (373)
|+|||++++.....
T Consensus 147 L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 147 LKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEEEEEST
T ss_pred cCCCCEEEEEECCC
Confidence 99999999998764
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=68.76 Aligned_cols=120 Identities=14% Similarity=0.155 Sum_probs=71.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvpg 141 (373)
..+|+|+|||+|..++.+...- +. +++..|+...-....-+.+.. .+--+..+..
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~----------------------~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~- 98 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGG----------------------FP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV- 98 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTT----------------------CC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT-
T ss_pred CCeEEEECCCCcHHHHHHHHcC----------------------CC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch-
Confidence 4689999999999998773210 11 456666543222222222221 1122333333
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..--+|++++|+|+++.++|.+..... ..|.. .+ ....|...+|+.-.+-|+|||
T Consensus 99 --~~~~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~--------~~--------~~~~~~~~~l~~~~~~LkpgG 153 (215)
T 2pxx_A 99 --RKLDFPSASFDVVLEKGTLDALLAGER-------DPWTV--------SS--------EGVHTVDQVLSEVSRVLVPGG 153 (215)
T ss_dssp --TSCCSCSSCEEEEEEESHHHHHTTTCS-------CTTSC--------CH--------HHHHHHHHHHHHHHHHEEEEE
T ss_pred --hcCCCCCCcccEEEECcchhhhccccc-------ccccc--------cc--------chhHHHHHHHHHHHHhCcCCC
Confidence 222367889999999999877542110 11111 00 112366788999899999999
Q ss_pred eEEEEeccCC
Q 017363 222 LIVFVLFSLP 231 (373)
Q Consensus 222 ~lvl~~~g~~ 231 (373)
++++..++.+
T Consensus 154 ~li~~~~~~~ 163 (215)
T 2pxx_A 154 RFISMTSAAP 163 (215)
T ss_dssp EEEEEESCCH
T ss_pred EEEEEeCCCc
Confidence 9999987754
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=4.5e-05 Score=75.57 Aligned_cols=107 Identities=15% Similarity=0.155 Sum_probs=66.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
...+|+|+|||+|..++.+... ..+|+..|.-..-....=+++. ....-|..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~------------------------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~-- 286 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM------------------------GAEVVGVEDDLASVLSLQKGLEANALKAQALH-- 286 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT------------------------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEE--
T ss_pred CCCEEEEEeeeCCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE--
Confidence 3569999999999999987421 0155666653221111111111 00112222
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+.+..-+.+++++|+|+|+..+||..... ..+...||+.-.+-|+|
T Consensus 287 -~D~~~~~~~~~~fD~Ii~npp~~~~~~~~---------------------------------~~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 287 -SDVDEALTEEARFDIIVTNPPFHVGGAVI---------------------------------LDVAQAFVNVAAARLRP 332 (381)
T ss_dssp -CSTTTTSCTTCCEEEEEECCCCCTTCSSC---------------------------------CHHHHHHHHHHHHHEEE
T ss_pred -cchhhccccCCCeEEEEECCchhhccccc---------------------------------HHHHHHHHHHHHHhcCc
Confidence 23344445568999999999999854332 12556789988999999
Q ss_pred CCeEEEEec
Q 017363 220 GGLIVFVLF 228 (373)
Q Consensus 220 GG~lvl~~~ 228 (373)
||+++++..
T Consensus 333 GG~l~iv~n 341 (381)
T 3dmg_A 333 GGVFFLVSN 341 (381)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEc
Confidence 999999854
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00012 Score=64.78 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=58.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
...+|+|+|||+|..++.+.... |..+|+..|....-....=+.+ .-.+--+..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~----------------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLM----------------------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHC----------------------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHC----------------------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 35799999999999988774221 1125666665432111111111 0011112222
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.+.+.+.+..++|++++..+++ +...+|+.-.+-|+
T Consensus 98 ---d~~~~~~~~~~~D~i~~~~~~~-----------------------------------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 98 ---FAPEGLDDLPDPDRVFIGGSGG-----------------------------------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp ---CTTTTCTTSCCCSEEEESCCTT-----------------------------------------CHHHHHHHHHHHCC
T ss_pred ---ChhhhhhcCCCCCEEEECCCCc-----------------------------------------CHHHHHHHHHHhcC
Confidence 2233333346789998876654 22357777788999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++....
T Consensus 134 pgG~l~~~~~~ 144 (204)
T 3e05_A 134 SEGVIVLNAVT 144 (204)
T ss_dssp TTCEEEEEECB
T ss_pred CCeEEEEEecc
Confidence 99999997543
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=7.5e-06 Score=74.64 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=70.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
..-+|+|+|||+|..++.+... .|...|+--|...+-....-+.+ ...+--|+.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~----------------------~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~ 91 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKD----------------------RPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH 91 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHH----------------------CTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECS
T ss_pred CCCeEEEEeeeChHHHHHHHHH----------------------CCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 3568999999999998877321 12235666676543322222221 1112234555
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
....+....+|++|+|.+++++...|-..... +.++. -..||+.-++-|+
T Consensus 92 Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~rr~~-------------------~~~~l~~~~r~Lk 141 (218)
T 3dxy_A 92 DAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN-----------KRRIV-------------------QVPFAELVKSKLQ 141 (218)
T ss_dssp CHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG-----------GGSSC-------------------SHHHHHHHHHHEE
T ss_pred CHHHHHHHHcCCCChheEEEeCCCCccchhhh-----------hhhhh-------------------hHHHHHHHHHHcC
Confidence 44333344589999999999999999543210 00110 0258888889999
Q ss_pred cCCeEEEEe
Q 017363 219 PGGLIVFVL 227 (373)
Q Consensus 219 pGG~lvl~~ 227 (373)
|||+|++.+
T Consensus 142 pGG~l~i~t 150 (218)
T 3dxy_A 142 LGGVFHMAT 150 (218)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999876
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.91 E-value=5e-05 Score=74.80 Aligned_cols=102 Identities=15% Similarity=0.072 Sum_probs=66.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-C---C-Ccccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-P---P-SRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~---~-~~~~f~ 136 (373)
+..+|+|+|||+|..++.+.+. + . -+|+.-|.. +- -...+.. . - .+--|+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~------------g---------~--~~V~gvD~s-~~-~~~a~~~~~~~~~~~~v~~~ 117 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA------------G---------A--RKVYAVEAT-KM-ADHARALVKANNLDHIVEVI 117 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT------------T---------C--SEEEEEESS-TT-HHHHHHHHHHTTCTTTEEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc------------C---------C--CEEEEEccH-HH-HHHHHHHHHHcCCCCeEEEE
Confidence 4579999999999988876321 0 0 168888876 32 2333321 1 0 112344
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+.. .+-.+| +++|+++|....|++... .++..+|+.+.+-
T Consensus 118 ~~d~---~~~~~~-~~~D~Iv~~~~~~~l~~e-----------------------------------~~~~~~l~~~~~~ 158 (376)
T 3r0q_C 118 EGSV---EDISLP-EKVDVIISEWMGYFLLRE-----------------------------------SMFDSVISARDRW 158 (376)
T ss_dssp ESCG---GGCCCS-SCEEEEEECCCBTTBTTT-----------------------------------CTHHHHHHHHHHH
T ss_pred ECch---hhcCcC-CcceEEEEcChhhcccch-----------------------------------HHHHHHHHHHHhh
Confidence 4443 232344 899999998777776532 1566899999999
Q ss_pred hccCCeEEEEe
Q 017363 217 LVPGGLIVFVL 227 (373)
Q Consensus 217 L~pGG~lvl~~ 227 (373)
|+|||+|++.-
T Consensus 159 LkpgG~li~~~ 169 (376)
T 3r0q_C 159 LKPTGVMYPSH 169 (376)
T ss_dssp EEEEEEEESSE
T ss_pred CCCCeEEEEec
Confidence 99999997654
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.1e-05 Score=69.08 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=63.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
.-+|+|+|||+|..++.+.... |..+++--|....--...-+.+ .-.+--|+.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~----------------------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d 96 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQN----------------------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID 96 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHC----------------------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC
T ss_pred CceEEEEecCCCHHHHHHHHHC----------------------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 4589999999999998773221 1224555555432211111111 00111233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
... ....+|++++|.++++.+..|....-. +.++ ....||+.-++-|+|
T Consensus 97 ~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl-------------------~~~~~l~~~~~~Lkp 145 (213)
T 2fca_A 97 ADT-LTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL-------------------TYSHFLKKYEEVMGK 145 (213)
T ss_dssp GGG-HHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST-------------------TSHHHHHHHHHHHTT
T ss_pred HHH-HHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc-------------------CcHHHHHHHHHHcCC
Confidence 222 123478899999999888888542110 0000 123678888899999
Q ss_pred CCeEEEEe
Q 017363 220 GGLIVFVL 227 (373)
Q Consensus 220 GG~lvl~~ 227 (373)
||+|++.+
T Consensus 146 gG~l~~~t 153 (213)
T 2fca_A 146 GGSIHFKT 153 (213)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999876
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.9e-05 Score=74.45 Aligned_cols=100 Identities=11% Similarity=-0.018 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..|+.+... . .+|...|+..+-....=+.+... + +.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--------g----------------~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~ 94 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--------G----------------ASVTVFDFSQRMCDDLAEALADR---C---VTI 94 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--------T----------------CEEEEEESCHHHHHHHHHHTSSS---C---CEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc--------C----------------CEEEEEECCHHHHHHHHHHHHhc---c---cee
Confidence 3579999999999999887421 0 15666665433322222222211 1 111
Q ss_pred ccccCC-----CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 142 SFHGRL-----FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 142 SFy~rl-----fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+..-- .+++++|+++|+.++||+.. .|+..+|+.-++-
T Consensus 95 ~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~------------------------------------~~~~~~l~~l~~l 138 (261)
T 3iv6_A 95 DLLDITAEIPKELAGHFDFVLNDRLINRFTT------------------------------------EEARRACLGMLSL 138 (261)
T ss_dssp EECCTTSCCCGGGTTCCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHH
T ss_pred eeeecccccccccCCCccEEEEhhhhHhCCH------------------------------------HHHHHHHHHHHHh
Confidence 111111 12578999999999998641 1344567777777
Q ss_pred hccCCeEEEEec
Q 017363 217 LVPGGLIVFVLF 228 (373)
Q Consensus 217 L~pGG~lvl~~~ 228 (373)
| |||++++++.
T Consensus 139 L-PGG~l~lS~~ 149 (261)
T 3iv6_A 139 V-GSGTVRASVK 149 (261)
T ss_dssp H-TTSEEEEEEE
T ss_pred C-cCcEEEEEec
Confidence 8 9999999875
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.9e-05 Score=67.45 Aligned_cols=78 Identities=8% Similarity=-0.057 Sum_probs=44.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
...+|+|+|||+|..+..+... . .+|+.-|....-....=+.+ .-.+--|..+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~--------~----------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL--------V----------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--------S----------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--------C----------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 4579999999999999877432 0 04555555322111111111 1111123332
Q ss_pred cCcccccCCCCCCcceEEEccCcccccc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
...+.+.+.+++|+++++.++||+.
T Consensus 133 ---d~~~~~~~~~~~D~i~~~~~~~~~~ 157 (210)
T 3lbf_A 133 ---DGWQGWQARAPFDAIIVTAAPPEIP 157 (210)
T ss_dssp ---CGGGCCGGGCCEEEEEESSBCSSCC
T ss_pred ---CcccCCccCCCccEEEEccchhhhh
Confidence 2233444568999999999999854
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=2.7e-05 Score=70.86 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=61.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
...+|+|+|||+|..+..+.. . .+. +|+.-|+..+-....=+... ..+--|..+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~--------~--------------~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 116 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQE--------A--------------PID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL 116 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHT--------S--------------CEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC
T ss_pred CCCeEEEEeccCCHHHHHHHh--------c--------------CCC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC
Confidence 357999999999998877621 0 111 56666665322111111111 1112233333
Q ss_pred CcccccC--CCCCCcceEEEc-cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGR--LFPKSSLHFANS-SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~r--lfP~~Svd~~~S-s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
. .+. -+|++++|+|++ .+++++ .... ..++..+|+.-++-
T Consensus 117 ~---~~~~~~~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~ 159 (236)
T 1zx0_A 117 W---EDVAPTLPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRL 159 (236)
T ss_dssp H---HHHGGGSCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHH
T ss_pred H---HHhhcccCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHh
Confidence 2 222 368899999999 666522 2111 11445678888899
Q ss_pred hccCCeEEEEec
Q 017363 217 LVPGGLIVFVLF 228 (373)
Q Consensus 217 L~pGG~lvl~~~ 228 (373)
|||||+|++...
T Consensus 160 LkpgG~l~~~~~ 171 (236)
T 1zx0_A 160 LKPGGVLTYCNL 171 (236)
T ss_dssp EEEEEEEEECCH
T ss_pred cCCCeEEEEEec
Confidence 999999987644
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=62.85 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=62.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
...+|+|+|||+|..++.+... .+..+|+..|+...-....=+.+ .-..++++.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~----------------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 82 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRS----------------------TPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQ 82 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTT----------------------SSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHH----------------------CCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEec
Confidence 4579999999999988876221 12347788887543222221111 1111234443
Q ss_pred cCcccccCCCCC--CcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 139 VPGSFHGRLFPK--SSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 139 vpgSFy~rlfP~--~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.. .+ .+|. +++|+++++.++|| + .+|+.-.+-
T Consensus 83 d~---~~-~~~~~~~~~D~i~~~~~~~~----~--------------------------------------~~l~~~~~~ 116 (178)
T 3hm2_A 83 GA---PR-AFDDVPDNPDVIFIGGGLTA----P--------------------------------------GVFAAAWKR 116 (178)
T ss_dssp CT---TG-GGGGCCSCCSEEEECC-TTC----T--------------------------------------THHHHHHHT
T ss_pred ch---Hh-hhhccCCCCCEEEECCcccH----H--------------------------------------HHHHHHHHh
Confidence 32 22 3444 89999999999988 1 256666789
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||++++....
T Consensus 117 L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 117 LPVGGRLVANAVT 129 (178)
T ss_dssp CCTTCEEEEEECS
T ss_pred cCCCCEEEEEeec
Confidence 9999999988764
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.84 E-value=9.5e-05 Score=64.77 Aligned_cols=109 Identities=15% Similarity=0.076 Sum_probs=62.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+++. . .-+|+..|+-..-....=+.+ .-.+--|..+.
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~---------~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 101 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSR---------G--------------AASVLFVESDQRSAAVIARNIEALGLSGATLRRGA 101 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---------T--------------CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHC---------C--------------CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 468999999999999865320 0 014555555422211111111 00112233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh--hh
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH--EL 217 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~--EL 217 (373)
...+-. -++++++|+++++..+||.. .++..+|+.-.+ -|
T Consensus 102 ~~~~~~-~~~~~~fD~i~~~~p~~~~~-------------------------------------~~~~~~l~~~~~~~~L 143 (189)
T 3p9n_A 102 VAAVVA-AGTTSPVDLVLADPPYNVDS-------------------------------------ADVDAILAALGTNGWT 143 (189)
T ss_dssp HHHHHH-HCCSSCCSEEEECCCTTSCH-------------------------------------HHHHHHHHHHHHSSSC
T ss_pred HHHHHh-hccCCCccEEEECCCCCcch-------------------------------------hhHHHHHHHHHhcCcc
Confidence 222211 13578999999998888742 134456666656 89
Q ss_pred ccCCeEEEEeccCCC
Q 017363 218 VPGGLIVFVLFSLPN 232 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~ 232 (373)
+|||++++....+..
T Consensus 144 ~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 144 REGTVAVVERATTCA 158 (189)
T ss_dssp CTTCEEEEEEETTSC
T ss_pred CCCeEEEEEecCCCC
Confidence 999999998876554
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0001 Score=71.50 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=60.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C---CC-Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M---PP-SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l---~~-~~~~f~~ 137 (373)
.-+|+|+|||+|..++.+.. . + ..+|+.-|.. . .-...+. + .- .+--+..
T Consensus 65 ~~~VLDiGcGtG~ls~~la~--------~----g-----------~~~v~gvD~s-~-~~~~a~~~~~~~~~~~~i~~~~ 119 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAK--------A----G-----------AKKVLGVDQS-E-ILYQAMDIIRLNKLEDTITLIK 119 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHH--------T----T-----------CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEeeccCcHHHHHHHH--------c----C-----------CCEEEEEChH-H-HHHHHHHHHHHcCCCCcEEEEE
Confidence 46999999999998876621 1 0 1167777775 2 2222222 1 11 1223444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .+--+|++++|+++|....+-+.. ..++..+|+.+.+-|
T Consensus 120 ~d~---~~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~L 161 (340)
T 2fyt_A 120 GKI---EEVHLPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKYL 161 (340)
T ss_dssp SCT---TTSCCSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHHE
T ss_pred eeH---HHhcCCCCcEEEEEEcCchhhccC-----------------------------------HHHHHHHHHHHHhhc
Confidence 433 333467789999999763221111 115557899999999
Q ss_pred ccCCeEE
Q 017363 218 VPGGLIV 224 (373)
Q Consensus 218 ~pGG~lv 224 (373)
+|||+++
T Consensus 162 kpgG~li 168 (340)
T 2fyt_A 162 AKGGSVY 168 (340)
T ss_dssp EEEEEEE
T ss_pred CCCcEEE
Confidence 9999998
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=9.9e-05 Score=67.44 Aligned_cols=70 Identities=23% Similarity=0.304 Sum_probs=40.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHH
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAI 284 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ 284 (373)
+...+|+.-++-|||||+|++.....+.... + .+...+. . ...|.|++. +|+.+.
T Consensus 117 ~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~------------~-----~~~~~~~------~-~~~~~~~~~-~el~~~ 171 (225)
T 3p2e_A 117 PNRDILSNVADLAKKEAHFEFVTTYSDSYEE------------A-----EIKKRGL------P-LLSKAYFLS-EQYKAE 171 (225)
T ss_dssp TCHHHHHHHHTTEEEEEEEEEEECCCC--------------------------------------CCHHHHHS-HHHHHH
T ss_pred chHHHHHHHHHhcCCCcEEEEEEeccccchh------------c-----hhhhcCC------C-CCChhhcch-HHHHHH
Confidence 3346788888999999999995432222110 0 0000011 0 012233332 479999
Q ss_pred HHhcCceEEeEEEEec
Q 017363 285 IERNGCFRIERMDKLP 300 (373)
Q Consensus 285 ie~~gsF~I~~le~~~ 300 (373)
+++.| |+|..++.+.
T Consensus 172 l~~aG-f~v~~~~~~~ 186 (225)
T 3p2e_A 172 LSNSG-FRIDDVKELD 186 (225)
T ss_dssp HHHHT-CEEEEEEEEC
T ss_pred HHHcC-CCeeeeeecC
Confidence 99999 9999999885
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=7.9e-05 Score=71.89 Aligned_cols=99 Identities=21% Similarity=0.201 Sum_probs=60.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-C---C-Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-P---P-SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~---~-~~~~f~~ 137 (373)
..+|+|+|||+|..++.+.+ . + .-+|+.-|.. . .-...+.. . - .+--+..
T Consensus 39 ~~~VLDiGcGtG~ls~~la~--------~----g-----------~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAK--------H----G-----------AKHVIGVDMS-S-IIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHH--------T----C-----------CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEecCccHHHHHHHHH--------C----C-----------CCEEEEEChH-H-HHHHHHHHHHHcCCCCCEEEEE
Confidence 46999999999998876621 1 0 1167777875 2 22222221 1 0 1122343
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. .+--+|.+++|+++|....+.+... .++..+|..+.+-|
T Consensus 94 ~d~---~~~~~~~~~~D~Ivs~~~~~~l~~~-----------------------------------~~~~~~l~~~~~~L 135 (328)
T 1g6q_1 94 GKL---EDVHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYL 135 (328)
T ss_dssp SCT---TTSCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHE
T ss_pred Cch---hhccCCCCcccEEEEeCchhhcccH-----------------------------------HHHHHHHHHHHhhc
Confidence 332 2333677899999998554433211 14557899999999
Q ss_pred ccCCeEE
Q 017363 218 VPGGLIV 224 (373)
Q Consensus 218 ~pGG~lv 224 (373)
+|||+++
T Consensus 136 kpgG~li 142 (328)
T 1g6q_1 136 VEGGLIF 142 (328)
T ss_dssp EEEEEEE
T ss_pred CCCeEEE
Confidence 9999997
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.2e-05 Score=74.13 Aligned_cols=132 Identities=17% Similarity=0.126 Sum_probs=73.0
Q ss_pred chhHHhhHHHHHHHHHH-HHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCc
Q 017363 22 YSYAKNSSFQRMIIDAA-KEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNH 100 (373)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~-~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~ 100 (373)
.||+..+-.+..+-... ..--.+||..... .+ +--+|+|+|||+|..|+...+. ++
T Consensus 50 ~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~--~~------~~k~VLDvG~GtGiLs~~Aa~a------------GA--- 106 (376)
T 4hc4_A 50 ECYSDVSVHEEMIADRVRTDAYRLGILRNWA--AL------RGKTVLDVGAGTGILSIFCAQA------------GA--- 106 (376)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHTTHH--HH------TTCEEEEETCTTSHHHHHHHHT------------TC---
T ss_pred hhccCcHHHHHHhCCHHHHHHHHHHHHhCHH--hc------CCCEEEEeCCCccHHHHHHHHh------------CC---
Confidence 37888877666555433 2333455543211 11 2247999999999887765211 11
Q ss_pred CCCCCCceeEEEecCCCCCchhhHhhcCC-----CCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcC
Q 017363 101 QNSSSALEFQVFFNDHYGNDFNTLFQTMP-----PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDS 175 (373)
Q Consensus 101 ~~~~~~~~~~v~~nDLp~NDFn~lf~~l~-----~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~ 175 (373)
. .|+--|.. + .-...+.+- ..+-.++.+.. +.+-.+..+|+++|-+--+.|-.
T Consensus 107 ------~--~V~ave~s-~-~~~~a~~~~~~n~~~~~i~~i~~~~----~~~~lpe~~DvivsE~~~~~l~~-------- 164 (376)
T 4hc4_A 107 ------R--RVYAVEAS-A-IWQQAREVVRFNGLEDRVHVLPGPV----ETVELPEQVDAIVSEWMGYGLLH-------- 164 (376)
T ss_dssp ------S--EEEEEECS-T-THHHHHHHHHHTTCTTTEEEEESCT----TTCCCSSCEEEEECCCCBTTBTT--------
T ss_pred ------C--EEEEEeCh-H-HHHHHHHHHHHcCCCceEEEEeeee----eeecCCccccEEEeecccccccc--------
Confidence 0 56666643 2 222222221 11223444433 33444578999999432221110
Q ss_pred CCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 176 RSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 176 ~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
+..+..+|.+|.+-|+|||+|+-
T Consensus 165 ---------------------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 165 ---------------------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ---------------------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred ---------------------------cchhhhHHHHHHhhCCCCceECC
Confidence 12556899999999999999873
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.77 E-value=5.8e-05 Score=68.27 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
..+|+|+|||+|..+..+
T Consensus 49 ~~~vLDiGcG~G~~~~~l 66 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARF 66 (226)
T ss_dssp TCEEEEESCTTSHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHH
Confidence 469999999999988877
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00021 Score=64.28 Aligned_cols=124 Identities=14% Similarity=0.083 Sum_probs=62.8
Q ss_pred CceEEeeecCC-CCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeec
Q 017363 62 GTFKLADFGCS-VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs-~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~g 138 (373)
...+|+|+||| +|..++.+.... ..+|+..|.-..-....=+.+. ..+--|..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~ 111 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-----------------------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKS 111 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-----------------------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-----------------------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeC
Confidence 45799999999 999998774331 0145555553221111111110 001223333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
....+ .-+|++++|+++++-.++|..... +.+. ..++..+. . ...+...||+.-.+-|+
T Consensus 112 d~~~~--~~~~~~~fD~I~~npp~~~~~~~~--~~~~-~~~~~~~~-----~-----------~~~~~~~~l~~~~~~Lk 170 (230)
T 3evz_A 112 NGGII--KGVVEGTFDVIFSAPPYYDKPLGR--VLTE-REAIGGGK-----Y-----------GEEFSVKLLEEAFDHLN 170 (230)
T ss_dssp SSCSS--TTTCCSCEEEEEECCCCC------------------CCS-----S-----------SCHHHHHHHHHHGGGEE
T ss_pred Cchhh--hhcccCceeEEEECCCCcCCcccc--ccCh-hhhhccCc-----c-----------chHHHHHHHHHHHHHhC
Confidence 32111 124568999999998888865421 1100 00010000 0 01234578888889999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++.+..
T Consensus 171 pgG~l~~~~~~ 181 (230)
T 3evz_A 171 PGGKVALYLPD 181 (230)
T ss_dssp EEEEEEEEEES
T ss_pred CCeEEEEEecc
Confidence 99999998643
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.75 E-value=5.9e-05 Score=68.17 Aligned_cols=104 Identities=9% Similarity=-0.017 Sum_probs=58.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCC---chhhHhhcCCCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGN---DFNTLFQTMPPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~N---DFn~lf~~l~~~~~~f~~g 138 (373)
...+|+|+|||+|..|..+.... . .-+|+--|+... ......+... +-.++.+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~--------~--------------~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~ 112 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIV--------D--------------EGIIYAVEYSAKPFEKLLELVRERN--NIIPLLF 112 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHT--------T--------------TSEEEEECCCHHHHHHHHHHHHHCS--SEEEECS
T ss_pred CCCEEEEECCcCCHHHHHHHHHc--------C--------------CCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEc
Confidence 34699999999999888773321 1 115777776532 1122222221 1223333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
..........+.+++|+++++.+-++ +...+|+.-++-||
T Consensus 113 d~~~~~~~~~~~~~fD~V~~~~~~~~----------------------------------------~~~~~l~~~~r~Lk 152 (210)
T 1nt2_A 113 DASKPWKYSGIVEKVDLIYQDIAQKN----------------------------------------QIEILKANAEFFLK 152 (210)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEE
T ss_pred CCCCchhhcccccceeEEEEeccChh----------------------------------------HHHHHHHHHHHHhC
Confidence 32211110222389999998731110 22346777788999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||+|++.+..
T Consensus 153 pgG~l~i~~~~ 163 (210)
T 1nt2_A 153 EKGEVVIMVKA 163 (210)
T ss_dssp EEEEEEEEEEH
T ss_pred CCCEEEEEEec
Confidence 99999999644
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.4e-05 Score=74.23 Aligned_cols=106 Identities=11% Similarity=0.094 Sum_probs=61.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---C---cccee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---S---RKYFA 136 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~---~~~f~ 136 (373)
..+|+|+|||+|..++.+... + |..+|+..|.-..--...=+++.. . +--|.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~--------~--------------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~ 280 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDK--------N--------------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 280 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHH--------C--------------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE
T ss_pred CCeEEEEeCcchHHHHHHHHH--------C--------------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE
Confidence 379999999999999887421 1 122667777642211111111110 0 11123
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+ .++. .+|++++|+++|+-.+|+...++.. ....||+.-.+-
T Consensus 281 ~~---D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~---------------------------------~~~~~l~~~~~~ 323 (375)
T 4dcm_A 281 IN---NALS-GVEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRC 323 (375)
T ss_dssp EC---STTT-TCCTTCEEEEEECCCC-------CC---------------------------------HHHHHHHHHHHH
T ss_pred ec---hhhc-cCCCCCeeEEEECCCcccCcccCHH---------------------------------HHHHHHHHHHHh
Confidence 33 3333 4578899999999999985444321 122578888889
Q ss_pred hccCCeEEEEe
Q 017363 217 LVPGGLIVFVL 227 (373)
Q Consensus 217 L~pGG~lvl~~ 227 (373)
|+|||+|+++.
T Consensus 324 LkpgG~l~iv~ 334 (375)
T 4dcm_A 324 LKINGELYIVA 334 (375)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999999975
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.8e-05 Score=67.20 Aligned_cols=117 Identities=19% Similarity=0.178 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
..+|+|+|||+|..|+.+... +..... +...+..+|+..|+...- .++ +.-+. ..+.
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~--------~~~~~~-----~~~~~~~~v~~vD~s~~~------~~~--~~~~~--~~~d 79 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQK--------VNAAGT-----DPSSPVGFVLGVDLLHIF------PLE--GATFL--CPAD 79 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHH--------TTTTCC-----CTTSCCCEEEEECSSCCC------CCT--TCEEE--CSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHH--------hccccc-----cccCCCceEEEEechhcc------cCC--CCeEE--Eecc
Confidence 479999999999999877332 211000 001122478888876421 011 11222 0122
Q ss_pred ccc--------CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 143 FHG--------RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 143 Fy~--------rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+.. ..+|.+++|+++|..++||.-... .+ + .........+|+.-.
T Consensus 80 ~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~---~~-----------------~-------~~~~~~~~~~l~~~~ 132 (196)
T 2nyu_A 80 VTDPRTSQRILEVLPGRRADVILSDMAPNATGFRD---LD-----------------H-------DRLISLCLTLLSVTP 132 (196)
T ss_dssp TTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHH---HH-----------------H-------HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcc---cC-----------------H-------HHHHHHHHHHHHHHH
Confidence 222 125667999999987777632110 00 0 001123346788888
Q ss_pred hhhccCCeEEEEecc
Q 017363 215 HELVPGGLIVFVLFS 229 (373)
Q Consensus 215 ~EL~pGG~lvl~~~g 229 (373)
+-|+|||+|++..+.
T Consensus 133 ~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 133 DILQPGGTFLCKTWA 147 (196)
T ss_dssp HHEEEEEEEEEEECC
T ss_pred HHhcCCCEEEEEecC
Confidence 899999999998764
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00019 Score=65.70 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=18.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
|...||+.-++-|||||+|++.
T Consensus 148 ~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 148 QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEEC
T ss_pred chhhhhhhhhheeCCCCEEEEE
Confidence 6667888888999999999764
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00029 Score=65.72 Aligned_cols=121 Identities=9% Similarity=0.091 Sum_probs=67.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.... |..+|+..|....-....=+.. ...+--|..+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~----------------------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~- 166 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER----------------------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS- 166 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC----------------------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC-
T ss_pred CCEEEEecCCccHHHHHHHHhC----------------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc-
Confidence 4699999999999988774221 1225666676432211111111 0011223333
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchh---hhhcC-CCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISK---EILDS-RSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~---~~~~~-~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
.+.. .+|++++|+++|+-..+|... +. .+... ...++..| ...-.++..+|+.-.+
T Consensus 167 --d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~----------------~~g~~~~~~~l~~~~~ 226 (276)
T 2b3t_A 167 --DWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA----------------DSGMADIVHIIEQSRN 226 (276)
T ss_dssp --STTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH----------------HHHTHHHHHHHHHHGG
T ss_pred --chhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC----------------CcHHHHHHHHHHHHHH
Confidence 2232 245788999999988888764 21 11110 00010000 0112356688999999
Q ss_pred hhccCCeEEEE
Q 017363 216 ELVPGGLIVFV 226 (373)
Q Consensus 216 EL~pGG~lvl~ 226 (373)
-|+|||++++.
T Consensus 227 ~LkpgG~l~~~ 237 (276)
T 2b3t_A 227 ALVSGGFLLLE 237 (276)
T ss_dssp GEEEEEEEEEE
T ss_pred hcCCCCEEEEE
Confidence 99999999987
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.63 E-value=5.4e-05 Score=66.49 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=63.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---C-Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---P-SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~-~~~~f~~g 138 (373)
..+|+|+|||+|..++.+.... . +.-+|+.-|+-..-....=+.+. - .+--|..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~--------~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 81 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLV--------G-------------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD 81 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHH--------C-------------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS
T ss_pred CCEEEEcCCCCCHHHHHHHHHh--------C-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 4699999999999888774432 1 11256777765332222111111 0 11223333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
....+-. ++++++|+++++..+ .|.. ++ .+. .. ..|...+|+.-.+-|+
T Consensus 82 d~~~~~~--~~~~~fD~v~~~~~~-----~~~~--~~--------~~~---~~-----------~~~~~~~l~~~~~~Lk 130 (197)
T 3eey_A 82 GHQNMDK--YIDCPVKAVMFNLGY-----LPSG--DH--------SIS---TR-----------PETTIQALSKAMELLV 130 (197)
T ss_dssp CGGGGGG--TCCSCEEEEEEEESB-----CTTS--CT--------TCB---CC-----------HHHHHHHHHHHHHHEE
T ss_pred CHHHHhh--hccCCceEEEEcCCc-----ccCc--cc--------ccc---cC-----------cccHHHHHHHHHHhCc
Confidence 3211111 456899999988666 1211 00 000 00 1144468888889999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++....
