Citrus Sinensis ID: 017367
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 373 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SFU3 | 532 | Purple acid phosphatase 1 | yes | no | 0.959 | 0.672 | 0.786 | 1e-177 | |
| O48840 | 545 | Purple acid phosphatase 1 | no | no | 0.949 | 0.649 | 0.577 | 1e-118 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.734 | 0.598 | 0.669 | 1e-110 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.745 | 0.640 | 0.415 | 5e-71 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.745 | 0.636 | 0.420 | 3e-67 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.761 | 0.665 | 0.396 | 6e-65 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.761 | 0.649 | 0.386 | 2e-64 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.780 | 0.625 | 0.369 | 6e-57 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.780 | 0.621 | 0.369 | 1e-56 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.796 | 0.633 | 0.371 | 2e-56 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 620 bits (1600), Expect = e-177, Method: Compositional matrix adjust.
Identities = 284/361 (78%), Positives = 320/361 (88%), Gaps = 3/361 (0%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS +++FRT+P S P SYP RIA+VGDLGLTYNTT TI+H+ N PDL+LL+GDV+YANL
Sbjct: 168 MSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYNTTDTISHLIHNSPDLILLIGDVSYANL 227
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGT SDCYSCSF +TPIHETYQPRWDYWGRFM+NL SKVP+MV+EGNHEIE QA N+
Sbjct: 228 YLTNGTSSDCYSCSFPETPIHETYQPRWDYWGRFMENLTSKVPLMVIEGNHEIELQAENK 287
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TF AYSSRFAFP ESGS S+ YYSFNAGGIHF+MLGAYI+YDKS QY+WL+KDLA VD
Sbjct: 288 TFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVD 347
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RSVTPWLVA+WHPPWYSSY++HYREAECM+ ME LLYSYG DIVFNGHVHAYERSNRV+
Sbjct: 348 RSVTPWLVASWHPPWYSSYTAHYREAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVY 407
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+I IGDGGN EKM+I HAD+PG CPEP +TPDP MGGFCA NFT +
Sbjct: 408 NYELDPCGPVYIVIGDGGNREKMAIEHADDPGKCPEPLTTPDPVMGGFCAWNFT---PSD 464
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSA RESSFGHGILE+KNETWALWTW+RNQDS+++VGDQIYIVRQPD+CP
Sbjct: 465 KFCWDRQPDYSALRESSFGHGILEMKNETWALWTWYRNQDSSSEVGDQIYIVRQPDRCPL 524
Query: 361 H 361
H
Sbjct: 525 H 525
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|O48840|PPA13_ARATH Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/369 (57%), Positives = 251/369 (68%), Gaps = 15/369 (4%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS YYFRT+P S ++YP RI + GDLGLTYNT+ + H+ SN PDLV+L+G +YA+
Sbjct: 177 MSKEYYFRTMPKSTSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADT 236
Query: 61 YLTNGTGSDCYSCSFSKTPIH----------ETYQPRWDYWGRFMQNLVSKVPIMVVEGN 110
YL N T DC SC + ETYQPRWDYWGRFM+ L + VP M+V G
Sbjct: 237 YLANKTKLDCSSCHCDQNGTSSDCGSCYSSGETYQPRWDYWGRFMEPLTANVPTMMVAGE 296
Query: 111 HEIEAQAGNQ-TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169
HEIE Q N TF AYSSRFAFPS ESGS S YYSFNAGG HFI+L +Y YD S QY
Sbjct: 297 HEIEPQTENNLTFAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQY 356
Query: 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229
WLE DL ++RS TPW+VATW PWYS++ HYREAE MR+ +E LLY+Y VDIVFN H
Sbjct: 357 IWLESDLIKINRSETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVFNSH 416
Query: 230 VHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFC 289
V AYERSNRV+NYTLD CGPV+IT G GG K+ H D+PGN P+PS Y
Sbjct: 417 VDAYERSNRVYNYTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQN---YSCRSS 472
Query: 290 ATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 349
N T P + C +QP+YSA+RESSFG GILEVKNET ALW+W+RNQD D I
Sbjct: 473 GLNSTLEPVKDETCPVKQPEYSAYRESSFGFGILEVKNETHALWSWNRNQDLYYLAADVI 532
Query: 350 YIVRQPDKC 358
+IVRQP+ C
Sbjct: 533 HIVRQPEMC 541
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/275 (66%), Positives = 217/275 (78%), Gaps = 1/275 (0%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS+ F TLP +YP RIA VGDLGLT NTT TI+H+ N+P LV++VGD+TYAN
Sbjct: 168 MSEEISFETLPLPSKDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQ 227
Query: 61 YLT-NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN 119
Y T G G C+SCSF PI ETYQPRWD WGRFM+ L SKVP MV+EGNHEIE QA
Sbjct: 228 YRTIGGKGVPCFSCSFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASG 287
Query: 120 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179
TF +YS RFA P+ ESGS S+ YYSF+AGG+HF+MLGAY+ Y+ +G QY WL++DL+ V
Sbjct: 288 ITFKSYSERFAVPASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKV 347
Query: 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239
DR+VTPWLVAT HPPWY+SYSSHY+E ECMR EME LLY Y VDIVF GHVHAYER NR+
Sbjct: 348 DRAVTPWLVATMHPPWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRI 407
Query: 240 FNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNC 274
+NYTLDPCGPV+ITIGDGGN+EK+ + AD+PG C
Sbjct: 408 YNYTLDPCGPVYITIGDGGNIEKVDVDFADDPGKC 442
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 193/339 (56%), Gaps = 61/339 (17%)
Query: 15 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 74
P ++P AIVGDLG T T T++H++S + D+ LL GD++YA
Sbjct: 136 PSTFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYA---------------- 179
Query: 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFP 132
+T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P
Sbjct: 180 -------DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMP 232
Query: 133 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWH 192
ES S S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V H
Sbjct: 233 HTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLH 292
Query: 193 PPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 252
PWY++ +H E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HI
Sbjct: 293 APWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHI 352
Query: 253 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 312
TIGDGGN E ++++ P E
Sbjct: 353 TIGDGGNREGLALSFKKPPSPLSE------------------------------------ 376
Query: 313 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 351
FRESSFGHG L+V + A W+WHRN DSN+ + D++++
Sbjct: 377 FRESSFGHGRLKVMDGKRAHWSWHRNNDSNSLLADEVWL 415
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 187/338 (55%), Gaps = 60/338 (17%)
Query: 15 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 74
P +P A+ GDLG T T T++H+ + + LL GD++YA+
Sbjct: 136 PAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYM------------- 182
Query: 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPS 133
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P
Sbjct: 183 ----------QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPY 232
Query: 134 EESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 193
EESGS S+ YYSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+ +H
Sbjct: 233 EESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHV 292
Query: 194 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHIT 253
PWY+S ++H E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHIT
Sbjct: 293 PWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHIT 352
Query: 254 IGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAF 313
IGDGGN E ++ + D PS P++S F
Sbjct: 353 IGDGGNREGLARKYKD-------PS-----------------------------PEWSVF 376
Query: 314 RESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 351
RE+SFGHG L++ N T ALWTWHRN D D++++
Sbjct: 377 REASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWL 414
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 187/351 (53%), Gaps = 67/351 (19%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTN 64
+ FRT P+ +P + A+ GDLG + + T+ H+S + D+ +L GD++YAN+Y
Sbjct: 129 FSFRTPPSK----FPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMY--- 181
Query: 65 GTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ--AGNQTF 122
QP WD +GR +Q L S+ P MV GNHE+E + F
Sbjct: 182 --------------------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPF 221
Query: 123 VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRS 182
AY+ R+ P EESGS S+ YYSFN G+H IMLG+Y ++ QY+WLE +L +DR
Sbjct: 222 TAYNKRWRMPFEESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRK 281
Query: 183 VTPWLVATWHPPWYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
TPW+VA H PWY+S +H E E M+ ME LLY VD+VF GHVHAYER +RV+
Sbjct: 282 TTPWVVAVVHAPWYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVY 341
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
D CGPV+I IGDGGNLE ++ + D
Sbjct: 342 QDKFDKCGPVYINIGDGGNLEGLATKYRDP------------------------------ 371
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 351
P+ S FRE+SFGHG L V+N T A W WHRN D + D +++
Sbjct: 372 ------NPEISLFREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWL 416
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 186/349 (53%), Gaps = 65/349 (18%)
Query: 3 DVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYL 62
D + F+T P+ +P A+ GDLG T T T++ + + D+ LL GD++YA
Sbjct: 132 DEFSFKTPPSK----FPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYA---- 183
Query: 63 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-- 120
+T+QP WD +GR ++ L S P MV EGNHEIE+ N
Sbjct: 184 -------------------DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHI 224
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
+F +Y++R+ P ES S S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VD
Sbjct: 225 SFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVD 284
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R TPWLV H PWYS+ +HY E E MR +E+LLY VD+VF GHVH YER ++
Sbjct: 285 RKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIY 344
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
N DPCGP++ITIGDGGN E +++
Sbjct: 345 NKKADPCGPMYITIGDGGNREGLAL----------------------------------- 369
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 349
+F + P S FRESSFGHG L + + A W+WHRN D + + D++
Sbjct: 370 RFKKPQSP-LSEFRESSFGHGRLRIIDHKRAHWSWHRNNDEMSSIADEV 417
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 184/363 (50%), Gaps = 72/363 (19%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYL 62
++F T P GP P ++GDLG ++++ T+ H N + VL VGD++YA+ Y
Sbjct: 143 FWFTTPPEVGPDV-PYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNY- 200
Query: 63 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ---AGN 119
P H+ RWD WGRF++ + P + GNHEI+
Sbjct: 201 ----------------PNHDNV--RWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGET 242
Query: 120 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179
+ F ++ R+ P + SGS +F+Y + I+L +Y +Y K QYKWLE++L V
Sbjct: 243 KPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKV 302
Query: 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239
+R+ TPWL+ H PWY+SY+ HY E E MRV E + VD+VF GHVHAYERS RV
Sbjct: 303 NRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERV 362
Query: 240 FNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGF 288
N D PV+ITIGDGGNLE +
Sbjct: 363 SNVAYDIVNGKCTPVRDQSAPVYITIGDGGNLEGL------------------------- 397
Query: 289 CATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQ 348
ATN T D QP+YSAFRE+SFGH L++KN T A ++WHRNQD D
Sbjct: 398 -ATNMT----------DPQPEYSAFREASFGHATLDIKNRTHAYYSWHRNQDGYAVEADS 446
Query: 349 IYI 351
+++
Sbjct: 447 MWV 449
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 180/363 (49%), Gaps = 72/363 (19%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYL 62
++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD++YA+ Y
Sbjct: 146 FWFFTPPEIGPDV-PYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTY- 203
Query: 63 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ---AGN 119
P H+ RWD WGRF + + P + GNHE++ N
Sbjct: 204 ----------------PDHD--NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGEN 245
Query: 120 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179
+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+WLE++ V
Sbjct: 246 RPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKV 305
Query: 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239
+R+ TPWL+ H PWY+SY HY E E MRV EA Y VD+VF GHVHAYERS RV
Sbjct: 306 NRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERV 365
Query: 240 FNYTL-----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGF 288
N D PV+ITIGDGGN+E ++ T EP
Sbjct: 366 SNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP----------------- 407
Query: 289 CATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQ 348
QP YSAFRE+SFGH I +KN T A + WHRN D GD+
Sbjct: 408 ------------------QPKYSAFREASFGHAIFSIKNRTHAHYGWHRNHDGYAVEGDR 449
Query: 349 IYI 351
++
Sbjct: 450 MWF 452
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 189/369 (51%), Gaps = 72/369 (19%)
Query: 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINH--MSSNEPDLVLLVGDVTYAN 59
S ++F P SGP P ++GDLG TY++ T++H M+ + VL VGD++YA+
Sbjct: 144 SRRFWFFIPPKSGPDV-PYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYAD 202
Query: 60 LYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQA 117
Y P H+ RWD WGRF++ V+ P + GNHEI+
Sbjct: 203 RY-----------------PNHDN--NRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDI 243
Query: 118 GN-QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 176
G + F + +R+ P + SGS+S +YS + I++ Y SY QYKWLEK+L
Sbjct: 244 GEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKEL 303
Query: 177 ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236
V+R+ TPWL+ H P+YSSY HY E E +RV E Y VD+VF GHVHAYERS
Sbjct: 304 QGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERS 363
Query: 237 NRVFNYTL-----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYM 285
RV N D P++ITIGDGGN E + +T +P
Sbjct: 364 ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGL-LTDMMQP-------------- 408
Query: 286 GGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKV 345
QP YSAFRE+SFGHG+LE+KN T A ++W+RNQD N
Sbjct: 409 ---------------------QPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVA 447
Query: 346 GDQIYIVRQ 354
D ++++ +
Sbjct: 448 ADSVWLLNR 456
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 373 | ||||||
| 255560127 | 566 | acid phosphatase, putative [Ricinus comm | 0.975 | 0.643 | 0.843 | 0.0 | |
| 281181750 | 543 | phytase [Lupinus albus] | 0.967 | 0.664 | 0.833 | 0.0 | |
| 351722194 | 547 | phytase precursor [Glycine max] gi|13925 | 0.967 | 0.659 | 0.831 | 0.0 | |
| 255554090 | 566 | acid phosphatase, putative [Ricinus comm | 0.962 | 0.634 | 0.824 | 0.0 | |
| 356569147 | 582 | PREDICTED: purple acid phosphatase 15-li | 0.962 | 0.616 | 0.841 | 0.0 | |
| 304421388 | 547 | phytase [Glycine max] | 0.967 | 0.659 | 0.828 | 0.0 | |
| 189311132 | 547 | phytase [Glycine max] | 0.967 | 0.659 | 0.825 | 0.0 | |
| 357462711 | 543 | Purple acid phosphatase [Medicago trunca | 0.962 | 0.661 | 0.835 | 0.0 | |
| 62177683 | 543 | phytase [Medicago truncatula] | 0.962 | 0.661 | 0.835 | 0.0 | |
| 224141249 | 542 | predicted protein [Populus trichocarpa] | 0.986 | 0.678 | 0.810 | 0.0 |
| >gi|255560127|ref|XP_002521081.1| acid phosphatase, putative [Ricinus communis] gi|223539650|gb|EEF41232.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/364 (84%), Positives = 333/364 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS + F+T+P SGP +YP RIA++GDLGLTYNTT TI+H++ N+PDLVLLVGDVTYANL
Sbjct: 183 MSGIRSFKTMPYSGPSNYPSRIAVLGDLGLTYNTTATISHVTKNKPDLVLLVGDVTYANL 242
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSFS TPIHETYQPRWDYWGRFMQNLVS+VPIMVVEGNHEIE QA NQ
Sbjct: 243 YLTNGTGSDCYSCSFSGTPIHETYQPRWDYWGRFMQNLVSRVPIMVVEGNHEIEQQARNQ 302
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPS+ESGSLS+ YYSFNAGGIHFIMLGAYI Y+KS Q+KWLE DLANVD
Sbjct: 303 TFVAYSSRFAFPSKESGSLSTMYYSFNAGGIHFIMLGAYIDYNKSADQFKWLEIDLANVD 362
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RS+TPWLVA WHPPWYSSY +HYREAECMRV ME LLYSY VDIVFNGHVHAYERSNRV+
Sbjct: 363 RSLTPWLVAVWHPPWYSSYKAHYREAECMRVAMEDLLYSYSVDIVFNGHVHAYERSNRVY 422
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+IT+GDGGN EKM++ HADEPGNCPEP +TPDPYMGGFCATNFT+GPAAG
Sbjct: 423 NYKLDPCGPVYITVGDGGNREKMAVEHADEPGNCPEPLTTPDPYMGGFCATNFTTGPAAG 482
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDS +KVGDQIYIVRQPD C
Sbjct: 483 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSTSKVGDQIYIVRQPDICRV 542
Query: 361 HGMP 364
+ P
Sbjct: 543 NPTP 546
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|281181750|dbj|BAI58054.1| phytase [Lupinus albus] | Back alignment and taxonomy information |
|---|
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/361 (83%), Positives = 332/361 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSD+YYFRT+P SGP+SYP R+A+VGDLGLTYNTT TINH++SN+PDL+LL+GDVTYANL
Sbjct: 172 MSDIYYFRTMPISGPKSYPGRVAVVGDLGLTYNTTATINHLTSNKPDLLLLIGDVTYANL 231
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSF TPIHETYQPRWDYWGRFMQNLVSKVP+MVVEGNHEIE QA ++
Sbjct: 232 YLTNGTGSDCYSCSFPHTPIHETYQPRWDYWGRFMQNLVSKVPMMVVEGNHEIEKQAEDK 291
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
FVAYSSRFAFPSEESGS S+FYYSFNAGGIHFIMLGAY Y ++G QYKWLE+DLA+VD
Sbjct: 292 QFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYTDYARTGKQYKWLERDLASVD 351
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RS TPWLVATWHPPWYS+Y +HYREAECMRV +E LLYSYGVDIV NGH+HAYERSNRV+
Sbjct: 352 RSETPWLVATWHPPWYSTYKAHYREAECMRVHIEDLLYSYGVDIVLNGHIHAYERSNRVY 411
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPVHITIGDGGN EKM+I ADEPGNCP+PSSTPDPYMGGFCATNFT GPA
Sbjct: 412 NYNLDPCGPVHITIGDGGNREKMAIKFADEPGNCPDPSSTPDPYMGGFCATNFTFGPAVS 471
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQP+YSAFRESSFG+GILEVKNETWALW+W+RNQDS N+VGDQIYIVRQP CP
Sbjct: 472 KFCWDRQPNYSAFRESSFGYGILEVKNETWALWSWYRNQDSYNEVGDQIYIVRQPHLCPI 531
Query: 361 H 361
+
Sbjct: 532 N 532
|
Source: Lupinus albus Species: Lupinus albus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351722194|ref|NP_001235188.1| phytase precursor [Glycine max] gi|13925771|gb|AAK49438.1| phytase [Glycine max] gi|297718790|gb|ADI50286.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/361 (83%), Positives = 330/361 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSD+YYFRT+P SG +SYP ++A+VGDLGLTYNTT TI H++SNEPDL+LL+GDVTYANL
Sbjct: 176 MSDIYYFRTMPISGSKSYPGKVAVVGDLGLTYNTTTTIGHLTSNEPDLLLLIGDVTYANL 235
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSF TPIHETYQPRWDYWGRFMQNLVS VPIMVVEGNHEIE QA N+
Sbjct: 236 YLTNGTGSDCYSCSFPLTPIHETYQPRWDYWGRFMQNLVSNVPIMVVEGNHEIEKQAENR 295
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPS+ESGS S+FYYSFNAGGIHFIMLGAYI+YDK+ QYKWLE+DL NVD
Sbjct: 296 TFVAYSSRFAFPSQESGSSSTFYYSFNAGGIHFIMLGAYINYDKTAEQYKWLERDLENVD 355
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RS+TPWLV TWHPPWYSSY +HYREAECMRVEME LLY+YGVDI+FNGHVHAYERSNRV+
Sbjct: 356 RSITPWLVVTWHPPWYSSYEAHYREAECMRVEMEDLLYAYGVDIIFNGHVHAYERSNRVY 415
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+IT+GDGGN EKM+I ADEPG+CP+P STPDPYMGGFCATNFT G
Sbjct: 416 NYNLDPCGPVYITVGDGGNREKMAIKFADEPGHCPDPLSTPDPYMGGFCATNFTFGTKVS 475
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSAFRESSFG+GILEVKNETWALW+W+RNQDS +VGDQIYIVRQPD CP
Sbjct: 476 KFCWDRQPDYSAFRESSFGYGILEVKNETWALWSWYRNQDSYKEVGDQIYIVRQPDICPI 535
Query: 361 H 361
H
Sbjct: 536 H 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554090|ref|XP_002518085.1| acid phosphatase, putative [Ricinus communis] gi|223542681|gb|EEF44218.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/359 (82%), Positives = 332/359 (92%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSD+Y+FRT+PASGP+S+P +IAIVGDLGLTYNTT T++H+ SN PDL+LLVGD TYANL
Sbjct: 196 MSDIYHFRTMPASGPKSFPGKIAIVGDLGLTYNTTSTVDHLISNNPDLILLVGDATYANL 255
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTG+DCY C+F +TPIHETYQPRWDYWGR+MQ L+S++PIMVVEGNHEIE QA NQ
Sbjct: 256 YLTNGTGADCYKCAFPQTPIHETYQPRWDYWGRYMQPLISRIPIMVVEGNHEIEQQAQNQ 315
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TF AYSSRFAFPS+ESGS S+FYYSFNAGGIHF+MLGAYISY+KSG QYKWLE+DLANVD
Sbjct: 316 TFAAYSSRFAFPSKESGSPSTFYYSFNAGGIHFVMLGAYISYNKSGDQYKWLERDLANVD 375
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R VTPWLVATWHPPWY++Y +HYREAECMRV ME LLY YGVD+VFNGHVHAYERSNRV+
Sbjct: 376 REVTPWLVATWHPPWYNTYKAHYREAECMRVAMEELLYKYGVDMVFNGHVHAYERSNRVY 435
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NYTLDPCGPVHIT+GDGGN EKM+ITHADEPGNCP+PS+TPD +MGGFCA NFTSGPAAG
Sbjct: 436 NYTLDPCGPVHITVGDGGNREKMAITHADEPGNCPDPSTTPDEFMGGFCAFNFTSGPAAG 495
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 359
KFCWDRQPDYSA+RESSFGHGILEVKNET ALWTWHRNQD + GDQIYIVRQ ++CP
Sbjct: 496 KFCWDRQPDYSAYRESSFGHGILEVKNETHALWTWHRNQDLYSSAGDQIYIVRQQERCP 554
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569147|ref|XP_003552767.1| PREDICTED: purple acid phosphatase 15-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/359 (84%), Positives = 327/359 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSDV+YFRT+PASGP+SYP RIA+VGDLGLTYNTT T+NHM+SN PDL+LLVGDV+ ANL
Sbjct: 167 MSDVHYFRTMPASGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSCANL 226
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTG+DCYSCSF TPIHETYQPRWDYWGR+MQ L+S VPIMV+EGNHEIE QA NQ
Sbjct: 227 YLTNGTGADCYSCSFPNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQ 286
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPSEESGS S+FYYSFNAGGIHFIMLGAYISYDKSG QYKWLE+DLA+VD
Sbjct: 287 TFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVD 346
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R VTPWL+ATWH PWYS+Y +HYREAECMRVEME LLY YGVDIVFNGHVHAYERSNRV+
Sbjct: 347 REVTPWLIATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVY 406
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NYTLDPCGPV+IT+GDGGN EKM+ITHADEPG CPEPS+TPD YMGGFCA NFTSGPA G
Sbjct: 407 NYTLDPCGPVYITVGDGGNREKMAITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAEG 466
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 359
FCWDRQPDYSAFRESSFGHGILEVKNET ALW WHRNQD GD+IYIVR+P CP
Sbjct: 467 NFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGSAGDEIYIVREPQNCP 525
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|304421388|gb|ADM32493.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/361 (82%), Positives = 329/361 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSD+YYFRT+P SG +SYP ++A+VGDLGLTYNTT TI H++SNEPDL+LL+GDVTYANL
Sbjct: 176 MSDIYYFRTMPISGSKSYPGKVAVVGDLGLTYNTTTTIGHLTSNEPDLLLLIGDVTYANL 235
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSF TPIHETYQPRWDYWGRF+QNLVS VPIMVVEGNHEIE QA N+
Sbjct: 236 YLTNGTGSDCYSCSFPLTPIHETYQPRWDYWGRFVQNLVSNVPIMVVEGNHEIEKQAENR 295
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPS+ESGS S+FYYSFNAGGIHFIMLGAYI+YDK+ QYKWLE+DL NVD
Sbjct: 296 TFVAYSSRFAFPSQESGSSSTFYYSFNAGGIHFIMLGAYINYDKTAEQYKWLERDLENVD 355
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RS+TPWLV TWHPPWYSSY +HYREAECMRVEME LLY+YGVDI FNGHVHAYERSNRV+
Sbjct: 356 RSITPWLVVTWHPPWYSSYEAHYREAECMRVEMEDLLYAYGVDITFNGHVHAYERSNRVY 415
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+IT+GDGGN EKM+I ADEPG+CP+P STPDPYMGGFCATNFT G
Sbjct: 416 NYNLDPCGPVYITVGDGGNREKMAIKFADEPGHCPDPLSTPDPYMGGFCATNFTFGTKVS 475
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSAFRESSFG+GILEVKNETWALW+W+RNQDS +VGDQIYIVRQPD CP
Sbjct: 476 KFCWDRQPDYSAFRESSFGYGILEVKNETWALWSWYRNQDSYKEVGDQIYIVRQPDICPI 535
Query: 361 H 361
H
Sbjct: 536 H 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|189311132|gb|ACD87745.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/361 (82%), Positives = 329/361 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSD+YYFRT+P SG +SYP ++A+VGDLGLTYNTT TI H++SNEPDL+LL+GDVTYANL
Sbjct: 176 MSDIYYFRTMPISGSKSYPGKVAVVGDLGLTYNTTTTIGHLTSNEPDLLLLIGDVTYANL 235
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSF TPIHETYQPRWDYWGRFMQNLVS VPIMVVEGNHEIE QA N+
Sbjct: 236 YLTNGTGSDCYSCSFPLTPIHETYQPRWDYWGRFMQNLVSNVPIMVVEGNHEIEKQAENR 295
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPS+ESGS S+FYYSFNAGGIHFIMLGAYI+YDK+ + KWLE+DL NVD
Sbjct: 296 TFVAYSSRFAFPSQESGSSSTFYYSFNAGGIHFIMLGAYINYDKTAEEDKWLERDLENVD 355
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RS+TPWLV TWHPPWYSSY +HYREAECMRVEME LLY+YGVDI+FNGHVHAYERSNRV+
Sbjct: 356 RSITPWLVVTWHPPWYSSYEAHYREAECMRVEMEDLLYAYGVDIIFNGHVHAYERSNRVY 415
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+IT+GDGGN EKM+I ADEPG+CP+P STPDPYMGGFCATNFT G
Sbjct: 416 NYNLDPCGPVYITVGDGGNREKMAIKFADEPGHCPDPLSTPDPYMGGFCATNFTFGTKVS 475
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSAFRESSFG+GILEVKNETWALW+W+RNQDS +VGDQIYIVRQPD CP
Sbjct: 476 KFCWDRQPDYSAFRESSFGYGILEVKNETWALWSWYRNQDSYKEVGDQIYIVRQPDICPI 535
Query: 361 H 361
H