T Consensus 131 ~gG~l~~~~~~ 141 (197)
T 3eey_A 131 TGGIITVVIYY 141 (197)
T ss_dssp EEEEEEEEECC
T ss_pred CCCEEEEEEcc
Confidence 99999988753
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00021 Score=64.80 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=58.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvp 140 (373)
...+|+|+|||+|..++.+.+.. . .-+|+--|....-...+-+.... .+-.|..+..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~--------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~ 131 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA--------D--------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDA 131 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT--------T--------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT
T ss_pred CCCEEEEEcccCCHHHHHHHHHc--------C--------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC
Confidence 35689999999999998774332 1 11566666543222211111111 1223444433
Q ss_pred ccccc-CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 141 GSFHG-RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 141 gSFy~-rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
..... ..++ +++|+++ |++... .....+|+.-.+-|+|
T Consensus 132 ~~~~~~~~~~-~~~D~v~-----~~~~~~-----------------------------------~~~~~~l~~~~~~Lkp 170 (230)
T 1fbn_A 132 NKPQEYANIV-EKVDVIY-----EDVAQP-----------------------------------NQAEILIKNAKWFLKK 170 (230)
T ss_dssp TCGGGGTTTS-CCEEEEE-----ECCCST-----------------------------------THHHHHHHHHHHHEEE
T ss_pred CCcccccccC-ccEEEEE-----EecCCh-----------------------------------hHHHHHHHHHHHhCCC
Confidence 22111 2334 7899998 443211 0123567777889999
Q ss_pred CCeEEEEec
Q 017363 220 GGLIVFVLF 228 (373)
Q Consensus 220 GG~lvl~~~ 228 (373)
||++++.+.
T Consensus 171 gG~l~i~~~ 179 (230)
T 1fbn_A 171 GGYGMIAIK 179 (230)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999843
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=6e-05 Score=69.96 Aligned_cols=97 Identities=18% Similarity=0.121 Sum_probs=56.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|..++.+.. . .+ +|+..|....-....-+.... ..--|..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~--------~--------------g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~--- 173 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEK--------L--------------GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLE--- 173 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHH--------T--------------TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEE---
T ss_pred CCEEEEecCCCcHHHHHHHH--------h--------------CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEE---
Confidence 46999999999998876521 1 11 566666643322221111110 0011222
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+++.. .+|++++|+++++...|++ ..++..-.+-|+||
T Consensus 174 ~d~~~-~~~~~~fD~Vv~n~~~~~~-----------------------------------------~~~l~~~~~~Lkpg 211 (254)
T 2nxc_A 174 GSLEA-ALPFGPFDLLVANLYAELH-----------------------------------------AALAPRYREALVPG 211 (254)
T ss_dssp SCHHH-HGGGCCEEEEEEECCHHHH-----------------------------------------HHHHHHHHHHEEEE
T ss_pred CChhh-cCcCCCCCEEEECCcHHHH-----------------------------------------HHHHHHHHHHcCCC
Confidence 22222 2467889999987655442 24666667889999
Q ss_pred CeEEEEec
Q 017363 221 GLIVFVLF 228 (373)
Q Consensus 221 G~lvl~~~ 228 (373)
|+++++..
T Consensus 212 G~lils~~ 219 (254)
T 2nxc_A 212 GRALLTGI 219 (254)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEee
Confidence 99998643
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00033 Score=61.75 Aligned_cols=98 Identities=11% Similarity=-0.050 Sum_probs=58.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc---CCCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT---MPPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~---l~~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.... |..+++..|....-....=+. ....+--|..+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~----------------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 123 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR----------------------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSR 123 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC----------------------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCeEEEECCCCCHHHHHHHHHC----------------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecc
Confidence 3599999999999998874321 122667777643221111111 111111233332
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+. .+.|++++|++++... .++..+|+.-.+-|+|
T Consensus 124 ---~~-~~~~~~~~D~i~~~~~------------------------------------------~~~~~~l~~~~~~L~~ 157 (207)
T 1jsx_A 124 ---VE-EFPSEPPFDGVISRAF------------------------------------------ASLNDMVSWCHHLPGE 157 (207)
T ss_dssp ---TT-TSCCCSCEEEEECSCS------------------------------------------SSHHHHHHHHTTSEEE
T ss_pred ---hh-hCCccCCcCEEEEecc------------------------------------------CCHHHHHHHHHHhcCC
Confidence 22 2336688999997421 1344688888899999
Q ss_pred CCeEEEEec
Q 017363 220 GGLIVFVLF 228 (373)
Q Consensus 220 GG~lvl~~~ 228 (373)
||++++...
T Consensus 158 gG~l~~~~~ 166 (207)
T 1jsx_A 158 QGRFYALKG 166 (207)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999854
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00038 Score=69.88 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
..-+|+|+|||+|..++.+.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA 192 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA 192 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 35789999999999998775
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=70.56 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=64.5
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeeccCc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGVPG 141 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gvpg 141 (373)
-+|+|+|||+|..++.+... . |..+|+..|....--...=+.+. .....+..+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~--------~--------------~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~--- 252 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARH--------S--------------PKIRLTLCDVSAPAVEASRATLAANGVEGEVFAS--- 252 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHH--------C--------------TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC---
T ss_pred CeEEEecCccCHHHHHHHHH--------C--------------CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc---
Confidence 48999999999999877321 1 12356666664321111111110 011122222
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.+.. ++++++|+++|+..+||..... ..+...||+.-.+-|+|||
T Consensus 253 d~~~--~~~~~fD~Iv~~~~~~~g~~~~---------------------------------~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 253 NVFS--EVKGRFDMIISNPPFHDGMQTS---------------------------------LDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp STTT--TCCSCEEEEEECCCCCSSSHHH---------------------------------HHHHHHHHHHHGGGEEEEE
T ss_pred cccc--cccCCeeEEEECCCcccCccCC---------------------------------HHHHHHHHHHHHHhCCCCc
Confidence 3333 2468999999999999843211 1256689999999999999
Q ss_pred eEEEEec
Q 017363 222 LIVFVLF 228 (373)
Q Consensus 222 ~lvl~~~ 228 (373)
+|++...
T Consensus 298 ~l~i~~~ 304 (343)
T 2pjd_A 298 ELRIVAN 304 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999764
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00017 Score=67.06 Aligned_cols=125 Identities=11% Similarity=0.087 Sum_probs=64.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---C----ccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---S----RKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~----~~~ 134 (373)
...+|+|+|||+|..++.+.+.. |..+|+..|+-..-....=+++.. . +-.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~----------------------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~ 93 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL----------------------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIE 93 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC----------------------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEE
T ss_pred CCCEEEEeCChHhHHHHHHHHhC----------------------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEE
Confidence 45799999999999998774321 112455555532211111111111 0 112
Q ss_pred eeeccCccccc----CCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHH-HHhhcHHHH
Q 017363 135 FAFGVPGSFHG----RLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSA-QFKNDTEAF 209 (373)
Q Consensus 135 f~~gvpgSFy~----rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~-Q~~~D~~~F 209 (373)
++.+....+.. ..+|++++|+|+|+-..++..... .+...++.+. ....++..|
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~---------------------~~~~~~~~a~~~~~~~~~~~ 152 (260)
T 2ozv_A 94 VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR---------------------TPDALKAEAHAMTEGLFEDW 152 (260)
T ss_dssp EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC------------------------------------------CCHHHH
T ss_pred EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC---------------------CcCHHHHHHhhcCcCCHHHH
Confidence 33333222211 236788999999996666542100 0011111111 112357889
Q ss_pred HHHHHhhhccCCeEEEEecc
Q 017363 210 LNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 210 L~~Ra~EL~pGG~lvl~~~g 229 (373)
|+.-++-|+|||+|++....
T Consensus 153 l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 153 IRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHHHHEEEEEEEEEEECG
T ss_pred HHHHHHHcCCCCEEEEEEcH
Confidence 99999999999999997643
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00032 Score=64.80 Aligned_cols=125 Identities=10% Similarity=-0.002 Sum_probs=64.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~ 137 (373)
...+|+|+|||+|..++.+.+. .+. +|+..|+-..-....-+.+ +- .+--+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~----------------------~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~ 105 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTR----------------------TKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIE 105 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTT----------------------CCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHh----------------------cCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEE
Confidence 4579999999999988876311 111 5677776433222211111 11 1123444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+....+- ..+|++++|+|+|+-.++..+.. .+.+ +......-......++..||+.-++-|
T Consensus 106 ~D~~~~~-~~~~~~~fD~Ii~npPy~~~~~~--~~~~----------------~~~~~~~a~~~~~~~~~~~l~~~~~~L 166 (259)
T 3lpm_A 106 YDLKKIT-DLIPKERADIVTCNPPYFATPDT--SLKN----------------TNEHFRIARHEVMCTLEDTIRVAASLL 166 (259)
T ss_dssp SCGGGGG-GTSCTTCEEEEEECCCC-----------------------------------------HHHHHHHHHHHHHE
T ss_pred CcHHHhh-hhhccCCccEEEECCCCCCCccc--cCCC----------------CchHHHhhhccccCCHHHHHHHHHHHc
Confidence 4433322 22568999999998665543110 0000 000000000112346778999999999
Q ss_pred ccCCeEEEEec
Q 017363 218 VPGGLIVFVLF 228 (373)
Q Consensus 218 ~pGG~lvl~~~ 228 (373)
+|||+|++...
T Consensus 167 kpgG~l~~~~~ 177 (259)
T 3lpm_A 167 KQGGKANFVHR 177 (259)
T ss_dssp EEEEEEEEEEC
T ss_pred cCCcEEEEEEc
Confidence 99999999653
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.50 E-value=2.7e-05 Score=70.43 Aligned_cols=22 Identities=14% Similarity=-0.016 Sum_probs=18.6
Q ss_pred CCCCcceEEEccCcccccccch
Q 017363 148 FPKSSLHFANSSSSLNWLSKIS 169 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P 169 (373)
.|+.++|++.++..||-|.+.+
T Consensus 111 ~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 111 VYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp HTTSEEEEEEEETCHHHHHHTT
T ss_pred CCCCCcChhhHhhHHHhhhhhH
Confidence 5788999999999999995444
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=6.6e-05 Score=69.16 Aligned_cols=115 Identities=14% Similarity=0.013 Sum_probs=61.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhh---HhhcC-----CC-Cc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNT---LFQTM-----PP-SR 132 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~---lf~~l-----~~-~~ 132 (373)
+..+|+|+|||+|..++.+... .|...|+--|+-..--.. .++.+ .. .+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~----------------------~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~n 103 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPL----------------------FPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQN 103 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGG----------------------STTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTT
T ss_pred CCCeEEEEccCCcHHHHHHHHH----------------------CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 4679999999999999877311 122245555543211110 00000 00 11
Q ss_pred cceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHH
Q 017363 133 KYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNA 212 (373)
Q Consensus 133 ~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 212 (373)
--|+.+....+....||++++|.+++++.-.|..+.- .|.++ ....||+.
T Consensus 104 v~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h-----------~krr~-------------------~~~~~l~~ 153 (235)
T 3ckk_A 104 IACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTK-----------HKWRI-------------------ISPTLLAE 153 (235)
T ss_dssp EEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C-------------------CCHHHHHH
T ss_pred EEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhh-----------hhhhh-------------------hhHHHHHH
Confidence 2244444333233447889999999888777743210 00011 11368888
Q ss_pred HHhhhccCCeEEEEec
Q 017363 213 RAHELVPGGLIVFVLF 228 (373)
Q Consensus 213 Ra~EL~pGG~lvl~~~ 228 (373)
-++-|+|||+|++.+.
T Consensus 154 ~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 154 YAYVLRVGGLVYTITD 169 (235)
T ss_dssp HHHHEEEEEEEEEEES
T ss_pred HHHHCCCCCEEEEEeC
Confidence 8899999999998763
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00018 Score=65.12 Aligned_cols=104 Identities=12% Similarity=0.024 Sum_probs=60.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCC---chhhHhhcCCCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGN---DFNTLFQTMPPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~N---DFn~lf~~l~~~~~~f~~gv 139 (373)
..+|+|+|||+|..+..+.+.. . +.-+|+--|+... +.....+.. .+-.|..+.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~--------g-------------~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d 134 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIV--------G-------------PDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIED 134 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------C-------------TTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSC
T ss_pred CCEEEEEcccCCHHHHHHHHHh--------C-------------CCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcc
Confidence 4699999999999998874432 1 1125677776532 222222222 122344443
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
......--++++++|++++..+ .|. ....++..-.+-|+|
T Consensus 135 ~~~~~~~~~~~~~~D~V~~~~~------~~~----------------------------------~~~~~~~~~~~~Lkp 174 (233)
T 2ipx_A 135 ARHPHKYRMLIAMVDVIFADVA------QPD----------------------------------QTRIVALNAHTFLRN 174 (233)
T ss_dssp TTCGGGGGGGCCCEEEEEECCC------CTT----------------------------------HHHHHHHHHHHHEEE
T ss_pred cCChhhhcccCCcEEEEEEcCC------Ccc----------------------------------HHHHHHHHHHHHcCC
Confidence 3221111235679999998544 110 122466667789999
Q ss_pred CCeEEEEecc
Q 017363 220 GGLIVFVLFS 229 (373)
Q Consensus 220 GG~lvl~~~g 229 (373)
||++++.+..
T Consensus 175 gG~l~i~~~~ 184 (233)
T 2ipx_A 175 GGHFVISIKA 184 (233)
T ss_dssp EEEEEEEEEH
T ss_pred CeEEEEEEcc
Confidence 9999997654
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00029 Score=70.39 Aligned_cols=131 Identities=15% Similarity=0.126 Sum_probs=77.7
Q ss_pred CceEEeeecCC------CCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccce
Q 017363 62 GTFKLADFGCS------VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYF 135 (373)
Q Consensus 62 ~~~~IaD~GCs------~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f 135 (373)
+..+|+|+||| +|..|+.++... + |..+|+--|+..+. .+ ...+--|
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~-------f--------------P~a~V~GVDiSp~m---~~---~~~rI~f 268 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF-------F--------------PRGQIYGLDIMDKS---HV---DELRIRT 268 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH-------C--------------TTCEEEEEESSCCG---GG---CBTTEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh-------C--------------CCCEEEEEECCHHH---hh---cCCCcEE
Confidence 46899999999 788887764332 1 12378888886653 11 1123345
Q ss_pred eeccCcc--cccCCC-CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHH
Q 017363 136 AFGVPGS--FHGRLF-PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNA 212 (373)
Q Consensus 136 ~~gvpgS--Fy~rlf-P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 212 (373)
..|...+ |-.++. +++++|+|+|..+ ||.. |+..+|+.
T Consensus 269 v~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--------------------------------------d~~~aL~e 309 (419)
T 3sso_A 269 IQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--------------------------------------HVRTSFAA 309 (419)
T ss_dssp EECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH--------------------------------------HHHHHHHH
T ss_pred EEecccccchhhhhhcccCCccEEEECCc-ccch--------------------------------------hHHHHHHH
Confidence 5555432 111111 1689999999865 5522 44467888
Q ss_pred HHhhhccCCeEEEEeccCCCC----CCcc-CCCchhHHHHHHHHHHHHhhc
Q 017363 213 RAHELVPGGLIVFVLFSLPNG----VPMI-DSNGGKLYGFLGSCLIDMTTK 258 (373)
Q Consensus 213 Ra~EL~pGG~lvl~~~g~~~~----~~~~-~~~~~~~~~~l~~al~~mv~e 258 (373)
-.+-|||||+|++.-+...-. .... ......+.+.++..+..+-.+
T Consensus 310 l~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 310 LFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp HGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred HHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 889999999999975532100 0000 011233677777777766554
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00023 Score=65.86 Aligned_cols=106 Identities=8% Similarity=-0.005 Sum_probs=56.0
Q ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCC
Q 017363 23 SYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQN 102 (373)
Q Consensus 23 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~ 102 (373)
.|......|.+....+...++ . +. .....+|+|+|||+|..|..+.+.+ .
T Consensus 50 ~yr~w~~~~skla~~ll~~l~----~---~~------l~~g~~VLDlG~GtG~~t~~la~~v--------~--------- 99 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLK----T---NP------IRKGTKVLYLGAASGTTISHVSDII--------E--------- 99 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCS----C---CS------CCTTCEEEEETCTTSHHHHHHHHHH--------T---------
T ss_pred chhhhchHHHHHHHHHHhhhh----h---cC------CCCCCEEEEEeecCCHHHHHHHHHh--------C---------
Confidence 366667778777654322221 1 11 1235899999999999888774332 1
Q ss_pred CCCCceeEEEecCCCCCchhhHhhcCC-CCccceeeccCcccccCCCCCCcceEEEccCcc
Q 017363 103 SSSALEFQVFFNDHYGNDFNTLFQTMP-PSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSL 162 (373)
Q Consensus 103 ~~~~~~~~v~~nDLp~NDFn~lf~~l~-~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~al 162 (373)
+.-+|+--|+-...-..|.+... ..+-.++.+............+++|+++|..+.
T Consensus 100 ----~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 100 ----LNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp ----TTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred ----CCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 11267777775432111111100 112334455443221111224689999998764
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00032 Score=60.28 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=18.3
Q ss_pred HHHHHHHhhhccCCeEEEEecc
Q 017363 208 AFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.+|+.-.+-|+|||++++....
T Consensus 115 ~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 115 EILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHHHHHHHTEEEEEEEEEEECB
T ss_pred HHHHHHHHhcCCCcEEEEEecC
Confidence 5777778899999999997653
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.48 E-value=9.8e-05 Score=65.72 Aligned_cols=80 Identities=9% Similarity=-0.017 Sum_probs=43.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
..+|+|+|||+|..+..+.... . +..+|+..|...+-....-+.+ ...+--|..+.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~--------~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIV--------G-------------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------C-------------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred CCEEEEECCCccHHHHHHHHHh--------C-------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 4699999999999998774322 0 1125666665432211111111 10111222222
Q ss_pred CcccccCCCCCCcceEEEccCcccccc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
+...+.+.+++|+++++.++||+.
T Consensus 137 ---~~~~~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 137 ---GTLGYEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp ---GGGCCGGGCCEEEEEESSBBSSCC
T ss_pred ---cccCCCCCCCeeEEEECCchHHHH
Confidence 222222367899999999999854
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00013 Score=69.15 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=32.5
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
.+++|+|+|.+.|+|+.. + +....|+.-++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~-~-----------------------------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK-T-----------------------------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH-H-----------------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999862 1 224678888899999999976
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00024 Score=64.78 Aligned_cols=22 Identities=14% Similarity=0.084 Sum_probs=18.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
|+..+|+.-.+-|+|||++++.
T Consensus 152 ~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 152 RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCCEEEEE
Confidence 4557888888999999999886
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00018 Score=64.66 Aligned_cols=77 Identities=10% Similarity=-0.032 Sum_probs=42.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC-ccceeeccCc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS-RKYFAFGVPG 141 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~-~~~f~~gvpg 141 (373)
..+|+|+|||+|..+..+.... .+|+..|....-....-+.+... +--|..+.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~------------------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d-- 124 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV------------------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGD-- 124 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS------------------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESC--
T ss_pred CCEEEEEcCCCCHHHHHHHHHc------------------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECC--
Confidence 4699999999999998774321 03444444321111111111111 11222222
Q ss_pred ccccCCCCCCcceEEEccCcccccc
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
+...+.+++++|++++..++|++.
T Consensus 125 -~~~~~~~~~~fD~v~~~~~~~~~~ 148 (231)
T 1vbf_A 125 -GTLGYEEEKPYDRVVVWATAPTLL 148 (231)
T ss_dssp -GGGCCGGGCCEEEEEESSBBSSCC
T ss_pred -cccccccCCCccEEEECCcHHHHH
Confidence 222233467899999999999853
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00015 Score=69.77 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|+.+..
T Consensus 106 g~~VLDiG~G~G~~~~~la~ 125 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSK 125 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHH
Confidence 46999999999999998744
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00036 Score=62.76 Aligned_cols=22 Identities=9% Similarity=-0.005 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQN 83 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ 83 (373)
...+|+|+|||+|..++.+.+.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~ 94 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDI 94 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHH
Confidence 3469999999999999888443
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0015 Score=58.28 Aligned_cols=20 Identities=20% Similarity=0.038 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|..++.+.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la 74 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWC 74 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 34799999999999998774
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.40 E-value=4.8e-05 Score=66.93 Aligned_cols=128 Identities=13% Similarity=-0.007 Sum_probs=60.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC--ccceeec
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS--RKYFAFG 138 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~--~~~f~~g 138 (373)
....+|+|+|||+|..++.+.... +..+++.-|+-..-....=+.+... +--|..+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~----------------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC----------------------PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC----------------------TTEEEEEEECC-------------------CCHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC----------------------CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 356899999999999888773321 1236777777543222111111111 1112222
Q ss_pred cCcccccCCCCC-----CcceEEEccCcccccccc---hhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHH
Q 017363 139 VPGSFHGRLFPK-----SSLHFANSSSSLNWLSKI---SKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFL 210 (373)
Q Consensus 139 vpgSFy~rlfP~-----~Svd~~~Ss~alHWLS~~---P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL 210 (373)
.+.+ .+++ +++|+++++-.+|+.... +..+.... + .....+ .......+..||
T Consensus 87 ---d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------~~~~~~~~~~~l 147 (215)
T 4dzr_A 87 ---DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYE-P-----RLALDG---------GEDGLQFYRRMA 147 (215)
T ss_dssp ---HHHH-HHHHHHHTTCCBSEEEECCCCCC---------------------------------------CTTHHHHHHH
T ss_pred ---chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccC-c-----cccccC---------CCcHHHHHHHHH
Confidence 2333 4444 899999998777664432 11111000 0 000000 000112346788
Q ss_pred HHHHhhhccCCeEEEEecc
Q 017363 211 NARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 211 ~~Ra~EL~pGG~lvl~~~g 229 (373)
+.-.+-|+|||+|++...+
T Consensus 148 ~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 148 ALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp TCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHhcCCCeEEEEEEC
Confidence 8888999999994444443
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=65.55 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=58.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..+..+.... +..+++.-|....--...-+..+ +-.|..+..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~----------------------~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~d~- 139 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL----------------------PEITTFGLDVSKVAIKAAAKRYP--QVTFCVASS- 139 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC----------------------TTSEEEEEESCHHHHHHHHHHCT--TSEEEECCT-
T ss_pred CCCEEEEECCCCCHHHHHHHHhC----------------------CCCeEEEEeCCHHHHHHHHHhCC--CcEEEEcch-
Confidence 35699999999999998773221 11256777765332222111111 112333332
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
..--++++++|+++++.+.+ +|+.-.+-|+|||
T Consensus 140 --~~~~~~~~~fD~v~~~~~~~---------------------------------------------~l~~~~~~L~pgG 172 (269)
T 1p91_A 140 --HRLPFSDTSMDAIIRIYAPC---------------------------------------------KAEELARVVKPGG 172 (269)
T ss_dssp --TSCSBCTTCEEEEEEESCCC---------------------------------------------CHHHHHHHEEEEE
T ss_pred --hhCCCCCCceeEEEEeCChh---------------------------------------------hHHHHHHhcCCCc
Confidence 22236788999999865411 2334456799999
Q ss_pred eEEEEeccCC
Q 017363 222 LIVFVLFSLP 231 (373)
Q Consensus 222 ~lvl~~~g~~ 231 (373)
++++..++.+
T Consensus 173 ~l~~~~~~~~ 182 (269)
T 1p91_A 173 WVITATPGPR 182 (269)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEcCHH
Confidence 9999988764
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00022 Score=65.16 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=59.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCc-cceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSR-KYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~-~~f~~ 137 (373)
...+|+|+|||+|..++.+...+ . |..+++..|+...-....=+.+ .-.. --+..
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~--------~-------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~ 151 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV--------G-------------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL 151 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------C-------------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC
T ss_pred CCCEEEEecCCchHHHHHHHHHh--------C-------------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 35689999999999998874432 1 1226777777532222111111 1011 22333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ .+. ..+|++++|++++.. |. ...+|+.-.+-|
T Consensus 152 ~---d~~-~~~~~~~~D~v~~~~--------~~-----------------------------------~~~~l~~~~~~L 184 (255)
T 3mb5_A 152 K---DIY-EGIEEENVDHVILDL--------PQ-----------------------------------PERVVEHAAKAL 184 (255)
T ss_dssp S---CGG-GCCCCCSEEEEEECS--------SC-----------------------------------GGGGHHHHHHHE
T ss_pred C---chh-hccCCCCcCEEEECC--------CC-----------------------------------HHHHHHHHHHHc
Confidence 3 333 447889999999832 20 113566777899
Q ss_pred ccCCeEEEEecc
Q 017363 218 VPGGLIVFVLFS 229 (373)
Q Consensus 218 ~pGG~lvl~~~g 229 (373)
+|||++++...+
T Consensus 185 ~~gG~l~~~~~~ 196 (255)
T 3mb5_A 185 KPGGFFVAYTPC 196 (255)
T ss_dssp EEEEEEEEEESS
T ss_pred CCCCEEEEEECC
Confidence 999999987543
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00081 Score=64.52 Aligned_cols=97 Identities=8% Similarity=-0.042 Sum_probs=59.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~~~~~f~~ 137 (373)
..-+|+|+|||+|+.|..++... +..+|+--|.-..- -...+.. .-.+--|..
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~----------------------~ga~V~gIDis~~~-l~~Ar~~~~~~gl~~v~~v~ 178 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV----------------------YGMRVNVVEIEPDI-AELSRKVIEGLGVDGVNVIT 178 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT----------------------TCCEEEEEESSHHH-HHHHHHHHHHHTCCSEEEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHc----------------------cCCEEEEEECCHHH-HHHHHHHHHhcCCCCeEEEE
Confidence 46799999999999887664321 11245555554211 1111111 112233555
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
|.... +|++++|++++... +| |...+|+.-.+-|
T Consensus 179 gDa~~-----l~d~~FDvV~~~a~------~~-----------------------------------d~~~~l~el~r~L 212 (298)
T 3fpf_A 179 GDETV-----IDGLEFDVLMVAAL------AE-----------------------------------PKRRVFRNIHRYV 212 (298)
T ss_dssp SCGGG-----GGGCCCSEEEECTT------CS-----------------------------------CHHHHHHHHHHHC
T ss_pred Cchhh-----CCCCCcCEEEECCC------cc-----------------------------------CHHHHHHHHHHHc
Confidence 55422 36789999997543 22 4456888888999
Q ss_pred ccCCeEEEEe
Q 017363 218 VPGGLIVFVL 227 (373)
Q Consensus 218 ~pGG~lvl~~ 227 (373)
+|||+|++..
T Consensus 213 kPGG~Lvv~~ 222 (298)
T 3fpf_A 213 DTETRIIYRT 222 (298)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999865
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00036 Score=62.16 Aligned_cols=18 Identities=22% Similarity=0.026 Sum_probs=15.8
Q ss_pred eEEeeecCCCCcccHHHH
Q 017363 64 FKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~ 81 (373)
.+|+|+|||+|..++.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHH
Confidence 589999999999998753
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00075 Score=60.09 Aligned_cols=18 Identities=17% Similarity=0.028 Sum_probs=15.8
Q ss_pred eEEeeecCCCCcccHHHH
Q 017363 64 FKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~ 81 (373)
.+|+|+|||+|..++.++
T Consensus 56 ~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHH
Confidence 689999999999998753
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00033 Score=64.94 Aligned_cols=100 Identities=17% Similarity=0.246 Sum_probs=58.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC------CCcccee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP------PSRKYFA 136 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~------~~~~~f~ 136 (373)
..+|+|+|||+|..+..+...+ . |..+|+.-|.-..-....-+.+. ..+--+
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~--------~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~- 157 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAV--------G-------------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRL- 157 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------C-------------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEE-
T ss_pred CCEEEEEcccccHHHHHHHHHh--------C-------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEE-
Confidence 4689999999999998774432 0 11267777764322111111110 011122
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+.+.+.+..+|++++|++++...-.| .+|+.-.+-
T Consensus 158 --~~~d~~~~~~~~~~~D~v~~~~~~~~-------------------------------------------~~l~~~~~~ 192 (280)
T 1i9g_A 158 --VVSDLADSELPDGSVDRAVLDMLAPW-------------------------------------------EVLDAVSRL 192 (280)
T ss_dssp --ECSCGGGCCCCTTCEEEEEEESSCGG-------------------------------------------GGHHHHHHH
T ss_pred --EECchHhcCCCCCceeEEEECCcCHH-------------------------------------------HHHHHHHHh
Confidence 23344444567889999998321111 356667788
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||++++....
T Consensus 193 L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 193 LVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEEEEEESS
T ss_pred CCCCCEEEEEeCC
Confidence 9999999998764
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00079 Score=65.35 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=15.8
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
..+|+|+|||+|..++.+
T Consensus 51 ~~~VLDiGcGtG~ls~~l 68 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFA 68 (348)
T ss_dssp TCEEEEETCTTSHHHHHH
T ss_pred cCEEEEcCCCccHHHHHH
Confidence 469999999999988766
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0002 Score=66.94 Aligned_cols=99 Identities=8% Similarity=0.084 Sum_probs=59.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~~~~~f~~ 137 (373)
...+|+|+|||+|..++.+...+ . |..+|+.-|+...-....-+.+ ...+--|..
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~--------~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~ 168 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL--------N-------------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR 168 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------T-------------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC
T ss_pred CcCEEEEecCCCCHHHHHHHHHc--------C-------------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 35699999999999988774432 0 1226777777432222111111 111222333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+. +.. .+|++++|++++ |+ | |...+|+.-.+-|
T Consensus 169 ~d---~~~-~~~~~~fD~Vi~----~~----~-----------------------------------~~~~~l~~~~~~L 201 (275)
T 1yb2_A 169 SD---IAD-FISDQMYDAVIA----DI----P-----------------------------------DPWNHVQKIASMM 201 (275)
T ss_dssp SC---TTT-CCCSCCEEEEEE----CC----S-----------------------------------CGGGSHHHHHHTE
T ss_pred Cc---hhc-cCcCCCccEEEE----cC----c-----------------------------------CHHHHHHHHHHHc
Confidence 33 333 567789999998 22 2 1114677777889
Q ss_pred ccCCeEEEEec
Q 017363 218 VPGGLIVFVLF 228 (373)
Q Consensus 218 ~pGG~lvl~~~ 228 (373)
+|||++++...
T Consensus 202 kpgG~l~i~~~ 212 (275)
T 1yb2_A 202 KPGSVATFYLP 212 (275)
T ss_dssp EEEEEEEEEES
T ss_pred CCCCEEEEEeC
Confidence 99999999874
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00018 Score=69.61 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=68.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cC--C-CCcccee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TM--P-PSRKYFA 136 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l--~-~~~~~f~ 136 (373)
+++.+|+|+|||+|..+..+... + |..++..-|+-..- -.+.+ .+ + ..+--+.
T Consensus 88 p~~~rVLdIG~G~G~la~~la~~--------~--------------p~~~v~~VEidp~v-i~~Ar~~~~~~~~~rv~v~ 144 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFADV--------Y--------------PQSRNTVVELDAEL-ARLSREWFDIPRAPRVKIR 144 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHHHH--------S--------------TTCEEEEEESCHHH-HHHHHHHSCCCCTTTEEEE
T ss_pred CCCCEEEEEECCcCHHHHHHHHH--------C--------------CCcEEEEEECCHHH-HHHHHHhccccCCCceEEE
Confidence 45689999999999888777321 1 12245555553211 11111 11 1 1223355
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+....|-.. ++++++|+|++....||- .|..+.. ..||+.-.+-
T Consensus 145 ~~Da~~~l~~-~~~~~fDvIi~D~~~~~~--~~~~L~t--------------------------------~efl~~~~r~ 189 (317)
T 3gjy_A 145 VDDARMVAES-FTPASRDVIIRDVFAGAI--TPQNFTT--------------------------------VEFFEHCHRG 189 (317)
T ss_dssp ESCHHHHHHT-CCTTCEEEEEECCSTTSC--CCGGGSB--------------------------------HHHHHHHHHH
T ss_pred ECcHHHHHhh-ccCCCCCEEEECCCCccc--cchhhhH--------------------------------HHHHHHHHHh
Confidence 5665554433 367899999998877762 3333211 2688888999
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||+|++...+
T Consensus 190 LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 190 LAPGGLYVANCGD 202 (317)
T ss_dssp EEEEEEEEEEEEE
T ss_pred cCCCcEEEEEecC
Confidence 9999999998864
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00011 Score=66.68 Aligned_cols=79 Identities=15% Similarity=-0.052 Sum_probs=46.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~g 138 (373)
..+|+|+|||+|..++.+... . .+|+..|+-..-....=+.+ .- .+--|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--------~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 134 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--------G----------------MRVIAIDIDPVKIALARNNAEVYGIADKIEFICG 134 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--------T----------------CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred CCEEEECccccCHHHHHHHHc--------C----------------CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC
Confidence 468999999999999988431 0 15566665432221111111 10 11223443
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccch
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKIS 169 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P 169 (373)
.. . .+.|++++|+++++..+||.....
T Consensus 135 d~---~-~~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 135 DF---L-LLASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp CH---H-HHGGGCCCSEEEECCCCSSGGGGG
T ss_pred Ch---H-HhcccCCCCEEEECCCcCCcchhh
Confidence 33 2 223678999999999999977544
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0011 Score=63.29 Aligned_cols=80 Identities=9% Similarity=-0.007 Sum_probs=44.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~~~~~f~~gv 139 (373)
..+|+|+|||+|..++.+.... .. ..+|+..|+..+-.... ++...-.+--|..+.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~--------~~-------------~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d 134 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVV--------GE-------------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD 134 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------CT-------------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred cCEEEEecCCchHHHHHHHHhc--------CC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 4699999999999888774332 10 11466666543221111 111111112233333
Q ss_pred CcccccCCCCCCcceEEEccCcccccc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
+..-+.+.+++|++++...+|++.
T Consensus 135 ---~~~~~~~~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 135 ---GYYGVPEFSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp ---GGGCCGGGCCEEEEEECSBBSCCC
T ss_pred ---hhhccccCCCeEEEEEcCCHHHHH
Confidence 233334568899999999999853
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00045 Score=59.52 Aligned_cols=19 Identities=21% Similarity=-0.019 Sum_probs=16.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..++.++
T Consensus 45 ~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SCEEEETTCTTCHHHHHHH
T ss_pred CCCEEEeCCccCHHHHHHH
Confidence 4699999999999998763
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.002 Score=54.90 Aligned_cols=20 Identities=25% Similarity=0.317 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|..++.+.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~ 54 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA 54 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 34699999999999988874
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0015 Score=59.16 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..+..+..
T Consensus 92 ~~~vLdiG~G~G~~~~~la~ 111 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISE 111 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHH
Confidence 45899999999999987743
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0016 Score=59.56 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=18.3
Q ss_pred cHHHHHHHHHhhhccCCeEEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
+...||+.-++-|+|||+|+++
T Consensus 192 ~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 192 PVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEe
Confidence 4557888888899999999984
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00092 Score=61.91 Aligned_cols=23 Identities=17% Similarity=-0.021 Sum_probs=18.6
Q ss_pred cHHHHHHHHHhhhccCCeEEEEe
Q 017363 205 DTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
++..+++.-.+-|+|||+|++..
T Consensus 162 ~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 162 PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEEe
Confidence 34568888889999999998765
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00016 Score=65.16 Aligned_cols=19 Identities=11% Similarity=0.139 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..|+.+.
T Consensus 59 ~~~vLdiG~G~G~~~~~la 77 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMA 77 (221)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999999999874
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0043 Score=58.12 Aligned_cols=99 Identities=9% Similarity=-0.068 Sum_probs=59.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--C-Cc-cceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--P-SR-KYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~-~~-~~f~~g 138 (373)
.-+|+|+|||+|..|+.+.... +. +|+-.|+...-....=+++. . .+ --|..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~----------------------~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYG----------------------KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT----------------------CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecccCCHHHHHHHHhC----------------------CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4689999999999998873211 11 57777775432222211111 1 11 225555
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
.. ..+.+++++|++++.. |.. ...||..-.+-|+
T Consensus 183 D~----~~~~~~~~fD~Vi~~~--------p~~----------------------------------~~~~l~~~~~~Lk 216 (278)
T 2frn_A 183 DN----RDFPGENIADRILMGY--------VVR----------------------------------THEFIPKALSIAK 216 (278)
T ss_dssp CT----TTCCCCSCEEEEEECC--------CSS----------------------------------GGGGHHHHHHHEE
T ss_pred CH----HHhcccCCccEEEECC--------chh----------------------------------HHHHHHHHHHHCC
Confidence 54 2333478999998842 211 0136666667899
Q ss_pred cCCeEEEEeccC
Q 017363 219 PGGLIVFVLFSL 230 (373)
Q Consensus 219 pGG~lvl~~~g~ 230 (373)
|||++++...+.
T Consensus 217 pgG~l~~~~~~~ 228 (278)
T 2frn_A 217 DGAIIHYHNTVP 228 (278)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCeEEEEEEeec
Confidence 999999987764
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0029 Score=68.48 Aligned_cols=108 Identities=10% Similarity=0.035 Sum_probs=65.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----C----C-Cc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----P----P-SR 132 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~----~-~~ 132 (373)
...+|+|+|||+|..++.+.... .+..+|+--|+-..--...-+.+ . . .+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g---------------------~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYP---------------------TSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSC---------------------CCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC---------------------CCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 35799999999999988772110 11225666665432211111100 0 0 11
Q ss_pred cceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHH
Q 017363 133 KYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNA 212 (373)
Q Consensus 133 ~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 212 (373)
--|..|. ...--++.+++|+|+++.++||+... +...||+.
T Consensus 780 VefiqGD---a~dLp~~d~sFDlVV~~eVLeHL~dp------------------------------------~l~~~L~e 820 (950)
T 3htx_A 780 ATLYDGS---ILEFDSRLHDVDIGTCLEVIEHMEED------------------------------------QACEFGEK 820 (950)
T ss_dssp EEEEESC---TTSCCTTSCSCCEEEEESCGGGSCHH------------------------------------HHHHHHHH
T ss_pred eEEEECc---hHhCCcccCCeeEEEEeCchhhCChH------------------------------------HHHHHHHH
Confidence 1233332 23334567999999999999997631 23357888
Q ss_pred HHhhhccCCeEEEEeccC
Q 017363 213 RAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 213 Ra~EL~pGG~lvl~~~g~ 230 (373)
-.+-|+|| .+++..+..
T Consensus 821 I~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 821 VLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHTTCCS-EEEEEECBG
T ss_pred HHHHcCCC-EEEEEecCc
Confidence 88999999 888777654
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00083 Score=56.85 Aligned_cols=19 Identities=16% Similarity=-0.013 Sum_probs=16.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999988774
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0047 Score=62.19 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
...+|+|+|||+|..++.+..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~ 262 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAAL 262 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH
Confidence 457999999999999998754
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0008 Score=61.60 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=60.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcC--------CC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTM--------PP 130 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l--------~~ 130 (373)
+.-+|+|+|||+|..++.+.... |...|+-.|....--... ++.. .-
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~----------------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 106 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF----------------------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF 106 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS----------------------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC----------------------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC
Confidence 45799999999999998774321 122455555432111100 0000 00
Q ss_pred CccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHH
Q 017363 131 SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFL 210 (373)
Q Consensus 131 ~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL 210 (373)
.+--|+.+..-.+....++.+++|.++....=-|.... . .+.++. ...||
T Consensus 107 ~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~----~-------~~~r~~-------------------~~~~l 156 (246)
T 2vdv_E 107 QNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQR----K-------HKARII-------------------TNTLL 156 (246)
T ss_dssp TTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSCC-------------------CHHHH
T ss_pred CcEEEEeccHHHHHHHhccccccCEEEEECCCcccccc----h-------hHHhhc-------------------cHHHH
Confidence 11234444443444556788999999855433332110 0 000110 02578
Q ss_pred HHHHhhhccCCeEEEEe
Q 017363 211 NARAHELVPGGLIVFVL 227 (373)
Q Consensus 211 ~~Ra~EL~pGG~lvl~~ 227 (373)
+.-++-|+|||+|++.+
T Consensus 157 ~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 157 SEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEe
Confidence 88888999999999954
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00089 Score=60.82 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhhccCCeEEEEec
Q 017363 206 TEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+..||+.-.+-|+|||+|++...
T Consensus 155 ~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 155 SKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECT
T ss_pred HHHHHHHHHHhcCCCeEEEEeeC
Confidence 34578888899999999988543
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0018 Score=55.54 Aligned_cols=18 Identities=17% Similarity=0.034 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
.-+|+|+|||+|..++.+
T Consensus 32 ~~~vLDlGcG~G~~~~~l 49 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEA 49 (177)
T ss_dssp SCEEEEETCTTCHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHH
Confidence 468999999999999876
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00011 Score=65.96 Aligned_cols=19 Identities=21% Similarity=0.162 Sum_probs=16.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..+..+.
T Consensus 81 ~~~VLdiG~G~G~~~~~la 99 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMA 99 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999999888774
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00067 Score=63.17 Aligned_cols=98 Identities=11% Similarity=0.054 Sum_probs=57.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CC-Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PP-SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~-~~~~f~~g 138 (373)
..+|+|+|||+|..++.+.+.+ . |..+++..|....-....-+.+ .- .+--+..
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~--------~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~- 170 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAV--------G-------------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV- 170 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHT--------T-------------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC-
T ss_pred CCEEEEECCcCCHHHHHHHHHh--------C-------------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE-
Confidence 4699999999999988774332 1 1226777776432222111111 10 1112333
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+.+.+. +|++++|++++.. |.. ..+|+.-.+-|+
T Consensus 171 --~d~~~~-~~~~~~D~V~~~~--------~~~-----------------------------------~~~l~~~~~~L~ 204 (277)
T 1o54_A 171 --RDISEG-FDEKDVDALFLDV--------PDP-----------------------------------WNYIDKCWEALK 204 (277)
T ss_dssp --CCGGGC-CSCCSEEEEEECC--------SCG-----------------------------------GGTHHHHHHHEE
T ss_pred --CCHHHc-ccCCccCEEEECC--------cCH-----------------------------------HHHHHHHHHHcC
Confidence 333333 7778999999831 210 135666677899
Q ss_pred cCCeEEEEec
Q 017363 219 PGGLIVFVLF 228 (373)
Q Consensus 219 pGG~lvl~~~ 228 (373)
|||++++...
T Consensus 205 pgG~l~~~~~ 214 (277)
T 1o54_A 205 GGGRFATVCP 214 (277)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEEeC
Confidence 9999999874
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00047 Score=66.17 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=64.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCC--------CCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMP--------PSR 132 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~--------~~~ 132 (373)
++.+|+|+|||+|..+..+... .+..++..-|+-..-. .+.+ .++ ..+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~~~~~~ 133 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKH----------------------PTVEKAVMVDIDGELV-EVAKRHMPEWHQGAFDDPR 133 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS----------------------TTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTT
T ss_pred CCCeEEEEcCCcCHHHHHHHhc----------------------CCCCEEEEEECCHHHH-HHHHHHhHhhccccccCCc
Confidence 4579999999999998877321 1112555555542111 1111 111 112
Q ss_pred cceeeccCcccccCCCCCCcceEEEccCcccc-cccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHH
Q 017363 133 KYFAFGVPGSFHGRLFPKSSLHFANSSSSLNW-LSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLN 211 (373)
Q Consensus 133 ~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHW-LS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~ 211 (373)
--+..+....|-.+ +++++|++++....|| ++..+..+ ....|++
T Consensus 134 v~~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~~~~~~l--------------------------------~~~~~l~ 179 (314)
T 1uir_A 134 AVLVIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARLL--------------------------------YTVEFYR 179 (314)
T ss_dssp EEEEESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGGG--------------------------------SSHHHHH
T ss_pred eEEEEchHHHHHHh--cCCCccEEEECCCCcccccCcchhc--------------------------------cHHHHHH
Confidence 23444444333222 4688999999988888 32222111 1136888
Q ss_pred HHHhhhccCCeEEEEecc
Q 017363 212 ARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 212 ~Ra~EL~pGG~lvl~~~g 229 (373)
.-.+-|+|||+|++....
T Consensus 180 ~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 180 LVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHHHTEEEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEccC
Confidence 888999999999998654
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=63.42 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=58.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-------CCCccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-------PPSRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-------~~~~~~ 134 (373)
++.+|+|+|||+|..+..+... .+..+|...|+-..-....=+.+ ...+--
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~ 152 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRH----------------------GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRAT 152 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTC----------------------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhC----------------------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEE
Confidence 4579999999999998877311 11125555565421111110111 111222
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+..+....|-.+ .+++++|++++....++.. +..+. -..||+.-.
T Consensus 153 ~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~~~--~~~l~--------------------------------~~~~l~~~~ 197 (304)
T 3bwc_A 153 VRVGDGLAFVRQ-TPDNTYDVVIIDTTDPAGP--ASKLF--------------------------------GEAFYKDVL 197 (304)
T ss_dssp EEESCHHHHHHS-SCTTCEEEEEEECC-----------C--------------------------------CHHHHHHHH
T ss_pred EEECcHHHHHHh-ccCCceeEEEECCCCcccc--chhhh--------------------------------HHHHHHHHH
Confidence 334433222111 1578999999987766521 10100 036888888
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||+|++...
T Consensus 198 ~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 198 RILKPDGICCNQGE 211 (304)
T ss_dssp HHEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEecC
Confidence 99999999999853
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00056 Score=64.29 Aligned_cols=45 Identities=9% Similarity=0.066 Sum_probs=33.6
Q ss_pred CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc---c--CCeE
Q 017363 149 PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV---P--GGLI 223 (373)
Q Consensus 149 P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~---p--GG~l 223 (373)
+++++|+|+++.++++.. +...+|+.-.+-|+ | ||++
T Consensus 160 ~~~~fD~Ii~~dvl~~~~--------------------------------------~~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFHQ--------------------------------------AHDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp SCSSBSEEEEESCCSCGG--------------------------------------GHHHHHHHHHHHBCCTTTCTTCEE
T ss_pred cCCCCCEEEEeCcccChH--------------------------------------HHHHHHHHHHHHhcccCCCCCCEE
Confidence 568899999999998843 33356777778899 9 9999
Q ss_pred EEEeccCC
Q 017363 224 VFVLFSLP 231 (373)
Q Consensus 224 vl~~~g~~ 231 (373)
++.+..+.
T Consensus 202 ~v~~~~~~ 209 (281)
T 3bzb_A 202 LVTFTHHR 209 (281)
T ss_dssp EEEECC--
T ss_pred EEEEEeee
Confidence 88776543
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0016 Score=57.81 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=19.9
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.....|+.-.+-|+|||+|++..+.
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3456777777899999999988774
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00048 Score=66.04 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|..+.+
T Consensus 83 g~~VLDlGcG~G~~s~~la~ 102 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGG 102 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHT
T ss_pred CCEEEEEcCCCCHHHHHHHh
Confidence 47999999999999987743
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00042 Score=63.10 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=58.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~~~~~f~~ 137 (373)
...+|+|+|||+|..++.+...+ . |..+++..|....-....-+.+ ...+--|..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~--------~-------------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~ 154 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV--------G-------------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL 154 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------C-------------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHh--------C-------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34699999999999998774432 0 1125667676432221111111 111112333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ ++.+.-+|++++|++++. | | |...+|+.-.+-|
T Consensus 155 ~---d~~~~~~~~~~~D~v~~~----~----~-----------------------------------~~~~~l~~~~~~L 188 (258)
T 2pwy_A 155 G---KLEEAELEEAAYDGVALD----L----M-----------------------------------EPWKVLEKAALAL 188 (258)
T ss_dssp S---CGGGCCCCTTCEEEEEEE----S----S-----------------------------------CGGGGHHHHHHHE
T ss_pred C---chhhcCCCCCCcCEEEEC----C----c-----------------------------------CHHHHHHHHHHhC
Confidence 3 333323677899999972 2 2 1114667777889
Q ss_pred ccCCeEEEEecc
Q 017363 218 VPGGLIVFVLFS 229 (373)
Q Consensus 218 ~pGG~lvl~~~g 229 (373)
+|||++++....
T Consensus 189 ~~gG~l~~~~~~ 200 (258)
T 2pwy_A 189 KPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEEEEEESC
T ss_pred CCCCEEEEEeCC
Confidence 999999998753
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00035 Score=64.37 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=60.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCCC-ccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPPS-RKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~~-~~~f~~g 138 (373)
..+|+|+|||+|..|+.+...+ ++..+|+.-|+...-.... ++...-. +--|..+
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~---------------------~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 122 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMAREL---------------------PADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG 122 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTS---------------------CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCEEEEecCCchHHHHHHHHhC---------------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 5799999999999998773221 1123677777643221111 1111111 2234444
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
....+...+...+++|++++... .. +...+|+.-.+-|+
T Consensus 123 d~~~~l~~~~~~~~fD~V~~d~~---~~--------------------------------------~~~~~l~~~~~~Lk 161 (248)
T 3tfw_A 123 PALQSLESLGECPAFDLIFIDAD---KP--------------------------------------NNPHYLRWALRYSR 161 (248)
T ss_dssp CHHHHHHTCCSCCCCSEEEECSC---GG--------------------------------------GHHHHHHHHHHTCC
T ss_pred CHHHHHHhcCCCCCeEEEEECCc---hH--------------------------------------HHHHHHHHHHHhcC
Confidence 43333333333468999998542 11 22346777778999
Q ss_pred cCCeEEEEec
Q 017363 219 PGGLIVFVLF 228 (373)
Q Consensus 219 pGG~lvl~~~ 228 (373)
|||++++...
T Consensus 162 pGG~lv~~~~ 171 (248)
T 3tfw_A 162 PGTLIIGDNV 171 (248)
T ss_dssp TTCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 9999998654
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0024 Score=60.98 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=60.0
Q ss_pred CceEEeeecCCCCccc----HHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccce-e
Q 017363 62 GTFKLADFGCSVGPNT----FIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYF-A 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS----~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f-~ 136 (373)
...+|+|+|||+|.+. ..+ .+.. ++.-+|+-.|+-.. ++ +--| +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~--------a~~~-------------~~~~~V~gvDis~~--------v~--~v~~~i 111 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVL--------RQWL-------------PTGTLLVDSDLNDF--------VS--DADSTL 111 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHH--------HHHS-------------CTTCEEEEEESSCC--------BC--SSSEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHH--------HHHc-------------CCCCEEEEEECCCC--------CC--CCEEEE
Confidence 3568999999885553 221 1111 11237888888654 21 2234 4
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.|.. .+ +.+++++|+|+|+.+.+|.-... .+. . . . ...+..+|+.-.+-
T Consensus 112 ~gD~---~~-~~~~~~fD~Vvsn~~~~~~g~~~---~d~--~---~-~------------------~~l~~~~l~~a~r~ 160 (290)
T 2xyq_A 112 IGDC---AT-VHTANKWDLIISDMYDPRTKHVT---KEN--D---S-K------------------EGFFTYLCGFIKQK 160 (290)
T ss_dssp ESCG---GG-CCCSSCEEEEEECCCCCC---CC---SCC--C---C-C------------------CTHHHHHHHHHHHH
T ss_pred ECcc---cc-CCccCcccEEEEcCCcccccccc---ccc--c---c-h------------------HHHHHHHHHHHHHh
Confidence 4443 22 22347899999987665521110 000 0 0 0 11345678888899
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||+|++..+.
T Consensus 161 LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 161 LALGGSIAVKITE 173 (290)
T ss_dssp EEEEEEEEEEECS
T ss_pred cCCCcEEEEEEec
Confidence 9999999997654
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00018 Score=65.53 Aligned_cols=102 Identities=18% Similarity=0.138 Sum_probs=59.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH---hhcCCC--Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL---FQTMPP--SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l---f~~l~~--~~~~f~~ 137 (373)
.-+|+|+|||+|..|+.+...+ ++.-+|+..|+...-.... ++...- .+--|..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~---------------------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGL---------------------ADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHS---------------------CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhC---------------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 4589999999999999874322 1122677777754321111 111111 1223444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
|....+... ++++++|++|+.... .++..||+.-.+-|
T Consensus 116 gda~~~l~~-~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~L 153 (221)
T 3dr5_A 116 SRPLDVMSR-LANDSYQLVFGQVSP-----------------------------------------MDLKALVDAAWPLL 153 (221)
T ss_dssp SCHHHHGGG-SCTTCEEEEEECCCT-----------------------------------------TTHHHHHHHHHHHE
T ss_pred cCHHHHHHH-hcCCCcCeEEEcCcH-----------------------------------------HHHHHHHHHHHHHc
Confidence 443222222 246899999875311 12335677777899
Q ss_pred ccCCeEEEEe
Q 017363 218 VPGGLIVFVL 227 (373)
Q Consensus 218 ~pGG~lvl~~ 227 (373)
+|||++++..
T Consensus 154 kpGG~lv~dn 163 (221)
T 3dr5_A 154 RRGGALVLAD 163 (221)
T ss_dssp EEEEEEEETT
T ss_pred CCCcEEEEeC
Confidence 9999999844
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00084 Score=60.13 Aligned_cols=20 Identities=25% Similarity=0.130 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|..+..
T Consensus 78 ~~~vLDiG~G~G~~~~~la~ 97 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFAR 97 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHHH
Confidence 46999999999999987743
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00083 Score=63.53 Aligned_cols=20 Identities=25% Similarity=0.459 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
...+|+|+|||+|..|..+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la 101 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA 101 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEeccCCCHHHHHHH
Confidence 35799999999999988773
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0015 Score=59.65 Aligned_cols=21 Identities=10% Similarity=-0.138 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
...+|+|+|||+|..++.+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~ 85 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA 85 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHH
Confidence 356999999999999987743
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=59.50 Aligned_cols=20 Identities=20% Similarity=0.160 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..|..+..
T Consensus 85 ~~~VLdiG~G~G~~~~~la~ 104 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYR 104 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHH
Confidence 46999999999999987744
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0028 Score=58.04 Aligned_cols=19 Identities=11% Similarity=0.074 Sum_probs=16.7
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017363 64 FKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~ 82 (373)
-+|+|+|||+|..|+.+..
T Consensus 83 ~~VLDiG~GtG~~t~~la~ 101 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRD 101 (236)
T ss_dssp SEEEEECCTTSHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHH
Confidence 5999999999999998744
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0009 Score=62.86 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
...+|+|+|||+|..|..+.+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~ 94 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAAS 94 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHT
T ss_pred CCCEEEEeCcCCCHHHHHHHH
Confidence 347999999999999887733
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00049 Score=62.20 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=19.1
Q ss_pred cHHHHHHHHHhhhccCCeEEEEec
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
++..+|+.-.+-|+|||++++...
T Consensus 138 ~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 138 QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 344678888899999999999743
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0007 Score=64.06 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=68.0
Q ss_pred CceEEeeecCCCCcccHHHH--------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc
Q 017363 62 GTFKLADFGCSVGPNTFIAV--------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT 127 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~--------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~ 127 (373)
.+-+|+|+|||.|+.|+.++ ...++.+++.....+ ..+.+-+-|++..+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----------~~~~~~v~D~~~~~------- 194 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----------VPHRTNVADLLEDR------- 194 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----------CCEEEEECCTTTSC-------
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----------CCceEEEeeecccC-------
Confidence 47799999999999999885 445555555544321 22456666665322
Q ss_pred CCCCccceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeec-------CCCHHHHHHHHH
Q 017363 128 MPPSRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICS-------GLVKGVSEAYSA 200 (373)
Q Consensus 128 l~~~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~-------~~~~~~~~ay~~ 200 (373)
|+...|++.++=++|-|.+-..+..=+.-.++|-|.|.++ +.++...+-|.+
T Consensus 195 ---------------------p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~ 253 (281)
T 3lcv_B 195 ---------------------LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQ 253 (281)
T ss_dssp ---------------------CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHH
T ss_pred ---------------------CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHH
Confidence 6788999999999999975544321122235666677654 356677777877
Q ss_pred HHhhcH
Q 017363 201 QFKNDT 206 (373)
Q Consensus 201 Q~~~D~ 206 (373)
+|+++.
T Consensus 254 ~~e~~~ 259 (281)
T 3lcv_B 254 SFESQA 259 (281)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0023 Score=60.15 Aligned_cols=108 Identities=10% Similarity=-0.011 Sum_probs=60.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh--------cCCCCcc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ--------TMPPSRK 133 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~--------~l~~~~~ 133 (373)
++.+|+|+|||+|..+..++.. .+.-+|..-|+-..- -.+.+ .+...+-
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vEid~~~-v~~ar~~~~~~~~~~~~~rv 131 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH----------------------PSVKKATLVDIDGKV-IEYSKKFLPSIAGKLDDPRV 131 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC----------------------TTCSEEEEEESCHHH-HHHHHHHCHHHHTTTTSTTE
T ss_pred CCCEEEEECCchHHHHHHHHhC----------------------CCCceEEEEECCHHH-HHHHHHHhHhhccccCCCce
Confidence 4679999999999988876311 011144444543211 11111 0111122
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-+..+....|-.. +++++|++++....+|.. |..+. . ..|++.-
T Consensus 132 ~v~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~--~~~l~-------~-------------------------~~~~~~~ 175 (275)
T 1iy9_A 132 DVQVDDGFMHIAK--SENQYDVIMVDSTEPVGP--AVNLF-------T-------------------------KGFYAGI 175 (275)
T ss_dssp EEEESCSHHHHHT--CCSCEEEEEESCSSCCSC--CCCCS-------T-------------------------THHHHHH
T ss_pred EEEECcHHHHHhh--CCCCeeEEEECCCCCCCc--chhhh-------H-------------------------HHHHHHH
Confidence 3444444333222 357899999987766621 11110 0 1577777
Q ss_pred HhhhccCCeEEEEec
Q 017363 214 AHELVPGGLIVFVLF 228 (373)
Q Consensus 214 a~EL~pGG~lvl~~~ 228 (373)
.+-|+|||+|++...
T Consensus 176 ~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 176 AKALKEDGIFVAQTD 190 (275)
T ss_dssp HHHEEEEEEEEEECC
T ss_pred HHhcCCCcEEEEEcC
Confidence 899999999999853
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.002 Score=61.72 Aligned_cols=124 Identities=13% Similarity=0.031 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
..+|+|+|||+|..|+.+.+.. . +.-+|+-.|....-...+-+.+. -.+-.+..+.
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~--------~-------------~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D 177 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLM--------R-------------NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS 177 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHT--------T-------------TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--------C-------------CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 4689999999999999874332 1 11267777765433222222221 1112233333
Q ss_pred CcccccCCCCCCcceEEEcc---CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANSS---SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss---~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
...+- .+++++|.|++. +.+.-+.+.|.... . -.++.. ....+....+|+.-++-
T Consensus 178 ~~~~~---~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~--------------~-~~~~~~----~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 178 SLHIG---ELNVEFDKILLDAPCTGSGTIHKNPERKW--------------N-RTMDDI----KFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp GGGGG---GGCCCEEEEEEECCTTSTTTCC-----------------------CCHHHH----HHHHHHHHHHHHHHHHH
T ss_pred hhhcc---cccccCCEEEEeCCCCCcccccCChhHhh--------------c-CCHHHH----HHHHHHHHHHHHHHHHh
Confidence 32221 135689999973 22322223332211 0 011111 12233446789998999
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||+|+++...
T Consensus 236 LkpGG~lv~stcs 248 (315)
T 1ixk_A 236 LKPGGILVYSTCS 248 (315)
T ss_dssp EEEEEEEEEEESC
T ss_pred CCCCCEEEEEeCC
Confidence 9999999997754
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0011 Score=63.15 Aligned_cols=110 Identities=12% Similarity=0.024 Sum_probs=57.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-------CCCccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-------PPSRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-------~~~~~~ 134 (373)
++.+|+|+|||+|..+..+... .+..+|..-|+-..-....=+.+ ...+--
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~ 147 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKH----------------------DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAE 147 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTS----------------------TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhc----------------------CCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceE
Confidence 3479999999999998877321 01125555555321111000011 111222
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+..+....|-.. +++++|++++...-+|... +..+ ....||+.-+
T Consensus 148 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~-~~~l--------------------------------~~~~~l~~~~ 192 (296)
T 1inl_A 148 IVIANGAEYVRK--FKNEFDVIIIDSTDPTAGQ-GGHL--------------------------------FTEEFYQACY 192 (296)
T ss_dssp EEESCHHHHGGG--CSSCEEEEEEEC-----------C--------------------------------CSHHHHHHHH
T ss_pred EEECcHHHHHhh--CCCCceEEEEcCCCcccCc-hhhh--------------------------------hHHHHHHHHH
Confidence 344443333222 3578999998766565431 1000 1236788888
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||+|++...
T Consensus 193 ~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 193 DALKEDGVFSAETE 206 (296)
T ss_dssp HHEEEEEEEEEECC
T ss_pred HhcCCCcEEEEEcc
Confidence 99999999999753
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.001 Score=62.25 Aligned_cols=72 Identities=15% Similarity=0.200 Sum_probs=51.4
Q ss_pred CceEEeeecCCCCcccHHHH-----------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC
Q 017363 62 GTFKLADFGCSVGPNTFIAV-----------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP 130 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~-----------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~ 130 (373)
.+-+|+|+|||.|+.++..+ ...|+.+++..... .+++.+...|++.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~----------g~~~~~~v~D~~~------------ 162 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREK----------DWDFTFALQDVLC------------ 162 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHT----------TCEEEEEECCTTT------------
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhc----------CCCceEEEeeccc------------
Confidence 46799999999999999875 44555555554332 2345666666653
Q ss_pred CccceeeccCcccccCCCCCCcceEEEccCcccccccchhh
Q 017363 131 SRKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKE 171 (373)
Q Consensus 131 ~~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~ 171 (373)
.. |+.+.|++.++=++|-|.+-..+
T Consensus 163 ---------------~~-~~~~~DvvLllk~lh~LE~q~~~ 187 (253)
T 3frh_A 163 ---------------AP-PAEAGDLALIFKLLPLLEREQAG 187 (253)
T ss_dssp ---------------SC-CCCBCSEEEEESCHHHHHHHSTT
T ss_pred ---------------CC-CCCCcchHHHHHHHHHhhhhchh
Confidence 22 55699999999999999766544
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00053 Score=62.40 Aligned_cols=21 Identities=10% Similarity=0.216 Sum_probs=17.6
Q ss_pred ceEEeeecCCCCcccHHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQN 83 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ 83 (373)
..+|+|+|||+|..|+.+...
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~ 81 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASA 81 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHh
Confidence 468999999999999987543
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.008 Score=60.40 Aligned_cols=127 Identities=10% Similarity=0.042 Sum_probs=69.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
..+|+|+|||+|..|..+.... .. .-+|+.+|....-...+=+.+ .-.+-.+..+.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~--------~~-------------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D 318 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELM--------KN-------------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKD 318 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------TT-------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------CC-------------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcC
Confidence 4689999999999999874332 10 126777777643322222221 11122233343
Q ss_pred CcccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
...+- .-++++++|.|++ ++.+.-+.+.|...... ++..+ + ...+.-..+|+.-++-
T Consensus 319 ~~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~--------------~~~~~-~----~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 319 ARKAP-EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRL--------------REDKI-N----EMSQLQRELLESAARL 378 (450)
T ss_dssp TTCCS-SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHC--------------CTTSH-H----HHHHHHHHHHHHHHTT
T ss_pred hhhcc-hhhccCCCCEEEEcCCCCCCeeeccChhhhhhC--------------CHHHH-H----HHHHHHHHHHHHHHHh
Confidence 32221 1155678999996 44454445555432210 01111 0 1111225688888899
Q ss_pred hccCCeEEEEeccC
Q 017363 217 LVPGGLIVFVLFSL 230 (373)
Q Consensus 217 L~pGG~lvl~~~g~ 230 (373)
|+|||+|+.+....