Sbjct: 536 H 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462711|ref|XP_003601637.1| Purple acid phosphatase [Medicago truncatula] gi|355490685|gb|AES71888.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/359 (83%), Positives = 328/359 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSDV+YFRT+P SGP+SYP RIA+VGDLGLTYNTT T+NHM SN PDL+LLVGD +YAN+
Sbjct: 175 MSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLILLVGDASYANM 234
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSFS TPIHETYQPRWDYWGR+M+ L+S VP+MVVEGNHEIE QA N+
Sbjct: 235 YLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMEPLISSVPVMVVEGNHEIEEQAENK 294
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPSEESGS S+ YYSFNAGGIHFIMLG+YISYDKSG QYKWLEKDLA++D
Sbjct: 295 TFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYISYDKSGDQYKWLEKDLASLD 354
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R VTPWLVATWH PWYS+Y SHYREAECMRV ME LLY YGVDIVFNGHVHAYERSNRV+
Sbjct: 355 REVTPWLVATWHAPWYSTYKSHYREAECMRVNMEDLLYKYGVDIVFNGHVHAYERSNRVY 414
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NYTLDPCGPV+IT+GDGGN EKM+ITHADEPGNCPEP +TPD +M GFCA NFTSGPAAG
Sbjct: 415 NYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPLTTPDKFMRGFCAFNFTSGPAAG 474
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 359
KFCWD+QPDYSAFRESSFGHGILEVKNET ALW+W+RNQD GD+IYIVRQPDKCP
Sbjct: 475 KFCWDQQPDYSAFRESSFGHGILEVKNETHALWSWNRNQDYYGTAGDEIYIVRQPDKCP 533
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|62177683|gb|AAX71115.1| phytase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/359 (83%), Positives = 328/359 (91%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MSDV+YFRT+P SGP+SYP RIA+VGDLGLTYNTT T+NHM SN PDL+LLVGD +YAN+
Sbjct: 175 MSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLILLVGDASYANM 234
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTGSDCYSCSFS TPIHETYQPRWDYWGR+M+ L+S VP+MVVEGNHEIE QA N+
Sbjct: 235 YLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMEPLISSVPVMVVEGNHEIEEQAVNK 294
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPSEESGS S+ YYSFNAGGIHFIMLG+YISYDKSG QYKWLEKDLA++D
Sbjct: 295 TFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYISYDKSGDQYKWLEKDLASLD 354
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R VTPWLVATWH PWYS+Y SHYREAECMRV ME LLY YGVDIVFNGHVHAYERSNRV+
Sbjct: 355 REVTPWLVATWHAPWYSTYKSHYREAECMRVNMEDLLYKYGVDIVFNGHVHAYERSNRVY 414
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NYTLDPCGPV+IT+GDGGN EKM+ITHADEPGNCPEP +TPD +M GFCA NFTSGPAAG
Sbjct: 415 NYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPLTTPDKFMRGFCAFNFTSGPAAG 474
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 359
KFCWD+QPDYSAFRESSFGHGILEVKNET ALW+W+RNQD GD+IYIVRQPDKCP
Sbjct: 475 KFCWDQQPDYSAFRESSFGHGILEVKNETHALWSWNRNQDYYGTAGDEIYIVRQPDKCP 533
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141249|ref|XP_002323987.1| predicted protein [Populus trichocarpa] gi|222866989|gb|EEF04120.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/369 (81%), Positives = 329/369 (89%), Gaps = 1/369 (0%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS YYF+T+PASGP+SYP RIAIVGDLGLTYNTT T++H+ N PDL+LLVGDV YANL
Sbjct: 174 MSSKYYFKTMPASGPKSYPSRIAIVGDLGLTYNTTSTVDHVIGNNPDLILLVGDVCYANL 233
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGTG+DCYSCSFS+TPIHETYQPRWDYWGR+MQ + SK+PIMVVEGNHEIE Q NQ
Sbjct: 234 YLTNGTGADCYSCSFSQTPIHETYQPRWDYWGRYMQPVTSKIPIMVVEGNHEIEKQVENQ 293
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TFVAYSSRFAFPS+ESGS S+FYYSFNAGGIHFIMLG YI+Y+KS HQYKWL+KDLA VD
Sbjct: 294 TFVAYSSRFAFPSKESGSSSTFYYSFNAGGIHFIMLGGYIAYNKSAHQYKWLKKDLAKVD 353
Query: 181 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R VTPWLVATWHPPWYS+Y +HYREAECMR ME LLY YGVDI+FNGH+HAYERSNRV+
Sbjct: 354 RKVTPWLVATWHPPWYSTYKAHYREAECMRTAMEDLLYQYGVDIIFNGHIHAYERSNRVY 413
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NYTLDPCGPVHIT+GDGGN EKM+I HADEP NCP+PS+TPD YMGGFCA NFTSGPAAG
Sbjct: 414 NYTLDPCGPVHITVGDGGNREKMAIAHADEPRNCPDPSTTPDEYMGGFCAFNFTSGPAAG 473
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSA+RESSFGHGI EVKNET ALWTWHRNQD N GDQIYIVRQP++CP
Sbjct: 474 KFCWDRQPDYSAYRESSFGHGIFEVKNETHALWTWHRNQDMYNSPGDQIYIVRQPERCPT 533
Query: 361 H-GMPQPKP 368
MP +P
Sbjct: 534 EPKMPTREP 542
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 373 | ||||||
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.959 | 0.672 | 0.759 | 9.9e-158 | |
| TAIR|locus:2046407 | 545 | PAP13 "purple acid phosphatase | 0.949 | 0.649 | 0.558 | 5.8e-105 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.522 | 0.449 | 0.477 | 3.6e-69 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.495 | 0.423 | 0.505 | 1.7e-65 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.498 | 0.435 | 0.478 | 5.6e-65 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.493 | 0.421 | 0.467 | 9.8e-62 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.659 | 0.525 | 0.367 | 2.3e-52 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.667 | 0.534 | 0.363 | 7.7e-52 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.667 | 0.534 | 0.339 | 9.8e-48 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.646 | 0.507 | 0.332 | 1.4e-46 |
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 274/361 (75%), Positives = 308/361 (85%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS +++FRT+P S P SYP RIA+VGDLGLTYNTT TI+H+ N PDL+LL+GDV+YANL
Sbjct: 168 MSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYNTTDTISHLIHNSPDLILLIGDVSYANL 227
Query: 61 YLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ 120
YLTNGT SDCYSCSF +TPIHETYQPRWDYWGRFM+NL SKVP+MV+EGNHEIE QA N+
Sbjct: 228 YLTNGTSSDCYSCSFPETPIHETYQPRWDYWGRFMENLTSKVPLMVIEGNHEIELQAENK 287
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
TF AYSSRFAFP ESGS S+ YYSFNAGGIHF+MLGAYI+YDKS QY+WL+KDLA VD
Sbjct: 288 TFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVD 347
Query: 181 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
RSVTPWLVA+ REAECM+ ME LLYSYG DIVFNGHVHAYERSNRV+
Sbjct: 348 RSVTPWLVASWHPPWYSSYTAHYREAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVY 407
Query: 241 NYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAG 300
NY LDPCGPV+I IGDGGN EKM+I HAD+PG CPEP +TPDP MGGFCA NFT P+
Sbjct: 408 NYELDPCGPVYIVIGDGGNREKMAIEHADDPGKCPEPLTTPDPVMGGFCAWNFT--PS-D 464
Query: 301 KFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPF 360
KFCWDRQPDYSA RESSFGHGILE+KNETWALWTW+RNQDS+++VGDQIYIVRQPD+CP
Sbjct: 465 KFCWDRQPDYSALRESSFGHGILEMKNETWALWTWYRNQDSSSEVGDQIYIVRQPDRCPL 524
Query: 361 H 361
H
Sbjct: 525 H 525
|
|
| TAIR|locus:2046407 PAP13 "purple acid phosphatase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 206/369 (55%), Positives = 242/369 (65%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANL 60
MS YYFRT+P S ++YP RI + GDLGLTYNT+ + H+ SN PDLV+L+G +YA+
Sbjct: 177 MSKEYYFRTMPKSTSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADT 236
Query: 61 YLTNGTGSDCYSCSFSKTPIH----------ETYQPRWDYWGRFMQNLVSKVPIMVVEGN 110
YL N T DC SC + ETYQPRWDYWGRFM+ L + VP M+V G
Sbjct: 237 YLANKTKLDCSSCHCDQNGTSSDCGSCYSSGETYQPRWDYWGRFMEPLTANVPTMMVAGE 296
Query: 111 HEIEAQAGNQ-TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169
HEIE Q N TF AYSSRFAFPS ESGS S YYSFNAGG HFI+L +Y YD S QY
Sbjct: 297 HEIEPQTENNLTFAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQY 356
Query: 170 KWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGH 229
WLE DL ++RS TPW+VAT REAE MR+ +E LLY+Y VDIVFN H
Sbjct: 357 IWLESDLIKINRSETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVFNSH 416
Query: 230 VHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFC 289
V AYERSNRV+NYTLD CGPV+IT G GG K+ H D+PGN P+PS G
Sbjct: 417 VDAYERSNRVYNYTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQNYSCRSSGL- 474
Query: 290 ATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 349
N T P + C +QP+YSA+RESSFG GILEVKNET ALW+W+RNQD D I
Sbjct: 475 --NSTLEPVKDETCPVKQPEYSAYRESSFGFGILEVKNETHALWSWNRNQDLYYLAADVI 532
Query: 350 YIVRQPDKC 358
+IVRQP+ C
Sbjct: 533 HIVRQPEMC 541
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 3.6e-69, Sum P(3) = 3.6e-69
Identities = 94/197 (47%), Positives = 124/197 (62%)
Query: 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFPSEESGSL 139
+T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P ES S
Sbjct: 180 DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFST 239
Query: 140 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 199
S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V
Sbjct: 240 SNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTN 299
Query: 200 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259
E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HITIGDGGN
Sbjct: 300 EAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGN 359
Query: 260 LEKMSITHADEPGNCPE 276
E ++++ P E
Sbjct: 360 REGLALSFKKPPSPLSE 376
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 1.7e-65, Sum P(3) = 1.7e-65
Identities = 94/186 (50%), Positives = 116/186 (62%)
Query: 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFY 143
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P EESGS S+ Y
Sbjct: 183 QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLY 242
Query: 144 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXX 203
YSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+
Sbjct: 243 YSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQ 302
Query: 204 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 263
E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHITIGDGGN E +
Sbjct: 303 HEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGL 362
Query: 264 SITHAD 269
+ + D
Sbjct: 363 ARKYKD 368
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 5.6e-65, Sum P(3) = 5.6e-65
Identities = 91/190 (47%), Positives = 115/190 (60%)
Query: 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSS 141
YQP WD +GR +Q L S+ P MV GNHE+E + F AY+ R+ P EESGS S+
Sbjct: 181 YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSN 240
Query: 142 FYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXX 201
YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA
Sbjct: 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEA 300
Query: 202 XXREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259
E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I IGDGGN
Sbjct: 301 HQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGN 360
Query: 260 LEKMSITHAD 269
LE ++ + D
Sbjct: 361 LEGLATKYRD 370
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 457 (165.9 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 87/186 (46%), Positives = 115/186 (61%)
Query: 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFPSEESGSL 139
+T+QP WD +GR ++ L S P MV EGNHEIE+ N +F +Y++R+ P ES S
Sbjct: 184 DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSH 243
Query: 140 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 199
S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VDR TPWLV
Sbjct: 244 SNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTN 303
Query: 200 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259
E E MR +E+LLY VD+VF GHVH YER ++N DPCGP++ITIGDGGN
Sbjct: 304 KAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGN 363
Query: 260 LEKMSI 265
E +++
Sbjct: 364 REGLAL 369
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 104/283 (36%), Positives = 145/283 (51%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYL 62
++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD++YA+ Y
Sbjct: 146 FWFFTPPEIGPD-VPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTY- 203
Query: 63 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAG-N 119
P H+ RWD WGRF + + P + GNHE++ + G N
Sbjct: 204 ----------------PDHDNR--RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGEN 245
Query: 120 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179
+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+WLE++ V
Sbjct: 246 RPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKV 305
Query: 180 DRSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239
+R+ TPWL+ E E MRV EA Y VD+VF GHVHAYERS RV
Sbjct: 306 NRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERV 365
Query: 240 FN--YTL---------DPCGPVHITIGDGGNLEKMSITHADEP 271
N Y + D PV+ITIGDGGN+E ++ T EP
Sbjct: 366 SNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP 407
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 105/289 (36%), Positives = 144/289 (49%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLT 63
+ F T P GP P I+GDLG TY + T+ H SN + VL GD++YA+ +
Sbjct: 143 FSFTTPPKIGPD-VPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDH-- 199
Query: 64 NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGN-Q 120
P H+ Q +WD WGRFM+ + P + GNHEI+ G
Sbjct: 200 ---------------PNHD--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPH 242
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
F Y+ R+ + S S S +YS H I+L +Y +Y K QY WLE++L NV+
Sbjct: 243 AFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVN 302
Query: 181 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R TPWL+ E E MRV E+ L + VD+V +GHVHAYERS R+
Sbjct: 303 REETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
Query: 241 N--YTL---------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 278
N Y + DP P++ITIGDGGN+E ++ + D P+PS
Sbjct: 363 NIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVD-----PQPS 406
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 98/289 (33%), Positives = 139/289 (48%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLT 63
+ F + P GP P I+GDLG T + T+ H SN + VL GD++YA+ +
Sbjct: 143 FSFTSPPKVGPD-VPYTFGIIGDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDH-- 199
Query: 64 NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGN-Q 120
P H+ Q +WD WGRF++ + + GNHEI+ G
Sbjct: 200 ---------------PNHD--QRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPH 242
Query: 121 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 180
F Y R+ + S S+S +YS H I+L +Y +Y K QY WLE++L V+
Sbjct: 243 AFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVN 302
Query: 181 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240
R TPWL+ E E MR E+ + VD+V +GHVH+YERS RV
Sbjct: 303 REETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVS 362
Query: 241 N--YTL---------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 278
N Y + DP P++ITIGDGGN+E ++ + D P+PS
Sbjct: 363 NIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTD-----PQPS 406
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 362 (132.5 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 91/274 (33%), Positives = 129/274 (47%)
Query: 5 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTN 64
++F T P P + K I+GD+G T+N+ T+ H + VL +GD++YA+ Y N
Sbjct: 141 FWFVTPPHVHPDASYK-FGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRYQYN 199
Query: 65 GTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQT- 121
G RWD WGRF++ + P + GNHE++ G T
Sbjct: 200 DVGV------------------RWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTP 241
Query: 122 FVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDR 181
F Y R+ P S S S +Y+ H I+L +Y + K Q+ WL ++L VDR
Sbjct: 242 FRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDR 301
Query: 182 SVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 241
TPWL+ E E MR E + VD++F GHVHAYERS R+ N
Sbjct: 302 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISN 361
Query: 242 --YTL---------DPCGPVHITIGDGGNLEKMS 264
Y + D PV+IT+GDGGN E ++
Sbjct: 362 VRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLA 395
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SFU3 | PPA15_ARATH | 3, ., 1, ., 3, ., 2 | 0.7867 | 0.9597 | 0.6729 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 373 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 3e-99 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 2e-84 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 4e-20 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 7e-12 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 1e-09 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 7e-09 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 2e-07 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 2e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 295 bits (758), Expect = 3e-99
Identities = 125/352 (35%), Positives = 164/352 (46%), Gaps = 76/352 (21%)
Query: 18 YPKRIAIVGDLGL-TYNTTCTINHM--SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 74
P + A+ GD+G T N+T T++H+ D +L VGD+ YA+ Y
Sbjct: 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN----------- 51
Query: 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE 134
RWD + R ++ L S VP MV GNHE + A+ RF FP
Sbjct: 52 ----------GSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHS 101
Query: 135 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH---QYKWLEKDLANVDRSVTPWLVATW 191
SGS S+ +YSF+ G +HF+ L + + G QY WLE DLA VDRS TPW++
Sbjct: 102 PSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMG 161
Query: 192 HPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL----- 244
H P Y S + H E E MR +E L Y YGVD+V +GHVHAYER+ V+N T+
Sbjct: 162 HRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221
Query: 245 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 301
+P GPVHI IG GGN E + A
Sbjct: 222 PYSNPKGPVHIVIGAGGNDEGLDPFSAPP------------------------------- 250
Query: 302 FCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 353
P +SAFRES +G G L V N T + W RN D V D +I++
Sbjct: 251 ------PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDD--GVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 2e-84
Identities = 141/361 (39%), Positives = 189/361 (52%), Gaps = 72/361 (19%)
Query: 4 VYYFRT-LPASG--------PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGD 54
VYY++ P+S P +P + A+ GDLG + T T+ H+S + D+ +L GD
Sbjct: 115 VYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGD 174
Query: 55 VTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114
++YAN Y QP WD +GR +Q L S+ P MV GNHE+E
Sbjct: 175 LSYANFY-----------------------QPLWDTFGRLVQPLASQRPWMVTHGNHELE 211
Query: 115 A--QAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 172
+ F AY++R+ P EESGS S+ YYSFN G+H IMLG+Y ++ QY+WL
Sbjct: 212 KIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWL 271
Query: 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHV 230
E +L +DR TPW+VA H PWY+S +H E E M+ ME LLY VD+VF GHV
Sbjct: 272 ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHV 331
Query: 231 HAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCA 290
HAYER +RV+ D CGPV+ITIGDGGN E ++ + D
Sbjct: 332 HAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDP-------------------- 371
Query: 291 TNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIY 350
+PD S FRE+SFGHG L V + WTWHRN D + D ++
Sbjct: 372 ----------------KPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVW 415
Query: 351 I 351
+
Sbjct: 416 L 416
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 86.7 bits (214), Expect = 4e-20
Identities = 39/217 (17%), Positives = 66/217 (30%), Gaps = 36/217 (16%)
Query: 21 RIAIVGDLGLTYNTTCTINHM----SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 76
RI ++GDL + + + +PDLVL +GD+
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP--------------- 45
Query: 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 136
F L + P+ +V GNH+ ++ F + +
Sbjct: 46 ---------SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVL--- 93
Query: 137 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 196
+ G + I L + ++LE + ++ + H P
Sbjct: 94 -----GNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLS 148
Query: 197 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 233
S S +E LL GVD+V GH H
Sbjct: 149 PSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 7e-12
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 43/102 (42%)
Query: 248 GPVHITIGDGGN-LEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDR 306
PVHI +G GN L+ D
Sbjct: 2 APVHIVVGAAGNGLDPF----------------------------------------PDP 21
Query: 307 QPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQ 348
QP +SAFR+S +G+G L V N T W + R+ D V D
Sbjct: 22 QPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDD--GTVLDS 61
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 63/275 (22%), Positives = 90/275 (32%), Gaps = 81/275 (29%)
Query: 21 RIAIVGDLG--LTYNTTCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 74
R +GD G T M+ PD +L +GD N Y G
Sbjct: 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGD----NFY---DDG------- 47
Query: 75 FSKTPIHETYQPRWD------YWGRFMQNLVSKVPIMVVEGNHE----IEAQAGNQTFVA 124
+ PR++ Y +Q VP +V GNH+ + AQ + T
Sbjct: 48 -----VGSVDDPRFETTFEDVYSAPSLQ-----VPWYLVLGNHDYSGNVSAQI-DYTKRP 96
Query: 125 YSSRFAFPSEESGSLSSFYYSFNAGG------IHFIML-------------GAYISYDKS 165
S R+ P+ +YY + + FIM+ Y +
Sbjct: 97 NSPRWTMPA--------YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGK 148
Query: 166 GH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVD 223
Q WLEK LA S W + H P YSS + C+ + LL Y VD
Sbjct: 149 LAEEQLAWLEKTLAA---STADWKIVVGHHPIYSS--GEHGPTSCLVDRLLPLLKKYKVD 203
Query: 224 IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258
+GH H + + D G + G G
Sbjct: 204 AYLSGHDHNLQ------HIKDDGSGTSFVVSGAGS 232
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 42/160 (26%)
Query: 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSL--SSF---YYSFN 147
+ L +P++ V GNH++ GN P+EES F Y+SF
Sbjct: 78 DVLSLLDPDIPLVCVCGNHDV----GNT-----------PTEESIKDYRDVFGDDYFSFW 122
Query: 148 AGGIHFIMLGAYISYDKSG------HQYKWLEKDLANVDRSVTPWLVATWHPPW------ 195
GG+ FI+L + + +D S Q WLE+ L S ++ H PW
Sbjct: 123 VGGVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPD 182
Query: 196 ----YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231
Y + R+ + GV VF+GH H
Sbjct: 183 EEDSYFNIPKSVRK------PLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 2e-07
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 13/100 (13%)
Query: 163 DKSGHQYKWLEKDLANVDRSVTPWL-------VATWHPPWYSSYSSHYREAECMRVEMEA 215
+ L LA + P + H P Y + + +
Sbjct: 38 GDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLE 97
Query: 216 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 255
LL YGVD+V +GH H YER D G ++I G
Sbjct: 98 LLEKYGVDLVLSGHTHVYER------REPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 47/237 (19%)
Query: 20 KRIAIVGDL---GLTYNTT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 72
RIA + DL L ++ + + +PDL+++ GD+T D
Sbjct: 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTN-----------DGEP 49
Query: 73 CSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFP 132
+ + + L P++VV GNH+ G A+S +F
Sbjct: 50 EEY------RRLK-------ELLARLELPAPVIVVPGNHDARVVNGE----AFSDQFFNR 92
Query: 133 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH----QYKWLEKDLANVDRSVTPWLV 188
S GG I L + + G Q WLE+ LA +V
Sbjct: 93 YAVLVGACSS------GGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146
Query: 189 ATWHPPWYSSYSSHYREAECM-RVEMEALL-YSYGVDIVFNGHVHAYERSNRVFNYT 243
H P S + R A ++ L+ + V +V +GH+H ++ N T
Sbjct: 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGT 203
|