T Consensus 379 LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 379 VKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEeCCC
Confidence 99999999887654
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00046 Score=61.76 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..|+.+.
T Consensus 59 ~~~vLdiG~G~G~~~~~la 77 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLA 77 (223)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHH
Confidence 4799999999999998873
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.011 Score=53.32 Aligned_cols=20 Identities=15% Similarity=0.302 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
..+|+|+|||+|..++.+..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~ 111 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSE 111 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCccHHHHHHHH
Confidence 46999999999999887743
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0033 Score=60.85 Aligned_cols=113 Identities=12% Similarity=-0.017 Sum_probs=61.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC---Cccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP---SRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~---~~~~f~~g 138 (373)
...+|+|+|||+|..++.+.... . +...++-.|.-..--...=+++.. ..--|..+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~--------~-------------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL--------G-------------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA 261 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH--------C-------------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh--------C-------------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 34689999999999988774332 0 112455555532211111111100 01122222
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
. +.+-..|..++|+++++-..+|.... .. +.......+++.-.+-|+
T Consensus 262 D---~~~~~~~~~~~D~Ii~npPyg~r~~~----------------------~~--------~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 262 D---ARHLPRFFPEVDRILANPPHGLRLGR----------------------KE--------GLFHLYWDFLRGALALLP 308 (354)
T ss_dssp C---GGGGGGTCCCCSEEEECCCSCC--------------------------CH--------HHHHHHHHHHHHHHHTSC
T ss_pred C---hhhCccccCCCCEEEECCCCcCccCC----------------------cc--------cHHHHHHHHHHHHHHhcC
Confidence 2 22323455668999997666552110 01 122344578888889999
Q ss_pred cCCeEEEEec
Q 017363 219 PGGLIVFVLF 228 (373)
Q Consensus 219 pGG~lvl~~~ 228 (373)
|||++++.+.
T Consensus 309 pgG~l~i~t~ 318 (354)
T 3tma_A 309 PGGRVALLTL 318 (354)
T ss_dssp TTCEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999865
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0017 Score=61.21 Aligned_cols=22 Identities=23% Similarity=0.075 Sum_probs=18.4
Q ss_pred HHHHHHHhhhccCCeEEEEecc
Q 017363 208 AFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.|++.-++-|+|||+|++....
T Consensus 174 ~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 174 EFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCC
Confidence 6788888999999999998643
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0025 Score=63.58 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=74.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|..|..+.+.. . ..+|+.+|....-...+-+.+.. .+..+..+..
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~--------~--------------~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~ 304 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVA--------P--------------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHC--------T--------------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT
T ss_pred cCeEEEECCCchHHHHHHHHHc--------C--------------CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch
Confidence 4689999999999999874321 1 12788888876554444333211 1122334433
Q ss_pred cccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 141 GSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
..+- ..++++++|.|++ ++.+..+.+.|...... ++..+ . ...+....+|+.-.+-|
T Consensus 305 ~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~--------------~~~~~-~----~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 305 RYPS-QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR--------------RDRDI-P----ELAQLQSEILDAIWPHL 364 (429)
T ss_dssp TCTH-HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHC--------------CTTHH-H----HHHHHHHHHHHHHGGGE
T ss_pred hhch-hhcccCCCCEEEEeCCCCcccccCCCcchhhcC--------------CHHHH-H----HHHHHHHHHHHHHHHhc
Confidence 2211 1146688999997 45566666666432210 11111 1 12223457888888999
Q ss_pred ccCCeEEEEeccC
Q 017363 218 VPGGLIVFVLFSL 230 (373)
Q Consensus 218 ~pGG~lvl~~~g~ 230 (373)
+|||+|+++....
T Consensus 365 kpGG~lvystcs~ 377 (429)
T 1sqg_A 365 KTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEEEEEESCC
T ss_pred CCCCEEEEEECCC
Confidence 9999999988654
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.00057 Score=62.97 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=60.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCch---hhHhhcCCCC-ccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDF---NTLFQTMPPS-RKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDF---n~lf~~l~~~-~~~f~~g 138 (373)
..+|+|+|||+|..|+.+...+ ++..+|+.-|+-..-. ...++...-. +--|..|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~---------------------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLAL---------------------PDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTS---------------------CTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred cCEEEEeeCCcCHHHHHHHHhC---------------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 4699999999999999873321 1123677777654321 1122222211 2234444
Q ss_pred cCcccccCCCC---CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 139 VPGSFHGRLFP---KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 139 vpgSFy~rlfP---~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
....+...+.+ ++++|++|+... . .+...+|+.-.+
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~---~--------------------------------------~~~~~~l~~~~~ 158 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDAD---K--------------------------------------TNYLNYYELALK 158 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESC---G--------------------------------------GGHHHHHHHHHH
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCC---h--------------------------------------HHhHHHHHHHHH
Confidence 43222111111 478999987532 0 133457777788
Q ss_pred hhccCCeEEEEecc
Q 017363 216 ELVPGGLIVFVLFS 229 (373)
Q Consensus 216 EL~pGG~lvl~~~g 229 (373)
-|+|||+|++...-
T Consensus 159 ~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 159 LVTPKGLIAIDNIF 172 (242)
T ss_dssp HEEEEEEEEEECSS
T ss_pred hcCCCeEEEEECCc
Confidence 99999999997554
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0025 Score=61.84 Aligned_cols=109 Identities=19% Similarity=0.096 Sum_probs=61.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC-------CCccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP-------PSRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~-------~~~~~ 134 (373)
++.+|+|+|||+|..++.+... .+..+|...|+-..-....=+.++ ..+--
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~----------------------~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~ 177 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARH----------------------ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVN 177 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTC----------------------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEE
T ss_pred CCCEEEEECCCccHHHHHHHHc----------------------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 4579999999999988877311 112256666654321111111111 11223
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+..+....|-.. ++++++|++++....+|- .+..+ ....||+.-.
T Consensus 178 ~~~~D~~~~l~~-~~~~~fDlIi~d~~~p~~--~~~~l--------------------------------~~~~~l~~~~ 222 (334)
T 1xj5_A 178 LVIGDGVAFLKN-AAEGSYDAVIVDSSDPIG--PAKEL--------------------------------FEKPFFQSVA 222 (334)
T ss_dssp EEESCHHHHHHT-SCTTCEEEEEECCCCTTS--GGGGG--------------------------------GSHHHHHHHH
T ss_pred EEECCHHHHHHh-ccCCCccEEEECCCCccC--cchhh--------------------------------hHHHHHHHHH
Confidence 444444333211 356789999997664441 11111 1236888888
Q ss_pred hhhccCCeEEEEe
Q 017363 215 HELVPGGLIVFVL 227 (373)
Q Consensus 215 ~EL~pGG~lvl~~ 227 (373)
+-|+|||+|++..
T Consensus 223 ~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 223 RALRPGGVVCTQA 235 (334)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEec
Confidence 9999999999874
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.00077 Score=63.12 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=24.0
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
..++...+|+.-.+-|+|||+|+++....
T Consensus 186 ~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 186 CSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp GGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 34567789999999999999999988654
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.00056 Score=61.17 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=19.1
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+...+|+.-.+-|+|||++++....
T Consensus 152 ~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 152 NTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3445777777899999999986543
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0091 Score=60.73 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=15.4
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
..+|+|+|||+|..++.+
T Consensus 159 ~~~VLDiGcGtG~la~~l 176 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFA 176 (480)
T ss_dssp TCEEEEESCSTTHHHHHH
T ss_pred CCEEEEecCcccHHHHHH
Confidence 469999999999977755
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0037 Score=60.19 Aligned_cols=109 Identities=10% Similarity=-0.053 Sum_probs=60.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-------Cccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-------SRKY 134 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-------~~~~ 134 (373)
++.+|+|+|||+|..++.+... .+..+|..-|+-..-....=+.++. .+--
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~ 173 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKY----------------------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVN 173 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTC----------------------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE
T ss_pred CCCEEEEEcCCccHHHHHHHHc----------------------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 3579999999999998877311 1122566666542211111111111 1222
Q ss_pred eeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 135 FAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 135 f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+..+....|-.. +++++|++++...-+|- .+..+. -..|++.-.
T Consensus 174 ~~~~D~~~~l~~--~~~~fDvIi~d~~~p~~--~~~~l~--------------------------------~~~~l~~~~ 217 (321)
T 2pt6_A 174 VFIEDASKFLEN--VTNTYDVIIVDSSDPIG--PAETLF--------------------------------NQNFYEKIY 217 (321)
T ss_dssp EEESCHHHHHHH--CCSCEEEEEEECCCSSS--GGGGGS--------------------------------SHHHHHHHH
T ss_pred EEEccHHHHHhh--cCCCceEEEECCcCCCC--cchhhh--------------------------------HHHHHHHHH
Confidence 444443332211 35789999997654441 110000 036888888
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||+|++...
T Consensus 218 ~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 218 NALKPNGYCVAQCE 231 (321)
T ss_dssp HHEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEcC
Confidence 99999999999864
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.022 Score=55.74 Aligned_cols=24 Identities=42% Similarity=0.682 Sum_probs=20.8
Q ss_pred HHHHHHHHHhhhccCCeEEEEecc
Q 017363 206 TEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+..||+.-.+-|+|||++++.++.
T Consensus 143 ~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 143 YGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHhCCCCEEEEEECh
Confidence 457888888999999999999875
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0036 Score=59.00 Aligned_cols=109 Identities=11% Similarity=-0.027 Sum_probs=62.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCC-------CCcc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMP-------PSRK 133 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~-------~~~~ 133 (373)
++.+|+|+|||+|..+..+... .+..++...|+-..- -.+.+ .++ ..+-
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~-i~~a~~~~~~~~~~~~~~~v 134 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKY----------------------KSVENIDICEIDETV-IEVSKIYFKNISCGYEDKRV 134 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTC----------------------TTCCEEEEEESCHHH-HHHHHHHCTTTSGGGGSTTE
T ss_pred CCCeEEEEeCCcCHHHHHHHHc----------------------CCCCEEEEEECCHHH-HHHHHHHhHHhccccCCCcE
Confidence 4579999999999998877311 112255555653211 11111 111 1122
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-+..+....|-.. .++++|++++....+|.. +..+. -..|++.-
T Consensus 135 ~~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~--~~~l~--------------------------------~~~~l~~~ 178 (283)
T 2i7c_A 135 NVFIEDASKFLEN--VTNTYDVIIVDSSDPIGP--AETLF--------------------------------NQNFYEKI 178 (283)
T ss_dssp EEEESCHHHHHHH--CCSCEEEEEEECCCTTTG--GGGGS--------------------------------SHHHHHHH
T ss_pred EEEECChHHHHHh--CCCCceEEEEcCCCCCCc--chhhh--------------------------------HHHHHHHH
Confidence 2444444333222 257899999977666521 11110 03688888
Q ss_pred HhhhccCCeEEEEecc
Q 017363 214 AHELVPGGLIVFVLFS 229 (373)
Q Consensus 214 a~EL~pGG~lvl~~~g 229 (373)
.+-|+|||+|++....
T Consensus 179 ~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 179 YNALKPNGYCVAQCES 194 (283)
T ss_dssp HHHEEEEEEEEEECCC
T ss_pred HHhcCCCcEEEEECCC
Confidence 8999999999988543
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0082 Score=58.05 Aligned_cols=28 Identities=14% Similarity=0.056 Sum_probs=23.1
Q ss_pred hcHHHHHHHHHhhhccCCeEEEEeccCC
Q 017363 204 NDTEAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
+|+..+|+.-.+-|+|||++++.+....
T Consensus 249 ~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 249 DHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp HHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 4667899988999999999888887644
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0013 Score=60.79 Aligned_cols=21 Identities=10% Similarity=0.134 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
+.-+|+|+|||+|..|+.+..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~ 99 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATAL 99 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHH
Confidence 346999999999999998743
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0029 Score=60.49 Aligned_cols=109 Identities=13% Similarity=0.032 Sum_probs=59.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCC-------CCcc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMP-------PSRK 133 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~-------~~~~ 133 (373)
++.+|+|+|||+|..++.+... .+..+|..-|+-..- -.+.+ .++ ..+-
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~-i~~ar~~~~~~~~~~~~~rv 151 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKH----------------------PSVESVVQCEIDEDV-IQVSKKFLPGMAIGYSSSKL 151 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTC----------------------TTCCEEEEEESCHHH-HHHHHHHCHHHHGGGGCTTE
T ss_pred CCCEEEEECCCchHHHHHHHHc----------------------CCCCEEEEEECCHHH-HHHHHHHhHHhhcccCCCcE
Confidence 4579999999999999877311 112256666653211 11111 111 1122
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-+..+....|-.. +++++|++++....+|-. +..+ ....|++.-
T Consensus 152 ~v~~~Da~~~l~~--~~~~fD~Ii~d~~~~~~~--~~~l--------------------------------~~~~~l~~~ 195 (304)
T 2o07_A 152 TLHVGDGFEFMKQ--NQDAFDVIITDSSDPMGP--AESL--------------------------------FKESYYQLM 195 (304)
T ss_dssp EEEESCHHHHHHT--CSSCEEEEEEECC---------------------------------------------CHHHHHH
T ss_pred EEEECcHHHHHhh--CCCCceEEEECCCCCCCc--chhh--------------------------------hHHHHHHHH
Confidence 2344443332222 467899999977666521 1000 112588888
Q ss_pred HhhhccCCeEEEEecc
Q 017363 214 AHELVPGGLIVFVLFS 229 (373)
Q Consensus 214 a~EL~pGG~lvl~~~g 229 (373)
.+-|+|||+|++....
T Consensus 196 ~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 196 KTALKEDGVLCCQGEC 211 (304)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HhccCCCeEEEEecCC
Confidence 8999999999998744
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0036 Score=60.18 Aligned_cols=107 Identities=11% Similarity=0.012 Sum_probs=57.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-cCCC-------Ccc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-TMPP-------SRK 133 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-~l~~-------~~~ 133 (373)
++.+|+|+|||+|..++.+... .+..+|...|+-..- -.+.+ .++. .+-
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~----------------------~~~~~v~~vDid~~~-i~~Ar~~~~~~~~~~~~~rv 164 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH----------------------ESVEKVTMCEIDEMV-IDVAKKFLPGMSCGFSHPKL 164 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC----------------------TTCCEEEEECSCHHH-HHHHHHHCTTTSGGGGCTTE
T ss_pred CCCEEEEEcCCcCHHHHHHHHc----------------------CCCCEEEEEECCHHH-HHHHHHHHHHhccccCCCCE
Confidence 3579999999999998877311 112356666664211 11111 1111 112
Q ss_pred ceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH
Q 017363 134 YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR 213 (373)
Q Consensus 134 ~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 213 (373)
-+..+....|-.. +++++|++++...-|| .|.. ..|. ..|++.-
T Consensus 165 ~~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~~------------------------~l~t-------~~~l~~~ 208 (314)
T 2b2c_A 165 DLFCGDGFEFLKN--HKNEFDVIITDSSDPV---GPAE------------------------SLFG-------QSYYELL 208 (314)
T ss_dssp EEECSCHHHHHHH--CTTCEEEEEECCC-----------------------------------------------HHHHH
T ss_pred EEEEChHHHHHHh--cCCCceEEEEcCCCCC---Ccch------------------------hhhH-------HHHHHHH
Confidence 2344443332222 5688999998765444 1100 0000 3688888
Q ss_pred HhhhccCCeEEEEe
Q 017363 214 AHELVPGGLIVFVL 227 (373)
Q Consensus 214 a~EL~pGG~lvl~~ 227 (373)
.+-|+|||+|++..
T Consensus 209 ~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 209 RDALKEDGILSSQG 222 (314)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HhhcCCCeEEEEEC
Confidence 89999999999986
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.011 Score=60.20 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=70.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
..+|+|+|||+|.-|+.+.+.+ . ..-+|+-+|.-..-...+-+++. -.+-.+..+.
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~--------~-------------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D 176 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARM--------N-------------NEGAILANEFSASRVKVLHANISRCGISNVALTHFD 176 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHT--------T-------------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhC--------C-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 4699999999999999874432 1 11267777776443333322221 1122244444
Q ss_pred CcccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+..+-. .+++++|.|++ ++.+.-+.+.|..... -.++... ...+.-..+|+.-++-
T Consensus 177 ~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~~~----~l~~~q~~iL~~a~~~ 235 (479)
T 2frx_A 177 GRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPESNQ----EIAATQRELIDSAFHA 235 (479)
T ss_dssp STTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhHHH----HHHHHHHHHHHHHHHh
Confidence 433211 13578999998 4455544544432110 0122221 1222335688888899
Q ss_pred hccCCeEEEEeccC
Q 017363 217 LVPGGLIVFVLFSL 230 (373)
Q Consensus 217 L~pGG~lvl~~~g~ 230 (373)
|||||+|+.++...
T Consensus 236 LkpGG~LvysTcs~ 249 (479)
T 2frx_A 236 LRPGGTLVYSTCTL 249 (479)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCCEEEEecccC
Confidence 99999999987653
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0015 Score=59.78 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
+.-+|+|+|||+|..|+.+..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~ 90 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTAL 90 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 346999999999999998854
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.032 Score=52.49 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=16.0
Q ss_pred eEEeeecCCCCcccHHHH
Q 017363 64 FKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~ 81 (373)
.+|+|+|||+|..++.+.
T Consensus 125 ~~vLDlG~GsG~~~~~la 142 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVA 142 (284)
T ss_dssp CEEEEESCTTSHHHHHHH
T ss_pred CEEEEEeCchhHHHHHHH
Confidence 589999999999998774
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0098 Score=55.53 Aligned_cols=102 Identities=12% Similarity=0.028 Sum_probs=60.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gv 139 (373)
.-+|+|+|||+|..|+.+.... . ..+|+..|+-..-...+=+++ .-.+..|..+.
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~--------~--------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d 177 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYS--------K--------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILAD 177 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT--------C--------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESC
T ss_pred CCEEEEecCcCCHHHHHHHHhC--------C--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 4689999999999999884321 1 125777776432221111111 11123466666
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
...+ .. .+++|++++.... +...+|..-.+.|+|
T Consensus 178 ~~~~-~~---~~~~D~Vi~d~p~------------------------------------------~~~~~l~~~~~~Lkp 211 (272)
T 3a27_A 178 NRDV-EL---KDVADRVIMGYVH------------------------------------------KTHKFLDKTFEFLKD 211 (272)
T ss_dssp GGGC-CC---TTCEEEEEECCCS------------------------------------------SGGGGHHHHHHHEEE
T ss_pred hHHc-Cc---cCCceEEEECCcc------------------------------------------cHHHHHHHHHHHcCC
Confidence 5444 21 5689999876322 111355555678999
Q ss_pred CCeEEEEeccCCC
Q 017363 220 GGLIVFVLFSLPN 232 (373)
Q Consensus 220 GG~lvl~~~g~~~ 232 (373)
||++++++....+
T Consensus 212 gG~l~~s~~~~~~ 224 (272)
T 3a27_A 212 RGVIHYHETVAEK 224 (272)
T ss_dssp EEEEEEEEEEEGG
T ss_pred CCEEEEEEcCccc
Confidence 9999998876543
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0046 Score=62.80 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=69.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC--CccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP--SRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~--~~~~f~~gvp 140 (373)
..+|+|+|||+|..|+.+.+.. . ..-+|+-+|+-..-...+=+++.. ..-.+..+.+
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~--------~-------------~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da 160 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARM--------G-------------GKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPP 160 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------T-------------TCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCH
T ss_pred CCEEEEEcCCcCHHHHHHHHhC--------C-------------CCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCH
Confidence 4799999999999999884332 1 112677777754433333222210 0122344443
Q ss_pred cccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 141 GSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
..+-. ++++++|.|++ ++.+--+.+.|..... .++. .... ..+....+|+.-++-|
T Consensus 161 ~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~--------------~~~~-~~~~----l~~~Q~~iL~~a~~~L 219 (464)
T 3m6w_A 161 RALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARH--------------WGPS-APKR----MAEVQKALLAQASRLL 219 (464)
T ss_dssp HHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGG--------------CCTT-HHHH----HHHHHHHHHHHHHTTE
T ss_pred HHhhh--hccccCCEEEECCCcCCccccccChHHhhh--------------cCHH-HHHH----HHHHHHHHHHHHHHhc
Confidence 22211 12578999985 3333333444433211 0111 1111 2223467899999999
Q ss_pred ccCCeEEEEeccC
Q 017363 218 VPGGLIVFVLFSL 230 (373)
Q Consensus 218 ~pGG~lvl~~~g~ 230 (373)
+|||+|+.++...
T Consensus 220 kpGG~LvysTCs~ 232 (464)
T 3m6w_A 220 GPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEEEEEESCC
T ss_pred CCCcEEEEEeccC
Confidence 9999999887653
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.011 Score=59.88 Aligned_cols=126 Identities=10% Similarity=0.077 Sum_probs=70.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
..+|+|+|||+|.-|+.+.+.+ .. .-+|+-+|+-..-...+=+++. -.+-.+..+.
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~--------~~-------------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~D 164 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQM--------KG-------------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHA 164 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH--------TT-------------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHc--------CC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 4699999999999999884432 11 1267888876443333322221 1122344444
Q ss_pred CcccccCCCCCCcceEEEc---cCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 140 PGSFHGRLFPKSSLHFANS---SSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~S---s~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
+..+-. ..++++|.|++ ++.+.-+.+.|...... ++ +.. ....+....+|..-++-
T Consensus 165 a~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~--------------~~-~~~----~~l~~~Q~~iL~~a~~~ 223 (456)
T 3m4x_A 165 PAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEW--------------TE-ESP----LYCQKRQQEILSSAIKM 223 (456)
T ss_dssp HHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHHC--------------CT-THH----HHHHHHHHHHHHHHHHT
T ss_pred HHHhhh--hccccCCEEEECCCCCCccccccCHHHhhhc--------------CH-HHH----HHHHHHHHHHHHHHHHh
Confidence 433211 12478999987 33333334444332210 01 111 12223345789988999
Q ss_pred hccCCeEEEEeccC
Q 017363 217 LVPGGLIVFVLFSL 230 (373)
Q Consensus 217 L~pGG~lvl~~~g~ 230 (373)
|+|||+|+.++...
T Consensus 224 LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 224 LKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEEeec
Confidence 99999999887653
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.021 Score=54.98 Aligned_cols=126 Identities=9% Similarity=0.064 Sum_probs=68.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
...+|+|.|||+|..++.+.+.+ .... ....+++-.|+-..-....-..+. ..+.-+..+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~----~~~~-------------~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~- 191 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL----ELKG-------------DVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQ- 191 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH----HTTS-------------SCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES-
T ss_pred CCCEEEeCCCCccHHHHHHHHHH----HHhc-------------CCCceEEEEECCHHHHHHHHHHHHhCCCCceEEEC-
Confidence 46899999999999988775543 1100 012467777774322111111110 001112222
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHH-HHHHHHHhhhc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTE-AFLNARAHELV 218 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~-~FL~~Ra~EL~ 218 (373)
.+.. ..+..++|+++++-.++|..... ....-.+...+|. .|.. .|+..-.+-|+
T Consensus 192 --D~l~-~~~~~~fD~Ii~NPPfg~~~~~~--~~~~~~~~~~~g~-------------------~~~~~~~l~~~~~~Lk 247 (344)
T 2f8l_A 192 --DGLA-NLLVDPVDVVISDLPVGYYPDDE--NAKTFELCREEGH-------------------SFAHFLFIEQGMRYTK 247 (344)
T ss_dssp --CTTS-CCCCCCEEEEEEECCCSEESCHH--HHTTSTTCCSSSC-------------------EEHHHHHHHHHHHTEE
T ss_pred --CCCC-ccccCCccEEEECCCCCCcCchh--hhhhccccCCCCc-------------------chHHHHHHHHHHHHhC
Confidence 2222 23567899999998887754211 1111011111111 1332 58888888999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||+++++++.
T Consensus 248 ~gG~~~~v~p~ 258 (344)
T 2f8l_A 248 PGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEEEEEG
T ss_pred CCCEEEEEECc
Confidence 99999999864
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0019 Score=57.86 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..|+.+.
T Consensus 70 ~~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALA 88 (229)
T ss_dssp CCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH
Confidence 4699999999999998873
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0027 Score=57.63 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhccCCeEEEEecc
Q 017363 206 TEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+..+|+.-.+-|+|||++++....
T Consensus 161 ~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 161 YPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCC
Confidence 345777777899999999996543
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.077 Score=48.59 Aligned_cols=19 Identities=21% Similarity=0.043 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||||..++.+.
T Consensus 16 g~~VlDIGtGsG~l~i~la 34 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELV 34 (225)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHH
Confidence 4799999999999999884
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.056 Score=52.84 Aligned_cols=28 Identities=14% Similarity=0.035 Sum_probs=23.7
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..+++..+|..-.+-|+|||+|+++...
T Consensus 300 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 300 AYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4457778999999999999999988754
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0027 Score=56.27 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=18.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEEec
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+...+|+.-.+-|+|||++++...
T Consensus 138 ~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 138 NGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEESS
T ss_pred hhHHHHHHHHHhcCCCeEEEEECc
Confidence 344678888899999999998543
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.023 Score=49.70 Aligned_cols=75 Identities=12% Similarity=-0.053 Sum_probs=40.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
...+|+|+|||+|..++.+.. . . .-+|+-.|+-..--...=+.++ +--|..+..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~--------~-~--------------~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~- 104 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYL--------L-G--------------AESVTAFDIDPDAIETAKRNCG--GVNFMVADV- 104 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHH--------T-T--------------BSEEEEEESCHHHHHHHHHHCT--TSEEEECCG-
T ss_pred CCCEEEEEeCCccHHHHHHHH--------c-C--------------CCEEEEEECCHHHHHHHHHhcC--CCEEEECcH-
Confidence 356999999999998887621 1 0 0156777764322121111222 222444433
Q ss_pred ccccCCCCCCcceEEEccCccccccc
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSK 167 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~ 167 (373)
.. +| +++|+++++..+||++.
T Consensus 105 --~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 105 --SE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp --GG--CC-CCEEEEEECCCC-----
T ss_pred --HH--CC-CCeeEEEECCCchhccC
Confidence 22 24 78999999999999763
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.024 Score=52.92 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=16.8
Q ss_pred HHHHHHhhhccCCeEEEEe
Q 017363 209 FLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 209 FL~~Ra~EL~pGG~lvl~~ 227 (373)
|++.-.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 7888889999999999874
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.071 Score=49.04 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||||..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLL 40 (230)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHH
Confidence 4799999999999999884
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.072 Score=49.45 Aligned_cols=19 Identities=26% Similarity=0.280 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAV 40 (244)
T ss_dssp SEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHH
Confidence 4799999999999999884
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=95.01 E-value=0.023 Score=53.51 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=17.9
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
..-+|+|+|||+|..|..+.+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 346899999999999998853
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.2 Score=49.40 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=23.3
Q ss_pred HHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 201 QFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 201 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
...+++..++..-.+-|+|||+|++....
T Consensus 300 ~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 300 AMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 34567788999999999999999966544
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.08 Score=51.97 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=21.6
Q ss_pred hcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 204 NDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+++..+++.-.+-|+|||+++++...
T Consensus 308 ~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 308 KDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 45667888888999999999988754
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.064 Score=52.56 Aligned_cols=28 Identities=18% Similarity=-0.022 Sum_probs=23.5
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..+++..+|..-.+-|+|||+|+++...
T Consensus 310 ~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 310 GLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3467888999999999999999888764
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.16 Score=53.36 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=30.7
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHH
Q 017363 25 AKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNI 84 (373)
Q Consensus 25 ~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~i 84 (373)
-+....|+++..++++++. -.. +..+..+|+|+|||+|+.+...+...
T Consensus 332 vKy~~Ye~AI~~Al~d~~~--------~~~----~~~~~~vVldVGaGrGpLv~~al~A~ 379 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDRVP--------EEE----KDTNVQVLMVLGAGRGPLVNASLRAA 379 (637)
T ss_dssp HHHHHHHHHHHHHHHHHSC--------GGG----TTTCEEEEEEESCTTSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhh--------hcc----ccCCCcEEEEECCCCcHHHHHHHHHH
Confidence 3556666666655444322 111 13457899999999999987776554
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.036 Score=57.32 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=17.9
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017363 61 CGTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~ 81 (373)
+++.||+|+|||.|..|..+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la 85 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA 85 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHH
Confidence 357899999999999888773
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.26 Score=42.88 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=43.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC--ccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS--RKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~--~~~f~~gv 139 (373)
...+|+|+|||+|..++.+... + .. +++..|.-..-....-+.+... +--|..+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~------------~----------~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 105 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL------------G----------AK-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGD 105 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------T----------CS-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESC
T ss_pred CcCEEEEeeCCCCHHHHHHHHc------------C----------CC-EEEEEECCHHHHHHHHHHHHHcCCCEEEEECc
Confidence 3468999999999988876321 0 01 5666666432222221122111 12234443
Q ss_pred CcccccCCCCCCcceEEEccCcccccc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLS 166 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS 166 (373)
. .. +| +++|+++++-.+||.+
T Consensus 106 ~---~~--~~-~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 106 V---SE--FN-SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp G---GG--CC-CCCSEEEECCCCSSSS
T ss_pred h---HH--cC-CCCCEEEEcCCCcccc
Confidence 3 22 23 4899999999988865
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=94.09 E-value=0.094 Score=51.43 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=21.5
Q ss_pred hcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 204 NDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 204 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+++..+|..-.+-|+|||.+++++..
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 46667888888999999999987754
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.19 Score=53.39 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=23.7
Q ss_pred hhcHHHHHHHHHhhhccCCeEEEEeccCC
Q 017363 203 KNDTEAFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 203 ~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
.+|...+++.-.+-|+|||+|++++..+.
T Consensus 633 ~~~~~~ll~~a~~~LkpgG~L~~s~~~~~ 661 (703)
T 3v97_A 633 QRDHLALMKDLKRLLRAGGTIMFSNNKRG 661 (703)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCcc
Confidence 45777899999999999999998876543
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=93.90 E-value=0.059 Score=51.00 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
..-+|+|+|||+|..|..+.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT
T ss_pred CcCEEEEEcCcCcHHHHHHH
Confidence 34699999999999999874
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=93.72 E-value=0.37 Score=46.81 Aligned_cols=102 Identities=8% Similarity=-0.082 Sum_probs=58.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gv 139 (373)
..+|+|+| |+|..++.+.. . .+.-+|+.-|+...--...=+.+. -.+--|..+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~--------~--------------~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D 229 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALML--------S--------------GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD 229 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHH--------H--------------TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHH--------h--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh
Confidence 46999999 99999987621 1 011267777774322111111111 0122244443
Q ss_pred CcccccCC--CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 140 PGSFHGRL--FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 140 pgSFy~rl--fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
. ...+ .+++++|+++++..+|+. +...||+.-.+-|
T Consensus 230 ~---~~~l~~~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~L 267 (373)
T 2qm3_A 230 L---RKPLPDYALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATL 267 (373)
T ss_dssp T---TSCCCTTTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTB
T ss_pred h---hhhchhhccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHc
Confidence 3 2212 124689999998655541 1247888888999
Q ss_pred ccCCeE-EEEecc
Q 017363 218 VPGGLI-VFVLFS 229 (373)
Q Consensus 218 ~pGG~l-vl~~~g 229 (373)
+|||++ ++.+..
T Consensus 268 kpgG~~~~~~~~~ 280 (373)
T 2qm3_A 268 KGPRCAGYFGITR 280 (373)
T ss_dssp CSTTCEEEEEECT
T ss_pred ccCCeEEEEEEec
Confidence 999965 555543
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.045 Score=52.14 Aligned_cols=20 Identities=15% Similarity=-0.011 Sum_probs=17.6
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
.-+|+|+|||+|..|..+..