Length = 301 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.95 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.94 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.93 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.92 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.86 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.86 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.8 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.78 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.78 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.78 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.77 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.77 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.77 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.73 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.73 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.68 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.67 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.65 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.65 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.65 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.64 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.63 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.61 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.58 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.54 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.47 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.46 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.45 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.42 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.37 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.34 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.32 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.32 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.31 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.3 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.28 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.23 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.23 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.22 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.19 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.18 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.17 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.16 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.15 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.11 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.07 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.05 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.01 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.0 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.0 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.93 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.89 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.89 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.88 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.88 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.86 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.82 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.82 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.79 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.73 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.65 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.63 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.6 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.59 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.57 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.57 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.57 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.54 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.52 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.52 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.49 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.36 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.36 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.29 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.24 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.2 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.19 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.18 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.15 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.13 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.02 | |
| PHA02239 | 235 | putative protein phosphatase | 98.01 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.0 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.98 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.97 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.87 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.85 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.85 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.75 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.67 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.67 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.59 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.58 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.54 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.53 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.53 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.52 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.49 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.46 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.37 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.33 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.26 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.2 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.1 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.9 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 96.87 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.76 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 96.71 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.33 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.25 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.24 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.03 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.02 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.85 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.71 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.69 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.46 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.15 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.12 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.07 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 94.61 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.48 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 93.51 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 88.2 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-61 Score=455.14 Aligned_cols=298 Identities=44% Similarity=0.750 Sum_probs=260.6
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
||++|+|+|+| ++ ..+.+++++||++.......++..+.+. ++|+|||+|||+|++.+.+
T Consensus 132 wS~~f~F~t~p--~~-~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n---------------- 192 (452)
T KOG1378|consen 132 WSEIFSFKTPP--GQ-DSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN---------------- 192 (452)
T ss_pred cccceEeECCC--Cc-cCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc----------------
Confidence 89999999999 22 2479999999999887776677666554 5999999999999864310
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 159 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~ 159 (373)
.+||.|.++++++++.+|+|++.||||....... .|..|..||.||.++..+..+.||||++|++|||+|+|+
T Consensus 193 ------~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse 265 (452)
T KOG1378|consen 193 ------WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTE 265 (452)
T ss_pred ------cchHHHHhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEecc
Confidence 4899999999999999999999999999765443 689999999999988877788999999999999999999
Q ss_pred ccC--CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCC-CccchH--HHHHHHHHHHHHcCccEEEecccccee
Q 017367 160 ISY--DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS-HYREAE--CMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 160 ~~~--~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~-~~~~~~--~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.++ ....+|++||+++|++++|.++||+||+.|+|+|++... ++.+.+ .++..|++||.+++||++|+||.|+||
T Consensus 266 ~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YE 345 (452)
T KOG1378|consen 266 TYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYE 345 (452)
T ss_pred ccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehh
Confidence 875 346899999999999999876899999999999998764 455444 678899999999999999999999999
Q ss_pred eeeecccCcc----------CCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccc
Q 017367 235 RSNRVFNYTL----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCW 304 (373)
Q Consensus 235 r~~p~~~~~~----------~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
|++|+++.++ ++.+++||++|.||+.++.+.. +
T Consensus 346 R~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~--------------------------~----------- 388 (452)
T KOG1378|consen 346 RFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPF--------------------------S----------- 388 (452)
T ss_pred ccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcc--------------------------c-----------
Confidence 9999999877 7889999999999998875431 0
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCCCCCC
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFH 361 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~~~~~ 361 (373)
.++|+||+||+.+|||++|++.|+||+.|+|+++.|.++++.|+|||+|+...|...
T Consensus 389 ~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~ 445 (452)
T KOG1378|consen 389 SPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVG 445 (452)
T ss_pred CCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccc
Confidence 368999999999999999999999999999999988889999999999998776643
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-58 Score=449.76 Aligned_cols=294 Identities=47% Similarity=0.866 Sum_probs=253.1
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 80 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~ 80 (373)
+|++|+|+|+|.. .++||+++||+|.......+++.+.+.+|||||++||++|++
T Consensus 125 ~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~GDl~y~~--------------------- 179 (427)
T PLN02533 125 STQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYAN--------------------- 179 (427)
T ss_pred CccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEcCcccccc---------------------
Confidence 3688999998853 379999999999766566788999889999999999999853
Q ss_pred cccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCC--CCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcc
Q 017367 81 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA 158 (373)
Q Consensus 81 ~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt 158 (373)
.|+.+|+.|.+.++++.+.+|+|+++||||..... ....+..|.++|.||..+.+...+.||||++|++|||+||+
T Consensus 180 --~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds 257 (427)
T PLN02533 180 --FYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGS 257 (427)
T ss_pred --chHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeC
Confidence 13568999999999998899999999999986432 23467788899999987666667899999999999999999
Q ss_pred cccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc--hHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 159 YISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 159 ~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
+.++....+|++||+++|++++++++||+||++|+|+|++...+... ...+++.|++||.+++|+++|+||+|.|||+
T Consensus 258 ~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~ 337 (427)
T PLN02533 258 YTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERF 337 (427)
T ss_pred CccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccccc
Confidence 98877889999999999999887788999999999999876443222 2346789999999999999999999999999
Q ss_pred eecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccC
Q 017367 237 NRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 316 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (373)
+|++++++++.|++||++|+||+.++.... + ..++|+|++||+.
T Consensus 338 ~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~--------------------------~----------~~~~~~~s~~r~~ 381 (427)
T PLN02533 338 DRVYQGKTDKCGPVYITIGDGGNREGLATK--------------------------Y----------IDPKPDISLFREA 381 (427)
T ss_pred ccccCCccCCCCCEEEEeCCCccccccccc--------------------------c----------CCCCCCceeEEec
Confidence 999999999999999999999998764310 0 1467889999999
Q ss_pred CceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCC
Q 017367 317 SFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDK 357 (373)
Q Consensus 317 ~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~ 357 (373)
+|||++|+|.|.|||.|+|++++|+++.|.|+|||.|...+
T Consensus 382 ~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~ 422 (427)
T PLN02533 382 SFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE 422 (427)
T ss_pred cCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC
Confidence 99999999999999999999998887789999999998653
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=365.03 Aligned_cols=276 Identities=44% Similarity=0.759 Sum_probs=219.4
Q ss_pred CCeEEEEEecCCCC-CChHHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 18 YPKRIAIVGDLGLT-YNTTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 18 ~~~r~~~igD~h~~-~~~~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.++||+++||+|.. .....++++|.+ .+|||||++||++|... . ..+.+|+.|.+.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~-----~----------------~~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADG-----Y----------------NNGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcC-----C----------------ccchhHHHHHHH
Confidence 37999999999973 456778888887 69999999999998532 1 012578889999
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC---CCChHHHHH
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY---DKSGHQYKW 171 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~---~~~~~Q~~W 171 (373)
++++...+|+++++||||............+..++.++........+.||+|++|+++||+|||+... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99988889999999999987543222111111123333333334567899999999999999998765 568999999
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc------
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT------ 243 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~------ 243 (373)
|+++|+++.+.+.+|+||++|+|+++....... .....++.|.++|++++|+++|+||+|.|+|++|+++.+
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987666789999999999987543322 235678899999999999999999999999999998754
Q ss_pred --cCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeE
Q 017367 244 --LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 321 (373)
Q Consensus 244 --~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~ 321 (373)
.+++|++||++|+||+.++.... ..+.++|++++...+||+
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPF-------------------------------------SAPPPAWSAFRESDYGFG 264 (294)
T ss_pred cccCCCccEEEEECCCccccCcCcc-------------------------------------cCCCCCceEEEeccCCEE
Confidence 36789999999999998653210 012357999999999999
Q ss_pred EEEEecCCeEEEEEEEecCCCceeeEEEEEEe
Q 017367 322 ILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 353 (373)
Q Consensus 322 ~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k 353 (373)
+|+|.|+|+|.++|+++.+| +|+|+|+|+|
T Consensus 265 ~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 265 RLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 99999999999999998877 9999999987
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=276.13 Aligned_cols=262 Identities=19% Similarity=0.302 Sum_probs=190.6
Q ss_pred CeEEEEEecCCCCCChHHHHH----HHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH-HH
Q 017367 19 PKRIAIVGDLGLTYNTTCTIN----HMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 92 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~----~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~-~~ 92 (373)
.+||+++||+|.+...+..++ ++. +.++||||.+||++ .+ |.. ....++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~-----Gv~--------------sv~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PG-----GVD--------------GLNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cC-----CCC--------------CccchhHHhhHh
Confidence 599999999997655544433 332 35899999999998 33 321 111344544 55
Q ss_pred HHHhhhh--cCCCeEEecCCCCcCCCCCCcc--hh------------------hhhcccCCCCCCCCCCCcceEEE----
Q 017367 93 RFMQNLV--SKVPIMVVEGNHEIEAQAGNQT--FV------------------AYSSRFAFPSEESGSLSSFYYSF---- 146 (373)
Q Consensus 93 ~~l~~l~--~~~P~~~v~GNHD~~~~~~~~~--~~------------------~~~~~~~~p~~~~~~~~~~~ys~---- 146 (373)
++..... ..+||++|+||||+.++...+. +. ....||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 6665543 5799999999999976544321 11 1135787775 57754
Q ss_pred Ee-------------CCEEEEEEcccccC------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchH
Q 017367 147 NA-------------GGIHFIMLGAYISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 207 (373)
Q Consensus 147 ~~-------------g~~~fi~ldt~~~~------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~ 207 (373)
.. ..+.||++||.... ....+|++||+++|+.+. +..+|+||++|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~-k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAP-KIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhc-cCCCeEEEEecCceeecCCC--CCCH
Confidence 22 12899999996321 235789999999997553 45689999999999998642 3345
Q ss_pred HHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCC
Q 017367 208 CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGG 287 (373)
Q Consensus 208 ~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (373)
+++..|++||++|+|+++|+||.|++|+.. .+|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 688899999999999999999999999973 56899999999988543110
Q ss_pred ccccccccCCCCCCcccCCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCCCCCCC
Q 017367 288 FCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFHG 362 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~~~~~~ 362 (373)
...+|++|....+||..+++ +++.|+++|+...+| ++++++++.|-.-+-.+.|
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~~~~~~~~ 338 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKKRKLRFQG 338 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccchhhhhhc
Confidence 12356788888899999998 888999999975566 9999999977665544444
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=256.34 Aligned_cols=244 Identities=24% Similarity=0.367 Sum_probs=171.8
Q ss_pred eEEEEEecCCCC-CC-hH---HHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH-HHHH
Q 017367 20 KRIAIVGDLGLT-YN-TT---CTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYWG 92 (373)
Q Consensus 20 ~r~~~igD~h~~-~~-~~---~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~-~~~~ 92 (373)
++|+++||++.. .. .. ..|.++. +.+|||||++||++|+++.. ..+...| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~-------------------~~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVG-------------------SVDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCC-------------------CCcchHHHHHHH
Confidence 489999999975 22 22 2333333 36999999999999864321 0111233 3355
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCc-chhh--hhcccCCCCCCCCCCCcceEEEEeC------CEEEEEEcccccC-
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVA--YSSRFAFPSEESGSLSSFYYSFNAG------GIHFIMLGAYISY- 162 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~-~~~~--~~~~~~~p~~~~~~~~~~~ys~~~g------~~~fi~ldt~~~~- 162 (373)
+.++.+..++|+++++||||+....... .+.. +..+|.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555554689999999999987432111 1111 1223333 3478999988 7999999997532
Q ss_pred --------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEec
Q 017367 163 --------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 228 (373)
Q Consensus 163 --------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~G 228 (373)
....+|++||+++|+++.+ +|+||++|+|+++..... .....++.|.+++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~---~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAASTA---DWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcCC---CeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeC
Confidence 2368999999999998753 689999999998764322 224568899999999999999999
Q ss_pred cccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCC
Q 017367 229 HVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQP 308 (373)
Q Consensus 229 H~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
|+|.+++..+ ...++.||++|+||...+.... . ....|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~---------~---------------------------~~~~~ 246 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKH---------I---------------------------DKVPQ 246 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCc---------c---------------------------Ccccc
Confidence 9999998853 2359999999998886532210 0 01234
Q ss_pred CccccccCCceeEEEEEecCCeEEEEEEEe
Q 017367 309 DYSAFRESSFGHGILEVKNETWALWTWHRN 338 (373)
Q Consensus 309 ~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~ 338 (373)
+|.+++...+||++++| ..+.|.++|+..
T Consensus 247 ~~~~~~~~~~Gy~~i~v-~~~~l~~~~~~~ 275 (277)
T cd07378 247 FFSGFTSSGGGFAYLEL-TKEELTVRFYDA 275 (277)
T ss_pred cccccccCCCCEEEEEE-ecCEEEEEEECC
Confidence 68888889999999999 566899999853
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=236.42 Aligned_cols=204 Identities=23% Similarity=0.366 Sum_probs=147.0
Q ss_pred CeEEEEEecCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN-----------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----------------~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
+++|+++||+|.+.. ..++++.+.+. +||+||++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999997731 13445666665 99999999999953 221
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 159 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~ 159 (373)
.+..+.+++.+.+.++.+...+|+++++||||+........+..|...| +..||+++.++++||+|||.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 1111245677777777776689999999999986433222333444333 34589999999999999996
Q ss_pred ccC------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc----cchHHHHHHHHHHHHHcCccEEEecc
Q 017367 160 ISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY----REAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 160 ~~~------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
... ....+|++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 23579999999999998634455799999999975432211 12245678999999999999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
+|...+.. -.|+.+++++++|.
T Consensus 215 ~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 215 YHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred cccCCceE--------ECCEEEEEcCceec
Confidence 99877642 34788888877765
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=198.93 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=165.7
Q ss_pred CCeEEEEEecCCCCC--ChHH---HHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHH
Q 017367 18 YPKRIAIVGDLGLTY--NTTC---TINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 91 (373)
Q Consensus 18 ~~~r~~~igD~h~~~--~~~~---~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~ 91 (373)
..++|+++||++... +... .+..|. +.++||||-+||.+|.++..+. .|+++++ .|
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-----------~Dp~Fq~-------sF 103 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-----------NDPRFQD-------SF 103 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-----------CChhHHh-------hh
Confidence 369999999999543 3222 334443 3589999999999997543211 1122222 24
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCCcc---hhhhhcccCCCCCCCCCCCcceEE----EE--eCCEEEEEEcccccC
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQT---FVAYSSRFAFPSEESGSLSSFYYS----FN--AGGIHFIMLGAYISY 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~ys----~~--~g~~~fi~ldt~~~~ 162 (373)
.++...-....|||.|+||||+.++...+. +.....||..|.. ||. .+ .-++.+.++++....
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~ 175 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLC 175 (336)
T ss_pred hhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheecc
Confidence 444443334679999999999988765442 4455567755531 221 11 113344444443211
Q ss_pred C--------------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEec
Q 017367 163 D--------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 228 (373)
Q Consensus 163 ~--------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~G 228 (373)
. ....++.||+..|++. .++|+||.+|||+.+.+ +.+.+.++.+.|.++|+.++|+++++|
T Consensus 176 ~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nG 250 (336)
T KOG2679|consen 176 TDDVYDWRGVLPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYING 250 (336)
T ss_pred cccccccccCChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEec
Confidence 0 1367899999999984 56799999999998754 456778999999999999999999999
Q ss_pred cccceeeeeecccCccC-CCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCC
Q 017367 229 HVHAYERSNRVFNYTLD-PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQ 307 (373)
Q Consensus 229 H~H~~~r~~p~~~~~~~-~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
|.|+.|... . .+++-|+++|+|...-.... + | ..-.
T Consensus 251 HDHcLQhis-------~~e~~iqf~tSGagSkaw~g~~-~------------------------~-----------~~~~ 287 (336)
T KOG2679|consen 251 HDHCLQHIS-------SPESGIQFVTSGAGSKAWRGTD-H------------------------N-----------PEVN 287 (336)
T ss_pred chhhhhhcc-------CCCCCeeEEeeCCcccccCCCc-c------------------------C-----------CccC
Confidence 999999874 3 35666777777654321100 0 0 0112
Q ss_pred CCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEE
Q 017367 308 PDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIY 350 (373)
Q Consensus 308 ~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~ 350 (373)
|+.-.|.-..-||.-+++ ....+++.|+... ++++..-.
T Consensus 288 p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD~~---G~~Lhk~~ 326 (336)
T KOG2679|consen 288 PKELKFYYDGQGFMSVEI-SHSEARVVFYDVS---GKVLHKWS 326 (336)
T ss_pred hhheEEeeCCCceEEEEE-ecceeEEEEEecc---CceEEEee
Confidence 333455444459999999 7788999998643 37887744
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=211.26 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=137.0
Q ss_pred eEEEEEecCCCCCC--------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~~--------------~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
|||+++||+|.... ..++++.+++.+||+||++||+++. +.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999996542 1345677777789999999999952 210 012
Q ss_pred HHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc----
Q 017367 86 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS---- 161 (373)
Q Consensus 86 ~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~---- 161 (373)
..|+.+.+.++.+ ++|+++++||||...... .+.. .... ...+..||+|+.++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666666 799999999999863221 1110 0000 1245579999999999999998521
Q ss_pred ------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHH
Q 017367 162 ------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 211 (373)
Q Consensus 162 ------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~ 211 (373)
.....+|++||+++|+++..... .+||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~-~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGE-KVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCC-eEEEEEeccCCCCCCCc-cccccCHH
Confidence 12468999999999998753333 48999999987654211 11112257
Q ss_pred HHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 212 EMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 212 ~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
.+.++++++ +|+++|+||+|.++.. ..+|+.|+++|+-..
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~--------~~~gi~~~~~~a~~~ 246 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYA--------QRHGIHFLTLEGMVE 246 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCcc--------ccCCeeEEEechhhc
Confidence 788999996 8999999999998754 357898988886443
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=204.57 Aligned_cols=192 Identities=22% Similarity=0.320 Sum_probs=136.0
Q ss_pred EEEEEecCCCCCC-------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 21 RIAIVGDLGLTYN-------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 21 r~~~igD~h~~~~-------------~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
||+++||+|.+.. ..++++.+++. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 6999999998743 13456666665 89999999999952 22 2
Q ss_pred HHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC---
Q 017367 86 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--- 162 (373)
Q Consensus 86 ~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~--- 162 (373)
.+++.+.+.++.+ ++|+++|+||||... . +.+.|..... ..+..+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~-----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA-----A---MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH-----H---HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3456666777766 899999999999741 1 2222211100 1345678999999999999986532
Q ss_pred -CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeeeeec
Q 017367 163 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 163 -~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~ 239 (373)
....+|++||++.|++.. .. .+|+++|+|++......... ....++++.+++.++ +++++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~--~~-~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP--DK-PTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC--CC-CEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 246899999999999875 22 36778888876543211111 112367899999999 99999999999976553
Q ss_pred ccCccCCCCCEEEEeCCCCCc
Q 017367 240 FNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 240 ~~~~~~~~g~~yi~~G~gG~~ 260 (373)
.+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 478999999987774
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=200.22 Aligned_cols=192 Identities=19% Similarity=0.250 Sum_probs=126.1
Q ss_pred CCeEEEEEecCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 18 YPKRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 18 ~~~r~~~igD~h~~~---------~----~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
.++||++++|+|+.. + ..++++.+++. +||+||++||++. ++.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~---------------- 70 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS---------------- 70 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC----------------
Confidence 369999999999632 1 13456666553 6999999999994 222
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY 162 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~ 162 (373)
...++.+.+.++.+ ++|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 --~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g 133 (275)
T PRK11148 71 --SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFG 133 (275)
T ss_pred --HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCC
Confidence 13455666667766 789999999999842 11222111111 11233444567999999996432
Q ss_pred ----CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeee
Q 017367 163 ----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERS 236 (373)
Q Consensus 163 ----~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~ 236 (373)
..+.+|++||+++|+++.. .+.+|+++|+|+.... .+... .....++|.++++++ +|+++|+||+|.....
T Consensus 134 ~~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~ 210 (275)
T PRK11148 134 VPHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL 210 (275)
T ss_pred CcCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc
Confidence 3468999999999998753 3335666666764422 11110 112356899999998 8999999999985443
Q ss_pred eecccCccCCCCCEEEEeCCCCC
Q 017367 237 NRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
..+|+.++++++.+.
T Consensus 211 --------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 --------DWNGRRLLATPSTCV 225 (275)
T ss_pred --------eECCEEEEEcCCCcC
Confidence 246888877766554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=191.51 Aligned_cols=193 Identities=21% Similarity=0.272 Sum_probs=126.3
Q ss_pred EEEEecCCCCCCh--------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 22 IAIVGDLGLTYNT--------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 22 ~~~igD~h~~~~~--------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
|++++|+|.+... ..+++.+++.+||+||++||++.... ..+. ....++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999986431 12355666789999999999994211 1111 01223557877777
Q ss_pred HHhhhhc--CCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEE--EeCCEEEEEEccccc--------
Q 017367 94 FMQNLVS--KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSF--NAGGIHFIMLGAYIS-------- 161 (373)
Q Consensus 94 ~l~~l~~--~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~--~~g~~~fi~ldt~~~-------- 161 (373)
.+..+.. ..|++.++||||............|..++.... .....+|.+ ..++++||+|||...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATG----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheec----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 7766532 589999999999964332222222222221100 011223333 348999999999742
Q ss_pred --CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeec
Q 017367 162 --YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 162 --~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~ 239 (373)
.....+|++||++.|+++.. .+++||++|+|+....... . . ....+.++|++++|+++||||+|.+++..|+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~~--~~~~IV~~HhP~~~~~~~~-~--~-~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKSTN--SNYTIWFGHYPTSTIISPS-A--K-SSSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred eeccCCHHHHHHHHHHHHhccc--CCeEEEEEcccchhccCCC-c--c-hhHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 23468999999999998653 3468999999986532211 1 1 1223899999999999999999999996664
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=176.77 Aligned_cols=183 Identities=20% Similarity=0.286 Sum_probs=120.6
Q ss_pred HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH-HHHHHHHHHhhhhcCCCeEEecCCC
Q 017367 35 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP-RWDYWGRFMQNLVSKVPIMVVEGNH 111 (373)
Q Consensus 35 ~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~-~~~~~~~~l~~l~~~~P~~~v~GNH 111 (373)
+++++.+.+. +|||||++||++..+.+.. ..+.... .+..+.+.++.....+|+++++|||
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------chhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4567777766 9999999999996532210 0000000 2444566666666789999999999
Q ss_pred CcCCCCC-------CcchhhhhcccC--CCCCC-CCCCCcceEEEE-eCCEEEEEEcccccC-----------CCChHHH
Q 017367 112 EIEAQAG-------NQTFVAYSSRFA--FPSEE-SGSLSSFYYSFN-AGGIHFIMLGAYISY-----------DKSGHQY 169 (373)
Q Consensus 112 D~~~~~~-------~~~~~~~~~~~~--~p~~~-~~~~~~~~ys~~-~g~~~fi~ldt~~~~-----------~~~~~Q~ 169 (373)
|...... ...+..+...|. ++... .......||++. .+++++|+|||.... ....+|+
T Consensus 120 D~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql 199 (296)
T cd00842 120 DSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQL 199 (296)
T ss_pred CCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHH
Confidence 9875321 112222222222 22111 112346789988 889999999996432 1247899
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcC--ccEEEeccccceeeee
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERSN 237 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~~~r~~ 237 (373)
+||+++|+++++.+.+ ++|++|+|+....... .....++|.+++++|. |.++|+||+|..+...
T Consensus 200 ~WL~~~L~~a~~~~~~-v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 200 QWLEDELQEAEQAGEK-VWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred HHHHHHHHHHHHCCCe-EEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 9999999998644433 7778899987643221 1345688999999996 7889999999877653
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-21 Score=169.19 Aligned_cols=149 Identities=19% Similarity=0.267 Sum_probs=106.7
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 017367 20 KRIAIVGDLGLTYNT---------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 90 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~ 90 (373)
|||++++|+|..... ..+++.+.+.+||+||++||++.. +. ...+|..
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GD-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CC-----------------CHHHHHH
Confidence 689999999975431 123444455789999999999952 11 0246778
Q ss_pred HHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHH
Q 017367 91 WGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169 (373)
Q Consensus 91 ~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~ 169 (373)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888885 67999999999992 122222 2358999
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-----hHHHHHHHHHHHHHc-CccEEEeccccceeeee
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-----AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 237 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~ 237 (373)
+||++.|++.+. . ++|+++|+|++......... ....++.|.++++++ +|+++|+||.|.+.+..
T Consensus 95 ~WL~~~L~~~~~--~-~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 95 QWANEVLKKHPD--R-PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HHHHHHHHHCCC--C-CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 999999998642 2 37888899987654321111 123346788999999 79999999999987764
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=155.17 Aligned_cols=191 Identities=17% Similarity=0.204 Sum_probs=117.6
Q ss_pred EEEEecCCCCC--------C---hHHHHHHHHhC------CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 22 IAIVGDLGLTY--------N---TTCTINHMSSN------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 22 ~~~igD~h~~~--------~---~~~~l~~l~~~------~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
|.+++|+|... - ..+.++++.+. +||+||++||++.. +. .
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~-----------------~ 57 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK-----------------L 57 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC-----------------h
Confidence 46899999772 1 13455555543 99999999999842 11 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc---
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS--- 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~--- 161 (373)
.......+.++.+ ..|+++|+||||++.. ....+.+.+... +..-....++.++++.|++++....
T Consensus 58 -~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~~~----~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 58 -EEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALEES----RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred -HHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHHhc----CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 1122233344444 4589999999998421 112222211100 0000012456678899999863211
Q ss_pred -C-------------CCChHHHHHHHHHHhhccCCC-CCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEE
Q 017367 162 -Y-------------DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 162 -~-------------~~~~~Q~~WL~~~L~~~~~~~-~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl 226 (373)
. ....+|++||++.|+++.... ..++|+++|+|++..... .+.+.+++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 0 013568999999999875322 235888889888664321 24577888999999999
Q ss_pred eccccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 227 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 227 ~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
+||+|..++..|+.. ..+|+.|.++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999988766532 3467878776654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.6e-18 Score=153.10 Aligned_cols=171 Identities=19% Similarity=0.253 Sum_probs=107.7
Q ss_pred HHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCC
Q 017367 37 TINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEA 115 (373)
Q Consensus 37 ~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~ 115 (373)
....+.+ .+||+||++||++.. |... ..+.+..+++.|.+++..+...+|++.|+||||+..
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~d~------G~~~-----------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~ 98 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLFDG------GRDW-----------ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGF 98 (257)
T ss_pred HHHHHHHhcCCCEEEEecccccC------CeeC-----------cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCC
Confidence 3444443 589999999999942 3210 011222233444555544433589999999999854
Q ss_pred CCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC-----CCChHHHHHHHHHHhhccCCCCCeEE
Q 017367 116 QAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-----DKSGHQYKWLEKDLANVDRSVTPWLV 188 (373)
Q Consensus 116 ~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~iI 188 (373)
.... .....|.+.|. ..+++++.++++||+||+.... ....+|++||++.|+..... .| +|
T Consensus 99 ~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-~p-~I 166 (257)
T cd08163 99 GNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS-KP-RI 166 (257)
T ss_pred CCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC-Cc-EE
Confidence 3211 12344555552 2468999999999999996321 24568999999999876432 33 78
Q ss_pred EEeCCCCcCCCCCCcc---c---------hH----HH-HHHHHHHHHHcCccEEEeccccceeee
Q 017367 189 ATWHPPWYSSYSSHYR---E---------AE----CM-RVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 189 v~~H~P~~~~~~~~~~---~---------~~----~~-~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
+++|+|+|.......+ + .. .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 167 Ll~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 167 LLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred EEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 9999998854321110 0 00 01 234456777779999999999987554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.9e-18 Score=146.33 Aligned_cols=167 Identities=18% Similarity=0.196 Sum_probs=102.8
Q ss_pred EEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcC
Q 017367 22 IAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSK 101 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~ 101 (373)
|+++||+|........ ..+.+.++|+||++||++.. +. ......+ +.++.+ +
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~------------------~~~~~~~-~~l~~~--~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GG------------------KEAAVEI-NLLLAI--G 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CC------------------HHHHHHH-HHHHhc--C
Confidence 5799999986543322 44556789999999999942 22 1111222 444444 7
Q ss_pred CCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc------CCCChHHHHHHHHH
Q 017367 102 VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS------YDKSGHQYKWLEKD 175 (373)
Q Consensus 102 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~------~~~~~~Q~~WL~~~ 175 (373)
+|+++++||||.... ......... .. ....+.+++++|+++++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~~-------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAGL-------NL--HGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCcE-------ec--CCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997321 111100000 00 11345688999999987432 23467899998 44
Q ss_pred HhhccCCCCCeEEEEeCCCCcCC-CCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 176 LANVDRSVTPWLVATWHPPWYSS-YSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 176 L~~~~~~~~~~iIv~~H~P~~~~-~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
|.... .+..|+++|+|++.. ............+.+.+++++++++++||||+|...
T Consensus 118 l~~~~---~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 118 LNNLL---AKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhccC---CCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 44332 234788888888653 111111111224678899999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=154.72 Aligned_cols=176 Identities=18% Similarity=0.211 Sum_probs=106.3
Q ss_pred EEEEEecCCCCCCh-------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 21 RIAIVGDLGLTYNT-------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 21 r~~~igD~h~~~~~-------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
||+++||+|..... .++++.+.+.++|+||++||++.. . + +...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~-------------------~-~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F-------------------Q-RSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h-------------------h-hHHHHHH
Confidence 68999999965321 235566667899999999999931 0 0 1112233
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC-----------
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY----------- 162 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~----------- 162 (373)
.+.++ ...|+++++||||+..... +..+.+.+. .....+.++.+..++++|++++...++
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~~---~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDLT---YEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCCC---HHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33322 4689999999999852211 121221110 001222333444578899988843221
Q ss_pred ---------------C-----CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCC------CCccchH--HHHHHHH
Q 017367 163 ---------------D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS------SHYREAE--CMRVEME 214 (373)
Q Consensus 163 ---------------~-----~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~------~~~~~~~--~~~~~l~ 214 (373)
. ...+|++||++.|+++.. .+ +|+++|+|+..... ..+.... ...+.|.
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 0 136789999999988753 23 66777777643211 1111111 1147899
Q ss_pred HHHHHcCccEEEecccccee
Q 017367 215 ALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 215 ~ll~~~~v~lvl~GH~H~~~ 234 (373)
+++++++++++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999854
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-19 Score=150.04 Aligned_cols=188 Identities=23% Similarity=0.271 Sum_probs=97.3
Q ss_pred eEEEEEecCCCCCChH-----HHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH-H
Q 017367 20 KRIAIVGDLGLTYNTT-----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG-R 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~-----~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~-~ 93 (373)
+||+++||+|...... .......+.++|+||++||+++.. . ....+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~-----------------~~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------N-----------------PSEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------S-----------------HHHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------c-----------------ccccchhhhcc
Confidence 6999999999875433 233444567999999999999642 1 011111111 1
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCC---hHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKS---GHQY 169 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~---~~Q~ 169 (373)
........+|+++++||||.................. ..........+........................ ..++
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 2233356899999999999863211110011110000 00000000000001111122222222221111112 2233
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccce
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
.|+...+.. ...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333332 34467999999999876543211 01234678889999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-18 Score=148.58 Aligned_cols=150 Identities=20% Similarity=0.213 Sum_probs=95.2
Q ss_pred CeEEEEEecCCCCCCh------------HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 19 PKRIAIVGDLGLTYNT------------TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~------------~~~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
.+||++++|+|.+... .+.+.+ +.+.+||+||++||+++.... . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------c--h
Confidence 4899999999986432 122333 335689999999999963210 0 0
Q ss_pred HHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCC
Q 017367 86 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 164 (373)
Q Consensus 86 ~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~ 164 (373)
..+..+.++++.+. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 12334455555552 37999999999991 1124
Q ss_pred ChHHHHHHHHHHhhcc--CCCCCeEEEEeCCCCcCCCCCCc---------cc---hHHHHHHHHHH-HHHcCccEEEecc
Q 017367 165 SGHQYKWLEKDLANVD--RSVTPWLVATWHPPWYSSYSSHY---------RE---AECMRVEMEAL-LYSYGVDIVFNGH 229 (373)
Q Consensus 165 ~~~Q~~WL~~~L~~~~--~~~~~~iIv~~H~P~~~~~~~~~---------~~---~~~~~~~l~~l-l~~~~v~lvl~GH 229 (373)
..+|++||+++|++.. +....+.++++|+|+......+. .+ .......+.++ ++..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999873 12234578888888754321110 01 01122334444 4556899999999
Q ss_pred ccceeeee
Q 017367 230 VHAYERSN 237 (373)
Q Consensus 230 ~H~~~r~~ 237 (373)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99976653
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=159.42 Aligned_cols=114 Identities=22% Similarity=0.263 Sum_probs=78.7
Q ss_pred CcceEEEE-eCCEEEEEEccccc-----CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc-----chHH
Q 017367 140 SSFYYSFN-AGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-----EAEC 208 (373)
Q Consensus 140 ~~~~ys~~-~g~~~fi~ldt~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~-----~~~~ 208 (373)
+..||+|+ .++++||+|||... .....+|++||+++|++.. .+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a~---~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRASS---DTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcCC---CCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 89999999999743 2357999999999999753 235888999998765432211 1112
Q ss_pred HHHHHHHHHHHc-CccEEEeccccceeeeeecc-cCccCCCCCEEEEeCC
Q 017367 209 MRVEMEALLYSY-GVDIVFNGHVHAYERSNRVF-NYTLDPCGPVHITIGD 256 (373)
Q Consensus 209 ~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~-~~~~~~~g~~yi~~G~ 256 (373)
..++|.++|+++ +|.++||||+|......-.. +......|.+.|.+++
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 357899999999 89999999999866442100 0000123566676654
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-16 Score=153.64 Aligned_cols=231 Identities=23% Similarity=0.332 Sum_probs=113.9
Q ss_pred CCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHh-CCCCEEEEcCcccccccc--ccCCCCCCccc--cCCC
Q 017367 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSS-NEPDLVLLVGDVTYANLY--LTNGTGSDCYS--CSFS 76 (373)
Q Consensus 2 s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~-~~pd~vi~~GDl~y~~~~--~~~g~~~~~~~--~~~~ 76 (373)
|.+.+|+|+|..... ++||++.|+.+.......+++.+.+ .+|||+|++||.+|.+.. ........... ....
T Consensus 90 s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~ 167 (453)
T PF09423_consen 90 SPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAH 167 (453)
T ss_dssp ---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSS
T ss_pred CCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccccccccc
Confidence 567899999665433 5999999999876556778888888 699999999999998741 00000000000 0000
Q ss_pred CCCCcccchHHHHHHH--HHHhhhhcCCCeEEecCCCCcCCCCCCc------------------chhhhhcccCCCCCC-
Q 017367 77 KTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGNQ------------------TFVAYSSRFAFPSEE- 135 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~~------------------~~~~~~~~~~~p~~~- 135 (373)
.....+.|+..|..+. ..++.+.+.+|+++++-.||+..+.... .+..|..........
T Consensus 168 ~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~ 247 (453)
T PF09423_consen 168 EAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDP 247 (453)
T ss_dssp S--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-
T ss_pred ccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCc
Confidence 1122334554454432 3456667789999999999997653210 011222211111100
Q ss_pred CCCCCcceEEEEeCC-EEEEEEcccccCC---------------------CChHHHHHHHHHHhhccCCCCCeEEEEeCC
Q 017367 136 SGSLSSFYYSFNAGG-IHFIMLGAYISYD---------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHP 193 (373)
Q Consensus 136 ~~~~~~~~ys~~~g~-~~fi~ldt~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~ 193 (373)
.......|++|.+|+ +.|++||+..... .+.+|++||++.|++.. .+|+|+..-.
T Consensus 248 ~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~---a~~kvi~s~v 324 (453)
T PF09423_consen 248 PGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQ---ATWKVIGSSV 324 (453)
T ss_dssp BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS
T ss_pred cCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCC---CcEEEEEeCC
Confidence 112345789999999 9999999863211 36899999999999853 6799998877
Q ss_pred CCcCCCC-----------CCccchHHHHHHHHHHHHHcCcc--EEEeccccceeeee
Q 017367 194 PWYSSYS-----------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYERSN 237 (373)
Q Consensus 194 P~~~~~~-----------~~~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~~~r~~ 237 (373)
|+..... ..+......|++|.++|++.++. ++|+|..|......
T Consensus 325 ~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 325 PFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp --S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred ceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 7643221 12233445688999999888664 88999999877664
|
|
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=149.09 Aligned_cols=179 Identities=26% Similarity=0.363 Sum_probs=120.2
Q ss_pred eEEEEEecCCCCC-C--h----HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 20 KRIAIVGDLGLTY-N--T----TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 20 ~r~~~igD~h~~~-~--~----~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
+||++|||+|... . . .++++.++..+||+||++||++.. |. ...++.+.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 5899999999872 2 1 345677777899999999999952 33 23455666
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEe-CCEEEEEEccccc----CCCChH
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNA-GGIHFIMLGAYIS----YDKSGH 167 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~-g~~~fi~ldt~~~----~~~~~~ 167 (373)
++++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+... ......