T Consensus 51 ~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHH
T ss_pred cCEEEEECCCchHHHHHHHh
Confidence 46899999999999998864
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=93.49 E-value=0.067 Score=49.73 Aligned_cols=51 Identities=24% Similarity=0.376 Sum_probs=38.0
Q ss_pred ceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhH
Q 017363 63 TFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTL 124 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~l 124 (373)
.-+|+|+|||+|..|..+. ...++.+++++.. .+.++++..|...-||..+
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-----------~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-----------QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-----------CTTEEEEESCTTTCCGGGS
T ss_pred cCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-----------CCCcEEEEcchHhCCHHHh
Confidence 4689999999999999987 4566666665532 2357889999887776554
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=93.15 E-value=0.48 Score=44.71 Aligned_cols=50 Identities=10% Similarity=-0.005 Sum_probs=33.4
Q ss_pred CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhh-cHHHHHHHHHhhhccC-CeEE
Q 017363 147 LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKN-DTEAFLNARAHELVPG-GLIV 224 (373)
Q Consensus 147 lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~-D~~~FL~~Ra~EL~pG-G~lv 224 (373)
-+++..+|++.|-.+.+ |-.+ +.++++. ++ |+.-.+-|+|| |.||
T Consensus 135 ~l~~~~~DlVlsD~apn--sG~~----------------------------~~D~~rs~~L---L~~a~~~LkpG~G~FV 181 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGES--SSSS----------------------------VTEGERTVRV---LDTVEKWLACGVDNFC 181 (277)
T ss_dssp TSCCCCCSEEEECCCCC--CSCH----------------------------HHHHHHHHHH---HHHHHHHHTTCCSEEE
T ss_pred hcCCCCccEEEecCccC--cCch----------------------------HHHHHHHHHH---HHHHHHHhCCCCCeEE
Confidence 46778899999998877 3221 1111111 22 66666789999 9999
Q ss_pred EEecc
Q 017363 225 FVLFS 229 (373)
Q Consensus 225 l~~~g 229 (373)
+-.+.
T Consensus 182 ~KVf~ 186 (277)
T 3evf_A 182 VKVLA 186 (277)
T ss_dssp EEESC
T ss_pred EEecC
Confidence 98775
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.36 Score=49.74 Aligned_cols=144 Identities=15% Similarity=0.162 Sum_probs=69.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC--CCCccceeeccC
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM--PPSRKYFAFGVP 140 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l--~~~~~~f~~gvp 140 (373)
..+|+|.+||+|..-+.+...+.+.-... .... .......+++-.|+-..-..-.-.++ .....-+-...+
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-~~~~------~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~g 317 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVK-HYNA------SEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNA 317 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHH-TSCH------HHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSC
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhcccc-ccch------HHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceecc
Confidence 34999999999987776655543221110 0000 00011347888777432221111111 110101111223
Q ss_pred cccccCCCCCCcceEEEccCcc---cccccchhhhhcCCCCCCCCCc---eeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 141 GSFHGRLFPKSSLHFANSSSSL---NWLSKISKEILDSRSPAWNKGS---IICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~al---HWLS~~P~~~~~~~~~~~nkg~---I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
-+|....++...+|+|+++=-+ .|-... +.. .+-|.-|. .... .++. ...|+ .||.+-.
T Consensus 318 DtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~~--d~r~~~g~~~~~~~~-~~~~--------~~~~~-~Fl~~~l 382 (544)
T 3khk_A 318 DSFLDDQHPDLRADFVMTNPPFNMKDWWHEK---LAD--DPRWTINTNGEKRIL-TPPT--------GNANF-AWMLHML 382 (544)
T ss_dssp CTTTSCSCTTCCEEEEEECCCSSCCSCCCGG---GTT--CGGGEECCC--CEEC-CCCT--------TCTHH-HHHHHHH
T ss_pred chhcCcccccccccEEEECCCcCCccccchh---hhh--hhhhhcCcccccccc-cCCC--------cchhH-HHHHHHH
Confidence 3455556778899999997333 364321 110 00010000 0000 0100 01133 5999999
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||+++++++
T Consensus 383 ~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 383 YHLAPTGSMALLLA 396 (544)
T ss_dssp HTEEEEEEEEEEEE
T ss_pred HHhccCceEEEEec
Confidence 99999999999985
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=92.51 E-value=0.32 Score=48.42 Aligned_cols=19 Identities=21% Similarity=0.137 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|..|+.+.
T Consensus 291 ~~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp SSEEEEETCTTTHHHHHHH
T ss_pred CCEEEEeeccchHHHHHHH
Confidence 3589999999999999874
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=92.11 E-value=0.78 Score=43.12 Aligned_cols=70 Identities=9% Similarity=-0.083 Sum_probs=41.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--C--Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--P--SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~--~~~~f~~g 138 (373)
--+|+|+|||+|+.|+.+.. + . . -.|+.+|+-..-+..+=+++. . .+-.+..+
T Consensus 126 g~~VlD~~aG~G~~~i~~a~--------~-g------------~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAV--------Y-G------------K--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHH--------H-T------------C--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecCcCcHHHHHHHH--------h-c------------C--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 46899999999999997731 1 0 0 168888886544444444332 1 11234455
Q ss_pred cCcccccCCCCCCcceEEEcc
Q 017363 139 VPGSFHGRLFPKSSLHFANSS 159 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss 159 (373)
+... +.+.+.+|.++..
T Consensus 183 D~~~----~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 183 DNRD----FPGENIADRILMG 199 (278)
T ss_dssp CTTT----CCCCSCEEEEEEC
T ss_pred cHHH----hccccCCCEEEEC
Confidence 5533 3456778877643
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=91.98 E-value=0.35 Score=46.33 Aligned_cols=24 Identities=17% Similarity=0.346 Sum_probs=18.3
Q ss_pred HHHHHHHhhhccCCeEEEEeccCC
Q 017363 208 AFLNARAHELVPGGLIVFVLFSLP 231 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g~~ 231 (373)
.||..-.+-|+|||++++......
T Consensus 272 ~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 272 KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCCEEEEEEeecC
Confidence 356666678999999999877654
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=91.57 E-value=1.6 Score=43.15 Aligned_cols=19 Identities=21% Similarity=0.301 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
.-+|+|+|||+|..|+.+.
T Consensus 287 ~~~VLDlgcG~G~~~~~la 305 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLA 305 (433)
T ss_dssp TCEEEEESCTTTTTHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4689999999999999885
|
| >3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=91.55 E-value=0.82 Score=47.06 Aligned_cols=132 Identities=17% Similarity=0.116 Sum_probs=66.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC--CCCc-cceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM--PPSR-KYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l--~~~~-~~f~~g 138 (373)
...+|+|.+||+|...+.+...+. + ....+++-.|+-..-+.-.-.++ .... .-+-..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~----~---------------~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSR----Q---------------PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCS----C---------------TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCEEeecccchhHHHHHHHHHHH----h---------------ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 457999999999998877755431 0 11236666666432221111111 1100 000111
Q ss_pred cCccccc--CCCCCCcceEEEcc--CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 139 VPGSFHG--RLFPKSSLHFANSS--SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 139 vpgSFy~--rlfP~~Svd~~~Ss--~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
.+-+|.. ..++...+|+|+++ +...|-.. .....+.....| |.+. .. ...|+ .|+.+-.
T Consensus 282 ~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~--G~~~-~~------------s~~~~-~Fl~~~l 344 (542)
T 3lkd_A 282 NADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPF--GKLA-PK------------SKADF-AFLLHGY 344 (542)
T ss_dssp ESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGG--SSCC-CT------------TCCHH-HHHHHHH
T ss_pred ecceecccccccccccccEEEecCCcCCccccc-hhhhhhhhhhhh--hhcC-CC------------chhhH-HHHHHHH
Confidence 1122222 23567889999998 55566321 111111110000 1110 00 01233 5899999
Q ss_pred hhhc-cCCeEEEEecc
Q 017363 215 HELV-PGGLIVFVLFS 229 (373)
Q Consensus 215 ~EL~-pGG~lvl~~~g 229 (373)
+-|+ |||+++++++.
T Consensus 345 ~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 345 YHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HTBCTTTCEEEEEEET
T ss_pred HHhCCCceeEEEEecc
Confidence 9999 99999999864
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=91.51 E-value=0.44 Score=46.33 Aligned_cols=19 Identities=16% Similarity=0.046 Sum_probs=16.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|+|||+|..++.+.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a 236 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELA 236 (373)
T ss_dssp SCCEEETTCTTCHHHHHHH
T ss_pred CCEEEEccCcCcHHHHHHH
Confidence 3689999999999888773
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=90.90 E-value=0.48 Score=47.17 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=19.2
Q ss_pred HHHHHHHhhhccCCeEEEEecc
Q 017363 208 AFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.||+.-.+-|+|||+++++++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 6888888999999999999863
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=90.04 E-value=0.1 Score=48.93 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=16.6
Q ss_pred EEeeecCCCCcccHHHHH
Q 017363 65 KLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~ 82 (373)
+|+|+|||+|..|..+.+
T Consensus 49 ~VLEIG~G~G~lt~~L~~ 66 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE 66 (271)
T ss_dssp CEEEECCTTSHHHHHHHH
T ss_pred eEEEEeCchHHHHHHHHH
Confidence 999999999999998864
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=89.47 E-value=0.058 Score=49.41 Aligned_cols=21 Identities=24% Similarity=0.222 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
..-+|+|+|||+|..|..+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 346899999999999998853
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=88.99 E-value=1.6 Score=47.15 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=20.9
Q ss_pred HHHHHHHHHhhhccCCeEEEEecc
Q 017363 206 TEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
...|+.+-.+-|+|||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 456899999999999999999974
|
| >3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} | Back alignment and structure |
|---|
Probab=88.41 E-value=0.71 Score=43.63 Aligned_cols=19 Identities=32% Similarity=0.529 Sum_probs=16.3
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~ 81 (373)
..+|+|||||.|..|..++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa 109 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAA 109 (282)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHH
Confidence 3589999999999998763
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=86.67 E-value=0.1 Score=47.42 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=17.9
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
...+|+|+|||+|..|..+..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHH
Confidence 457999999999999998843
|
| >2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* | Back alignment and structure |
|---|
Probab=86.66 E-value=0.29 Score=48.08 Aligned_cols=19 Identities=11% Similarity=-0.130 Sum_probs=16.8
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017363 64 FKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~ 82 (373)
.+|+|+|||+|..++.+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~ 67 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFAL 67 (378)
T ss_dssp SEEEESSCTTSHHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHH
Confidence 5899999999999998853
|
| >3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=86.53 E-value=0.19 Score=47.20 Aligned_cols=21 Identities=14% Similarity=0.191 Sum_probs=18.4
Q ss_pred ceEEeeecCCCCcccHHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQN 83 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ 83 (373)
..+|+|+|||+|..|..+...
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHH
T ss_pred cCEEEEEccccHHHHHHHHHh
Confidence 468999999999999988654
|
| >2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=85.34 E-value=1.2 Score=42.32 Aligned_cols=20 Identities=15% Similarity=0.013 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~ 82 (373)
.-+|+|+|||+|.-|+.+.+
T Consensus 103 g~~VLDlcaG~G~kt~~la~ 122 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAA 122 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHH
Confidence 46899999999999998754
|
| >3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* | Back alignment and structure |
|---|
Probab=84.60 E-value=1.3 Score=43.81 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=30.8
Q ss_pred CCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHH
Q 017363 20 GDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 20 G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~ 82 (373)
....|+-+...-+.....+...+.. . . ....+|+|++||+|..++.+.+
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~---~----~-------~~g~~VLDlfaGtG~~sl~aa~ 72 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCK---K----L-------GRPVKVADPLSASGIRAIRFLL 72 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHH---H----H-------CSCEEEEESSCTTSHHHHHHHH
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhh---c----c-------CCCCEEEECCCcccHHHHHHHH
Confidence 4568877766655554433332211 0 0 1247999999999999998843
|
| >2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* | Back alignment and structure |
|---|
Probab=84.56 E-value=1.5 Score=44.86 Aligned_cols=21 Identities=29% Similarity=0.456 Sum_probs=18.8
Q ss_pred HHHHHHHhhhccCCeEEEEec
Q 017363 208 AFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
.||..-.+-|+|||+++++++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 688888899999999999986
|
| >3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* | Back alignment and structure |
|---|
Probab=83.64 E-value=6 Score=37.57 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=18.1
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~ 82 (373)
...+|+|+|||.|..|-.+++
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~ 101 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAA 101 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHT
T ss_pred CCCEEEEcCCCCCHHHHHHHH
Confidence 468999999999999988743
|
| >3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* | Back alignment and structure |
|---|
Probab=80.68 E-value=0.18 Score=46.49 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
..-+|+|+|||+|..|..+.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~ 50 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLL 50 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHT
T ss_pred CcCEEEEEcCchHHHHHHHH
Confidence 34689999999999998884
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 373 | ||||
| d1m6ex_ | 359 | c.66.1.35 (X:) Salicylic acid carboxyl methyltrans | 1e-107 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Score = 317 bits (814), Expect = e-107
Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 34/371 (9%)
Query: 13 FPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCS 72
M GG G+ SYA NS QR +I K + +I ++ +AD GCS
Sbjct: 7 LHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTV-----TTRLAIADLGCS 61
Query: 73 VGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSR 132
GPN AV +I+ V+ + ++ E+Q+F ND GNDFN +F+++P
Sbjct: 62 SGPNALFAVTELIKTVEELRK------KMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN 115
Query: 133 K----YFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICS 188
F GVPGSF+GRLFP+++LHF +SS SL WLS++ I ++ + + +
Sbjct: 116 DVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIY-----MAN 170
Query: 189 GLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFL 248
+ V AY QF+ D FL RA E+VPGG +V + + + ++ L
Sbjct: 171 TCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRA-STECCLIWQLL 229
Query: 249 GSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP-------- 300
L M ++GLI+EEK+D FNIP Y P+ E++A I + G F I+ ++
Sbjct: 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTK 289
Query: 301 -DPPLMRLKPSPESVTSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDH 359
++ +V +RAV E ++ +HFG +++ +F+ + E +
Sbjct: 290 DGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEK--TKF 347
Query: 360 NNVNLFVLLKR 370
+N+ V L R
Sbjct: 348 --INVIVSLIR 356
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.27 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.16 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.16 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 99.14 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.13 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 99.13 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.12 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 99.04 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 99.02 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.01 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 99.01 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 99.01 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.0 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 98.98 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 98.96 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.92 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.78 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.77 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.75 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.74 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.73 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.71 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.7 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.67 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 98.63 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.62 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.61 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 98.38 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 98.34 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.25 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 98.18 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 98.09 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 98.05 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 97.97 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.96 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 97.96 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 97.9 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.89 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.83 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 97.82 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 97.81 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.68 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.6 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.6 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.57 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.55 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.55 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.4 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.4 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 97.01 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 96.95 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.93 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 96.88 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 96.86 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.33 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.32 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 96.12 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.94 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.29 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 94.1 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 93.71 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 92.74 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 92.68 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 91.52 | |
| d2ih2a1 | 223 | DNA methylase TaqI, N-terminal domain {Thermus aqu | 91.52 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.87 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 86.2 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 85.97 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 83.94 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 83.51 | |
| d2okca1 | 425 | Type I restriction enzyme StySJI M protein {Bacter | 81.01 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 80.92 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 80.92 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=5.9e-102 Score=763.98 Aligned_cols=343 Identities=34% Similarity=0.559 Sum_probs=309.7
Q ss_pred cCccccccCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017363 9 LPGSFPMVGGDGDYSYAKNSSFQRMIIDAAKEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAV 88 (373)
Q Consensus 9 ~~~~~~M~gG~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i 88 (373)
++++|||+||||++||++||..|++++..++|+|++||.+++.... .+++++|||||||+|+||+.+|+.||++|
T Consensus 3 ~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~-----~~~~~~IADlGCS~G~Ntl~~v~~iI~~i 77 (359)
T d1m6ex_ 3 VRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDT-----VTTRLAIADLGCSSGPNALFAVTELIKTV 77 (359)
T ss_dssp CHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSS-----SSSEECCEEESCCSSTTTTTGGGTTHHHH
T ss_pred ccEeeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-----CCCceEEEEeCCCCCccHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999653221 35789999999999999999999999999
Q ss_pred HHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCC----ccceeeccCcccccCCCCCCcceEEEccCcccc
Q 017363 89 QTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPS----RKYFAFGVPGSFHGRLFPKSSLHFANSSSSLNW 164 (373)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~----~~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHW 164 (373)
+++|++.+. .++|+|||||||||+||||+||++||.. ++||++|||||||+||||++|+||+||++||||
T Consensus 78 ~~~~~~~~~------~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHW 151 (359)
T d1m6ex_ 78 EELRKKMGR------ENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp HHHHHSSSC------SSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTB
T ss_pred HHHHHhcCC------CCCCeEEEEeCCCCcchHHHHHHhccccccCCCCeEEEecCCchhhhcCCCCceEEeeehhhhhh
Confidence 999986542 2578999999999999999999999863 579999999999999999999999999999999
Q ss_pred cccchhhhhcCCCCCCCCCceeecC-CCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEeccCCCCCCccCCCchh
Q 017363 165 LSKISKEILDSRSPAWNKGSIICSG-LVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFSLPNGVPMIDSNGGK 243 (373)
Q Consensus 165 LS~~P~~~~~~~~~~~nkg~I~~~~-~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~ 243 (373)
||++|+.+. +|||+||+.+ ++++|.+||++||++||..||++||+||+|||+|+++++||++..+.+ ++.+.
T Consensus 152 LS~vP~~l~------~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~-~~~~~ 224 (359)
T d1m6ex_ 152 LSQVPIGIE------SNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAS-TECCL 224 (359)
T ss_dssp CSSCCSCCC------CCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSS-TTTST
T ss_pred hhcCCcccc------CCCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCC-Cccch
Confidence 999998875 4888899865 789999999999999999999999999999999999999999887654 35678
Q ss_pred HHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEecCC--C---CC----CCCCCHHHH
Q 017363 244 LYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLPDP--P---LM----RLKPSPESV 314 (373)
Q Consensus 244 ~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~~~--~---~~----~~~~~~~~~ 314 (373)
+|++|.++|++||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|+++.. + .. +....++.+
T Consensus 225 ~~~~l~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~ 304 (359)
T d1m6ex_ 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNV 304 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999977521 1 11 112357899
Q ss_pred HHhHHHhhhhHHHhhhChHHHHHHHHHHHHHHHhhccccccccCCCeEEEEEEEEeccC
Q 017363 315 TSQIRAVFEGVVKEHFGYDLVDKIFNFFTAKFAENFIFGELIKDHNNVNLFVLLKRVIN 373 (373)
Q Consensus 315 ~~~iRa~~e~~l~~h~g~~i~delf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 373 (373)
++++|||+||+|++|||++|+|+||+||+++++++++.. ..++++++++|+||.|
T Consensus 305 a~~~RA~~e~~l~~hfg~~i~D~lF~r~~~~v~~~~~~~----~~~~~~~~~sL~rK~~ 359 (359)
T d1m6ex_ 305 ARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKE----KTKFINVIVSLIRKSD 359 (359)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSS----CCEEEEEEEEEEBCCC
T ss_pred HHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHhhHhhc----CCceEEEEEEEEecCC
Confidence 999999999999999999999999999999999999863 4679999999999976
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.27 E-value=4.8e-11 Score=106.39 Aligned_cols=151 Identities=13% Similarity=0.132 Sum_probs=96.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh----cCCCCccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ----TMPPSRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~----~l~~~~~~f~~ 137 (373)
...+|+|+|||+|..|+.+.. + -. +|.-.|+..+- -...+ .....+--|..
T Consensus 15 ~~~rVLDiGcG~G~~~~~l~~--------~--------------~~--~v~gvD~s~~~-i~~A~~~~~~~~~~~i~~~~ 69 (231)
T d1vl5a_ 15 GNEEVLDVATGGGHVANAFAP--------F--------------VK--KVVAFDLTEDI-LKVARAFIEGNGHQQVEYVQ 69 (231)
T ss_dssp SCCEEEEETCTTCHHHHHHGG--------G--------------SS--EEEEEESCHHH-HHHHHHHHHHTTCCSEEEEE
T ss_pred CcCEEEEecccCcHHHHHHHH--------h--------------CC--EEEEEECCHHH-Hhhhhhcccccccccccccc
Confidence 457999999999999877621 1 01 56666764322 11111 11111222443
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ +...--||++|+|+++|..++||+. |...+|+.-++-|
T Consensus 70 ~---d~~~l~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~~r~L 108 (231)
T d1vl5a_ 70 G---DAEQMPFTDERFHIVTCRIAAHHFP--------------------------------------NPASFVSEAYRVL 108 (231)
T ss_dssp C---CC-CCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHE
T ss_pred c---ccccccccccccccccccccccccC--------------------------------------CHHHHHHHHHHhc
Confidence 3 3444447899999999999999975 4457888889999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+|||++++......+. ..++.+...+......+. ....+.+++...+++.| |++++++
T Consensus 109 kpgG~l~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~aG-f~~~~~~ 166 (231)
T d1vl5a_ 109 KKGGQLLLVDNSAPEN---------DAFDVFYNYVEKERDYSH------------HRAWKKSDWLKMLEEAG-FELEELH 166 (231)
T ss_dssp EEEEEEEEEEEEBCSS---------HHHHHHHHHHHHHHCTTC------------CCCCBHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCcEEEEEeCCCCCC---------HHHHHHHHHHHhhcccCc------------ccCCCHHHHHHHHHHCC-CEEEEEE
Confidence 9999999987665432 133444333332222111 13457899999999999 9988877
Q ss_pred Eec
Q 017363 298 KLP 300 (373)
Q Consensus 298 ~~~ 300 (373)
.++
T Consensus 167 ~~~ 169 (231)
T d1vl5a_ 167 CFH 169 (231)
T ss_dssp EEE
T ss_pred Eee
Confidence 664
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.16 E-value=3.3e-10 Score=101.79 Aligned_cols=151 Identities=15% Similarity=0.187 Sum_probs=93.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhh---HhhcCCCCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNT---LFQTMPPSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~---lf~~l~~~~~~f~~gv 139 (373)
--||+|+|||+|..|..+.+.. . +|+--|+..+--.. ..+.....+.-|..+.
T Consensus 17 ~~rILDiGcGtG~~~~~la~~~----------------------~--~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d 72 (234)
T d1xxla_ 17 EHRVLDIGAGAGHTALAFSPYV----------------------Q--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT 72 (234)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS----------------------S--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB
T ss_pred CCEEEEeCCcCcHHHHHHHHhC----------------------C--eEEEEeCChhhhhhhhhhhcccccccccccccc
Confidence 4689999999999998773210 0 34555554321111 1111111122344444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. .+--||++|+|+++|+.++||+. |...+|+.-.+-|+|
T Consensus 73 ~---~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~~r~Lkp 111 (234)
T d1xxla_ 73 A---ESLPFPDDSFDIITCRYAAHHFS--------------------------------------DVRKAVREVARVLKQ 111 (234)
T ss_dssp T---TBCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEE
T ss_pred c---ccccccccccceeeeeceeeccc--------------------------------------CHHHHHHHHHHeeCC
Confidence 3 23337899999999999999965 344688888999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++...+.++. + .++.+.+.+....... .....+.+++..+++..| |.+..++.+
T Consensus 112 gG~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~g-f~~~~~~~~ 169 (234)
T d1xxla_ 112 DGRFLLVDHYAPED-P--------VLDEFVNHLNRLRDPS------------HVRESSLSEWQAMFSANQ-LAYQDIQKW 169 (234)
T ss_dssp EEEEEEEEECBCSS-H--------HHHHHHHHHHHHHCTT------------CCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CcEEEEEEcCCCCC-H--------HHHHHHHHHHhhCCCc------------ccccCCHHHHHHHHHHCC-CceeEEEEe
Confidence 99999987665432 1 2222222222221111 123347899999999999 999888866
Q ss_pred c
Q 017363 300 P 300 (373)
Q Consensus 300 ~ 300 (373)
.
T Consensus 170 ~ 170 (234)
T d1xxla_ 170 N 170 (234)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=5.6e-11 Score=107.66 Aligned_cols=98 Identities=16% Similarity=0.034 Sum_probs=75.1
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+........+|.+++|+++|..+|||+...+ .|+..+|+..++-||
T Consensus 139 ~~~~~~~~~~~~~~fD~i~~~~~l~~~~~~~----------------------------------~~~~~~l~~i~~~Lk 184 (257)
T d2a14a1 139 VHLGNPLAPAVLPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLK 184 (257)
T ss_dssp TTSSSTTTTCCCCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEE
T ss_pred cccccccccccCCcccEEeehhhHHHhcccH----------------------------------HHHHHHHHHHHhccC
Confidence 4444455678899999999999999976433 366789999999999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||+|++......+... ......+.++.+.++++++++++| |+|..++.
T Consensus 185 pGG~li~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~ 233 (257)
T d2a14a1 185 PGGHLVTTVTLRLPSYM------------------------------VGKREFSCVALEKGEVEQAVLDAG-FDIEQLLH 233 (257)
T ss_dssp EEEEEEEEEESSCCEEE------------------------------ETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCcEEEEEEecccccce------------------------------eccccccccCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 99999998875443211 112234567889999999999999 99999987
Q ss_pred ecC
Q 017363 299 LPD 301 (373)
Q Consensus 299 ~~~ 301 (373)
...
T Consensus 234 ~~~ 236 (257)
T d2a14a1 234 SPQ 236 (257)
T ss_dssp ECC
T ss_pred ecc
Confidence 653
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=3.1e-10 Score=104.68 Aligned_cols=158 Identities=13% Similarity=0.139 Sum_probs=93.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCch---hhHhhcCCCCccc-ee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDF---NTLFQTMPPSRKY-FA 136 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDF---n~lf~~l~~~~~~-f~ 136 (373)
...++|+|+|||+|..|..++..+ ...+ +...+.+.--|...+.. +..+...+....+ |-
T Consensus 39 ~~~~~VLDiGcG~G~~~~~ll~~l----~~~~------------~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~ 102 (280)
T d1jqea_ 39 KSEIKILSIGGGAGEIDLQILSKV----QAQY------------PGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFA 102 (280)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHH----HHHS------------TTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHh----hhhc------------cCCceEEEEEeCcHHHHHHHHHHHhhcccccccccc
Confidence 457899999999999888876555 3332 12345666677543221 1222222211111 11
Q ss_pred --eccCc---ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHH
Q 017363 137 --FGVPG---SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLN 211 (373)
Q Consensus 137 --~gvpg---SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~ 211 (373)
....- +....-++++++|+|+|+.+|||+. |...+|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~--------------------------------------d~~~~l~ 144 (280)
T d1jqea_ 103 WHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--------------------------------------DIPATLK 144 (280)
T ss_dssp EECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCS--------------------------------------CHHHHHH
T ss_pred chhhhhhhhcchhcccCCCCceeEEEEccceecCC--------------------------------------CHHHHHH
Confidence 11000 1113457889999999999999975 3446888
Q ss_pred HHHhhhccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCce
Q 017363 212 ARAHELVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCF 291 (373)
Q Consensus 212 ~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF 291 (373)
.-.+-|+|||.|++........ ..++. ..+...-. . .. ...+.+.+++..++++.| |
T Consensus 145 ~l~~~LkpgG~l~i~~~~~~~~----------~~~l~----~~~~~~~~-~-----~~--~~~~~~~~~~~~~L~~~G-~ 201 (280)
T d1jqea_ 145 FFHSLLGTNAKMLIIVVSGSSG----------WDKLW----KKYGSRFP-Q-----DD--LCQYITSDDLTQMLDNLG-L 201 (280)
T ss_dssp HHHHTEEEEEEEEEEEECTTSH----------HHHHH----HHHGGGSC-C-----CT--TSCCCCHHHHHHHHHHHT-C
T ss_pred HHHhhCCCCCEEEEEEecCcch----------HHHHH----HHHHHhcC-C-----Cc--ccccCCHHHHHHHHHHCC-C
Confidence 8889999999999987653211 12222 22222110 0 00 113567899999999998 7
Q ss_pred EEeE
Q 017363 292 RIER 295 (373)
Q Consensus 292 ~I~~ 295 (373)
....
T Consensus 202 ~~~~ 205 (280)
T d1jqea_ 202 KYEC 205 (280)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 5443
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.13 E-value=5.9e-09 Score=96.19 Aligned_cols=146 Identities=15% Similarity=0.132 Sum_probs=90.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----C-CCcccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----P-PSRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~-~~~~~f~ 136 (373)
...+|+|+|||+|..++.+. +++ ..+|.--|+...- -...+.. . ..+--|.
T Consensus 67 ~~~~vLDiGcG~G~~~~~la--------~~~---------------~~~v~gvD~s~~~-i~~a~~~~~~~gl~~~v~~~ 122 (282)
T d2o57a1 67 RQAKGLDLGAGYGGAARFLV--------RKF---------------GVSIDCLNIAPVQ-NKRNEEYNNQAGLADNITVK 122 (282)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---------------CCEEEEEESCHHH-HHHHHHHHHHHTCTTTEEEE
T ss_pred CCCEEEEeCCCCcHHHhhhh--------ccC---------------CcEEEEEeccchh-hhhhhccccccccccccccc
Confidence 45799999999998877662 221 1156666654321 1111111 0 0112244
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
.+ ++.+--+|++|+|+|+|..++||+. |...+|+.-++-
T Consensus 123 ~~---d~~~l~~~~~sfD~V~~~~~l~h~~--------------------------------------d~~~~l~~~~~~ 161 (282)
T d2o57a1 123 YG---SFLEIPCEDNSYDFIWSQDAFLHSP--------------------------------------DKLKVFQECARV 161 (282)
T ss_dssp EC---CTTSCSSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHH
T ss_pred cc---ccccccccccccchhhccchhhhcc--------------------------------------CHHHHHHHHHHh
Confidence 44 4455457999999999999999864 344688888899
Q ss_pred hccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEE
Q 017363 217 LVPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 217 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
|+|||+|++......+.... ..... + +... ..| ..+|.+++..++++.| |+....
T Consensus 162 LkpgG~l~~~~~~~~~~~~~-----~~~~~-~---~~~~--------------~~~-~~~s~~~~~~~l~~~G-f~~i~~ 216 (282)
T d2o57a1 162 LKPRGVMAITDPMKEDGIDK-----SSIQP-I---LDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLRT 216 (282)
T ss_dssp EEEEEEEEEEEEEECTTCCG-----GGGHH-H---HHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCcEEEEEEeecCCCCch-----hHHHH-H---HHHh--------------ccC-CCCCHHHHHHHHHHcC-CceEEE
Confidence 99999999987654433221 11111 1 1111 111 3468899999999999 875554
Q ss_pred E
Q 017363 297 D 297 (373)
Q Consensus 297 e 297 (373)
+
T Consensus 217 ~ 217 (282)
T d2o57a1 217 F 217 (282)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.13 E-value=2.2e-09 Score=100.20 Aligned_cols=177 Identities=12% Similarity=0.101 Sum_probs=105.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhh---HhhcCCC-Cccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNT---LFQTMPP-SRKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~---lf~~l~~-~~~~f~~ 137 (373)
.-.+|+|+|||.|..++.+.. ++. .+|.--|+..+-... ..+...- ....+..
T Consensus 52 ~g~~VLDiGCG~G~~a~~~a~--------~~g---------------~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~ 108 (280)
T d2fk8a1 52 PGMTLLDIGCGWGTTMRRAVE--------RFD---------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 108 (280)
T ss_dssp TTCEEEEESCTTSHHHHHHHH--------HHC---------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHH--------hCc---------------eeEEEecchHHHHHHHHHHHHhhccccchhhhh
Confidence 357999999999988876632 111 145555555433221 1111111 1122333
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
.... .+++++|.++|..+++.+.. +++..||+.-++-|
T Consensus 109 ~d~~------~~~~~fD~i~si~~~eh~~~------------------------------------~~~~~~f~~i~~~L 146 (280)
T d2fk8a1 109 QGWE------DFAEPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIM 146 (280)
T ss_dssp SCGG------GCCCCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHS
T ss_pred hhhh------hhccchhhhhHhhHHHHhhh------------------------------------hhHHHHHHHHHhcc
Confidence 3321 23578999999999988642 36778999999999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHHHHHHhcCceEEeEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELKAIIERNGCFRIERM 296 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~~~ie~~gsF~I~~l 296 (373)
||||+|++...+..+............++... +.+ -+..+.+|. +.||.+|+...+++.| |+|...