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 7777555588999999999986432 222222221110 01111122 6789999999754 235799
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcC--ccEEEeccccce
Q 017367 168 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 233 (373)
Q Consensus 168 Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~~ 233 (373)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999987643112468888888766443332223333466777888887 999999999975
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=6e-16 Score=129.15 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=90.9
Q ss_pred EEEEecCCCCCChH-----------HHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 017367 22 IAIVGDLGLTYNTT-----------CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 90 (373)
Q Consensus 22 ~~~igD~h~~~~~~-----------~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~ 90 (373)
|+++||+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999865321 13445556799999999999953 22 245666
Q ss_pred HHHHHhhhhcC-CCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHH
Q 017367 91 WGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169 (373)
Q Consensus 91 ~~~~l~~l~~~-~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~ 169 (373)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77778877433 699999999995
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCC
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
|+++|+|++.......... ...+.+.+++++++++++|+||+|......-. ...+++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCE
Confidence 6777877766533221111 14567899999999999999999986654211 124456
Q ss_pred EEEEeCC
Q 017367 250 VHITIGD 256 (373)
Q Consensus 250 ~yi~~G~ 256 (373)
.++.+|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 6776664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=131.98 Aligned_cols=174 Identities=13% Similarity=0.148 Sum_probs=103.5
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 18 YPKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
++.||+++||+|..... .++++.+.+.++|+||++||+++. +.. ...+..+.+.+.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~~-----------------~~~~~~~l~~l~ 59 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AAK-----------------SEDYAAFFRILG 59 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHH
Confidence 36899999999965433 334454555789999999999952 210 112223333343
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhcccC----CCCCCCCCCCcceEEEEe-CCEEEEEEcccccC--CCChHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY--DKSGHQY 169 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~-g~~~fi~ldt~~~~--~~~~~Q~ 169 (373)
.+ ..|+++|+||||.. ........|. .|... ..... ...+ |+++|++++..... ..+++|.
T Consensus 60 ~l--~~pv~~V~GNhD~~------v~~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 60 EA--HLPTFYVPGPQDAP------LWEYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred hc--CCceEEEcCCCChH------HHHHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 33 68999999999962 0111111121 12110 01111 2344 55999999976433 3355552
Q ss_pred ----HHHHH-HHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccc
Q 017367 170 ----KWLEK-DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231 (373)
Q Consensus 170 ----~WL~~-~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 231 (373)
+||.+ .|+...+...+..|+++|+|++.....+. -.+.+.++++++++.+++|||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 56533 22222111223578899999988742221 23678889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-15 Score=134.57 Aligned_cols=187 Identities=20% Similarity=0.207 Sum_probs=111.9
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
++||+++||+|.... ..+.++.+.+.+||+|+++||+++.. . ... +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~------------------~~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------V------------------DVL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------c------------------hhh-HHHHH
Confidence 489999999998743 24566667778999999999999531 1 000 24556
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 173 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~ 173 (373)
.++.+....|+++++||||....... .+....+...+. ...+....++.++..+..+.-.. .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 66666667899999999998643211 101111111111 12233455666665444443111 112234566
Q ss_pred HHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc----------
Q 017367 174 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT---------- 243 (373)
Q Consensus 174 ~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~---------- 243 (373)
+.++..+. ..+.|++.|.|.+.. .+.+.++|++|+||+|..|...|.....
T Consensus 126 ~~~~~~~~--~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLDE--DDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCCC--CCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 66665442 345899999876321 1145689999999999999877654321
Q ss_pred ----cCCCCCEEEEeCCCCC
Q 017367 244 ----LDPCGPVHITIGDGGN 259 (373)
Q Consensus 244 ----~~~~g~~yi~~G~gG~ 259 (373)
...+..+||.+|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 1233466777766654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=140.44 Aligned_cols=93 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred CcceEEEE-eCCE--EEEEEccccc-----------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc--
Q 017367 140 SSFYYSFN-AGGI--HFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-- 203 (373)
Q Consensus 140 ~~~~ys~~-~g~~--~fi~ldt~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~-- 203 (373)
+..||+|+ .+++ ++|+||+... .....+|++||+++|+.+.+ +.+++|+++|+|+.+......
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998641 12469999999999998864 446789999999875221110
Q ss_pred -c----------chHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 204 -R----------EAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 204 -~----------~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
. .......+|.++|.+| +|.++||||.|..
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0 0011124799999999 7999999999973
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=7e-16 Score=131.96 Aligned_cols=145 Identities=20% Similarity=0.297 Sum_probs=86.1
Q ss_pred EEEEecCCCCCChHHH-H-HHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 22 IAIVGDLGLTYNTTCT-I-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~-l-~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
|+++||+|.+...... + +.+.+.++|+|+++||+++. +. ...+ ........
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~---~~~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRF---APLLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHH---HHHHHhhc
Confidence 5789999987644322 2 33445689999999999952 11 0111 11223334
Q ss_pred cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC-CChHHHHHHHHHHhh
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD-KSGHQYKWLEKDLAN 178 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~-~~~~Q~~WL~~~L~~ 178 (373)
...|+++++||||.. ++|+......++. ...++++|+.+++.
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 578999999999984 2222222111111 12344455544443
Q ss_pred ccCCCCCeEEEEeCCCCcCCCCCCcc----chHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 179 VDRSVTPWLVATWHPPWYSSYSSHYR----EAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 179 ~~~~~~~~iIv~~H~P~~~~~~~~~~----~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
. .+||++|+|+......... .....++.+.+++++++|++++|||+|.....
T Consensus 97 -----~-~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 -----G-KTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred -----C-CEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 1 2677778877664322211 11234566778888899999999999986443
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.1e-14 Score=128.50 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=143.8
Q ss_pred CCeEEEEEecCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCC
Q 017367 18 YPKRIAIVGDLGLTYN--------------------TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~--------------------~~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
.+|||+.++|+|.+.. ....|.++. .++||||+++||++++...
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t--------------- 116 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST--------------- 116 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc---------------
Confidence 3799999999997643 123455554 5799999999999964211
Q ss_pred CCCCcccchHHHHHHHHHHhhh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCC---CCCc-------ceEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG---SLSS-------FYYS 145 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~-------~~ys 145 (373)
..++ ..+++.+++. ..++||.+++||||-...........+... +|...+. ..+. ..|-
T Consensus 117 -----~Da~---~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn 186 (379)
T KOG1432|consen 117 -----QDAA---TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYN 186 (379)
T ss_pred -----HhHH---HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceE
Confidence 0111 2355666665 679999999999998765433333333221 1211100 0011 1111
Q ss_pred EEeC-----------CEEEEEEcccccC----------CCChHHHHHHHHHHhhc---cCCCCC-eEEEEeCCCCcC--C
Q 017367 146 FNAG-----------GIHFIMLGAYISY----------DKSGHQYKWLEKDLANV---DRSVTP-WLVATWHPPWYS--S 198 (373)
Q Consensus 146 ~~~g-----------~~~fi~ldt~~~~----------~~~~~Q~~WL~~~L~~~---~~~~~~-~iIv~~H~P~~~--~ 198 (373)
.... -..+++||+..+- .....|++||+..-..- ...-.| .-+++.|.|+-. .
T Consensus 187 ~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~ 266 (379)
T KOG1432|consen 187 LQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLE 266 (379)
T ss_pred EEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhh
Confidence 1111 1345566654221 23588999999877331 111223 467888998632 1
Q ss_pred CCC------Cccc---hHHHHHHHHHHHH-HcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccC
Q 017367 199 YSS------HYRE---AECMRVEMEALLY-SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHA 268 (373)
Q Consensus 199 ~~~------~~~~---~~~~~~~l~~ll~-~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~ 268 (373)
... ...+ .......+...|. ..+|++|++||.|......+ -.+.+++.=|+|+..-++.
T Consensus 267 ~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~-------~k~~~wlCygGgaGyggYg---- 335 (379)
T KOG1432|consen 267 LESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE-------LKGELWLCYGGGAGYGGYG---- 335 (379)
T ss_pred ccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecc-------cCCeEEEEecCCCccCCcC----
Confidence 111 0111 1112344555665 77999999999999776654 3454777666554432110
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeEEEEEe-cCCeEEEEEEEecCCCceeeE
Q 017367 269 DEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVK-NETWALWTWHRNQDSNNKVGD 347 (373)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~-~~t~l~~~~~~~~~~~~~v~d 347 (373)
.+.|- .+=-++++. +...+ -+|+|.+|+..+|+|
T Consensus 336 --------------------------------------~~gw~------Rr~Rv~e~d~~~~~I-kTWKRl~d~~~~~~D 370 (379)
T KOG1432|consen 336 --------------------------------------IGGWE------RRARVFELDLNKDRI-KTWKRLDDKPLSVID 370 (379)
T ss_pred --------------------------------------cCCcc------cceEEEEcccccccc-ceeeecCCCCcceee
Confidence 01111 123345553 44444 469999998888989
Q ss_pred EEEEEeC
Q 017367 348 QIYIVRQ 354 (373)
Q Consensus 348 ~~~i~k~ 354 (373)
.-.+.+.
T Consensus 371 ~q~l~d~ 377 (379)
T KOG1432|consen 371 YQLLYDG 377 (379)
T ss_pred eEEEecc
Confidence 8777654
|
|
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.1e-15 Score=135.24 Aligned_cols=164 Identities=15% Similarity=0.131 Sum_probs=97.8
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
++||+++||+|.+.. ..++++.+++.+||+|+++||+++. +. ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~------~~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLF------DM------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCC------Cc------------------cccHHHHHH
Confidence 699999999998632 2345666777899999999999942 11 012344666
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCCCCCcceEEEEeCC--EEEEEEcccccCCCChHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNAGG--IHFIMLGAYISYDKSGHQYK 170 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~--~~fi~ldt~~~~~~~~~Q~~ 170 (373)
.++.+.+..|+++|+||||+...... +.+....+.-.. ....+....+..++ +.+++++........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 77777666899999999998532111 111112111111 01223344455543 566677542211101
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeec
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~ 239 (373)
..+.+++ . ...|++.|.|-.. +.+.+.++|++||||+|.-|...|.
T Consensus 175 -~~~~~~~----~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----N-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----C-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1111211 2 2478999999632 1234568999999999999987664
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.5e-15 Score=131.11 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=102.4
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 21 RIAIVGDLGLTYNT----------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 21 r~~~igD~h~~~~~----------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
||+++||+|++... .++++.+.+.++|+||++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999987421 23444555679999999999995310 00
Q ss_pred hHHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCC--CCCCCCcceEEEEeCCEEEEEEccccc
Q 017367 85 QPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE--ESGSLSSFYYSFNAGGIHFIMLGAYIS 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~ys~~~g~~~fi~ldt~~~ 161 (373)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........+...++.|++++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 123455666666663 48999999999998643211 1111100000000 000011112223344577777765422
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 162 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 162 ~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
. ....+++++++.+.... .....|++.|.|+.......... .......+...+++++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12334444455554443 23458999999876543221110 122334456678999999999987653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-15 Score=105.56 Aligned_cols=43 Identities=40% Similarity=0.686 Sum_probs=32.1
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEE
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 349 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~ 349 (373)
.++|+|+++|..+|||++|+|.|+|+|+|+|++++|+ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 4678999999999999999999999999999998877 899997
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.5e-13 Score=119.40 Aligned_cols=195 Identities=21% Similarity=0.239 Sum_probs=103.8
Q ss_pred eEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 20 KRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
+||+++||+|..... ..++.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976543 33456667799999999999831 0 1233334444
Q ss_pred cCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCCCCCcceEE---EEeCCEEEEEEccccc--------------
Q 017367 100 SKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYS---FNAGGIHFIMLGAYIS-------------- 161 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ys---~~~g~~~fi~ldt~~~-------------- 161 (373)
..|+++++||||....... ..+..+.+.... .+..+.. .++....+.++.+...
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~-------lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLEL-------LGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHH-------hCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 5799999999998653211 012223222211 1111111 2233333333333211
Q ss_pred --CC--CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCC-------------CccchHHHHHHHHHHHHHcCccE
Q 017367 162 --YD--KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS-------------HYREAECMRVEMEALLYSYGVDI 224 (373)
Q Consensus 162 --~~--~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~-------------~~~~~~~~~~~l~~ll~~~~v~l 224 (373)
+. .-.+-++.+-+.++.+.... + .|++.|.++...++. .......+.+++..+-.+-.+.+
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~~~-~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPPDL-P-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCCCC-C-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 00 11233444444444333222 2 688889887654311 11123345566655543346899
Q ss_pred EEeccccceeeeee-ccc-CccCCCCCEEEEeC
Q 017367 225 VFNGHVHAYERSNR-VFN-YTLDPCGPVHITIG 255 (373)
Q Consensus 225 vl~GH~H~~~r~~p-~~~-~~~~~~g~~yi~~G 255 (373)
+++||+|.--+... +++ ...+.+|++|+..+
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 99999997533321 000 11356789998654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.3e-13 Score=108.95 Aligned_cols=116 Identities=19% Similarity=0.229 Sum_probs=75.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc
Q 017367 21 RIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 100 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~ 100 (373)
||+++||+|.... .+...++|+|+++||++.. +. ..+++.+.+.++.+
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~-- 48 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSL-- 48 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhC--
Confidence 5899999997654 2344689999999999942 21 12334455555555
Q ss_pred CCC-eEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhhc
Q 017367 101 KVP-IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179 (373)
Q Consensus 101 ~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~~ 179 (373)
..| +++|+||||.... .
T Consensus 49 ~~~~~~~v~GNHD~~~~--------------------------------------------------------------~ 66 (135)
T cd07379 49 PHPHKIVIAGNHDLTLD--------------------------------------------------------------P 66 (135)
T ss_pred CCCeEEEEECCCCCcCC--------------------------------------------------------------C
Confidence 334 5789999996310 1
Q ss_pred cCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 180 ~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.+ ..|++.|.|++..............+.+.+++++.+++++|+||+|...
T Consensus 67 --~~--~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 --ED--TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CC--CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 12 2577788888764322111111223567778888899999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.6e-13 Score=126.58 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=144.2
Q ss_pred CCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCcccc------CC
Q 017367 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC------SF 75 (373)
Q Consensus 2 s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~------~~ 75 (373)
|.+-+|+|+|..+....-++|++.|..|.+.+.-.+.+.+.+.+||||||+||.+|.++-. ...++. ..
T Consensus 125 spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~-----~~~~~~~~~~~~~~ 199 (522)
T COG3540 125 SPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPI-----PDEVSLNSWKNVVV 199 (522)
T ss_pred ccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCc-----cccccccccccccc
Confidence 4466789999987553334444444445555566778888889999999999999975421 111110 01
Q ss_pred CC-----CCCcccchHHHHHHH--HHHhhhhcCCCeEEecCCCCcCCCCCC-----------cc--------hhhhhccc
Q 017367 76 SK-----TPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN-----------QT--------FVAYSSRF 129 (373)
Q Consensus 76 ~~-----~~~~~~y~~~~~~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~-----------~~--------~~~~~~~~ 129 (373)
.. ...-+.|+.+|..++ .-++...+..||++.+-.||..++... +. ++.|.+
T Consensus 200 ~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE-- 277 (522)
T COG3540 200 TQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYE-- 277 (522)
T ss_pred CCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHH--
Confidence 11 122346666666543 446777788999999999999865211 11 122222
Q ss_pred CCCCCCCC--CCCcceEEEEeCC-EEEEEEcccccC------C----------------CChHHHHHHHHHHhhccCCCC
Q 017367 130 AFPSEESG--SLSSFYYSFNAGG-IHFIMLGAYISY------D----------------KSGHQYKWLEKDLANVDRSVT 184 (373)
Q Consensus 130 ~~p~~~~~--~~~~~~ys~~~g~-~~fi~ldt~~~~------~----------------~~~~Q~~WL~~~L~~~~~~~~ 184 (373)
.||-.... .....|-+|.+|+ +.|.+||+.... + .+.+|.+||+..|.+ +++
T Consensus 278 ~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---Ska 354 (522)
T COG3540 278 HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKA 354 (522)
T ss_pred hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cch
Confidence 24443221 1357889999998 678899986432 1 268999999999998 567
Q ss_pred CeEEEEeCCCCcC----CC---C------CCccchHHHHHHHHHHHHHcCcc--EEEeccccceee
Q 017367 185 PWLVATWHPPWYS----SY---S------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYER 235 (373)
Q Consensus 185 ~~iIv~~H~P~~~----~~---~------~~~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~~~r 235 (373)
.|.|+..-.|+-. .. . ..+.....-|++|+.++++.++. ++|+|.+|....
T Consensus 355 tWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 355 TWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred hhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHH
Confidence 7998888877521 11 0 01122234488999999998654 899999996443
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=110.14 Aligned_cols=138 Identities=25% Similarity=0.393 Sum_probs=80.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|..... .++++.+ .++|+|+++||++.. ..+.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 4556666 579999999999831 2234444443
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhh
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 178 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~ 178 (373)
|++++.||||.. .+....... + + +..
T Consensus 49 ----~~~~v~GNHD~~---------~~~~~~~~~----------~----------------------------~---~~~ 74 (156)
T PF12850_consen 49 ----PVYVVRGNHDNW---------AFPNENDEE----------Y----------------------------L---LDA 74 (156)
T ss_dssp ----EEEEE--CCHST---------HHHSEECTC----------S----------------------------S---HSE
T ss_pred ----CEEEEeCCcccc---------cchhhhhcc----------c----------------------------c---ccc
Confidence 899999999953 121111000 0 0 001
Q ss_pred ccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 017367 179 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 179 ~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG 258 (373)
....-....|++.|.+.+.... ..+.+.+++...+++++|+||+|..+... .+++.++..|+-+
T Consensus 75 ~~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 75 LRLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp EEEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred eeeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 0000112467777776654321 12345677778899999999999977763 4678888888755
Q ss_pred C
Q 017367 259 N 259 (373)
Q Consensus 259 ~ 259 (373)
.
T Consensus 139 ~ 139 (156)
T PF12850_consen 139 G 139 (156)
T ss_dssp S
T ss_pred C
Confidence 4
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.7e-12 Score=103.91 Aligned_cols=116 Identities=28% Similarity=0.483 Sum_probs=80.1
Q ss_pred EEEecCCCCCChHHHH---HHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 23 AIVGDLGLTYNTTCTI---NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 23 ~~igD~h~~~~~~~~l---~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
+++||+|......... ....+.++|+||++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4789999876544332 34456799999999999963 110 11122221223335
Q ss_pred cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhhc
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~~ 179 (373)
...|+++++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 6899999999999
Q ss_pred cCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 180 ~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|++.............+..+..++.+.+++++|+||+|.+++..
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88889998765433222222246778888999999999999999988864
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=114.38 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=57.4
Q ss_pred CCeEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 18 YPKRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
..+||+++||+|..... .+.+.++....||+|+++||++... . .+....+...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~-----~-------------------~~~~~~~~~~ 98 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD-----R-------------------PPGVAALALF 98 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC-----C-------------------CCCHHHHHHH
Confidence 46999999999976544 3455566677889999999999520 0 1234567788
Q ss_pred HhhhhcCCCeEEecCCCCcCCC
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
+++|.+..+++++.||||+...
T Consensus 99 L~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 99 LAKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred HHhhhccCCEEEEecccccccc
Confidence 8888888999999999999754
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.8e-10 Score=98.25 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=29.9
Q ss_pred HHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 212 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 212 ~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
.+..+.++.+++++++||+|...... .+|.+++..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 44555667789999999999765432 35788999998764
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.32 E-value=6e-11 Score=100.55 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+|++++||+|..... ...++.+... ++|.|+++||++. ....+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------------------------------~~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------------------------------PFVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------------------------------HHHHHHHHH
Confidence 589999999976543 3344445555 8999999999982 012233344
Q ss_pred hhcCCCeEEecCCCCc
Q 017367 98 LVSKVPIMVVEGNHEI 113 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~ 113 (373)
+ ..|++.|.||||.
T Consensus 50 ~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 50 L--AAKVIAVRGNNDG 63 (158)
T ss_pred h--CCceEEEccCCCc
Confidence 3 5689999999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.8e-11 Score=117.15 Aligned_cols=179 Identities=17% Similarity=0.266 Sum_probs=106.4
Q ss_pred HHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCc
Q 017367 36 CTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 113 (373)
Q Consensus 36 ~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 113 (373)
.+|+.|.+. ++|+|+++||++-.+.|. ...+.--.....+.+.|.+...++|+|+++||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 456666543 499999999999654220 11111111233344556666679999999999998
Q ss_pred CCCC-------CCc-----chhhhhc---ccCCCCCCCCCCCcceEEEE-eCCEEEEEEcccccC----------CCChH
Q 017367 114 EAQA-------GNQ-----TFVAYSS---RFAFPSEESGSLSSFYYSFN-AGGIHFIMLGAYISY----------DKSGH 167 (373)
Q Consensus 114 ~~~~-------~~~-----~~~~~~~---~~~~p~~~~~~~~~~~ys~~-~g~~~fi~ldt~~~~----------~~~~~ 167 (373)
.... ... .|..+.. .|.-+........+.+|... .+|.++|+||+..-+ .....
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 6421 001 1111211 22222222233455667644 589999999986432 12477
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc--CccEEEeccccceeee
Q 017367 168 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY--GVDIVFNGHVHAYERS 236 (373)
Q Consensus 168 Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~--~v~lvl~GH~H~~~r~ 236 (373)
|++|+..+|.+++..+. -|-+++|.|+-... .. ......+-.++.++ -+...|.||+|.-+..
T Consensus 343 ~lqWf~~~L~~ae~~Ge-kVhil~HIPpG~~~-c~----~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGE-KVHILGHIPPGDGV-CL----EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HhhHHHHHHHHHHhcCC-EEEEEEeeCCCCcc-hh----hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 89999999999865443 37788999985421 11 11123445566666 3567899999986643
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-11 Score=110.10 Aligned_cols=178 Identities=17% Similarity=0.231 Sum_probs=92.0
Q ss_pred eEEEEEecCCCCCChH----HHHHHHH--hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNTT----CTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~----~~l~~l~--~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
+|++++||+|.+.... ..++.+. +.++|+|+++||++.. + .|.. ........+.+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~---------------~~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDD---------------DPSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccC---------------cCCHHHHHHHH
Confidence 4899999999875432 2344442 3589999999999942 1 1110 00122234556
Q ss_pred HHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHH
Q 017367 94 FMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 172 (373)
Q Consensus 94 ~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL 172 (373)
.++.+. .++|+++++||||.... ..+.+...+.. . .....+++++.+++..-..... .....++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~-----l-~~~~~~~~~g~~i~l~HGd~~~-~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL-----L-PDPSVIDLYGQRVLLLHGDTLC-TDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE-----e-CCcEEEEECCEEEEEECCcccc-cCCHHHHHH
Confidence 666664 35899999999997421 11222211100 0 1134567788887777543221 122333333
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCC---------------C-CCccchHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSY---------------S-SHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~---------------~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
.+.+... +.+...|.+++... . ....-.....+.+.+++++++++++++||+|.-..
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 3333221 11111111111000 0 00000000124677888999999999999998544
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-11 Score=105.67 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.0
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|+..... ..+..++.+++++++|+||.|.+....
T Consensus 112 i~lsH~P~~~~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 112 IMLSHVPLLAEGG----------QALKHVVTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred eeeeccccccccc----------HHHHHHHHhcCceEEEEcCccceeeEE
Confidence 8899999865321 256788889999999999999977653
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=102.60 Aligned_cols=57 Identities=19% Similarity=0.114 Sum_probs=37.2
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCc
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~ 260 (373)
.|++.|.+....... . .. ..++++.+++++++||+|..... ..++++++..|+.|..
T Consensus 77 ~i~v~Hg~~~~~~~~----~----~~-~~~~~~~~~d~vi~GHtH~~~~~--------~~~~~~~inpGs~~~~ 133 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L----DR-LYLAKEGGADVVLYGHTHIPVIE--------KIGGVLLLNPGSLSLP 133 (155)
T ss_pred EEEEECCcccccccc----h----hh-hhhhhhcCCCEEEECcccCCccE--------EECCEEEEeCCCccCc
Confidence 567777765433211 0 11 44566778999999999986543 2357888888887653
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-10 Score=96.26 Aligned_cols=189 Identities=18% Similarity=0.215 Sum_probs=99.6
Q ss_pred eEEEEEecCCCCCChHHHH-----------HHHHh------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 20 KRIAIVGDLGLTYNTTCTI-----------NHMSS------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~~l-----------~~l~~------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
+++..++|+|...+..+.| ++|.+ ..-|.|++.|||..+-.. +.+.
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l-~ea~---------------- 63 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRL-EEAE---------------- 63 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheec-hhhh----------------
Confidence 4678899999654322111 12221 245899999999975211 1111
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc---
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY--- 159 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~--- 159 (373)
.=.+++..| .-.-+.+.||||++..... ...+. +|... .. ..-.|.++++.+++.-..
T Consensus 64 -------~Dl~~i~~L--PG~K~m~rGNHDYWw~s~s----kl~n~--lp~~l--~~--~n~~f~l~n~aI~G~RgW~s~ 124 (230)
T COG1768 64 -------EDLRFIGDL--PGTKYMIRGNHDYWWSSIS----KLNNA--LPPIL--FY--LNNGFELLNYAIVGVRGWDSP 124 (230)
T ss_pred -------hhhhhhhcC--CCcEEEEecCCccccchHH----HHHhh--cCchH--hh--hccceeEeeEEEEEeecccCC
Confidence 113444544 3345899999999854211 11111 11100 00 001244555555443222
Q ss_pred -ccCCCC--------hHHHHHHHHHH-hhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecc
Q 017367 160 -ISYDKS--------GHQYKWLEKDL-ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 160 -~~~~~~--------~~Q~~WL~~~L-~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
.++..- ..++..|+..+ ++.+ +...-+|||.|.|+.+..... ..+.+++++++|+.++.||
T Consensus 125 ~~~~e~~te~Deki~~RE~~RLrlsa~a~l~-k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGH 195 (230)
T COG1768 125 SFDSEPLTEQDEKIFLREIGRLRLSADAALP-KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGH 195 (230)
T ss_pred CCCcCccchhHHHHHHHHHHHHHHHHHHhcc-cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeee
Confidence 112111 12334444422 2333 333458999999998754322 3466788899999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
.|.-.|-.+-.. +-.|+.|..+.+
T Consensus 196 lHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 196 LHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred ccCCCCCCCCcc---cccCceEEEEec
Confidence 998766432211 234777766554
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.2e-10 Score=98.43 Aligned_cols=189 Identities=18% Similarity=0.272 Sum_probs=112.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH--H
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF--M 95 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~--l 95 (373)
.+|+++++|+|..... .+.+..+...++|+++++||++|.. .+.. ....+. +
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~---------------------~~~~~~~~~ 57 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPK---------------------EVAEELNKL 57 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCch---------------------HHHHhhhHH
Confidence 5899999999987543 4455555556999999999999432 1210 001111 3
Q ss_pred hhh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc------cCCCChHH
Q 017367 96 QNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI------SYDKSGHQ 168 (373)
Q Consensus 96 ~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~------~~~~~~~Q 168 (373)
+.+ ...+|+++++||-|-. ...... +..... ..+ -+.+++++.|+.+.... ....++++
T Consensus 58 e~l~~~~~~v~avpGNcD~~-----~v~~~l-~~~~~~------v~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~ 123 (226)
T COG2129 58 EALKELGIPVLAVPGNCDPP-----EVIDVL-KNAGVN------VHG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDE 123 (226)
T ss_pred HHHHhcCCeEEEEcCCCChH-----HHHHHH-Hhcccc------ccc--ceEEecCcEEEEecccCCCCCCCccccCHHH
Confidence 444 3589999999998853 111111 111111 011 45778888888865321 11223333
Q ss_pred -HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCC
Q 017367 169 -YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDP 246 (373)
Q Consensus 169 -~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~ 246 (373)
+.-|++.+.++.. +..|+..|.|++.+....... ...-.+.+.+++++.++.+.+|||.|...-.. .-
T Consensus 124 I~s~l~~~v~~~~~---~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d-------~i 193 (226)
T COG2129 124 IYSKLKSLVKKADN---PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGID-------KI 193 (226)
T ss_pred HHHHHHHHHhcccC---cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccccc-------cc
Confidence 3444444444431 223889999998765432111 12235788899999999999999999754432 12
Q ss_pred CCCEEEEeCC
Q 017367 247 CGPVHITIGD 256 (373)
Q Consensus 247 ~g~~yi~~G~ 256 (373)
+.++.|..|.
T Consensus 194 G~TivVNPG~ 203 (226)
T COG2129 194 GNTIVVNPGP 203 (226)
T ss_pred CCeEEECCCC
Confidence 3466666555
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=95.44 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=31.0
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
.|+++|+|++...... .......+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3566677765432211 111112467778888999999999999975543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.4e-10 Score=96.73 Aligned_cols=177 Identities=21% Similarity=0.340 Sum_probs=88.9
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH--------
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD-------- 89 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~-------- 89 (373)
+-|++++||.+..... .+.++.+...++|.|+++||+.-.. . -..+|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~------a-----------------~~~e~~~a~~~~r~ 61 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAE------A-----------------RSDEYERAQEEQRE 61 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TC------H-----------------HHHHHHHHHHTT--
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccc------h-----------------hhhHHHHHhhhccC
Confidence 4689999999865443 3455555567999999999998321 0 012232
Q ss_pred ------------------HHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchh--hhhcccCCCCCCCCCCCcceEEEEeC
Q 017367 90 ------------------YWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV--AYSSRFAFPSEESGSLSSFYYSFNAG 149 (373)
Q Consensus 90 ------------------~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~ys~~~g 149 (373)
.|.+.+..+ ++|+++||||||... ..|. .|......|.-. .-...+.+.-|
T Consensus 62 p~k~~i~~e~~~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~----~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g 132 (255)
T PF14582_consen 62 PDKSEINEEECYDSEALDKFFRILGEL--GVPVFVVPGNMDAPE----RFFLREAYNAEIVTPHIH---NVHESFFFWKG 132 (255)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHHCC---SEEEEE--TTS-SH----HHHHHHHHHCCCC-TTEE---E-CTCEEEETT
T ss_pred cchhhhhhhhhhhHHHHHHHHHHHHhc--CCcEEEecCCCCchH----HHHHHHHhccceecccee---eeeeeecccCC
Confidence 444444444 899999999999741 1111 111111112100 00112333345
Q ss_pred CEEEEEEcccccCCC---------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCC-cCCCCCCccchHHHHHHHHHHHHH
Q 017367 150 GIHFIMLGAYISYDK---------SGHQYKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYS 219 (373)
Q Consensus 150 ~~~fi~ldt~~~~~~---------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~ 219 (373)
.+.++++..+..... ..-..+|..+.|..++ . .-.|++.|.|+ ...+..+.+ .+.+.+++++
T Consensus 133 ~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk--~-~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~ 204 (255)
T PF14582_consen 133 EYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK--D-YRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKT 204 (255)
T ss_dssp TEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT--S-SEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHH
T ss_pred cEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcc--c-ccEEEEEecCCccCCCccccc-----HHHHHHHHHh
Confidence 588888887532211 1224455556666654 2 23677799998 333222222 2678899999
Q ss_pred cCccEEEeccccceee
Q 017367 220 YGVDIVFNGHVHAYER 235 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r 235 (373)
++.+++||||.|.-.-
T Consensus 205 ~~P~ivl~Ghihe~~~ 220 (255)
T PF14582_consen 205 YNPDIVLCGHIHESHG 220 (255)
T ss_dssp H--SEEEE-SSS-EE-
T ss_pred cCCcEEEecccccchh
Confidence 9999999999997553
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-09 Score=98.66 Aligned_cols=183 Identities=15% Similarity=0.205 Sum_probs=96.2
Q ss_pred EEEecCCCCCCh----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 23 AIVGDLGLTYNT----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 23 ~~igD~h~~~~~----~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+++||+|.+... ...++.+.+ .+||+|+++||++. .+. +.. ......+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~---------------~~~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDD---------------DPSTLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCC---------------CCCHHHHHHHHHHH
Confidence 689999987532 345555554 37999999999994 221 110 00112234555666
Q ss_pred hhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC------------
Q 017367 97 NLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD------------ 163 (373)
Q Consensus 97 ~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~------------ 163 (373)
.+. .++|+++++||||.... . .+.+...+.. .. ....+..++.+++++-.-....
T Consensus 63 ~L~~~~~~v~~v~GNHD~~~~---~---~~~~~~gi~~-----l~-~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~ 130 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFLIG---K---RFAREAGMTL-----LP-DPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKV 130 (231)
T ss_pred HHHHCCCeEEEEcCCCchhhh---H---HHHHHCCCEE-----EC-CCEEEEECCEEEEEEcCccccCCCHHHHHHHHHH
Confidence 664 36899999999997421 1 1111111100 01 1223566666666654321110
Q ss_pred -----------CChHHHHHHHHHHhhccCC---CCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecc
Q 017367 164 -----------KSGHQYKWLEKDLANVDRS---VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 164 -----------~~~~Q~~WL~~~L~~~~~~---~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
.......||.+.+.+..+. ..+ ..++.+. ...+.++++++++++++|||
T Consensus 131 r~~~~~~~~~~l~~~~r~~l~~~~~~~s~~~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~i~GH 193 (231)
T TIGR01854 131 HQPWLQRLFLHLPLAVRVKLARKIRAESRADKQMKS-QDIMDVN----------------PAEVAAVMRRYGVDRLIHGH 193 (231)
T ss_pred hCHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc-chhhCCC----------------HHHHHHHHHHcCCCEEEECC
Confidence 0112234444444432111 111 1111110 14467778888999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
+|.-+.. +... +..+..|++.|.-
T Consensus 194 tH~~~~~-~~~~---~~~~~~~~~lgdW 217 (231)
T TIGR01854 194 THRPAIH-PLQA---DGQPATRIVLGDW 217 (231)
T ss_pred ccCccee-eccc---CCCccEEEEECCC
Confidence 9987654 2210 1224578888875
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.6e-10 Score=96.89 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=25.4
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|.+. ++.+.+++++|+||+|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8899998731 5667789999999999875553
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.7e-09 Score=92.64 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=47.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+|++++||+|..... +++++.+.+.++|.|+++||++.. +.. ....+.|+ .+...+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 589999999965332 345555666799999999999942 110 01112222 12333444443
Q ss_pred hcCCCeEEecCCCCcC
Q 017367 99 VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~ 114 (373)
..+++.|.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 56899999999963
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.6e-10 Score=94.80 Aligned_cols=53 Identities=28% Similarity=0.549 Sum_probs=33.2
Q ss_pred HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh-hh--cCCCeEEecCCCCcC
Q 017367 41 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN-LV--SKVPIMVVEGNHEIE 114 (373)
Q Consensus 41 l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~-l~--~~~P~~~v~GNHD~~ 114 (373)
+.+.+||+|+++||++.. +.. .. ...|..+...+.. +. ...|+++++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~------~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDE------GKW--------------ST-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCC------Ccc--------------CC-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 345799999999999953 210 00 1334443333333 22 258999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.5e-09 Score=97.68 Aligned_cols=175 Identities=16% Similarity=0.129 Sum_probs=91.3
Q ss_pred eEEEEEecCCCCC-------C---hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH
Q 017367 20 KRIAIVGDLGLTY-------N---TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 88 (373)
Q Consensus 20 ~r~~~igD~h~~~-------~---~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~ 88 (373)
++|++++|+|... . ....++++.+..+| +++.+||++......+ + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 5899999999543 1 13567777777788 7899999995422100 0 001
Q ss_pred HHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC----------CCCCCcceEEEEeCCEEEEEEc-
Q 017367 89 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE----------SGSLSSFYYSFNAGGIHFIMLG- 157 (373)
Q Consensus 89 ~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~ys~~~g~~~fi~ld- 157 (373)
....+.+..+ + .-++++||||+... .+.+.........+.-. .......|-.++.+++++-++.
T Consensus 60 ~~~~~~l~~~--g-~d~~~~GNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL--G-YDAVTIGNHEFDYG--LDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc--C-CCEEeecccccccc--HHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1233444443 3 34577899998532 22333333322222100 0011233556778886654443
Q ss_pred -ccccCC----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEE
Q 017367 158 -AYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 158 -t~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl 226 (373)
+..... ......+-+++..+.. +.+...+|++.|.+... ...+.+.+ .++|++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDD------------DEELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEE
Confidence 321100 0012223333322222 24567899999977642 01121111 4899999
Q ss_pred eccccceee
Q 017367 227 NGHVHAYER 235 (373)
Q Consensus 227 ~GH~H~~~r 235 (373)
+||+|..+.
T Consensus 200 ggH~H~~~~ 208 (252)
T cd00845 200 GGHTHHLLE 208 (252)
T ss_pred cCCcCcccC
Confidence 999998543
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-08 Score=98.58 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=30.4
Q ss_pred CeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccc
Q 017367 19 PKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYA 58 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~ 58 (373)
.+||+++||+|++... .++++.+.+.++|+||++||++..
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 4999999999987421 234444556799999999999953
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.1e-09 Score=94.81 Aligned_cols=178 Identities=20% Similarity=0.210 Sum_probs=104.4
Q ss_pred EEEEEecCCCCCChHHHHHHHH----hCCCCEEEEcCccccccccccCCCCCC--ccccCCCCCCCcccchHHHHHHH--
Q 017367 21 RIAIVGDLGLTYNTTCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSD--CYSCSFSKTPIHETYQPRWDYWG-- 92 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~~l~----~~~pd~vi~~GDl~y~~~~~~~g~~~~--~~~~~~~~~~~~~~y~~~~~~~~-- 92 (373)
||++.|..+...........+. +.+||++|++||.+|.+.......... ............+.|...+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5788888776655444444554 679999999999999864211000000 00000001122333443443332
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCC---------c-------chhhhhcccCCCCCCCC--CCCcceEEEEeCCE-EE
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGN---------Q-------TFVAYSSRFAFPSEESG--SLSSFYYSFNAGGI-HF 153 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~---------~-------~~~~~~~~~~~p~~~~~--~~~~~~ys~~~g~~-~f 153 (373)
..++.+.+.+|++.++.+||+..+.+. . ....|...+..+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 235666778999999999999876433 1 11234333333332221 34678999999996 99
Q ss_pred EEEcccccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc--CccEEEecccc
Q 017367 154 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY--GVDIVFNGHVH 231 (373)
Q Consensus 154 i~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~--~v~lvl~GH~H 231 (373)
++||+.... ..+.....-++++..++.+. +-.++|||+.|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 12223334466676765554 34588999999
Q ss_pred ceeee
Q 017367 232 AYERS 236 (373)
Q Consensus 232 ~~~r~ 236 (373)
..+..
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 75544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.8e-09 Score=95.11 Aligned_cols=194 Identities=15% Similarity=0.107 Sum_probs=106.0
Q ss_pred eEEEEEecCCCCC-----------ChHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCcccchHH
Q 017367 20 KRIAIVGDLGLTY-----------NTTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 87 (373)
Q Consensus 20 ~r~~~igD~h~~~-----------~~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 87 (373)
++|++++|+|.-. .....++++.+++++ +++.+||++...... . + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-------------------~-~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-------------------T-A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-------------------h-h-cC
Confidence 5899999999311 113456666667788 999999999532110 0 0 00
Q ss_pred HHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC----------CCCCCcceEEEEeCCEEEEEE-
Q 017367 88 WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE----------SGSLSSFYYSFNAGGIHFIML- 156 (373)
Q Consensus 88 ~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~ys~~~g~~~fi~l- 156 (373)
.+...+.++.+ +.. +.++||||+... .+.+....+....|--. ....-..|..++.+++++-++
T Consensus 60 g~~~~~~l~~l--~~d-~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--GVD-LACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--CCc-EEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11234445544 333 668999998532 22333322222211100 001124677788898665544
Q ss_pred -cccccC---C--C----ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH-cCccEE
Q 017367 157 -GAYISY---D--K----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 225 (373)
Q Consensus 157 -dt~~~~---~--~----~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lv 225 (373)
.+.... . . -.+-.+.+++.+++..+.+...+|++.|.+... . . ++.++ .++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~---~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------D----K---RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H---HHHHhCCCCceE
Confidence 332111 0 0 122334444444444445678899999987521 1 1 23333 379999
Q ss_pred EeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 226 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 226 l~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
|+||.|..+.. ..++++.+-+|.-|...+
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~~vg 228 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFRTVY 228 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcceEE
Confidence 99999987632 235677777777776554
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-08 Score=94.59 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=106.2
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCccccccccccC--CCCCCccccCCCCCC
Q 017367 20 KRIAIVGDLGLTYN-----------------TTCTINHMSSNEPDLVLL-VGDVTYANLYLTN--GTGSDCYSCSFSKTP 79 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------------~~~~l~~l~~~~pd~vi~-~GDl~y~~~~~~~--g~~~~~~~~~~~~~~ 79 (373)
++|++++|+|.... ....++++.+.+++.+++ +||++.+.....- +.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~------------- 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKI------------- 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhc-------------
Confidence 58999999995421 134566666677888777 9999954321000 00
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC--------CCCCCcceEEEEeC-C
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE--------SGSLSSFYYSFNAG-G 150 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~--------~~~~~~~~ys~~~g-~ 150 (373)
+ ........+.|+.+ +.. +.++||||+... .+.+....+....|--. .......|..++.+ +
T Consensus 68 --~--~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g 138 (277)
T cd07410 68 --E--DGDPHPMIAAMNAL--GYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVG 138 (277)
T ss_pred --c--cCCCChHHHHHHhc--CCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCC
Confidence 0 00001234445555 444 667899998532 22333333333222110 00122356667888 8
Q ss_pred EEEEEEcccccC---------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 151 IHFIMLGAYISY---------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 151 ~~fi~ldt~~~~---------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
+++-++.-.... ....+.+++..++|++ .+...+|++.|........... . ......+
T Consensus 139 ~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~-~---~~~~~~~ 211 (277)
T cd07410 139 VKVGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL-T---GENAAYE 211 (277)
T ss_pred CEEEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc-C---CccHHHH
Confidence 776655432110 0011223444444443 4567899999987654321000 0 1112234
Q ss_pred HHHH-cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcc
Q 017367 216 LLYS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 261 (373)
Q Consensus 216 ll~~-~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~ 261 (373)
+.++ .++|++|+||.|...... ..+++..+-+|.-|...