T Consensus 147 kpgG~~~i~~i~~~~~~~~~~~~~~~~~~~~~--~~d----------fI~kyifPgg~lPS~~~l~~~~e~aG-f~v~~~ 213 (280)
T d2fk8a1 147 PADGRMTVQSSVSYHPYEMAARGKKLSFETAR--FIK----------FIVTEIFPGGRLPSTEMMVEHGEKAG-FTVPEP 213 (280)
T ss_dssp CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHH--HHH----------HHHHHTSTTCCCCCHHHHHHHHHHTT-CBCCCC
T ss_pred CCCceEEEEEeeccCcchhhhccccccccccc--ccc----------hhhhhccCCCcccchHhhhhhHHhhc-ccccee
Confidence 99999999887655431110000000000000 011 122344554 6799999999999998 988776
Q ss_pred EEecCCCCCCCCCCHHHHHHhHHHhhhhHHH
Q 017363 297 DKLPDPPLMRLKPSPESVTSQIRAVFEGVVK 327 (373)
Q Consensus 297 e~~~~~~~~~~~~~~~~~~~~iRa~~e~~l~ 327 (373)
+.+ +..++.++++|.+.+.+
T Consensus 214 ~~~-----------~~hYa~TL~~W~~~f~~ 233 (280)
T d2fk8a1 214 LSL-----------RPHYIKTLRIWGDTLQS 233 (280)
T ss_dssp EEC-----------HHHHHHHHHHHHHHHHH
T ss_pred eec-----------ccCHHHHHHHHHHHHHH
Confidence 644 45677777777666554
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.12 E-value=1.7e-10 Score=106.15 Aligned_cols=144 Identities=16% Similarity=0.194 Sum_probs=91.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-CCCCcc-ceeec
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-MPPSRK-YFAFG 138 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l~~~~~-~f~~g 138 (373)
.+..+|+|+|||+|..|..++... + . +|..-|.... |-...+. +...+. -|..
T Consensus 92 ~~~~~vLD~GcG~G~~t~~ll~~~-------~---------------~-~v~~vD~s~~-~l~~a~~~~~~~~~~~~~~- 146 (254)
T d1xtpa_ 92 HGTSRALDCGAGIGRITKNLLTKL-------Y---------------A-TTDLLEPVKH-MLEEAKRELAGMPVGKFIL- 146 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-------C---------------S-EEEEEESCHH-HHHHHHHHTTTSSEEEEEE-
T ss_pred CCCCeEEEecccCChhhHHHHhhc-------C---------------c-eEEEEcCCHH-HHHhhhccccccccceeEE-
Confidence 457899999999999998663221 1 0 4555555432 2222221 221111 1222
Q ss_pred cCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
+++..--++++++|+|+|..+|||++. .|+..||+.-++-|+
T Consensus 147 --~d~~~~~~~~~~fD~I~~~~vl~hl~d------------------------------------~d~~~~l~~~~~~Lk 188 (254)
T d1xtpa_ 147 --ASMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALT 188 (254)
T ss_dssp --SCGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred --ccccccccCCCccceEEeeccccccch------------------------------------hhhHHHHHHHHHhcC
Confidence 233344467899999999999999752 156689999999999
Q ss_pred cCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEE
Q 017363 219 PGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDK 298 (373)
Q Consensus 219 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~ 298 (373)
|||++++.-......... .+. .-+..++|.++++++++++| |+|.+-+.
T Consensus 189 pgG~iii~e~~~~~~~~~-----------------------------~d~-~d~~~~rs~~~~~~l~~~aG-f~ii~~~~ 237 (254)
T d1xtpa_ 189 PNGYIFFKENCSTGDRFL-----------------------------VDK-EDSSLTRSDIHYKRLFNESG-VRVVKEAF 237 (254)
T ss_dssp EEEEEEEEEEBC--CCEE-----------------------------EET-TTTEEEBCHHHHHHHHHHHT-CCEEEEEE
T ss_pred CCcEEEEEecCCCCCcce-----------------------------ecc-cCCceeCCHHHHHHHHHHcC-CEEEEEEe
Confidence 999999876543322110 000 11335789999999999999 98876554
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=4.6e-10 Score=100.26 Aligned_cols=148 Identities=16% Similarity=0.061 Sum_probs=95.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
.+..+|+|+|||+|.++..+++. .+. +|+.-|+..+--...=+.++....-.+.-..
T Consensus 59 ~~~~~vLDiGcG~G~~~~~l~~~----------------------~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~ 115 (222)
T d2ex4a1 59 TGTSCALDCGAGIGRITKRLLLP----------------------LFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFC 115 (222)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTT----------------------TCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEE
T ss_pred CCCCEEEEeccCCCHhhHHHHHh----------------------cCC-EEEEeecCHHHhhcccccccccccccccccc
Confidence 34679999999999998876211 111 5666776543322111112111111122233
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+++.+-.+|++++|+|+|..++|++.. | |+..+|+.-++-|+||
T Consensus 116 ~d~~~~~~~~~~fD~I~~~~~l~h~~~-~-----------------------------------~~~~~l~~i~~~Lk~~ 159 (222)
T d2ex4a1 116 CGLQDFTPEPDSYDVIWIQWVIGHLTD-Q-----------------------------------HLAEFLRRCKGSLRPN 159 (222)
T ss_dssp CCGGGCCCCSSCEEEEEEESCGGGSCH-H-----------------------------------HHHHHHHHHHHHEEEE
T ss_pred ccccccccccccccccccccccccchh-h-----------------------------------hhhhHHHHHHHhcCCc
Confidence 456666678999999999999999763 1 4557888899999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
|.+++......+..... . .-..+.++.+++++++++.| |++.+.+..
T Consensus 160 G~~~i~~~~~~~~~~~~-------------------~------------~~~~~~~~~~~~~~l~~~aG-f~ii~~~~q 206 (222)
T d2ex4a1 160 GIIVIKDNMAQEGVILD-------------------D------------VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 206 (222)
T ss_dssp EEEEEEEEEBSSSEEEE-------------------T------------TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred ceEEEEEcccccccccc-------------------c------------CCceeeCCHHHHHHHHHHcC-CEEEEEEEe
Confidence 99999865433321100 0 01236789999999999999 988777653
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.02 E-value=7e-10 Score=97.69 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=70.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC-C--CCccceeecc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM-P--PSRKYFAFGV 139 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l-~--~~~~~f~~gv 139 (373)
..+|+|+|||+|..|..+. +. -.+|+-.|+..+. -...+.. . ....-++.+.
T Consensus 38 ~~~ILDiGcG~G~~~~~la--------~~----------------~~~v~giD~S~~~-i~~ak~~~~~~~~~~~~~~~d 92 (226)
T d1ve3a1 38 RGKVLDLACGVGGFSFLLE--------DY----------------GFEVVGVDISEDM-IRKAREYAKSRESNVEFIVGD 92 (226)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HT----------------TCEEEEEESCHHH-HHHHHHHHHHTTCCCEEEECC
T ss_pred CCEEEEECCCcchhhhhHh--------hh----------------hcccccccccccc-hhhhhhhhccccccccccccc
Confidence 3689999999999987662 11 0167777775333 2222221 0 1122344444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
. ..--+|++|+|+|+|+.++||++. .|+..+|+.-++-|||
T Consensus 93 ~---~~l~~~~~~fD~I~~~~~l~~~~~------------------------------------~d~~~~l~~i~~~Lkp 133 (226)
T d1ve3a1 93 A---RKLSFEDKTFDYVIFIDSIVHFEP------------------------------------LELNQVFKEVRRVLKP 133 (226)
T ss_dssp T---TSCCSCTTCEEEEEEESCGGGCCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred c---ccccccCcCceEEEEecchhhCCh------------------------------------hHHHHHHHHHHHHcCc
Confidence 3 333478999999999999999741 2666899999999999
Q ss_pred CCeEEEEecc
Q 017363 220 GGLIVFVLFS 229 (373)
Q Consensus 220 GG~lvl~~~g 229 (373)
||+|++.+..
T Consensus 134 gG~lii~~~~ 143 (226)
T d1ve3a1 134 SGKFIMYFTD 143 (226)
T ss_dssp EEEEEEEEEC
T ss_pred CcEEEEEEcC
Confidence 9999998764
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.01 E-value=3.1e-08 Score=92.77 Aligned_cols=127 Identities=9% Similarity=0.101 Sum_probs=78.3
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEe
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVL 227 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 227 (373)
+|++++|.|+|--++..+....... ..+.+..||+.-++-|||||+|++..
T Consensus 122 ~~~~~fD~i~sie~~eH~~~~~~~~-----------------------------~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 122 EFDEPVDRIVSLGAFEHFADGAGDA-----------------------------GFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp GCCCCCSEEEEESCGGGTTCCSSCC-----------------------------STTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ccccccceEeechhHHhcchhhhhh-----------------------------HHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 5678999999999996644221110 12467789999999999999999999
Q ss_pred ccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHHHHHHhcCceEEeEEEEecCCCCCC
Q 017363 228 FSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELKAIIERNGCFRIERMDKLPDPPLMR 306 (373)
Q Consensus 228 ~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~ 306 (373)
.+.++.................. .+.. ....+|- +.||.+|+...+++.| |+|++.+.+
T Consensus 173 i~~~~~~~~~~~~~~~p~~~~~~--~~fi----------~kyiFpgg~lps~~~~~~~~e~~g-l~v~~~~~~------- 232 (291)
T d1kpia_ 173 ITIPDKEEAQELGLTSPMSLLRF--IKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVERYHRI------- 232 (291)
T ss_dssp EECCCHHHHHHHTCCCCHHHHHH--HHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEEC-------
T ss_pred EeccCcchhhhccCCCchhhccc--chHH----------HHHhcCCCCCCCHHHHHhhhcccc-cccceeeec-------
Confidence 88764311000000000000000 0111 1223443 7799999999999998 999888765
Q ss_pred CCCCHHHHHHhHHHhhhhHHH
Q 017363 307 LKPSPESVTSQIRAVFEGVVK 327 (373)
Q Consensus 307 ~~~~~~~~~~~iRa~~e~~l~ 327 (373)
+..++.++++|.+.+.+
T Consensus 233 ----~~hYa~TL~~W~~~f~~ 249 (291)
T d1kpia_ 233 ----GANYVPTLNAWADALQA 249 (291)
T ss_dssp ----GGGHHHHHHHHHHHHHH
T ss_pred ----cccHHHHHHHHHHHHHH
Confidence 34456666666655544
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=99.01 E-value=1.6e-09 Score=95.01 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=63.5
Q ss_pred cCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEE
Q 017363 145 GRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIV 224 (373)
Q Consensus 145 ~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv 224 (373)
.--+|++++|+++|+.+|||+. |+..+|+.-++-|+|||+|+
T Consensus 84 ~l~~~~~~fD~I~~~~~l~h~~--------------------------------------d~~~~l~~~~~~L~pgG~l~ 125 (208)
T d1vlma_ 84 NLPLKDESFDFALMVTTICFVD--------------------------------------DPERALKEAYRILKKGGYLI 125 (208)
T ss_dssp BCCSCTTCEEEEEEESCGGGSS--------------------------------------CHHHHHHHHHHHEEEEEEEE
T ss_pred cccccccccccccccccccccc--------------------------------------ccccchhhhhhcCCCCceEE
Confidence 3346889999999999999975 34468888889999999999
Q ss_pred EEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 225 FVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 225 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
+..+...+. ..... ..... ...+.--.+++|.+|+..++++.| |++.++.
T Consensus 126 i~~~~~~~~----------~~~~~--------~~~~~----~~~~~~~~~~~s~~~l~~~l~~~G-f~~i~v~ 175 (208)
T d1vlma_ 126 VGIVDRESF----------LGREY--------EKNKE----KSVFYKNARFFSTEELMDLMRKAG-FEEFKVV 175 (208)
T ss_dssp EEEECSSSH----------HHHHH--------HHTTT----C-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEecCCcch----------hHHhh--------hhccc----cccccccccCCCHHHHHHHHHHcC-CeEEEEE
Confidence 998765421 11111 11110 011122235789999999999999 9866655
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=99.01 E-value=3.3e-09 Score=94.61 Aligned_cols=159 Identities=17% Similarity=0.157 Sum_probs=96.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C---CCCccc-eee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M---PPSRKY-FAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l---~~~~~~-f~~ 137 (373)
..+|+|+|||+|..|+.+.... ..|..+|+--|+...--. ..+. + .....+ +..
T Consensus 40 ~~~vLDlGCGtG~~~~~l~~~~--------------------~~~~~~v~giD~S~~ml~-~A~~~~~~~~~~~~~~~~~ 98 (225)
T d1im8a_ 40 DSNVYDLGCSRGAATLSARRNI--------------------NQPNVKIIGIDNSQPMVE-RCRQHIAAYHSEIPVEILC 98 (225)
T ss_dssp TCEEEEESCTTCHHHHHHHHTC--------------------CCSSCEEEEECSCHHHHH-HHHHHHHTSCCSSCEEEEC
T ss_pred CCEEEEeccchhhHHHHHHHhh--------------------cCCCCceEEeCCCHHHHH-HHHHHhHhhcccchhhhcc
Confidence 4689999999999998773211 134568888888643322 2221 1 111122 222
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+. + .=+|....|+++|++++||++. .|...+|+.-++-|
T Consensus 99 ~d---~--~~~~~~~~d~i~~~~~l~~~~~------------------------------------~d~~~~l~~i~~~L 137 (225)
T d1im8a_ 99 ND---I--RHVEIKNASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGL 137 (225)
T ss_dssp SC---T--TTCCCCSEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHE
T ss_pred ch---h--hccccccceeeEEeeeccccCh------------------------------------hhHHHHHHHHHHhC
Confidence 22 2 1246678899999999999762 26668999999999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhh----cccCcccccCCHHHHHHHHHhcCceE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKV----DSFNIPLYFPTAEELKAIIERNGCFR 292 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~----d~f~~P~y~ps~eE~~~~ie~~gsF~ 292 (373)
+|||.|++.-....+... .-..+...+..+....-.++.+. ..+..-.+..|.+|+...+++.| |+
T Consensus 138 kpgG~li~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~aG-F~ 207 (225)
T d1im8a_ 138 NPNGVLVLSEKFRFEDTK--------INHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVG-FS 207 (225)
T ss_dssp EEEEEEEEEEECCCSSHH--------HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCCHHHHHHHHHHHT-CS
T ss_pred CCCceeecccccccccch--------hhhHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCCHHHHHHHHHHcC-CC
Confidence 999999997665543321 11222333333332222222222 12222234579999999999999 85
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.00 E-value=3.7e-08 Score=91.98 Aligned_cols=118 Identities=12% Similarity=0.180 Sum_probs=74.3
Q ss_pred CCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 150 KSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 150 ~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
++++|-++|-.++..+.. +++..||+..++-|+|||+|++...+
T Consensus 125 ~~~fD~i~si~~~eh~~~------------------------------------~~~~~~~~~~~r~LkpgG~~~l~~i~ 168 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLLHTIT 168 (285)
T ss_dssp CCCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred cccccceeeehhhhhcCc------------------------------------hhHHHHHHHHHhhcCCCCcEEEEEEe
Confidence 367999999999888542 25668999999999999999998887
Q ss_pred CCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCccc-ccCCHHHHHHHHHhcCceEEeEEEEecCCCCCCCC
Q 017363 230 LPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPL-YFPTAEELKAIIERNGCFRIERMDKLPDPPLMRLK 308 (373)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~ps~eE~~~~ie~~gsF~I~~le~~~~~~~~~~~ 308 (373)
..............-++. .... +. +....+|- ..||.+++...++..| |+|+..+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~-~~~~-~f----------i~kyiFpgg~lPsl~~~~~~~e~ag-f~v~~~~~~--------- 226 (285)
T d1kpga_ 169 GLHPKEIHERGLPMSFTF-ARFL-KF----------IVTEIFPGGRLPSIPMVQECASANG-FTVTRVQSL--------- 226 (285)
T ss_dssp ECCHHHHTTTTCSCHHHH-HHHH-HH----------HHHHTSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC---------
T ss_pred ccCchhhccccCCcchhh-hchh-hH----------HHHHhccCCCCCChhhHHHHHHHhc-hhhcccccc---------
Confidence 432211000000001111 1100 11 11112222 5699999999999999 999887744
Q ss_pred CCHHHHHHhHHHhhhhHHH
Q 017363 309 PSPESVTSQIRAVFEGVVK 327 (373)
Q Consensus 309 ~~~~~~~~~iRa~~e~~l~ 327 (373)
++.++.+++.|.+.+-+
T Consensus 227 --~~hYarTl~~W~~~f~~ 243 (285)
T d1kpga_ 227 --QPHYAKTLDLWSAALQA 243 (285)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHHHHH
Confidence 46677777777665554
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.3e-09 Score=100.37 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=72.5
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
++.+...-++++++|+|.|+++|||++.-+ .|+..+|+.-++-|||
T Consensus 145 ~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~~~~~LkP 190 (263)
T d2g72a1 145 PQPLGAGSPAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRP 190 (263)
T ss_dssp SSTTCSSCSSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEE
T ss_pred CCccccCCcCcCccCeeeeHHHHHHHccCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 344555566778999999999999986433 2566899999999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||+|++......+... + ..-.++.++.|.+|+++++++.| |+|..++..
T Consensus 191 GG~li~~~~~~~~~~~--------------------~----------~~~~~~~~~~t~e~v~~~l~~aG-f~v~~~~~~ 239 (263)
T d2g72a1 191 GGHLLLIGALEESWYL--------------------A----------GEARLTVVPVSEEEVREALVRSG-YKVRDLRTY 239 (263)
T ss_dssp EEEEEEEEEESCCEEE--------------------E----------TTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCEEEEecccCCcccc--------------------c----------CCcccccCCCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 9999998765432211 0 11124568889999999999999 999998866
Q ss_pred c
Q 017363 300 P 300 (373)
Q Consensus 300 ~ 300 (373)
.
T Consensus 240 ~ 240 (263)
T d2g72a1 240 I 240 (263)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=98.96 E-value=2.6e-09 Score=97.52 Aligned_cols=159 Identities=18% Similarity=0.135 Sum_probs=97.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-Cccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gv 139 (373)
.+.-+|+|+|||+|..++.+.+ + -|.+++..-|+|. .-...=+.+.. .-.--+.-+
T Consensus 79 ~~~~~VLDvGcG~G~~~~~la~--------~--------------~p~~~~~~~D~~~-~~~~a~~~~~~~~~~~rv~~~ 135 (253)
T d1tw3a2 79 TNVRHVLDVGGGKGGFAAAIAR--------R--------------APHVSATVLEMAG-TVDTARSYLKDEGLSDRVDVV 135 (253)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H--------------CTTCEEEEEECTT-HHHHHHHHHHHTTCTTTEEEE
T ss_pred ccCCEEEEeCCCCCHHHHHHHH--------h--------------cceeEEEEccCHH-HHHHHHHHHHHhhcccchhhc
Confidence 3457999999999999888732 2 2345778888873 11111111111 001113345
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+|+|++. .| .+.|+++++++||.++. .+...+|+.-++-|+|
T Consensus 136 ~~D~~~~-~~-~~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~LkP 177 (253)
T d1tw3a2 136 EGDFFEP-LP-RKADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEALEP 177 (253)
T ss_dssp ECCTTSC-CS-SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEE
T ss_pred cccchhh-cc-cchhheeeccccccCCc------------------------------------hhhHHHHHHHHHhcCC
Confidence 5677763 34 56999999999997542 1334688888999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++.-....+... .......+. +.-|+.-|- ..||.+|+++++++.| |++.++..+
T Consensus 178 GG~l~i~e~~~~~~~~-----~~~~~~~~d--l~~~~~~~g-------------~~rt~~e~~~ll~~AG-f~~~~v~~~ 236 (253)
T d1tw3a2 178 GGRILIHERDDLHENS-----FNEQFTELD--LRMLVFLGG-------------ALRTREKWDGLAASAG-LVVEEVRQL 236 (253)
T ss_dssp EEEEEEEECCBCGGGC-----CSHHHHHHH--HHHHHHHSC-------------CCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CcEEEEEeccCCCCCc-----chhHHHHhh--HHHHhhCCC-------------cCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 9999987543222111 011111111 122232222 4579999999999999 999888766
Q ss_pred cC
Q 017363 300 PD 301 (373)
Q Consensus 300 ~~ 301 (373)
..
T Consensus 237 ~~ 238 (253)
T d1tw3a2 237 PS 238 (253)
T ss_dssp EC
T ss_pred CC
Confidence 43
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=7.4e-09 Score=93.46 Aligned_cols=146 Identities=12% Similarity=0.005 Sum_probs=93.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc----CCC-Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT----MPP-SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~----l~~-~~~~f~~ 137 (373)
.-+|+|+|||+|..++.+ .+++ ...|+--|+...- -.+.+. ... .+--|..
T Consensus 34 g~~VLDiGCG~G~~~~~l--------a~~~---------------~~~v~GvD~s~~~-~~~ar~~~~~~gl~~~v~~~~ 89 (245)
T d1nkva_ 34 GTRILDLGSGSGEMLCTW--------ARDH---------------GITGTGIDMSSLF-TAQAKRRAEELGVSERVHFIH 89 (245)
T ss_dssp TCEEEEETCTTCHHHHHH--------HHHT---------------CCEEEEEESCHHH-HHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEcCCCCHHHHHH--------HHhc---------------CCEEEEEecccch-hhHHHHHHHHhhccccchhhh
Confidence 368999999999887765 2221 1256666774322 122222 111 2224655
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. ..++|++++|+++|..++||+.. +..+|+.-.+-|
T Consensus 90 ~d~----~~~~~~~~fD~v~~~~~~~~~~d--------------------------------------~~~~l~~~~r~L 127 (245)
T d1nkva_ 90 NDA----AGYVANEKCDVAACVGATWIAGG--------------------------------------FAGAEELLAQSL 127 (245)
T ss_dssp SCC----TTCCCSSCEEEEEEESCGGGTSS--------------------------------------SHHHHHHHTTSE
T ss_pred hHH----hhccccCceeEEEEEehhhccCC--------------------------------------HHHHHHHHHHHc
Confidence 544 44689999999999999999763 336888888999
Q ss_pred ccCCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 218 VPGGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 218 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
||||++++...+....... +.+. ...- ..-+.-+.+..++...+++.| |++..+.
T Consensus 128 kPGG~l~i~~~~~~~~~~~---------~~~~--------~~~~-------~~~~~~~~~~~~~~~~~~~aG-~~~v~~~ 182 (245)
T d1nkva_ 128 KPGGIMLIGEPYWRQLPAT---------EEIA--------QACG-------VSSTSDFLTLPGLVGAFDDLG-YDVVEMV 182 (245)
T ss_dssp EEEEEEEEEEEEETTCCSS---------HHHH--------HTTT-------CSCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred CcCcEEEEEeccccCCCCh---------HHHH--------HHhc-------cCCCcccCCHHHHHHHHHHcC-CEEEEEE
Confidence 9999999998775543221 1111 1110 011223568899999999999 8876665
Q ss_pred Ee
Q 017363 298 KL 299 (373)
Q Consensus 298 ~~ 299 (373)
..
T Consensus 183 ~~ 184 (245)
T d1nkva_ 183 LA 184 (245)
T ss_dssp EC
T ss_pred eC
Confidence 44
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.78 E-value=3.4e-08 Score=84.35 Aligned_cols=80 Identities=5% Similarity=0.052 Sum_probs=60.1
Q ss_pred CCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEEec
Q 017363 149 PKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFVLF 228 (373)
Q Consensus 149 P~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 228 (373)
+..++|+++|+.++||++. .++..+++.-++-|||||++++...
T Consensus 96 ~~~~~D~i~~~~~l~~l~~------------------------------------~~~~~~~~~i~~~LkpgG~l~l~~~ 139 (201)
T d1pjza_ 96 DIGHCAAFYDRAAMIALPA------------------------------------DMRERYVQHLEALMPQACSGLLITL 139 (201)
T ss_dssp HHHSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred cccceeEEEEEeeeEecch------------------------------------hhhHHHHHHHHHhcCCCcEEEEEEc
Confidence 4568999999999999762 1455788899999999999998877
Q ss_pred cCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 229 SLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 229 g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
......+ .-|.|..+.+|+++++. .+ |+|+.++...
T Consensus 140 ~~~~~~~----------------------------------~~p~~~~~~~el~~l~~-~~-~~i~~~~~~~ 175 (201)
T d1pjza_ 140 EYDQALL----------------------------------EGPPFSVPQTWLHRVMS-GN-WEVTKVGGQD 175 (201)
T ss_dssp SSCSSSS----------------------------------SSCCCCCCHHHHHHTSC-SS-EEEEEEEESS
T ss_pred ccccccC----------------------------------CCccccCCHHHHHHHhC-CC-cEEEEEEEec
Confidence 6543321 12557778999998875 34 8888777554
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.77 E-value=1.6e-08 Score=92.65 Aligned_cols=158 Identities=17% Similarity=0.146 Sum_probs=95.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCc--hhhHhhcCCCCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGND--FNTLFQTMPPSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~ND--Fn~lf~~l~~~~~~f~~gv 139 (373)
..-+|+|+|||+|..+..+. ++ .|.++++.-|+|..- ....+...+.... +.-+
T Consensus 81 ~~~~vlDvG~G~G~~~~~l~--------~~--------------~P~~~~~~~Dlp~~~~~a~~~~~~~~~~~r--i~~~ 136 (256)
T d1qzza2 81 AVRHVLDVGGGNGGMLAAIA--------LR--------------APHLRGTLVELAGPAERARRRFADAGLADR--VTVA 136 (256)
T ss_dssp TCCEEEEETCTTSHHHHHHH--------HH--------------CTTCEEEEEECHHHHHHHHHHHHHTTCTTT--EEEE
T ss_pred cCCEEEEECCCCCHHHHHHH--------Hh--------------hcCcEEEEecChHHHHHHHHHHhhcCCcce--eeee
Confidence 45689999999998877773 22 245578888998411 1111112111112 3345
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
+|.|+..+ | .+.|++++.+.||-++. ++...+|+.-++-|+|
T Consensus 137 ~~d~~~~~-p-~~~D~v~~~~vLh~~~d------------------------------------~~~~~lL~~i~~~Lkp 178 (256)
T d1qzza2 137 EGDFFKPL-P-VTADVVLLSFVLLNWSD------------------------------------EDALTILRGCVRALEP 178 (256)
T ss_dssp ECCTTSCC-S-CCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred eeeccccc-c-ccchhhhccccccccCc------------------------------------HHHHHHHHHHHhhcCC
Confidence 66777643 4 45899999999984331 1344789999999999
Q ss_pred CCeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 220 GGLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 220 GG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
||++++.=.-..+... ....+..+.+ +.-|+.-|- ..+|.+|+++++++.| |++.+....
T Consensus 179 gG~llI~d~~~~~~~~-----~~~~~~~~~d-~~ml~~~~g-------------~~rt~~e~~~ll~~AG-f~~~~~~~~ 238 (256)
T d1qzza2 179 GGRLLVLDRADVEGDG-----ADRFFSTLLD-LRMLTFMGG-------------RVRTRDEVVDLAGSAG-LALASERTS 238 (256)
T ss_dssp EEEEEEEECCH------------HHHHHHHH-HHHHHHHSC-------------CCCCHHHHHHHHHTTT-EEEEEEEEE
T ss_pred cceeEEEEeccCCCCc-----ccHHHHHHHH-HHHHhhCCC-------------ccCCHHHHHHHHHHCC-CceeEEEEe
Confidence 9999986432221111 1112222211 111222221 4579999999999999 998887766
Q ss_pred cC
Q 017363 300 PD 301 (373)
Q Consensus 300 ~~ 301 (373)
.+
T Consensus 239 ~~ 240 (256)
T d1qzza2 239 GS 240 (256)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.75 E-value=1e-07 Score=88.13 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=66.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhh---HhhcCCCCccceee
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNT---LFQTMPPSRKYFAF 137 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~---lf~~l~~~~~~f~~ 137 (373)
.++.+|+|+|||+|..+..+.. .+ +....|+--|+..+-... .+...+. +.-|..
T Consensus 26 ~~~~~ILDiGcG~G~~~~~la~--------~~-------------~~~~~v~giD~s~~~l~~a~~~~~~~~~-~~~f~~ 83 (281)
T d2gh1a1 26 TKPVHIVDYGCGYGYLGLVLMP--------LL-------------PEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLE 83 (281)
T ss_dssp CSCCEEEEETCTTTHHHHHHTT--------TS-------------CTTCEEEEEECCHHHHHHHHHHHHSSSS-EEEEEE
T ss_pred CCcCEEEEecCcCCHHHHHHHH--------hC-------------CCCCEEEEEecchhHhhhhhcccccccc-cccccc
Confidence 4678999999999988877621 11 111256666764322111 1222221 223444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. . .+-+++++|+|+|+.++||++. ...+|+.-.+-|
T Consensus 84 ~d~---~-~~~~~~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~~~L 121 (281)
T d2gh1a1 84 GDA---T-EIELNDKYDIAICHAFLLHMTT--------------------------------------PETMLQKMIHSV 121 (281)
T ss_dssp SCT---T-TCCCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTE
T ss_pred ccc---c-cccccCCceEEEEehhhhcCCC--------------------------------------HHHHHHHHHHHc
Confidence 433 2 3334578999999999999763 336778888999
Q ss_pred ccCCeEEEEec
Q 017363 218 VPGGLIVFVLF 228 (373)
Q Consensus 218 ~pGG~lvl~~~ 228 (373)
||||++++.-+
T Consensus 122 kpgG~lii~~~ 132 (281)
T d2gh1a1 122 KKGGKIICFEP 132 (281)
T ss_dssp EEEEEEEEEEC
T ss_pred CcCcEEEEEEC
Confidence 99999998764
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.74 E-value=1e-08 Score=92.27 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=66.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
++-+|+|+|||+|..|+.+.. + -.+|+--|+..+--...-+..+ ..+--|..+.
T Consensus 37 ~~~~vLDiGCG~G~~~~~l~~--------~----------------g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d 92 (246)
T d1y8ca_ 37 VFDDYLDLACGTGNLTENLCP--------K----------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGG--------G----------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred CCCeEEEEeCcCCHHHHHHHH--------h----------------CCccEeeccchhhhhhccccccccCccceeeccc
Confidence 356899999999999887731 1 0145566665432221111111 1112244443
Q ss_pred CcccccCCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 140 PGSFHGRLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
-.+ +-+++++|+|+|. .+++|+.... |+..+|+.-++-|+
T Consensus 93 ~~~----~~~~~~fD~i~~~~~~~~~~~~~~-----------------------------------~~~~~l~~~~~~Lk 133 (246)
T d1y8ca_ 93 ISN----LNINRKFDLITCCLDSTNYIIDSD-----------------------------------DLKKYFKAVSNHLK 133 (246)
T ss_dssp GGG----CCCSCCEEEEEECTTGGGGCCSHH-----------------------------------HHHHHHHHHHTTEE
T ss_pred hhh----hcccccccccceeeeeeeccCCHH-----------------------------------HHHHHHHHHHHhCC
Confidence 322 2346789999986 6788876432 77789999999999
Q ss_pred cCCeEEEEec
Q 017363 219 PGGLIVFVLF 228 (373)
Q Consensus 219 pGG~lvl~~~ 228 (373)
|||+|++.+.
T Consensus 134 pgG~~i~~~~ 143 (246)
T d1y8ca_ 134 EGGVFIFDIN 143 (246)
T ss_dssp EEEEEEEEEE
T ss_pred CCeEEEEEeC
Confidence 9999998764
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.73 E-value=9.6e-08 Score=85.02 Aligned_cols=155 Identities=11% Similarity=0.034 Sum_probs=87.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCcc
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPGS 142 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpgS 142 (373)
.-+|+|+|||+|..+..+.+. -. .|+--|+.. +.-...+.-...+--|..+.