T Consensus 212 la~~~~~vD~IlgGHsH~~~~~~-------~~~~~~v~q~g~~g~~v 251 (277)
T cd07410 212 LAEEVPGIDAILTGHQHRRFPGP-------TVNGVPVVQPGNWGSHL 251 (277)
T ss_pred HHhcCCCCcEEEeCCCccccccC-------CcCCEEEEcCChhhCEE
Confidence 4444 489999999999754321 12456666666655543
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-09 Score=94.69 Aligned_cols=197 Identities=16% Similarity=0.171 Sum_probs=97.1
Q ss_pred EEEecCCCCCCh---HHHHHHHHh----CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 23 AIVGDLGLTYNT---TCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 23 ~~igD~h~~~~~---~~~l~~l~~----~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+++||+|.+... ......+.+ .++|.|+++||++. .+...-. ... ......+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d--~~~~~~~------------~~~---~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFD--LWFGDDE------------VVP---PAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEE--EEecCCC------------CCC---hHHHHHHHHHH
Confidence 479999987543 222333332 48999999999994 2211000 000 11111123444
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 175 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~ 175 (373)
+.+..+.+++.++||||.... ..+........ .......+..++.+++++-.... ........|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHH
Confidence 455668999999999998521 11111111000 01111156778888888866432 1223333444332
Q ss_pred HhhccC-----C-CCCe--EEEEeCC----CCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc
Q 017367 176 LANVDR-----S-VTPW--LVATWHP----PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 243 (373)
Q Consensus 176 L~~~~~-----~-~~~~--iIv~~H~----P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~ 243 (373)
+..... . ..++ .+..... +................+.+.+++++++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 211000 0 0000 0000000 00000000111122345667777888999999999999866543
Q ss_pred cCCCCCEEEEeCC
Q 017367 244 LDPCGPVHITIGD 256 (373)
Q Consensus 244 ~~~~g~~yi~~G~ 256 (373)
.++..|+++|+
T Consensus 206 --~~~~~~~n~G~ 216 (217)
T cd07398 206 --LDGKLYINLGD 216 (217)
T ss_pred --ECCEEEEECCC
Confidence 23678888875
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.2e-08 Score=99.21 Aligned_cols=75 Identities=21% Similarity=0.354 Sum_probs=52.2
Q ss_pred eEEEEEecCCCCC---Ch-----------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTY---NT-----------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~---~~-----------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
+||+++||+|++. +. ..+++.+.+.++||||++||+... .. |..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~------~~------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDT------NN------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccC------CC------------CCH----
Confidence 5999999999982 11 234556667899999999999953 11 101
Q ss_pred HHHHHHHHHHhhh-hcCCCeEEecCCCCcCCC
Q 017367 86 PRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 86 ~~~~~~~~~l~~l-~~~~P~~~v~GNHD~~~~ 116 (373)
.....+.+.++.+ ..++|++++.||||....
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 1223456666666 358999999999998643
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=87.01 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=88.7
Q ss_pred eEEEEEecCCCCCC-----------------------hHHHHHHHHhC-CCCEE-EEcCccccccccccCCCCCCccccC
Q 017367 20 KRIAIVGDLGLTYN-----------------------TTCTINHMSSN-EPDLV-LLVGDVTYANLYLTNGTGSDCYSCS 74 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------------------~~~~l~~l~~~-~pd~v-i~~GDl~y~~~~~~~g~~~~~~~~~ 74 (373)
++|++++|+|.... ....++++.+. .+|.+ +.+||++......
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~------------ 68 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEA------------ 68 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHH------------
Confidence 47888899885310 12345666666 89977 5699999542110
Q ss_pred CCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC--------CCCCcceEEE
Q 017367 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES--------GSLSSFYYSF 146 (373)
Q Consensus 75 ~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~ys~ 146 (373)
+........+.|.. +++.++.||||+... ...+....+.+..|--.. ......|..+
T Consensus 69 ---------~~~~g~~~~~~l~~----~g~da~~GNHefd~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~ 133 (264)
T cd07411 69 ---------LYTRGQAMVDALNA----LGVDAMVGHWEFTYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIK 133 (264)
T ss_pred ---------hhcCChhHHHHHHh----hCCeEEecccccccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEE
Confidence 00011223333433 455555599998632 233333333333221100 0111235566
Q ss_pred EeCCEEE--EEEcccccCC--C--------ChHHHHHHHHHHhhcc-CCCCCeEEEEeCCCCcCCCCCCccchHHHHHHH
Q 017367 147 NAGGIHF--IMLGAYISYD--K--------SGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 213 (373)
Q Consensus 147 ~~g~~~f--i~ldt~~~~~--~--------~~~Q~~WL~~~L~~~~-~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l 213 (373)
+.+++++ |.+.+..... . .....+.+++.+.+.. ..+...+|++.|.+... . .
T Consensus 134 ~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~--------~----~-- 199 (264)
T cd07411 134 EVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV--------D----V-- 199 (264)
T ss_pred EECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh--------h----H--
Confidence 7888655 4444321100 0 1223444554433332 24567899999977531 0 1
Q ss_pred HHHHHH-cCccEEEeccccce
Q 017367 214 EALLYS-YGVDIVFNGHVHAY 233 (373)
Q Consensus 214 ~~ll~~-~~v~lvl~GH~H~~ 233 (373)
++.++ .++|++|+||.|..
T Consensus 200 -~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 200 -ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred -HHHhcCCCCcEEEeCccccc
Confidence 22233 37999999999974
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.5e-08 Score=88.31 Aligned_cols=189 Identities=17% Similarity=0.221 Sum_probs=100.7
Q ss_pred EEEEecCCCCCChH-HHHHHHHh---CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 22 IAIVGDLGLTYNTT-CTINHMSS---NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 22 ~~~igD~h~~~~~~-~~l~~l~~---~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
|++.||.|...... +.++.+++ .++|+||++||+.-. + +....++ -.....|. .+..|.+.++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~-------~~~p~k~~-~~~~f~~~~~g 68 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKC-------MAVPPKYR-KMGDFYKYYSG 68 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhh-------hccchhhh-hhhhHHHHhcC
Confidence 58999999754322 22333332 479999999999631 1 1110000 01112221 23445555555
Q ss_pred h-hcCCCeEEecCCCCcCCCCCCcchhhhh-cccCCCCCCCCCCCcce-----EEEEeCCEEEEEEccccc---C-----
Q 017367 98 L-VSKVPIMVVEGNHEIEAQAGNQTFVAYS-SRFAFPSEESGSLSSFY-----YSFNAGGIHFIMLGAYIS---Y----- 162 (373)
Q Consensus 98 l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~-----ys~~~g~~~fi~ldt~~~---~----- 162 (373)
+ ...+|+++|.||||... .+.... ..+. ..+.+ ..++++|++|..|..... +
T Consensus 69 ~~~~p~~t~fi~GNHE~~~-----~l~~l~~gg~v--------~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 69 EKKAPILTIFIGGNHEASN-----YLWELPYGGWV--------APNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred CccCCeeEEEECCCCCCHH-----HHHhhcCCCee--------cCcEEEecCCCEEEECCeEEEEecccccccccccccc
Confidence 4 34778899999999631 111110 0010 12233 246689999999986321 1
Q ss_pred ---CCChHHHHHHH-------HHHhhccCCCCCeEEEEeCCCCcCCCCCCccc---------------hHHHHHHHHHHH
Q 017367 163 ---DKSGHQYKWLE-------KDLANVDRSVTPWLVATWHPPWYSSYSSHYRE---------------AECMRVEMEALL 217 (373)
Q Consensus 163 ---~~~~~Q~~WL~-------~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll 217 (373)
.....++..+- +.|.... .+.-|+++|.|+.......... ...-...+.+++
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll 212 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELL 212 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHH
Confidence 11233433211 1122221 2346889999886643211100 011235677899
Q ss_pred HHcCccEEEeccccc-eeeeee
Q 017367 218 YSYGVDIVFNGHVHA-YERSNR 238 (373)
Q Consensus 218 ~~~~v~lvl~GH~H~-~~r~~p 238 (373)
++.++.++|+||.|. |++..|
T Consensus 213 ~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 213 KHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHhCCCEEEEecCCcccceecC
Confidence 999999999999997 555543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.6e-09 Score=90.75 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=24.1
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|.+. +..+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8889999754 1123478999999999877653
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=80.49 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=29.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+||+++||+|..... ....+.....++|+|||+||++.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 699999999986532 34444455679999999999995
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.4e-08 Score=91.46 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=47.1
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|.+... .++++.+.+.++|+||++||++... ... ...
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~----~~~-----------------~~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVR----KAI-----------------TQN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCC----CCC-----------------CHH
Confidence 589999999987421 1234444568999999999999421 000 011
Q ss_pred HHHHHHH-HHhhh-hcCCCeEEecCCCCcC
Q 017367 87 RWDYWGR-FMQNL-VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~-~l~~l-~~~~P~~~v~GNHD~~ 114 (373)
....+.+ +++.+ ..++|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1222222 23444 2479999999999974
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.6e-08 Score=88.21 Aligned_cols=202 Identities=18% Similarity=0.149 Sum_probs=102.1
Q ss_pred eEEEEEecCCCCCC--------h---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH
Q 017367 20 KRIAIVGDLGLTYN--------T---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 88 (373)
Q Consensus 20 ~r~~~igD~h~~~~--------~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~ 88 (373)
++|++++|+|.... . ...++++.+.+.++++.+||++.+.... .. ...
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~-------------------~~--~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS-------------------DL--DKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh-------------------hh--cCC
Confidence 58999999996421 1 2345555544678999999999532110 00 001
Q ss_pred HHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEeC-CEEE--EEEc
Q 017367 89 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAG-GIHF--IMLG 157 (373)
Q Consensus 89 ~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~g-~~~f--i~ld 157 (373)
....+.|..+ +..+ .++||||+... .+.+..+.+.+..|--.. + ..-..|--++.+ ++++ +++-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~G--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDYG--LDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccCC--HHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1233444444 5555 56899998532 233333333333332110 0 011234455677 7554 4444
Q ss_pred cccc-C--CC-------ChHHHHHHHHH-HhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH-cCccEE
Q 017367 158 AYIS-Y--DK-------SGHQYKWLEKD-LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 225 (373)
Q Consensus 158 t~~~-~--~~-------~~~Q~~WL~~~-L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lv 225 (373)
+... . .. -.+-.+-+++. ....++.+...+|++.|.+....... . . ... +.++ .++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~~~---la~~~~giDvI 205 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----STE---LAANVTGIDLI 205 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----HHH---HHHhCCCceEE
Confidence 4210 0 00 01122334333 23333346778999999887543211 1 0 112 2223 379999
Q ss_pred EeccccceeeeeecccCccCCCCCEEEEeCCCCCcc
Q 017367 226 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 261 (373)
Q Consensus 226 l~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~ 261 (373)
|.||.|....... ...+++..+.+|.-|...
T Consensus 206 igGH~H~~~~~~~-----~~~~~~~ivq~g~~g~~v 236 (257)
T cd07408 206 IDGHSHTTIEIGK-----KDGNNVLLTQTGAYLANI 236 (257)
T ss_pred EeCCCcccccCcc-----cccCCeEEEcCChHHceE
Confidence 9999998654310 012455556566555543
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=89.36 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=96.5
Q ss_pred EEEecCCCCCChHH----HHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 23 AIVGDLGLTYNTTC----TINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 23 ~~igD~h~~~~~~~----~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
++|||+|.+..... .++-|... +.|.+.++||++. .|. |. +.+.+..++....+.
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~---------------~~~~~~~~~V~~~l~ 61 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GD---------------DEPPQLHRQVAQKLL 61 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cC---------------CcccHHHHHHHHHHH
Confidence 36999999844322 23333333 5599999999993 332 11 112223344444444
Q ss_pred hh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHH
Q 017367 97 NL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 174 (373)
Q Consensus 97 ~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~ 174 (373)
.+ .++.|+|+++||||... ...+...+. +- .-+.+-..+..|-+++++-.-. +.....++.|+..
T Consensus 62 ~~a~~G~~v~~i~GN~Dfll------~~~f~~~~g~~~------l~~~~~~~~l~g~~~Ll~HGD~-f~t~~~~y~~~r~ 128 (237)
T COG2908 62 RLARKGTRVYYIHGNHDFLL------GKRFAQEAGGMT------LLPDPIVLDLYGKRILLAHGDT-FCTDDRAYQWFRY 128 (237)
T ss_pred HHHhcCCeEEEecCchHHHH------HHHHHhhcCceE------EcCcceeeeecCcEEEEEeCCc-ccchHHHHHHHHH
Confidence 44 56799999999999642 112222221 10 1112223444455555553321 1122333444332
Q ss_pred HHhhccCCCCCeEEEEeCCCCc----------CCC--CCC-----ccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 175 DLANVDRSVTPWLVATWHPPWY----------SSY--SSH-----YREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 175 ~L~~~~~~~~~~iIv~~H~P~~----------~~~--~~~-----~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
....+-. ..++.+.|+. ... ... ..-.+.+.+...+.+++++|+.+++||+|.-...
T Consensus 129 ~~~~~~~-----~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~- 202 (237)
T COG2908 129 KVHWAWL-----QLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH- 202 (237)
T ss_pred HcccHHH-----HHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc-
Confidence 2211100 0011111110 000 000 0001123456778888999999999999985544
Q ss_pred ecccCccCCCCCEEEEeCCCC
Q 017367 238 RVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 238 p~~~~~~~~~g~~yi~~G~gG 258 (373)
+-.+..|++.|+-.
T Consensus 203 -------~i~~~~yi~lGdW~ 216 (237)
T COG2908 203 -------NIPGITYINLGDWV 216 (237)
T ss_pred -------cCCCceEEecCcch
Confidence 34569999999865
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-07 Score=86.83 Aligned_cols=211 Identities=14% Similarity=0.151 Sum_probs=105.9
Q ss_pred eEEEEEecCCCCCC---------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 20 KRIAIVGDLGLTYN---------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 20 ~r~~~igD~h~~~~---------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
++|++++|+|.... ....++++.+..++ ++|.+||++....+.+.-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~------------------ 62 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESAL------------------ 62 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhc------------------
Confidence 48999999995421 12345555555554 899999999543211000
Q ss_pred chHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhc------------------ccCC-----CCCC-CCCC
Q 017367 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS------------------RFAF-----PSEE-SGSL 139 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~------------------~~~~-----p~~~-~~~~ 139 (373)
+ ......+.|..+ +.- +.++||||+... ...+..+.+ .|.+ .... ....
T Consensus 63 ~--~g~~~~~~~n~~--g~D-a~t~GNHefd~G--~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~ 135 (288)
T cd07412 63 L--QDEPTIEALNAM--GVD-ASAVGNHEFDEG--YAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPA 135 (288)
T ss_pred c--cCCcHHHHHHhh--CCe-eeeecccccccC--HHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcc
Confidence 0 001233444444 444 477899998632 112222211 1111 0000 0011
Q ss_pred CcceEEEEeCCEEEEEEcc--ccc-C--C-------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchH
Q 017367 140 SSFYYSFNAGGIHFIMLGA--YIS-Y--D-------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 207 (373)
Q Consensus 140 ~~~~ys~~~g~~~fi~ldt--~~~-~--~-------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~ 207 (373)
-..|.-++.+++++-++.- ... . . .-..-.+-+++.++++++.+.+.+|++.|........... ..
T Consensus 136 ~~py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~ 213 (288)
T cd07412 136 LPPYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CS 213 (288)
T ss_pred cCCEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cc
Confidence 1245557788866544432 110 0 0 0122334455555555434677899999977643221100 00
Q ss_pred HHHHHHHHHHHH--cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 208 CMRVEMEALLYS--YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 208 ~~~~~l~~ll~~--~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
.......+++.+ .++|++|+||+|..... +. ...++++.+.+|.-|...+
T Consensus 214 ~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~~~~v~q~g~~g~~vg 265 (288)
T cd07412 214 AASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGNPRLVTQAGSYGKAVA 265 (288)
T ss_pred ccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcCCEEEEecChhhceeE
Confidence 001122334444 37999999999986542 10 0235777788887776544
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-07 Score=84.43 Aligned_cols=174 Identities=17% Similarity=0.254 Sum_probs=93.6
Q ss_pred eEEEEEecCCCCCC----------------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCC
Q 017367 20 KRIAIVGDLGLTYN----------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 20 ~r~~~igD~h~~~~----------------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
++|++.+|+|.... ....++++.+..++ +++.+||++.+....
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~-------------- 66 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWY-------------- 66 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchh--------------
Confidence 57899999995310 12345666556677 566699999543210
Q ss_pred CCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-----------CCCCcceEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----------GSLSSFYYS 145 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-----------~~~~~~~ys 145 (373)
..+ ..+...+.|..+ +.. +.++||||+... .+.+..+.+....|.-.. ...-..|..
T Consensus 67 -----~~~--~g~~~~~~ln~~--g~D-~~~lGNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i 134 (281)
T cd07409 67 -----TLY--KGNADAEFMNLL--GYD-AMTLGNHEFDDG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTI 134 (281)
T ss_pred -----hhc--CChHHHHHHHhc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEE
Confidence 000 112234455554 555 456799998643 223333333332221110 001134556
Q ss_pred EEeCCEEEEEE--cccccC---C--C---ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 146 FNAGGIHFIML--GAYISY---D--K---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 146 ~~~g~~~fi~l--dt~~~~---~--~---~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
++.+++++-++ -+.... . . -.+..+.+++.++++++.+...+|++.|..... . . +
T Consensus 135 ~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d----~---~ 199 (281)
T cd07409 135 LTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D----K---E 199 (281)
T ss_pred EEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H----H---H
Confidence 78888665444 332110 0 0 123445566766666555677899999976421 1 1 2
Q ss_pred HHHH-cCccEEEecccccee
Q 017367 216 LLYS-YGVDIVFNGHVHAYE 234 (373)
Q Consensus 216 ll~~-~~v~lvl~GH~H~~~ 234 (373)
+.++ .++|++|+||+|...
T Consensus 200 la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 200 IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHcCCCCcEEEeCCcCccc
Confidence 3333 379999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.8e-07 Score=90.45 Aligned_cols=201 Identities=18% Similarity=0.217 Sum_probs=102.6
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHH---------hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 18 YPKRIAIVGDLGLTYNT------TCTINHMS---------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~------~~~l~~l~---------~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
...+++++||+|.+... ...++.+. +.+++.||++||++...+... +... +....+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cchh--------hccchh
Confidence 46899999999987531 23445555 567999999999994311000 0000 000011
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCc--chhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 160 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~ 160 (373)
.+ .+++.+.++++.+...+|+++++||||.......+ ....+...+.... .....+ -+.+.+++.++++.....
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~--v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHN--VTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCC--eEEecC-CeEEEECCEEEEEECCCC
Confidence 11 22445667777777789999999999975321110 1111211121100 001122 245778888888775432
Q ss_pred -----cCC---CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccc
Q 017367 161 -----SYD---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 161 -----~~~---~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+- ....-.+.|++.|..-. -.| ..-.+.|.+.... .. +.-..-.+++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~rH--laP--t~p~~~~~~p~~~-D~------------lvi~~~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRRH--LAP--IYGGRTPIAPEKE-DY------------LVIDEVPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhcc--cCC--CCCCCEEeCcCCC-CC------------EEEecCCCEEEeCCCCc
Confidence 010 11223455666665311 001 0000122222110 00 11112369999999998
Q ss_pred eeeeeecccCccCCCCCEEEEeCC
Q 017367 233 YERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 233 ~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
+.... -+|+.+|.+|+
T Consensus 452 ~~~~~--------~~g~~~IN~gs 467 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGT 467 (504)
T ss_pred cceEE--------ECCEEEEECCc
Confidence 76542 35788888776
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-06 Score=95.85 Aligned_cols=184 Identities=17% Similarity=0.194 Sum_probs=96.6
Q ss_pred CCeEEEEEecCCCCCC-h---HHHHHHHHhCCCCEEEE-cCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 18 YPKRIAIVGDLGLTYN-T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-~---~~~l~~l~~~~pd~vi~-~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
..++|++++|+|.... . ...++++.+.+++.|++ +||++.+.... .. .......
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------------------~~--~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYS-------------------NL--LKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchh-------------------hh--cCChHHH
Confidence 4699999999996532 2 34566666778888766 99999532110 00 0112233
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcc--------------cCC-------CCC-CCCCCCcceEEEEeCC
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--------------FAF-------PSE-ESGSLSSFYYSFNAGG 150 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~--------------~~~-------p~~-~~~~~~~~~ys~~~g~ 150 (373)
+.|..+ +. -+.++||||+.... +.+..+... |.+ ... .....-..|.-++.++
T Consensus 718 ~~ln~l--g~-d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM--GY-DASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc--CC-CEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 444444 22 35699999986431 222222211 110 000 0001113456678888
Q ss_pred EEE--EEEcccc-cC--CC-------ChHHHHHHHHHHhhcc-CCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHH
Q 017367 151 IHF--IMLGAYI-SY--DK-------SGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 217 (373)
Q Consensus 151 ~~f--i~ldt~~-~~--~~-------~~~Q~~WL~~~L~~~~-~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll 217 (373)
+++ |++-+.. .. .. -.+..+.+++..++.+ ..+...+|++.|.......... .....++.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~-------~~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG-------EITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc-------ccHHHHHH
Confidence 665 4443321 00 00 1123334444444443 2467789999998764321110 11233444
Q ss_pred HHc-CccEEEecccccee
Q 017367 218 YSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 218 ~~~-~v~lvl~GH~H~~~ 234 (373)
++. +||++|.||+|...