T Consensus 21 ~~~VLDiGcG~G~~~~~l~~~----------------------g~--~v~giD~s~-~~i~~a~~~~~~~~~~~~~~--- 72 (225)
T d2p7ia1 21 PGNLLELGSFKGDFTSRLQEH----------------------FN--DITCVEASE-EAISHAQGRLKDGITYIHSR--- 72 (225)
T ss_dssp SSCEEEESCTTSHHHHHHTTT----------------------CS--CEEEEESCH-HHHHHHHHHSCSCEEEEESC---
T ss_pred CCcEEEEeCCCcHHHHHHHHc----------------------CC--eEEEEeCcH-HHhhhhhccccccccccccc---
Confidence 347999999999999877211 01 355556532 22222232111222233333
Q ss_pred cccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHH-HhhhccCC
Q 017363 143 FHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNAR-AHELVPGG 221 (373)
Q Consensus 143 Fy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~R-a~EL~pGG 221 (373)
+ +.+.+++++|++++...|||+.... .+|+.- .+-|+|||
T Consensus 73 ~-~~~~~~~~fD~I~~~~vleh~~d~~--------------------------------------~~l~~i~~~~Lk~gG 113 (225)
T d2p7ia1 73 F-EDAQLPRRYDNIVLTHVLEHIDDPV--------------------------------------ALLKRINDDWLAEGG 113 (225)
T ss_dssp G-GGCCCSSCEEEEEEESCGGGCSSHH--------------------------------------HHHHHHHHTTEEEEE
T ss_pred c-cccccccccccccccceeEecCCHH--------------------------------------HHHHHHHHHhcCCCc
Confidence 2 3345678999999999999986432 455443 36799999
Q ss_pred eEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHh-hcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEe
Q 017363 222 LIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMT-TKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKL 299 (373)
Q Consensus 222 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~ 299 (373)
.+++.++.... ++..+.. +..+. .....++... ..--....+.++++..+++.| |+|.+.+.+
T Consensus 114 ~l~i~~pn~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~--~~~h~~~~~~~~l~~~l~~~G-f~i~~~~~~ 177 (225)
T d2p7ia1 114 RLFLVCPNANA-----------VSRQIAV-KMGIISHNSAVTEAEF--AHGHRCTYALDTLERDASRAG-LQVTYRSGI 177 (225)
T ss_dssp EEEEEEECTTC-----------HHHHHHH-HTTSSSSTTCCCHHHH--HTTCCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred eEEEEeCCccc-----------HHHHHHH-HhhhhhhhhhcCcccc--ceeeeeccCHHHHHHHHHHCC-CEEEEEEEE
Confidence 99999875332 1111111 11110 0111111111 111123458999999999999 999887743
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=1.8e-07 Score=83.54 Aligned_cols=82 Identities=10% Similarity=0.105 Sum_probs=62.8
Q ss_pred CCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEEE
Q 017363 147 LFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 147 lfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
..+.+++|++++..++|.+.. .+...+++.-++-|+|||++++.
T Consensus 124 ~~~~~~fd~i~~~~~l~~~~~------------------------------------~~r~~~~~~~~~~LkpgG~~~l~ 167 (229)
T d2bzga1 124 RTNIGKFDMIWDRGALVAINP------------------------------------GDRKCYADTMFSLLGKKFQYLLC 167 (229)
T ss_dssp GSCCCCEEEEEESSSTTTSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccCceeEEEEEEEEEeccc------------------------------------hhhHHHHHHHHhhcCCcceEEEE
Confidence 457789999999999999752 14446788888999999999999
Q ss_pred eccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEEEec
Q 017363 227 LFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMDKLP 300 (373)
Q Consensus 227 ~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le~~~ 300 (373)
.+..+.... .-|.|+.|.+|++.++.. + |+|+.+|..+
T Consensus 168 ~~~~~~~~~----------------------------------~gpp~~~~~~el~~lf~~-~-~~i~~le~~~ 205 (229)
T d2bzga1 168 VLSYDPTKH----------------------------------PGPPFYVPHAEIERLFGK-I-CNIRCLEKVD 205 (229)
T ss_dssp EEECCTTTC----------------------------------CCSSCCCCHHHHHHHHTT-T-EEEEEEEEEE
T ss_pred EcccCCCCC----------------------------------CCCCCCCCHHHHHHHhcC-C-CEEEEEEEec
Confidence 887653211 124577899999999964 4 9998888664
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.70 E-value=2.6e-08 Score=87.03 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=66.7
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeeccC
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGVP 140 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gvp 140 (373)
-+|+|+|||+|.+++.+.+.- .+|+--|+..+--..+=+.. .-..-.+..+..
T Consensus 32 grvLDiGcG~G~~~~~la~~g------------------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~ 87 (198)
T d2i6ga1 32 GRTLDLGCGNGRNSLYLAANG------------------------YDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL 87 (198)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------------------CEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT
T ss_pred CcEEEECCCCCHHHHHHHHHh------------------------hhhccccCcHHHHHHHHHHhhhccccchhhhheec
Confidence 489999999999999874210 14555555433222211111 001111222222
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
..+.|++++|+++|+.++|++.. .++..+|+.-++-|+||
T Consensus 88 ----~~~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~pg 127 (198)
T d2i6ga1 88 ----NTLTFDGEYDFILSTVVMMFLEA------------------------------------QTIPGLIANMQRCTKPG 127 (198)
T ss_dssp ----TTCCCCCCEEEEEEESCGGGSCT------------------------------------THHHHHHHHHHHTEEEE
T ss_pred ----ccccccccccEEEEeeeeecCCH------------------------------------HHHHHHHHHHHHHcCCC
Confidence 45567899999999999999642 14557999999999999
Q ss_pred CeEEEEeccCC
Q 017363 221 GLIVFVLFSLP 231 (373)
Q Consensus 221 G~lvl~~~g~~ 231 (373)
|++++..+...
T Consensus 128 G~~~~~~~~~~ 138 (198)
T d2i6ga1 128 GYNLIVAAMDT 138 (198)
T ss_dssp EEEEEEEEBC-
T ss_pred cEEEEEEecCC
Confidence 99999877643
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.67 E-value=1.1e-07 Score=85.11 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=65.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeecc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFGV 139 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~gv 139 (373)
+.-+|+|+|||+|..|+.+.+. . .+|+..|+..+--...=+..+ ..+--|..+.
T Consensus 41 ~~~~iLDiGcGtG~~~~~l~~~----------------------~--~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d 96 (251)
T d1wzna1 41 EVRRVLDLACGTGIPTLELAER----------------------G--YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD 96 (251)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT----------------------T--CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCCEEEEeCCCCCccchhhccc----------------------c--eEEEEEeeccccccccccccccccccchheehh
Confidence 4569999999999988876321 0 145555555322111111111 0112244444
Q ss_pred CcccccCCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhc
Q 017363 140 PGSFHGRLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELV 218 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 218 (373)
- ..+-+++++|+++|. .++||++ .+ |+..+|+..++-|+
T Consensus 97 ~----~~l~~~~~fD~I~~~~~~~~~~~-~~-----------------------------------~~~~~L~~~~~~Lk 136 (251)
T d1wzna1 97 V----LEIAFKNEFDAVTMFFSTIMYFD-EE-----------------------------------DLRKLFSKVAEALK 136 (251)
T ss_dssp G----GGCCCCSCEEEEEECSSGGGGSC-HH-----------------------------------HHHHHHHHHHHHEE
T ss_pred h----hhcccccccchHhhhhhhhhcCC-hH-----------------------------------HHHHHHHHHHHHcC
Confidence 3 344456799999986 6888875 22 56689999999999
Q ss_pred cCCeEEEEecc
Q 017363 219 PGGLIVFVLFS 229 (373)
Q Consensus 219 pGG~lvl~~~g 229 (373)
|||++++.+..
T Consensus 137 pgG~lii~~~~ 147 (251)
T d1wzna1 137 PGGVFITDFPC 147 (251)
T ss_dssp EEEEEEEEEEC
T ss_pred CCcEEEEEecc
Confidence 99999998754
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.63 E-value=3.8e-07 Score=83.03 Aligned_cols=151 Identities=19% Similarity=0.179 Sum_probs=95.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
++.-+|+|+|||+|..++.+ .++ .|+++++.-|||. . ...-..... +..++
T Consensus 80 ~~~~~vlDiGGG~G~~~~~l--------~~~--------------~P~l~~~v~Dlp~----v-i~~~~~~~r--i~~~~ 130 (244)
T d1fp1d2 80 EGISTLVDVGGGSGRNLELI--------ISK--------------YPLIKGINFDLPQ----V-IENAPPLSG--IEHVG 130 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHH--------HHH--------------CTTCEEEEEECHH----H-HTTCCCCTT--EEEEE
T ss_pred cCCcEEEEecCCCcHHHHHH--------HHH--------------CCCCeEEEecchh----h-hhccCCCCC--eEEec
Confidence 45679999999999988877 222 2556888889984 2 222221112 34467
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
|+|++.+ |.. |+++.+..||..+. ++-.+.|+.-++.|+||
T Consensus 131 gd~~~~~-p~~--D~~~l~~vLh~~~d------------------------------------e~~~~iL~~~~~aL~pg 171 (244)
T d1fp1d2 131 GDMFASV-PQG--DAMILKAVCHNWSD------------------------------------EKCIEFLSNCHKALSPN 171 (244)
T ss_dssp CCTTTCC-CCE--EEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred CCccccc-ccc--eEEEEehhhhhCCH------------------------------------HHHHHHHHHHHHHcCCC
Confidence 8898764 533 99999999996442 13336899999999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|++++.=.-.++.... .....+...-+..+-+...| -.||.+|+++++++.| |+..++.
T Consensus 172 g~llI~e~v~~~~~~~---~~~~~~~~~~d~~m~~~~~g--------------~ert~~e~~~ll~~AG-F~~v~v~ 230 (244)
T d1fp1d2 172 GKVIIVEFILPEEPNT---SEESKLVSTLDNLMFITVGG--------------RERTEKQYEKLSKLSG-FSKFQVA 230 (244)
T ss_dssp EEEEEEEEEECSSCCS---SHHHHHHHHHHHHHHHHHSC--------------CCEEHHHHHHHHHHTT-CSEEEEE
T ss_pred cEEEEEEEEecCCCCC---chHHHHHHHHHHHHHhhCCC--------------cCCCHHHHHHHHHHcC-CCceEEE
Confidence 9998877654433211 00111111111111112234 3578999999999999 8765543
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.62 E-value=5.3e-08 Score=86.35 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=64.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+..+|+|+|||+|..+..+.+ . -.+|+-.|+...-- ...+.- ....++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~--------~----------------~~~v~giD~s~~~l-~~a~~~--~~~~~~~~--- 91 (246)
T d2avna1 42 NPCRVLDLGGGTGKWSLFLQE--------R----------------GFEVVLVDPSKEML-EVAREK--GVKNVVEA--- 91 (246)
T ss_dssp SCCEEEEETCTTCHHHHHHHT--------T----------------TCEEEEEESCHHHH-HHHHHH--TCSCEEEC---
T ss_pred CCCEEEEECCCCchhcccccc--------c----------------ceEEEEeecccccc-cccccc--cccccccc---
Confidence 356899999999999987721 1 11566666653221 111110 11223332
Q ss_pred ccccCCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+..+--+|++++|+++|. ..+||+. |...+|+.-.+-||||
T Consensus 92 ~~~~l~~~~~~fD~ii~~~~~~~~~~--------------------------------------d~~~~l~~i~r~Lk~g 133 (246)
T d2avna1 92 KAEDLPFPSGAFEAVLALGDVLSYVE--------------------------------------NKDKAFSEIRRVLVPD 133 (246)
T ss_dssp CTTSCCSCTTCEEEEEECSSHHHHCS--------------------------------------CHHHHHHHHHHHEEEE
T ss_pred cccccccccccccceeeecchhhhhh--------------------------------------hHHHHHHHHHhhcCcC
Confidence 333434789999999986 5789965 4446888888999999
Q ss_pred CeEEEEec
Q 017363 221 GLIVFVLF 228 (373)
Q Consensus 221 G~lvl~~~ 228 (373)
|++++.+.
T Consensus 134 G~~ii~~~ 141 (246)
T d2avna1 134 GLLIATVD 141 (246)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEC
Confidence 99999885
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.61 E-value=2.3e-07 Score=83.91 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHh---hcCCCC-ccceee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLF---QTMPPS-RKYFAF 137 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf---~~l~~~-~~~f~~ 137 (373)
+.-+|+|+|||+|..+..+... . . -+|+--|+...--...- +.+... +..|..
T Consensus 24 ~~~~VLDlGCG~G~~~~~~~~~-------~--------------~--~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~ 80 (252)
T d1ri5a_ 24 RGDSVLDLGCGKGGDLLKYERA-------G--------------I--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRA 80 (252)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-------T--------------C--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred CcCEEEEecccCcHHHHHHHHc-------C--------------C--CeEEEecCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3468999999999887765311 0 0 04555565543322221 111111 122444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+.. +-..+.+.+++|+|+|..++||+-..+ +|+..+|+.-++-|
T Consensus 81 ~D~--~~~~~~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~i~~~L 124 (252)
T d1ri5a_ 81 QDS--YGRHMDLGKEFDVISSQFSFHYAFSTS----------------------------------ESLDIAQRNIARHL 124 (252)
T ss_dssp SCT--TTSCCCCSSCEEEEEEESCGGGGGSSH----------------------------------HHHHHHHHHHHHTE
T ss_pred cch--hhhcccccccceEEEEcceeeecCCCH----------------------------------HHHHHHHHHHhcee
Confidence 432 112334678999999999999964322 46778999999999
Q ss_pred ccCCeEEEEecc
Q 017363 218 VPGGLIVFVLFS 229 (373)
Q Consensus 218 ~pGG~lvl~~~g 229 (373)
+|||+|+++++.
T Consensus 125 k~gG~~i~~~~~ 136 (252)
T d1ri5a_ 125 RPGGYFIMTVPS 136 (252)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCCEEEEEecC
Confidence 999999998753
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.38 E-value=2.4e-06 Score=77.46 Aligned_cols=150 Identities=15% Similarity=0.136 Sum_probs=94.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
.+.-+|+|+|||+|..++.+ .++ -|+++++.-|||. .....+...+ +..++
T Consensus 79 ~~~~~vvDvGGG~G~~~~~l--------~~~--------------~P~l~~~v~Dlp~-----vi~~~~~~~r--v~~~~ 129 (244)
T d1fp2a2 79 DGLESIVDVGGGTGTTAKII--------CET--------------FPKLKCIVFDRPQ-----VVENLSGSNN--LTYVG 129 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHH--------HHH--------------CTTCEEEEEECHH-----HHTTCCCBTT--EEEEE
T ss_pred cCceEEEEecCCccHHHHHH--------HHh--------------CCCCeEEEecCHH-----HHHhCcccCc--eEEEe
Confidence 34578999999999988776 333 2556899999983 3333333233 44577
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
|.|++.. | ..|+++..+.||..+. ++-.++|+..++.|+||
T Consensus 130 gD~f~~~-p--~aD~~~l~~vLHdw~d------------------------------------~~~~~iL~~~~~al~pg 170 (244)
T d1fp2a2 130 GDMFTSI-P--NADAVLLKYILHNWTD------------------------------------KDCLRILKKCKEAVTND 170 (244)
T ss_dssp CCTTTCC-C--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHSGG
T ss_pred cCcccCC-C--CCcEEEEEeecccCCh------------------------------------HHHHHHHHHHHHHcCcc
Confidence 8898753 4 4699999999995442 13347899999999999
Q ss_pred ---CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhhcCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 221 ---GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTTKGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 221 ---G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|++++.=.-.++.... .....+..+.+ +.-|+-.| -.||.+|+++++++.| |++.++.
T Consensus 171 g~~~~lli~e~~~~~~~~~---~~~~~~~~~~d-l~m~~~~G--------------~ert~~e~~~ll~~AG-f~~~~i~ 231 (244)
T d1fp2a2 171 GKRGKVTIIDMVIDKKKDE---NQVTQIKLLMD-VNMACLNG--------------KERNEEEWKKLFIEAG-FQHYKIS 231 (244)
T ss_dssp GCCCEEEEEECEECTTTSC---HHHHHHHHHHH-HHGGGGTC--------------CCEEHHHHHHHHHHTT-CCEEEEE
T ss_pred cCCcEEEEEEeecCCCCCC---chHHHHHHHHH-HHHHhCCC--------------cCCCHHHHHHHHHHcC-CceEEEE
Confidence 5565554332222110 00011122211 11123334 4689999999999999 9877654
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.34 E-value=6.5e-06 Score=74.28 Aligned_cols=148 Identities=18% Similarity=0.135 Sum_probs=90.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccCc
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVPG 141 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvpg 141 (373)
+.-+|+|+|||+|..++.++ ++ -|.++++.-|||.- ........ =+..++|
T Consensus 81 ~~~~vvDvGGG~G~~~~~l~--------~~--------------~P~l~~~v~Dlp~v-----i~~~~~~~--r~~~~~~ 131 (243)
T d1kyza2 81 GLKSLVDVGGGTGAVINTIV--------SK--------------YPTIKGINFDLPHV-----IEDAPSYP--GVEHVGG 131 (243)
T ss_dssp SCSEEEEETCTTSHHHHHHH--------HH--------------CTTSEEEEEECTTT-----TTTCCCCT--TEEEEEC
T ss_pred CCcEEEEecCCCcHHHHHHH--------HH--------------CCCCeEEEcccHHh-----hhhcccCC--ceEEecc
Confidence 45789999999999988873 33 24568888999962 11111111 2445678
Q ss_pred ccccCCCCCCcceEEEccCccc-ccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLN-WLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alH-WLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
.|++. .|.. |+.+-.+.|| | + .+|...+|+.-++.|+||
T Consensus 132 d~~~~-~P~a--d~~~l~~vlh~~-~------------------------------------d~~~~~iL~~~~~al~pg 171 (243)
T d1kyza2 132 DMFVS-IPKA--DAVFMKWICHDW-S------------------------------------DEHCLKFLKNCYEALPDN 171 (243)
T ss_dssp CTTTC-CCCC--SCEECSSSSTTS-C------------------------------------HHHHHHHHHHHHHHCCSS
T ss_pred ccccc-CCCc--ceEEEEEEeecC-C------------------------------------HHHHHHHHHHHHHhcCCC
Confidence 88876 4654 4445555666 4 2 124557899999999999
Q ss_pred CeEEEEeccCCCCCCccCCCchhHHHHHHHHHHHHhh--cCCCChhhhcccCcccccCCHHHHHHHHHhcCceEEeEEE
Q 017363 221 GLIVFVLFSLPNGVPMIDSNGGKLYGFLGSCLIDMTT--KGLIDEEKVDSFNIPLYFPTAEELKAIIERNGCFRIERMD 297 (373)
Q Consensus 221 G~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~mv~--eGli~~e~~d~f~~P~y~ps~eE~~~~ie~~gsF~I~~le 297 (373)
|++++.=.-.++.... ........ ...+.-|+. .| ..||.+|+++++++.| |+..++.
T Consensus 172 g~~li~d~~~~~~~~~---~~~~~~~~-~~d~~ml~~~~~g--------------~ert~~e~~~ll~~AG-f~~vkv~ 231 (243)
T d1kyza2 172 GKVIVAECILPVAPDS---SLATKGVV-HIDVIMLAHNPGG--------------KERTQKEFEDLAKGAG-FQGFKVH 231 (243)
T ss_dssp SCEEEEECEECSSCCC---CHHHHHHH-HHHHHHHHHCSSC--------------CCEEHHHHHHHHHHHC-CSCEEEE
T ss_pred ceEEEEEEEecCCCCC---chhhHHHH-HHHHHHHhhCCCC--------------CcCCHHHHHHHHHHcC-CCcEEEE
Confidence 9998874432221110 00111111 111222332 34 4589999999999999 8876654
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.25 E-value=5.6e-07 Score=82.48 Aligned_cols=100 Identities=18% Similarity=0.147 Sum_probs=65.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCCCccceeeccC
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPPSRKYFAFGVP 140 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~~~~~f~~gvp 140 (373)
.+..+|+|+|||+|..+..+. +. .|..+++-.|+...--...-+..+ +-.|..+
T Consensus 83 ~~~~~iLDiGcG~G~~~~~l~--------~~--------------~~~~~~~giD~s~~~~~~a~~~~~--~~~~~~~-- 136 (268)
T d1p91a_ 83 DKATAVLDIGCGEGYYTHAFA--------DA--------------LPEITTFGLDVSKVAIKAAAKRYP--QVTFCVA-- 136 (268)
T ss_dssp TTCCEEEEETCTTSTTHHHHH--------HT--------------CTTSEEEEEESCHHHHHHHHHHCT--TSEEEEC--
T ss_pred CCCCEEEEeCCCCcHHHHHHH--------HH--------------CCCCEEEEecchHhhhhhhhcccc--cccceee--
Confidence 457899999999999998772 22 123466777775432222112222 2234443
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+...--||++|+|++++..++||+.. -++-||||
T Consensus 137 -d~~~l~~~~~sfD~v~~~~~~~~~~e---------------------------------------------~~rvLkpg 170 (268)
T d1p91a_ 137 -SSHRLPFSDTSMDAIIRIYAPCKAEE---------------------------------------------LARVVKPG 170 (268)
T ss_dssp -CTTSCSBCTTCEEEEEEESCCCCHHH---------------------------------------------HHHHEEEE
T ss_pred -ehhhccCCCCCEEEEeecCCHHHHHH---------------------------------------------HHHHhCCC
Confidence 34555679999999999888877431 12459999
Q ss_pred CeEEEEeccCCC
Q 017363 221 GLIVFVLFSLPN 232 (373)
Q Consensus 221 G~lvl~~~g~~~ 232 (373)
|+|+++.++.+.
T Consensus 171 G~l~~~~p~~~~ 182 (268)
T d1p91a_ 171 GWVITATPGPRH 182 (268)
T ss_dssp EEEEEEEECTTT
T ss_pred cEEEEEeeCCcc
Confidence 999999998654
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.18 E-value=2.1e-06 Score=80.79 Aligned_cols=99 Identities=21% Similarity=0.220 Sum_probs=64.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC----CC-Cccceee
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM----PP-SRKYFAF 137 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~-~~~~f~~ 137 (373)
.-+|+|+|||+|..|+.+.+ . ++ . +|+..|... .-...+.. .. .+-.++.
T Consensus 39 ~~~VLDlGcGtG~ls~~aa~--------~----Ga---------~--~V~avd~s~--~~~~a~~~~~~~~~~~~i~~i~ 93 (328)
T d1g6q1_ 39 DKIVLDVGCGTGILSMFAAK--------H----GA---------K--HVIGVDMSS--IIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHH--------T----CC---------S--EEEEEESST--HHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCEEEEeCCCCCHHHHHHHH--------h----CC---------C--EEEEEeCCH--HHHHHHHHHHHhCccccceEEE
Confidence 35899999999998876621 1 11 1 677777642 12222221 11 1223444
Q ss_pred ccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhh
Q 017363 138 GVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHEL 217 (373)
Q Consensus 138 gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 217 (373)
+ +..+--+|++++|+++|....+.+... .++..++.+|.+-|
T Consensus 94 ~---~~~~l~~~~~~~D~i~se~~~~~~~~e-----------------------------------~~~~~~~~a~~r~L 135 (328)
T d1g6q1_ 94 G---KLEDVHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYL 135 (328)
T ss_dssp S---CTTTSCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHE
T ss_pred e---ehhhccCcccceeEEEEEecceeeccc-----------------------------------hhHHHHHHHHHhcc
Confidence 4 334555789999999999888875532 25668899999999
Q ss_pred ccCCeEE
Q 017363 218 VPGGLIV 224 (373)
Q Consensus 218 ~pGG~lv 224 (373)
||||+++
T Consensus 136 kpgG~ii 142 (328)
T d1g6q1_ 136 VEGGLIF 142 (328)
T ss_dssp EEEEEEE
T ss_pred CCCeEEE
Confidence 9999985
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=98.09 E-value=2.8e-06 Score=75.07 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=74.3
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeeccCc
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFGVPG 141 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~gvpg 141 (373)
.|+|+|||+|.+++.+. +. .|+..++--|+..+-.....+.. .-.+-.|+.+...
T Consensus 32 lvLeIGcG~G~~~~~lA--------~~--------------~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~ 89 (204)
T d2fcaa1 32 IHIEVGTGKGQFISGMA--------KQ--------------NPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD 89 (204)
T ss_dssp EEEEECCTTSHHHHHHH--------HH--------------CTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG
T ss_pred eEEEEEecCcHHHHHHH--------Hh--------------CCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchh
Confidence 69999999999998872 21 24557888888765544443332 1223446666654
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
.+. ..+|++|+|.++..+...|..+.- . |.++. ...||+.-++-|||||
T Consensus 90 ~l~-~~~~~~~~d~v~i~fp~P~~k~~h--~---------k~Rl~-------------------~~~~l~~~~r~LkpgG 138 (204)
T d2fcaa1 90 TLT-DVFEPGEVKRVYLNFSDPWPKKRH--E---------KRRLT-------------------YSHFLKKYEEVMGKGG 138 (204)
T ss_dssp GHH-HHCCTTSCCEEEEESCCCCCSGGG--G---------GGSTT-------------------SHHHHHHHHHHHTTSC
T ss_pred hhh-cccCchhhhccccccccccchhhh--c---------chhhh-------------------HHHHHHHHHHhCCCCc
Confidence 443 568999999999999999965321 0 00110 1268888899999999
Q ss_pred eEEEEe
Q 017363 222 LIVFVL 227 (373)
Q Consensus 222 ~lvl~~ 227 (373)
.|++.+
T Consensus 139 ~l~i~T 144 (204)
T d2fcaa1 139 SIHFKT 144 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998864
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.05 E-value=2.9e-06 Score=78.07 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=38.6
Q ss_pred CCCCCCcceEEEcc-CcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEE
Q 017363 146 RLFPKSSLHFANSS-SSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIV 224 (373)
Q Consensus 146 rlfP~~Svd~~~Ss-~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv 224 (373)
.+.+.+++|++++. .++++|...-.. ..|...+|+.-++-|||||+|+
T Consensus 123 ~~~~~~~fd~v~~~~~~~~~~~~~~~~-------------------------------~~~~~~~l~~~~~~LkpgG~li 171 (292)
T d1xvaa_ 123 DVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNIASMVRPGGLLV 171 (292)
T ss_dssp HSCCTTCEEEEEECSSCGGGSCCTTSS-------------------------------SHHHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCCCceEEEEecCchhhcCCcccC-------------------------------hHHHHHHHHHHHHHcCcCcEEE
Confidence 34567889999875 578886532100 1367789999999999999999
Q ss_pred EEec
Q 017363 225 FVLF 228 (373)
Q Consensus 225 l~~~ 228 (373)
+.+.
T Consensus 172 ~~~~ 175 (292)
T d1xvaa_ 172 IDHR 175 (292)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 9875
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.97 E-value=1e-05 Score=75.49 Aligned_cols=99 Identities=17% Similarity=0.084 Sum_probs=64.5
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC----CCccceeecc
Q 017363 64 FKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP----PSRKYFAFGV 139 (373)
Q Consensus 64 ~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~----~~~~~f~~gv 139 (373)
-+|+|+|||+|..|+.+.+ . + +. +|+--|... .....-+... ..+-.++.+
T Consensus 35 ~~VLDiGcG~G~ls~~aa~--------~----G----------a~-~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~- 89 (316)
T d1oria_ 35 KVVLDVGSGTGILCMFAAK--------A----G----------AR-KVIGIECSS-ISDYAVKIVKANKLDHVVTIIKG- 89 (316)
T ss_dssp CEEEEETCTTSHHHHHHHH--------T----T----------CS-EEEEEECST-THHHHHHHHHHTTCTTTEEEEES-
T ss_pred CEEEEEecCCcHHHHHHHH--------h----C----------CC-EEEEEcCcH-HHhhhhhHHHHhCCccccceEec-
Confidence 5799999999988876621 1 1 11 677778643 2222212111 112224433
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
...+--+|.+++|+++|....|.+-.- .++..+|.+|.+-|+|
T Consensus 90 --~~~~~~~~~~~~D~ivs~~~~~~l~~e-----------------------------------~~~~~~l~~~~r~Lkp 132 (316)
T d1oria_ 90 --KVEEVELPVEKVDIIISEWMGYCLFYE-----------------------------------SMLNTVLHARDKWLAP 132 (316)
T ss_dssp --CTTTCCCSSSCEEEEEECCCBBTBTBT-----------------------------------CCHHHHHHHHHHHEEE
T ss_pred --cHHHcccccceeEEEeeeeeeeeeccH-----------------------------------HHHHHHHHHHHhcCCC
Confidence 445556788999999998887775421 2566899999999999
Q ss_pred CCeEE
Q 017363 220 GGLIV 224 (373)
Q Consensus 220 GG~lv 224 (373)
||+++
T Consensus 133 ~G~ii 137 (316)
T d1oria_ 133 DGLIF 137 (316)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99986
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.96 E-value=3.2e-06 Score=74.98 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=46.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcC---CCCccceeec
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTM---PPSRKYFAFG 138 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l---~~~~~~f~~g 138 (373)
..-+|+|+|||+|..|..+...+ .. .-.|+-.|.-..-....-+.+ ...+..+..+
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~--------~~-------------~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~ 133 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVV--------GE-------------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------CT-------------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred ccceEEEecCccchhHHHHHHHh--------CC-------------CCcEEEeecchhhHHHhhhhHhhhcccccccccC
Confidence 45799999999999999773322 11 114555554322111111111 1123334443
Q ss_pred cCcccccCCCCCCcceEEEccCccccc
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSLNWL 165 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~alHWL 165 (373)
. -.+-+++.+++|.+++..+++++
T Consensus 134 d---~~~~~~~~~~fD~I~~~~~~~~~ 157 (213)
T d1dl5a1 134 D---GYYGVPEFSPYDVIFVTVGVDEV 157 (213)
T ss_dssp C---GGGCCGGGCCEEEEEECSBBSCC
T ss_pred c---hHHccccccchhhhhhhccHHHh
Confidence 3 34555667889999999999873
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.96 E-value=1.5e-05 Score=68.98 Aligned_cols=102 Identities=9% Similarity=0.037 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhh-----cCCCCcccee
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQ-----TMPPSRKYFA 136 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~-----~l~~~~~~f~ 136 (373)
+.-+|+|+|||+|..|+.+. +. .+ +|+..|+-..-....=+ .+...+-.+.
T Consensus 52 ~~~~VLDiGcG~G~~~~~la--------~~--------------~~--~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~ 107 (194)
T d1dusa_ 52 KDDDILDLGCGYGVIGIALA--------DE--------------VK--STTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG--------GG--------------SS--EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCeEEEEeecCChhHHHHH--------hh--------------cc--ccceeeeccccchhHHHHHHHhCCccceEEEE
Confidence 45789999999998887662 11 11 45555654322111111 1111111222
Q ss_pred eccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 137 FGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 137 ~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
. +.+++ -++++++|+++|+..+|+... .+..||+.-.+-
T Consensus 108 ~---~d~~~-~~~~~~fD~Ii~~~p~~~~~~-------------------------------------~~~~~l~~~~~~ 146 (194)
T d1dusa_ 108 H---SDLYE-NVKDRKYNKIITNPPIRAGKE-------------------------------------VLHRIIEEGKEL 146 (194)
T ss_dssp E---CSTTT-TCTTSCEEEEEECCCSTTCHH-------------------------------------HHHHHHHHHHHH
T ss_pred E---cchhh-hhccCCceEEEEcccEEecch-------------------------------------hhhhHHHHHHHh
Confidence 2 23344 467899999999988876321 123577777788
Q ss_pred hccCCeEEEEec
Q 017363 217 LVPGGLIVFVLF 228 (373)
Q Consensus 217 L~pGG~lvl~~~ 228 (373)
|+|||+|++...
T Consensus 147 LkpgG~l~i~~~ 158 (194)
T d1dusa_ 147 LKDNGEIWVVIQ 158 (194)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCcCcEEEEEEe
Confidence 999999988653
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.90 E-value=1.3e-05 Score=71.89 Aligned_cols=109 Identities=11% Similarity=0.035 Sum_probs=66.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-Cccceeecc
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGV 139 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gv 139 (373)
....+|+|+|||+|..+..+.+ + . |.-.|+--|+..---..+-..... .+..++.+.
T Consensus 73 kpG~~VLDlGcGsG~~~~~la~-~-------~--------------~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d 130 (230)
T d1g8sa_ 73 KRDSKILYLGASAGTTPSHVAD-I-------A--------------DKGIVYAIEYAPRIMRELLDACAERENIIPILGD 130 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHH-H-------T--------------TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC
T ss_pred CCCCEEEEeCEEcCHHHHHHHH-h-------C--------------CCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEe
Confidence 3468999999999988887733 2 1 112677777753222222111111 223344444
Q ss_pred CcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhcc
Q 017363 140 PGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVP 219 (373)
Q Consensus 140 pgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 219 (373)
..... ..++.+.++.+++..+||..+ ...+++.-..-|||
T Consensus 131 ~~~~~--~~~~~~~~v~~i~~~~~~~~~--------------------------------------~~~~l~~~~r~LKp 170 (230)
T d1g8sa_ 131 ANKPQ--EYANIVEKVDVIYEDVAQPNQ--------------------------------------AEILIKNAKWFLKK 170 (230)
T ss_dssp TTCGG--GGTTTCCCEEEEEECCCSTTH--------------------------------------HHHHHHHHHHHEEE
T ss_pred eccCc--ccccccceeEEeeccccchHH--------------------------------------HHHHHHHHHHhccc
Confidence 43332 234566777777777777442 33577777889999
Q ss_pred CCeEEEEeccCC
Q 017363 220 GGLIVFVLFSLP 231 (373)
Q Consensus 220 GG~lvl~~~g~~ 231 (373)
||++++....+.
T Consensus 171 gG~~~i~~k~~~ 182 (230)
T d1g8sa_ 171 GGYGMIAIKARS 182 (230)
T ss_dssp EEEEEEEEEGGG
T ss_pred CceEEEEeeccc
Confidence 999999886654
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.89 E-value=1.4e-05 Score=72.81 Aligned_cols=18 Identities=28% Similarity=0.287 Sum_probs=15.4
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
.-+|+|+|||+|..++.+
T Consensus 121 g~~VLDiGcGsG~l~i~a 138 (254)
T d2nxca1 121 GDKVLDLGTGSGVLAIAA 138 (254)
T ss_dssp TCEEEEETCTTSHHHHHH
T ss_pred cCEEEEcccchhHHHHHH
Confidence 369999999999988765
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.83 E-value=2e-05 Score=71.61 Aligned_cols=22 Identities=9% Similarity=0.225 Sum_probs=18.5
Q ss_pred ceEEeeecCCCCcccHHHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQNI 84 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~i 84 (373)
-.+|+|+|||+|..|+.+...+
T Consensus 86 G~rVLEiG~GsG~lt~~la~~v 107 (250)
T d1yb2a1 86 GMDILEVGVGSGNMSSYILYAL 107 (250)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH
T ss_pred cCEEEEeeeeCcHHHHHHHHHh
Confidence 4799999999999999885443
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.82 E-value=2.1e-05 Score=69.27 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=71.8
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC---CCccceeeccCc
Q 017363 65 KLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP---PSRKYFAFGVPG 141 (373)
Q Consensus 65 ~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~---~~~~~f~~gvpg 141 (373)
.|+|+|||+|.+++.+.. . .|+..++-.|+..+-.....+... -.+-.|..+...
T Consensus 34 lvLdIGcG~G~~~~~lA~--------~--------------~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~ 91 (204)
T d1yzha1 34 IHVEVGSGKGAFVSGMAK--------Q--------------NPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS 91 (204)
T ss_dssp EEEEESCTTSHHHHHHHH--------H--------------CTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS
T ss_pred eEEEEeccCCHHHHHHHH--------H--------------CCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH
Confidence 689999999999988722 1 244567777776544444333221 122345555554
Q ss_pred ccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCC
Q 017363 142 SFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGG 221 (373)
Q Consensus 142 SFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 221 (373)
-+. +.+|+.|+|.++.++.-.|-.+.-.. .++. -..||+.-++-|||||
T Consensus 92 ~l~-~~~~~~~~~~i~i~fPdPw~K~~h~k-----------rRl~-------------------~~~~l~~~~~~LkpgG 140 (204)
T d1yzha1 92 DLT-DYFEDGEIDRLYLNFSDPWPKKRHEK-----------RRLT-------------------YKTFLDTFKRILPENG 140 (204)
T ss_dssp CGG-GTSCTTCCSEEEEESCCCCCSGGGGG-----------GSTT-------------------SHHHHHHHHHHSCTTC
T ss_pred HHh-hhccCCceehhcccccccccchhhhh-----------hhhh-------------------HHHHHHHHHHhCCCCc
Confidence 444 57899999999999999995532100 0110 1268999999999999
Q ss_pred eEEEEe
Q 017363 222 LIVFVL 227 (373)
Q Consensus 222 ~lvl~~ 227 (373)
.|.+.+
T Consensus 141 ~l~i~T 146 (204)
T d1yzha1 141 EIHFKT 146 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998754
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=5.2e-05 Score=70.17 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=75.2
Q ss_pred hhHHhhHHHHHHHHHH-HHHHHHHHHhhhccccCCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcC
Q 017363 23 SYAKNSSFQRMIIDAA-KEMISESIFDKLDLKSLGFDDTCGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQ 101 (373)
Q Consensus 23 sY~~nS~~Q~~~~~~~-~~~l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~ 101 (373)
+|+.-...+...-... .....+||.+.... .+.-+|+|+|||+|..|+.+.+ . +
T Consensus 3 ~y~~~~~h~~ml~D~~r~~~y~~ai~~~~~~--------~~~~~VLDiGcG~G~lsl~aa~--------~----G----- 57 (311)
T d2fyta1 3 SYGHYGIHEEMLKDKIRTESYRDFIYQNPHI--------FKDKVVLDVGCGTGILSMFAAK--------A----G----- 57 (311)
T ss_dssp GGGSHHHHHHHHTCHHHHHHHHHHHHHCGGG--------TTTCEEEEETCTTSHHHHHHHH--------T----T-----
T ss_pred CcccchHHHHHhCCHHHHHHHHHHHHhcccc--------CCcCEEEEECCCCCHHHHHHHH--------c----C-----
Confidence 5655544333322221 34455666553221 2345899999999998876621 1 1
Q ss_pred CCCCCceeEEEecCCCCCchhhHhhcC----CCCc-cceeeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCC
Q 017363 102 NSSSALEFQVFFNDHYGNDFNTLFQTM----PPSR-KYFAFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSR 176 (373)
Q Consensus 102 ~~~~~~~~~v~~nDLp~NDFn~lf~~l----~~~~-~~f~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~ 176 (373)
+. +|+..|...+ ....+.. .... -.++.+ ...+--+|+.++|+++|....|.+-.-
T Consensus 58 -----a~-~V~aid~s~~--~~~a~~~~~~~~~~~~i~~~~~---~~~~l~~~~~~~D~Ivse~~~~~~~~e-------- 118 (311)
T d2fyta1 58 -----AK-KVLGVDQSEI--LYQAMDIIRLNKLEDTITLIKG---KIEEVHLPVEKVDVIISEWMGYFLLFE-------- 118 (311)
T ss_dssp -----CS-EEEEEESSTH--HHHHHHHHHHTTCTTTEEEEES---CTTTSCCSCSCEEEEEECCCBTTBTTT--------
T ss_pred -----CC-EEEEEeCHHH--HHHHHHHHHHhCCCccceEEEe---eHHHhcCccccceEEEEeeeeeecccc--------
Confidence 11 6777786532 1111111 1111 223333 333444688999999998777654321
Q ss_pred CCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 177 SPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 177 ~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
..+..++.+|.+-|+|||+++.
T Consensus 119 ---------------------------~~~~~~~~a~~~~Lkp~G~iip 140 (311)
T d2fyta1 119 ---------------------------SMLDSVLYAKNKYLAKGGSVYP 140 (311)
T ss_dssp ---------------------------CHHHHHHHHHHHHEEEEEEEES
T ss_pred ---------------------------cccHHHHHHHHhcCCCCcEEec
Confidence 1345788899999999999973
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.68 E-value=5.1e-05 Score=65.04 Aligned_cols=20 Identities=25% Similarity=0.316 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
+.-+|+|+|||+|..|+.+.
T Consensus 33 ~g~~VLDiGcGsG~~s~~lA 52 (186)
T d1l3ia_ 33 KNDVAVDVGCGTGGVTLELA 52 (186)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEEECCeEccccccc
Confidence 45689999999999998774
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=0.00017 Score=67.59 Aligned_cols=22 Identities=27% Similarity=0.373 Sum_probs=17.7
Q ss_pred cHHHHHHHHHhhhccCCeEEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
|+...|+...+.|||||++|+.
T Consensus 244 ~~~~~l~e~~r~LKpGg~iv~~ 265 (328)
T d1nw3a_ 244 EVDHQLKERFANMKEGGRIVSS 265 (328)
T ss_dssp HHHHHHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHHHHHhCCCCcEEEEe
Confidence 4446778888999999999864
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.60 E-value=0.00011 Score=67.02 Aligned_cols=99 Identities=17% Similarity=0.241 Sum_probs=59.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc-C------CCCccce
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT-M------PPSRKYF 135 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~-l------~~~~~~f 135 (373)
-.+|+|.|||+|..|+.+...+ . |.-+|+--|.-. ++-...+. + ...+-.|
T Consensus 97 G~~VLE~G~GsG~lt~~La~~v--------g-------------p~G~V~~~d~~~-~~~~~Ar~n~~~~~~~~~~nv~~ 154 (264)
T d1i9ga_ 97 GARVLEAGAGSGALTLSLLRAV--------G-------------PAGQVISYEQRA-DHAEHARRNVSGCYGQPPDNWRL 154 (264)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------C-------------TTSEEEEECSCH-HHHHHHHHHHHHHHTSCCTTEEE
T ss_pred CCEEEecCcCCcHHHHHHHHhh--------C-------------CCcEEEEecCCH-HHHHHHHHhhhhhccCCCceEEE
Confidence 5799999999999999886544 1 112455555432 22222211 1 0112223
Q ss_pred eeccCcccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHh
Q 017363 136 AFGVPGSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAH 215 (373)
Q Consensus 136 ~~gvpgSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 215 (373)
..+ .+.+.-+|++++|.+|.- +|.+- .+|..-++
T Consensus 155 ~~~---d~~~~~~~~~~fDaV~ld--------lp~P~-----------------------------------~~l~~~~~ 188 (264)
T d1i9ga_ 155 VVS---DLADSELPDGSVDRAVLD--------MLAPW-----------------------------------EVLDAVSR 188 (264)
T ss_dssp ECS---CGGGCCCCTTCEEEEEEE--------SSCGG-----------------------------------GGHHHHHH
T ss_pred Eec---ccccccccCCCcceEEEe--------cCCHH-----------------------------------HHHHHHHh
Confidence 333 335556889999999852 44221 34566678
Q ss_pred hhccCCeEEEEecc
Q 017363 216 ELVPGGLIVFVLFS 229 (373)
Q Consensus 216 EL~pGG~lvl~~~g 229 (373)
-|||||++++..+.
T Consensus 189 ~LkpGG~lv~~~P~ 202 (264)
T d1i9ga_ 189 LLVAGGVLMVYVAT 202 (264)
T ss_dssp HEEEEEEEEEEESS
T ss_pred ccCCCCEEEEEeCc
Confidence 99999999887654
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=4.4e-05 Score=67.99 Aligned_cols=20 Identities=25% Similarity=0.092 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
..-+|+|+|||+|..|..+.
T Consensus 76 ~g~~VLdiG~GsGy~ta~la 95 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFA 95 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHH
Confidence 35799999999999998774
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.55 E-value=0.00017 Score=64.33 Aligned_cols=109 Identities=9% Similarity=-0.015 Sum_probs=64.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCCC-CccceeeccC
Q 017363 62 GTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMPP-SRKYFAFGVP 140 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~~-~~~~f~~gvp 140 (373)
.-.+|+|+|||+|..|..+.+.+ .. .=.|+--|.-..--..+-+.... .....+.+..
T Consensus 73 pG~~VLDlGaGsG~~t~~la~~V--------G~-------------~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~ 131 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSDIV--------GW-------------EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA 131 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH--------CT-------------TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT
T ss_pred CCCEEEEeccCCCHHHHHHHHHh--------CC-------------CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC
Confidence 35899999999999999884433 11 11577777654322222222221 1223344444
Q ss_pred cccccCCCCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccC
Q 017363 141 GSFHGRLFPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPG 220 (373)
Q Consensus 141 gSFy~rlfP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 220 (373)
+.-..-.++..++|++++..+.++ +-..+++.-.+-|+||
T Consensus 132 ~~~~~~~~~~~~vD~i~~d~~~~~----------------------------------------~~~~~l~~~~~~Lkpg 171 (227)
T d1g8aa_ 132 TKPEEYRALVPKVDVIFEDVAQPT----------------------------------------QAKILIDNAEVYLKRG 171 (227)
T ss_dssp TCGGGGTTTCCCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEEEE
T ss_pred CCcccccccccceEEEEEEccccc----------------------------------------hHHHHHHHHHHhcccC
Confidence 433333344568999886533221 2235777888899999
Q ss_pred CeEEEEeccCC
Q 017363 221 GLIVFVLFSLP 231 (373)
Q Consensus 221 G~lvl~~~g~~ 231 (373)
|+++++..++.
T Consensus 172 G~lvi~~ka~~ 182 (227)
T d1g8aa_ 172 GYGMIAVKSRS 182 (227)
T ss_dssp EEEEEEEEGGG
T ss_pred CeEEEEEECCc
Confidence 99999876643
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=8.3e-05 Score=65.79 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=17.9
Q ss_pred cHHHHHHHHHhhhccCCeEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl 225 (373)
|...||+.-.+-|||||+|++
T Consensus 141 ~~~~~~~~~~r~LkpGG~~~~ 161 (229)
T d1zx0a1 141 QFNFIKNHAFRLLKPGGVLTY 161 (229)
T ss_dssp HHHHHHHTHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEE
Confidence 556788888899999999976
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.40 E-value=9.3e-05 Score=65.09 Aligned_cols=25 Identities=16% Similarity=0.107 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhhccCCeEEEEeccC
Q 017363 206 TEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 206 ~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
...||+.-.+-|||||++++..-.+
T Consensus 139 ~~~~l~~~~~~LkpgG~l~i~~~~~ 163 (209)
T d1nt2a_ 139 IEILKANAEFFLKEKGEVVIMVKAR 163 (209)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred HHHHHHHHHHHhccCCeEEEEEEcc
Confidence 3467888889999999999987654
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.40 E-value=0.00018 Score=64.04 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=16.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
..-+|+|+|||+|..|..+.
T Consensus 70 ~g~~VLdIG~GsGy~ta~La 89 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTALIA 89 (224)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCCHHHHHHH
Confidence 34699999999999997653
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.01 E-value=0.00081 Score=64.81 Aligned_cols=22 Identities=14% Similarity=0.068 Sum_probs=18.3
Q ss_pred cHHHHHHHHHhhhccCCeEEEE
Q 017363 205 DTEAFLNARAHELVPGGLIVFV 226 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~ 226 (373)
|+...|+...+.|||||++|..
T Consensus 311 ~l~~~L~ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 311 DLNKKVEKILQTAKVGCKIISL 332 (406)
T ss_dssp HHHHHHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHHHHHhcCCCcEEEEe
Confidence 5557888889999999999864
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.0013 Score=60.08 Aligned_cols=126 Identities=9% Similarity=0.099 Sum_probs=64.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--CCccceeec
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--PSRKYFAFG 138 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~~~~~f~~g 138 (373)
.+..+|+|+|||+|.-++.+... .|..+|+..|....=.+..=++.. .-.++ .-
T Consensus 107 ~~~~~vlDlGtGSG~I~i~la~~----------------------~p~~~v~avDis~~Al~~A~~Na~~~~~~~v--~~ 162 (274)
T d2b3ta1 107 EQPCRILDLGTGTGAIALALASE----------------------RPDCEIIAVDRMPDAVSLAQRNAQHLAIKNI--HI 162 (274)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHH----------------------CTTSEEEEECSSHHHHHHHHHHHHHHTCCSE--EE
T ss_pred ccccceeeeehhhhHHHHHHHhh----------------------CCcceeeeccchhHHHhHHHHHHHHhCcccc--ee
Confidence 35688999999999998877321 123467777765322111111110 00111 22
Q ss_pred cCcccccCCCCCCcceEEEccCcc---c-ccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHH
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSL---N-WLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARA 214 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~al---H-WLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 214 (373)
+-++++.. +|.+++|+++|+=-. + | ...|..+.-+...+...| . -.-..+..+++.=.
T Consensus 163 ~~~d~~~~-~~~~~fDlIvsNPPYi~~~~~-~~~~~v~~~eP~~AL~~g--------~--------dGl~~~~~i~~~a~ 224 (274)
T d2b3ta1 163 LQSDWFSA-LAGQQFAMIVSNPPYIDEQDP-HLQQGDVRFEPLTALVAA--------D--------SGMADIVHIIEQSR 224 (274)
T ss_dssp ECCSTTGG-GTTCCEEEEEECCCCBCTTCH-HHHSSGGGSSCSTTTBCH--------H--------HHTHHHHHHHHHHG
T ss_pred eecccccc-cCCCceeEEEecchhhhhhhh-cccccccccchhhhcccc--------c--------ccchHHHHHHHHHH
Confidence 23344443 356789999998211 0 0 001111111111111111 1 11234456888888
Q ss_pred hhhccCCeEEEEec
Q 017363 215 HELVPGGLIVFVLF 228 (373)
Q Consensus 215 ~EL~pGG~lvl~~~ 228 (373)
+-|+|||.+++...
T Consensus 225 ~~L~~~G~l~lEig 238 (274)
T d2b3ta1 225 NALVSGGFLLLEHG 238 (274)
T ss_dssp GGEEEEEEEEEECC
T ss_pred HhcCCCCEEEEEEC
Confidence 88999999999753
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.93 E-value=0.00035 Score=63.66 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
.-.+|+|+|||+|..|+.+.
T Consensus 103 pG~~VLDiG~GsG~lt~~lA 122 (266)
T d1o54a_ 103 EGDRIIDTGVGSGAMCAVLA 122 (266)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHH
Confidence 35899999999999999874
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.88 E-value=0.0018 Score=57.00 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=16.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
+.-+|+|+|||+|..|..+.
T Consensus 78 ~g~~VLeIGsGsGY~taila 97 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALIS 97 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCChhHHHHH
Confidence 34699999999999998663
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=96.86 E-value=0.0011 Score=57.02 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=32.7
Q ss_pred CCCCcceEEEccCcccccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhhhccCCeEEE
Q 017363 148 FPKSSLHFANSSSSLNWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHELVPGGLIVF 225 (373)
Q Consensus 148 fP~~Svd~~~Ss~alHWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 225 (373)
.|.+.+|+|+|-+.|+.++.. ...+.|+.=++-|+|||.|++
T Consensus 128 ~~~~~fDvI~CRNVLiYf~~~------------------------------------~~~~vl~~l~~~L~pGG~L~l 169 (193)
T d1af7a2 128 NVPGPFDAIFCRNVMIYFDKT------------------------------------TQEDILRRFVPLLKPDGLLFA 169 (193)
T ss_dssp CCCCCEEEEEECSSGGGSCHH------------------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCCccEEEeehhHHhcCHH------------------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 356789999999999997731 223577888899999998764
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.33 E-value=0.0032 Score=55.54 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHH
Q 017363 62 GTFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~ 80 (373)
+.-+|+|+|||+|..|..+
T Consensus 80 ~g~~VLeIGtGsGY~ta~l 98 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACF 98 (223)
T ss_dssp TTCEEEEESCTTSHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHH
Confidence 4579999999999999887
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0027 Score=59.21 Aligned_cols=22 Identities=9% Similarity=0.169 Sum_probs=18.7
Q ss_pred ceEEeeecCCCCcccHHHHHHH
Q 017363 63 TFKLADFGCSVGPNTFIAVQNI 84 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~i 84 (373)
--+|+|+|||+|..|+.+...+
T Consensus 99 G~rVLE~GtGsG~lt~~LAr~v 120 (324)
T d2b25a1 99 GDTVLEAGSGSGGMSLFLSKAV 120 (324)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEecccccHHHHHHHHHh
Confidence 4799999999999999886443
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=96.12 E-value=0.0011 Score=57.35 Aligned_cols=25 Identities=36% Similarity=0.616 Sum_probs=20.9
Q ss_pred cHHHHHHHHHhhhccCCeEEEEecc
Q 017363 205 DTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 205 D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
....+|..+..-|+|||+|++..+-
T Consensus 119 ~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 119 NLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred hHHHHHHHHHHhcCCCCeeeeeccc
Confidence 3457899999999999999987754
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.94 E-value=0.031 Score=51.32 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=23.0
Q ss_pred HHhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 201 QFKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 201 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.+.+++..++..-.+-|+|||.|+++...
T Consensus 235 ~~~~~~~~l~~~a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 235 RAYRAYKEVNLRAIKLLKEGGILATASCS 263 (318)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 34456677899999999999999887654
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.29 E-value=0.041 Score=50.59 Aligned_cols=29 Identities=17% Similarity=-0.040 Sum_probs=23.2
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEeccC
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFSL 230 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g~ 230 (373)
+.++...++..-.+-|+|||+|+++....
T Consensus 238 ~~~~y~~l~~~a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 238 GLRAYFNVNFAGLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 44567778888889999999999987543
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=94.10 E-value=0.091 Score=47.69 Aligned_cols=126 Identities=9% Similarity=0.014 Sum_probs=66.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhc--CCCCccceeec
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQT--MPPSRKYFAFG 138 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~--l~~~~~~f~~g 138 (373)
....+|+|.|||+|...+.++..+ .++ ..+..+++-.|.-..-....-.. +......+..+
T Consensus 116 ~~~~~vlDp~~GsG~~l~~~~~~l----~~~-------------~~~~~~~~g~di~~~~~~~a~~~~~~~~~~~~~~~~ 178 (328)
T d2f8la1 116 KKNVSILDPACGTANLLTTVINQL----ELK-------------GDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQ 178 (328)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHH----HTT-------------SSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES
T ss_pred CCCCEEEeCCCCcchhHHHHHHHH----Hhc-------------cCccceEEEecccHHHHHHHHHHHHHhhhhhhhhcc
Confidence 457899999999998766664443 211 13456788888643221110000 01111122222
Q ss_pred cCcccccCCCCCCcceEEEccCcc--cccccchhhhhcCCCCCCCCCceeecCCCHHHHHHHHHHHhhcHHHHHHHHHhh
Q 017363 139 VPGSFHGRLFPKSSLHFANSSSSL--NWLSKISKEILDSRSPAWNKGSIICSGLVKGVSEAYSAQFKNDTEAFLNARAHE 216 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~Ss~al--HWLS~~P~~~~~~~~~~~nkg~I~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 216 (373)
. + -...|...+|+++++=-. +|.... ..........|+. .-...|+..-..-
T Consensus 179 d---~-~~~~~~~~fD~vi~NPPy~~~~~~~~----~~~~~~~~~~~~~------------------~~~~~Fi~~~~~~ 232 (328)
T d2f8la1 179 D---G-LANLLVDPVDVVISDLPVGYYPDDEN----AKTFELCREEGHS------------------FAHFLFIEQGMRY 232 (328)
T ss_dssp C---T-TSCCCCCCEEEEEEECCCSEESCHHH----HTTSTTCCSSSCE------------------EHHHHHHHHHHHT
T ss_pred c---c-ccccccccccccccCCCCCCCccchh----hhhcchhcccCcc------------------hHHHHHHHHHHHh
Confidence 1 1 134567889999998443 332111 1110001111110 0123588888899
Q ss_pred hccCCeEEEEecc
Q 017363 217 LVPGGLIVFVLFS 229 (373)
Q Consensus 217 L~pGG~lvl~~~g 229 (373)
|+|||++++.++.
T Consensus 233 Lk~~G~~~~I~p~ 245 (328)
T d2f8la1 233 TKPGGYLFFLVPD 245 (328)
T ss_dssp EEEEEEEEEEEEG
T ss_pred cCCCCceEEEecC
Confidence 9999999999885
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.71 E-value=0.13 Score=45.37 Aligned_cols=22 Identities=9% Similarity=-0.130 Sum_probs=18.9
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017363 61 CGTFKLADFGCSVGPNTFIAVQ 82 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~~ 82 (373)
.+..+|+|+|||+|.-++.+..
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~ 81 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGA 81 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHH
T ss_pred cccceEEEeCCCchHHHHHHHH
Confidence 4578999999999999998853
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.74 E-value=0.069 Score=45.79 Aligned_cols=18 Identities=17% Similarity=0.019 Sum_probs=14.9
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
--+|+|+|||+|..++.+
T Consensus 49 Gk~VLDlGcGtG~l~i~a 66 (197)
T d1ne2a_ 49 GRSVIDAGTGNGILACGS 66 (197)
T ss_dssp TSEEEEETCTTCHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHH
Confidence 369999999999877654
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.68 E-value=0.084 Score=45.02 Aligned_cols=18 Identities=28% Similarity=0.346 Sum_probs=15.2
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
.-+|+|+|||+|..++.+
T Consensus 47 g~~vLDlg~GtG~l~i~a 64 (201)
T d1wy7a1 47 GKVVADLGAGTGVLSYGA 64 (201)
T ss_dssp TCEEEEETCTTCHHHHHH
T ss_pred CCEEEECcCcchHHHHHH
Confidence 468999999999887765
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.52 E-value=0.25 Score=43.71 Aligned_cols=69 Identities=9% Similarity=-0.086 Sum_probs=42.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCchhhHhhcCC--C--Cccceeec
Q 017363 63 TFKLADFGCSVGPNTFIAVQNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGNDFNTLFQTMP--P--SRKYFAFG 138 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~NDFn~lf~~l~--~--~~~~f~~g 138 (373)
.-+|+|+|||+|+.|+.+.. . . . -+|+..|+-.+-+..+=+++. . .+-.+..|
T Consensus 108 g~~VlD~~aG~G~~~l~~a~--------~-~------------~--~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~ 164 (260)
T d2frna1 108 DELVVDMFAGIGHLSLPIAV--------Y-G------------K--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 164 (260)
T ss_dssp TCEEEETTCTTTTTHHHHHH--------H-T------------C--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred ccEEEECcceEcHHHHHHHH--------h-C------------C--cEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc
Confidence 47899999999999987721 1 0 0 168888886655544444332 1 12234556
Q ss_pred cCcccccCCCCCCcceEEEc
Q 017363 139 VPGSFHGRLFPKSSLHFANS 158 (373)
Q Consensus 139 vpgSFy~rlfP~~Svd~~~S 158 (373)
+... +.+.+.+|.+++
T Consensus 165 D~~~----~~~~~~~D~Ii~ 180 (260)
T d2frna1 165 DNRD----FPGENIADRILM 180 (260)
T ss_dssp CTTT----CCCCSCEEEEEE
T ss_pred chHH----hccCCCCCEEEE
Confidence 6533 356677887774
|
| >d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: DNA methylase TaqI, N-terminal domain domain: DNA methylase TaqI, N-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=91.52 E-value=1.3 Score=36.49 Aligned_cols=23 Identities=43% Similarity=0.739 Sum_probs=19.3
Q ss_pred HHHHHHHHhhhccCCeEEEEecc
Q 017363 207 EAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 207 ~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
..|+..-.+-|+|||++++.++.
T Consensus 124 ~~Fi~~al~~lk~~G~~~~I~p~ 146 (223)
T d2ih2a1 124 GAFLEKAVRLLKPGGVLVFVVPA 146 (223)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhcccCCceEEEEee
Confidence 46788888889999999999874
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.87 E-value=2 Score=38.80 Aligned_cols=20 Identities=15% Similarity=0.228 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017363 62 GTFKLADFGCSVGPNTFIAV 81 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~~ 81 (373)
+..+|+|++|++|..|+.+.
T Consensus 132 ~~~rVLdlf~~tG~~sl~aa 151 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLVAA 151 (309)
T ss_dssp SCCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEecCCCcHHHHHHH
Confidence 45799999999999998774
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=86.20 E-value=2.7 Score=37.08 Aligned_cols=19 Identities=26% Similarity=0.345 Sum_probs=15.4
Q ss_pred CceEEeeecCCCCcccHHH
Q 017363 62 GTFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 62 ~~~~IaD~GCs~G~NS~~~ 80 (373)
+..+|+|+|||+|.-++.+
T Consensus 110 ~~~~vld~g~GsG~i~~~l 128 (271)
T d1nv8a_ 110 GIKTVADIGTGSGAIGVSV 128 (271)
T ss_dssp TCCEEEEESCTTSHHHHHH
T ss_pred cccEEEEeeeeeehhhhhh
Confidence 3568999999999876665
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=85.97 E-value=0.91 Score=41.10 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=22.1
Q ss_pred HhhcHHHHHHHHHhhhccCCeEEEEecc
Q 017363 202 FKNDTEAFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 202 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
+.+|+...++.-.+-|+|||.|++++..
T Consensus 238 ~~~~~~~L~~~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 238 VSKDYHKLIRQGLEILSENGLIIASTNA 265 (317)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3456667888888899999999987754
|
| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=83.94 E-value=0.9 Score=39.34 Aligned_cols=49 Identities=18% Similarity=0.178 Sum_probs=34.6
Q ss_pred CCceEEeeecCCCCcccHHHH------------HHHHHHHHHHHHhccCCCcCCCCCCceeEEEecCCCCCc
Q 017363 61 CGTFKLADFGCSVGPNTFIAV------------QNIIEAVQTKYRADHQDNHQNSSSALEFQVFFNDHYGND 120 (373)
Q Consensus 61 ~~~~~IaD~GCs~G~NS~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~~~~~~v~~nDLp~ND 120 (373)
.+.-+|+|+|||+|..|..++ ...++.+++++.. .+.++++..|.-.-|
T Consensus 20 ~~~d~VlEIGpG~G~LT~~Ll~~~~~v~avE~D~~l~~~l~~~~~~-----------~~n~~i~~~D~l~~~ 80 (235)
T d1qama_ 20 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-----------HDNFQVLNKDILQFK 80 (235)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-----------CCSEEEECCCGGGCC
T ss_pred CCCCeEEEECCCchHHHHHHHhCcCceEEEeeccchHHHHHHHhhc-----------ccchhhhhhhhhhcc
Confidence 346789999999999999987 4455666665432 345778887765444
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.51 E-value=0.63 Score=37.20 Aligned_cols=18 Identities=17% Similarity=0.034 Sum_probs=15.5
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
--+|+|+|||+|..++..
T Consensus 15 g~~vlDl~~GtG~~~iea 32 (152)
T d2esra1 15 GGRVLDLFAGSGGLAIEA 32 (152)
T ss_dssp SCEEEEETCTTCHHHHHH
T ss_pred CCeEEEcCCccCHHHHHH
Confidence 468999999999888755
|
| >d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Type I restriction enzyme StySJI M protein species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=81.01 E-value=5.9 Score=36.51 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=19.9
Q ss_pred HHHHHHHhhhccCCeEEEEecc
Q 017363 208 AFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.|+..-.+-|++||++++.++.
T Consensus 279 ~Fi~~~~~~Lk~~G~~~iI~p~ 300 (425)
T d2okca1 279 NFLQHMMLMLKTGGRAAVVLPD 300 (425)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHhcCCCCeEEEEech
Confidence 5999999999999999999984
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=80.92 E-value=0.46 Score=38.98 Aligned_cols=18 Identities=17% Similarity=-0.016 Sum_probs=15.0
Q ss_pred ceEEeeecCCCCcccHHH
Q 017363 63 TFKLADFGCSVGPNTFIA 80 (373)
Q Consensus 63 ~~~IaD~GCs~G~NS~~~ 80 (373)
.-+|+|+|||+|..++..
T Consensus 42 g~~vLDl~~G~G~~~i~a 59 (171)
T d1ws6a1 42 RGRFLDPFAGSGAVGLEA 59 (171)
T ss_dssp CCEEEEETCSSCHHHHHH
T ss_pred CCeEEEeccccchhhhhh
Confidence 358999999999887655
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=80.92 E-value=2.1 Score=38.53 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=18.8
Q ss_pred HHHHHHHhhhccCCeEEEEecc
Q 017363 208 AFLNARAHELVPGGLIVFVLFS 229 (373)
Q Consensus 208 ~FL~~Ra~EL~pGG~lvl~~~g 229 (373)
.|++.-++-|+|||.|++...+
T Consensus 176 eF~~~~~~~L~p~Gvlv~~~~s 197 (312)
T d1uira_ 176 EFYRLVKAHLNPGGVMGMQTGM 197 (312)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCceEEEecCC
Confidence 5888888999999999987754
|