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 444 79999999999754
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-06 Score=79.74 Aligned_cols=195 Identities=16% Similarity=0.185 Sum_probs=95.4
Q ss_pred EEEecCCCCCCh------HHHHHHHHhC-----CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHH
Q 017367 23 AIVGDLGLTYNT------TCTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 91 (373)
Q Consensus 23 ~~igD~h~~~~~------~~~l~~l~~~-----~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~ 91 (373)
+++||+|.+... ...++.|... ++|.||++||++...... .+... .-..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~---------~~~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE---------ELEILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh---------hhhhhhHHHHHHHH
Confidence 689999976432 1233444333 569999999999531000 00000 00000112234556
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc-c----C--
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI-S----Y-- 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~-~----~-- 162 (373)
.++++.+...+|+++++||||....... .....+.+.+. +.+ .....+. +.+.+++.+|++..... . .
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np-~~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNP-ALVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCC-CEEEECCEEEEEECCCCHHHHHHhCC
Confidence 7778888778999999999998532111 11122222211 000 0011222 35778888887653211 0 0
Q ss_pred -CCChHHHHHHHHHHhhccCCC-CCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecc
Q 017367 163 -DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240 (373)
Q Consensus 163 -~~~~~Q~~WL~~~L~~~~~~~-~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~ 240 (373)
.....-.++++..|....-.. .+-. .|.+... ... +......+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~hl~P~~~~~-----~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~--- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRHLAPIYGGR-----TPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV--- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcccCCCCCCC-----EeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE---
Confidence 111223455665555421110 1100 0111100 000 1112367899999999876552
Q ss_pred cCccCCCCCEEEEeCC
Q 017367 241 NYTLDPCGPVHITIGD 256 (373)
Q Consensus 241 ~~~~~~~g~~yi~~G~ 256 (373)
-++++++..|+
T Consensus 208 -----~~~~~~vn~Gs 218 (243)
T cd07386 208 -----YRGVLLVNSGT 218 (243)
T ss_pred -----ECCEEEEECCC
Confidence 24788887776
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.3e-06 Score=78.19 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=103.0
Q ss_pred CeEEEEEecCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~--------------~~~~l~~l~----~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
+++|++.+|+|.... ..+.++++. +..++ +++.+||++.+..+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 599999999995421 122333332 23555 67789999965322
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCC---------C--CCCcceEEEE
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEES---------G--SLSSFYYSFN 147 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~---------~--~~~~~~ys~~ 147 (373)
...+........++|..+ +.- +.++||||+...... ..+..+.+....|--.. . .....|..++
T Consensus 67 -~~~~~~~g~~~~~~mN~m--gyD-a~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~ 142 (282)
T cd07407 67 -SDASPPPGSYSNPIFRMM--PYD-LLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFT 142 (282)
T ss_pred -eeeecCCChHHHHHHHhc--CCc-EEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEE
Confidence 111101123345555555 222 588999999532111 11111222111121000 0 1112355567
Q ss_pred eC-CEEE--EEEcccccC-------CCChH--HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 148 AG-GIHF--IMLGAYISY-------DKSGH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 148 ~g-~~~f--i~ldt~~~~-------~~~~~--Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
.+ ++++ |++-+.... ....+ +.+|+.+.|++ .+...+|++.|....... .. .+....
T Consensus 143 ~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~~---~~~~~~ 211 (282)
T cd07407 143 TKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----EF---KVLHDA 211 (282)
T ss_pred cCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----cH---HHHHHH
Confidence 76 7664 444332110 01112 22477777763 356789999998764321 11 111122
Q ss_pred HHHHc-Ccc-EEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcccc
Q 017367 216 LLYSY-GVD-IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 263 (373)
Q Consensus 216 ll~~~-~v~-lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~ 263 (373)
+.++. +++ ++|.||+|..... + ..+++..+-.|.-|...+.
T Consensus 212 la~~~~~id~~Ii~GHsH~~~~~-~------~~~~~~ivq~G~~g~~lg~ 254 (282)
T cd07407 212 IRKIFPDTPIQFLGGHSHVRDFT-Q------YDSSSTGLESGRYLETVGW 254 (282)
T ss_pred HHHhCCCCCEEEEeCCcccccce-e------ccCcEEEEeccchhhceEE
Confidence 33333 567 7999999975332 1 1256666667776665543
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.6e-06 Score=77.55 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=90.9
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHHHhC-----CCCEEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 20 KRIAIVGDLGLTYN-----------TTCTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------~~~~l~~l~~~-----~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
++|++.+|+|.... ....++++.+. ..-+++.+||++.+... ...
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-------------------~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-------------------SDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-------------------HHh
Confidence 57999999996421 12345555432 33589999999853211 000
Q ss_pred chHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC------C-CCCcceEEEEeCCEEEEEE
Q 017367 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES------G-SLSSFYYSFNAGGIHFIML 156 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~------~-~~~~~~ys~~~g~~~fi~l 156 (373)
++ .....+.|..+ +.-+ .++||||+... ...+....+....|--.. + .....|.-++.+++++-++
T Consensus 62 ~~--g~~~~~~~n~~--g~Da-~~~GNHEfD~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 QD--AEPDFRGMNLV--GYDA-MAVGNHEFDNP--LEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred cC--cchHHHHHHhh--CCcE-EeecccccccC--HHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 10 11223445555 4444 46699999643 222222222111111000 0 1123456677888765544
Q ss_pred --ccccc-C--CC----C---hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccE
Q 017367 157 --GAYIS-Y--DK----S---GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDI 224 (373)
Q Consensus 157 --dt~~~-~--~~----~---~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~l 224 (373)
-+... . .. + .+.++=+++.++++++.+...+|++.|.......... ........+.+.+...++|+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCE
Confidence 33211 0 00 0 1122223333333332356789999998875322100 00001122333333358999
Q ss_pred EEecccccee
Q 017367 225 VFNGHVHAYE 234 (373)
Q Consensus 225 vl~GH~H~~~ 234 (373)
+|.||+|...
T Consensus 213 IigGHsH~~~ 222 (285)
T cd07405 213 IVGGHSQDPV 222 (285)
T ss_pred EEeCCCCccc
Confidence 9999999844
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=84.72 Aligned_cols=73 Identities=25% Similarity=0.409 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|++... ...++.+.+.++|+||++||++.. .. ... .
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~------~~--------------p~~--~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDT------AN--------------PPA--E 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCC------CC--------------CCH--H
Confidence 589999999986421 123444556799999999999942 11 001 1
Q ss_pred HHHHHHHHHhhhh-cC-CCeEEecCCCCcC
Q 017367 87 RWDYWGRFMQNLV-SK-VPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~~l~~l~-~~-~P~~~v~GNHD~~ 114 (373)
....+.+.++.+. .. +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 1233455566653 24 8999999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.4e-06 Score=76.70 Aligned_cols=189 Identities=15% Similarity=0.239 Sum_probs=101.2
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 21 RIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 21 r~~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
||+++||+=..... ...+.++.+ .++||+|..||.+... .|. . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg----~gl------------------~---~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGG----KGI------------------T---PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCC----CCC------------------C---HHHHHHHH
Confidence 68999998543332 234555544 4799999999998421 111 0 12233444
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhccc---CCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCCChHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF---AFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDKSGHQYK 170 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~---~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~~~~Q~~ 170 (373)
.+ ++-+ .+.|||++... ....+.+.. -.|.+-+ ...+..|..++.+++++-+++-. ........-++
T Consensus 56 ~~--G~D~-iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDV-ITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCE-EEecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 44 5555 45599998643 222332222 1122211 12234577788888776665532 11111122234
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCE
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPV 250 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~ 250 (373)
-+++.++++++ +.+.+||.+|.-.. .+ ..++...+ +.+||+++.||+|....- ..+-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t---------sE--k~ala~~l-dg~VdvIvGtHTHv~t~d-----~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT---------SE--KIALGWYL-DGRVSAVVGTHTHVQTAD-----ERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC---------HH--HHHHHHhC-CCCceEEEeCCCCccCCc-----cEEeeCCeE
Confidence 46666666553 56789999996321 11 11222211 336999999999974322 112367888
Q ss_pred EEE-eCCCCC
Q 017367 251 HIT-IGDGGN 259 (373)
Q Consensus 251 yi~-~G~gG~ 259 (373)
|++ .|.-|.
T Consensus 191 ~itd~Gm~G~ 200 (255)
T cd07382 191 YITDVGMTGP 200 (255)
T ss_pred EEecCccccC
Confidence 876 344444
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-07 Score=83.75 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=25.7
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y 57 (373)
||+++||+|..... .++++.+.. .++|.|+++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 78999999965332 223333322 36899999999994
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=75.25 Aligned_cols=63 Identities=17% Similarity=0.276 Sum_probs=40.4
Q ss_pred EEEecCCCCCCh----------------HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 23 AIVGDLGLTYNT----------------TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 23 ~~igD~h~~~~~----------------~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
.++||+|.+... .+.++.+.+. ++|.||++||++.. +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFG------GK------------------ 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCC------CC------------------
Confidence 478999987532 1234444442 78999999999942 21
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
... +.+.++.+ ..|++.|+||||..
T Consensus 58 ~~~---~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 AGT---ELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred hHH---HHHHHHhC--CCCeEEEeCCCCch
Confidence 011 13344444 56899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.7e-07 Score=82.93 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=19.6
Q ss_pred HHHHHHHHcCccEEEecccccee
Q 017367 212 EMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 212 ~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.+.++++..+.+++++||+|...
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~ 180 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEG 180 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeec
Confidence 57778888899999999999744
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.9e-07 Score=88.02 Aligned_cols=74 Identities=26% Similarity=0.464 Sum_probs=47.9
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|++... ..+++.+.+.+||+||++||++.. +.. ..+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~~-- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PSY-- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cHH--
Confidence 589999999986321 123444556899999999999942 110 011
Q ss_pred HHHHHHHHHhhhh-cCCCeEEecCCCCcCC
Q 017367 87 RWDYWGRFMQNLV-SKVPIMVVEGNHEIEA 115 (373)
Q Consensus 87 ~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~ 115 (373)
....+.+++..+. .++|+++|+||||...
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSVA 88 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCChh
Confidence 1122334444442 3689999999999753
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.3e-05 Score=68.68 Aligned_cols=192 Identities=16% Similarity=0.160 Sum_probs=105.1
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+||+++||.=..... ...+..+.+ .++||+|..||.+... .|.. ....+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG----~Gi~---------------------~~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHG----KGLT---------------------LKIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCC----CCCC---------------------HHHHHHH
Confidence 589999998533211 234555554 4789999999999421 0110 1122333
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchhhhh--cccCCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCC--ChHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYS--SRFAFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDK--SGHQ 168 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~--~~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~--~~~Q 168 (373)
... ++-++.+ |||.+... +.+.... .+.-.|.+-+ ...+..|..++.++.++-+++-. ..... ...-
T Consensus 56 ~~~--GvDviT~-GNH~~Dkg---e~~~~i~~~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQS--GVNYITM-GNHTWFQK---LILDVVINQKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hhc--CCCEEEc-cchhccCc---HHHHHHhccccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 333 6776555 99999643 1111110 1111122211 12344567778888776666532 11111 1223
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCC
Q 017367 169 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 248 (373)
Q Consensus 169 ~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g 248 (373)
++-+++.+++++. +.+.+||.+|.-.. . .+.....+-+.+|++|+.-|+|...--. .+-|+|
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haeat-----------s-EK~a~~~~ldg~vsaVvGtHtHV~TaD~-----~il~~g 191 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAETT-----------S-EKNAFGMAFDGYVTAVVGTHTHVPTADL-----RILPKG 191 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCCH-----------H-HHHHHHHHhCCCccEEEeCCCCCCCCcc-----eeCCCC
Confidence 3345555555543 36789999995321 1 1334456666799999999999633221 123789
Q ss_pred CEEEE-eCCCCCc
Q 017367 249 PVHIT-IGDGGNL 260 (373)
Q Consensus 249 ~~yi~-~G~gG~~ 260 (373)
+-|++ +|..|..
T Consensus 192 tayitD~Gm~G~~ 204 (266)
T TIGR00282 192 TAYITDVGMTGPF 204 (266)
T ss_pred CEEEecCCcccCc
Confidence 99987 4555553
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.2e-06 Score=79.63 Aligned_cols=113 Identities=18% Similarity=0.308 Sum_probs=69.2
Q ss_pred CCeEEEEEecCCCCCCh--------------HHHHHHH----H-hCCCCEEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 18 YPKRIAIVGDLGLTYNT--------------TCTINHM----S-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~--------------~~~l~~l----~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
.++|++.++|.|+-.+. +..+.+. . ..+||+++++||+.. .|....
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfD------eG~~~~--------- 111 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFD------EGQWAG--------- 111 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccc------cCccCC---------
Confidence 47999999999965421 1112221 1 259999999999994 233211
Q ss_pred CCcccchHHHHHHHHHHhhh---hcCCCeEEecCCCCcCCCCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEE
Q 017367 79 PIHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 153 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l---~~~~P~~~v~GNHD~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~f 153 (373)
..+|....+.++.+ ...+|++.++||||+...... .....|.+.| ++...+|++++..|
T Consensus 112 ------~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf 175 (410)
T KOG3662|consen 112 ------DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTF 175 (410)
T ss_pred ------hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCcee
Confidence 23444432223333 247999999999999643211 1112333333 33456789999999
Q ss_pred EEEccccc
Q 017367 154 IMLGAYIS 161 (373)
Q Consensus 154 i~ldt~~~ 161 (373)
+++|++..
T Consensus 176 ~~~d~~~l 183 (410)
T KOG3662|consen 176 VMFDSNAL 183 (410)
T ss_pred EEeeehhh
Confidence 99998753
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-05 Score=78.91 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=112.2
Q ss_pred CCeEEEEEecCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN------------T----TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 80 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~------------~----~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~ 80 (373)
..++|++.+|+|.... . ...++++.++ +..++|.+||++.++...+.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~---------------- 88 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY---------------- 88 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc----------------
Confidence 4699999999996432 1 1234555444 44689999999965322111
Q ss_pred cccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCC---------CCCCCCcceEEEEeCCE
Q 017367 81 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE---------ESGSLSSFYYSFNAGGI 151 (373)
Q Consensus 81 ~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~~~~ys~~~g~~ 151 (373)
........+.|..+ +.- +.++||||+... .+.+..+......|-- ......+.|.-++.+++
T Consensus 89 ----~~~g~~~~~~mN~m--~yD-a~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 89 ----LTKGEPTVDLLNAL--GYD-AMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ----ccCCChHHHHHhhc--CCc-EEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 01112234555555 222 678999999643 2223333333333310 01123356778888886
Q ss_pred EE--EEEcccc-c-C---C-----CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH
Q 017367 152 HF--IMLGAYI-S-Y---D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS 219 (373)
Q Consensus 152 ~f--i~ldt~~-~-~---~-----~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~ 219 (373)
++ |++-+.. . + . .-....+++++.+.+.+++....+|++.|.+............ ...... .
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~----~- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVA----V- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-cccccc----c-
Confidence 54 5544311 0 1 1 1235566777777776644467899999988764322111000 000000 0
Q ss_pred cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcccc
Q 017367 220 YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 263 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~ 263 (373)
..+|+++.||.|.+--... .....+++..+..|.-|...+.
T Consensus 234 ~~iD~i~~GH~H~~~~~~~---~~~~~~~t~ivqag~~gk~vG~ 274 (517)
T COG0737 234 PGIDLIIGGHSHTVFPGGD---KPGTVNGTPIVQAGEYGKYVGV 274 (517)
T ss_pred cCcceEeccCCcccccCCc---ccCccCCEEEEccChhhCceeE
Confidence 3499999999996322110 0012245566666666665444
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.9e-05 Score=80.34 Aligned_cols=188 Identities=18% Similarity=0.176 Sum_probs=92.0
Q ss_pred CCeEEEEEecCCCCCC--------h---HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 18 YPKRIAIVGDLGLTYN--------T---TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~--------~---~~~l~~l~~-----~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
..++|++++|+|.... . ...++++.+ ...-++|.+||++.+....
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s------------------- 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES------------------- 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh-------------------
Confidence 4799999999996532 1 233444442 2235899999998542110
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEeCCEEE
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIHF 153 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~g~~~f 153 (373)
..+. .....+.|..+ +.- +.++||||+... .+.+..+......|--.. + ..-..|.-++.+++++
T Consensus 94 ~~~~--g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQD--AEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhcC--CchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 0010 11223445544 444 456799998643 222222222222221100 0 1123456678888665
Q ss_pred EEEc--cccc--C-CC-------ChHHHHHHHHHHhhccC-CCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc
Q 017367 154 IMLG--AYIS--Y-DK-------SGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY 220 (373)
Q Consensus 154 i~ld--t~~~--~-~~-------~~~Q~~WL~~~L~~~~~-~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~ 220 (373)
-++. +... . .. -....+-+++.+++.++ .+...+|++.|.......... ..... ...+.+-+...
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~~-d~~la~~~~~~ 244 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAPG-DVEMARSLPAG 244 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCcc-HHHHHHhCCcc
Confidence 4443 2211 0 00 01122223344444332 367789999998774322110 00000 01222222223
Q ss_pred CccEEEeccccce
Q 017367 221 GVDIVFNGHVHAY 233 (373)
Q Consensus 221 ~v~lvl~GH~H~~ 233 (373)
+||++|.||+|..
T Consensus 245 ~IDvIlgGHsH~~ 257 (551)
T PRK09558 245 GLDMIVGGHSQDP 257 (551)
T ss_pred CceEEEeCCCCcc
Confidence 7999999999974
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.6e-05 Score=74.80 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=26.2
Q ss_pred eEEEEEecCCCCCC-------hHHHHHHHHhC----C-CCEEEEcCccccc
Q 017367 20 KRIAIVGDLGLTYN-------TTCTINHMSSN----E-PDLVLLVGDVTYA 58 (373)
Q Consensus 20 ~r~~~igD~h~~~~-------~~~~l~~l~~~----~-pd~vi~~GDl~y~ 58 (373)
++|++.+|+|.... ....++++.+. . .-+++.+||++.+
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qG 51 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIP 51 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccC
Confidence 57999999997632 12345555432 3 3589999999954
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.8e-05 Score=77.96 Aligned_cols=174 Identities=16% Similarity=0.169 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCC-------------------h---HHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCCC
Q 017367 20 KRIAIVGDLGLTYN-------------------T---TCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 20 ~r~~~igD~h~~~~-------------------~---~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
++|++++|+|.... . ...++++.+..+ -+++.+||++.+..+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~--------------- 65 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLY--------------- 65 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccc---------------
Confidence 57899999995310 0 123455544444 588899999964321
Q ss_pred CCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC------C----CCCcceEEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES------G----SLSSFYYSF 146 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~------~----~~~~~~ys~ 146 (373)
...+. .+...++|..+ +.- +.++||||+... .+.+..+.+....|--.. . ..-..|.-+
T Consensus 66 ----~~~~~--g~~~i~~~N~~--g~D-a~~lGNHEFd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~ 134 (550)
T TIGR01530 66 ----FTLFG--GRADAALMNAA--GFD-FFTLGNHEFDAG--NEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIF 134 (550)
T ss_pred ----hhhcC--CHHHHHHHhcc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEE
Confidence 11111 11223444444 222 688999998642 223333333222221100 0 012345667
Q ss_pred EeCCE--EEEEEccccc-C---CCC-----hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 147 NAGGI--HFIMLGAYIS-Y---DKS-----GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 147 ~~g~~--~fi~ldt~~~-~---~~~-----~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
+.+++ -||++.+... . ... ...++=+++..+..++.+...+|++.|..... . .+
T Consensus 135 ~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~ 199 (550)
T TIGR01530 135 ERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CE 199 (550)
T ss_pred EECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HH
Confidence 88884 4566644211 0 010 11222233333333334567899999965311 1 12
Q ss_pred HHHHc-CccEEEecccccee
Q 017367 216 LLYSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 216 ll~~~-~v~lvl~GH~H~~~ 234 (373)
+.++. +||++|+||+|..-
T Consensus 200 la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 200 IAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred HHhcCCCCCEEEeCCCCccc
Confidence 33333 79999999999854
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.3e-05 Score=61.98 Aligned_cols=66 Identities=17% Similarity=0.241 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCC----------h----HHHHHHHHh-CC-CCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 21 RIAIVGDLGLTYN----------T----TCTINHMSS-NE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 21 r~~~igD~h~~~~----------~----~~~l~~l~~-~~-pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
.+-++||+|.+-. . ..++...++ .+ =|.+.++||++... .
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~------n------------------ 60 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGA------N------------------ 60 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEeccccccc------c------------------
Confidence 5778999997531 1 123333333 24 48999999999421 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
.-..+..+++.| +--...|+||||-.
T Consensus 61 --~~~~a~~IlerL--nGrkhlv~GNhDk~ 86 (186)
T COG4186 61 --RERAAGLILERL--NGRKHLVPGNHDKC 86 (186)
T ss_pred --hhhHHHHHHHHc--CCcEEEeeCCCCCC
Confidence 012456777777 33458999999975
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=5e-06 Score=71.40 Aligned_cols=70 Identities=21% Similarity=0.435 Sum_probs=42.9
Q ss_pred EEEecCCCCCCh--------------HHHHHH----HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 23 AIVGDLGLTYNT--------------TCTINH----MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 23 ~~igD~h~~~~~--------------~~~l~~----l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
+++||+|.+... .+++++ +.+.+||.||++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 478999987421 123333 34579999999999995310 11 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...+.... .+......+|+++++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222222 233335688999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.3e-05 Score=66.95 Aligned_cols=50 Identities=14% Similarity=-0.075 Sum_probs=30.7
Q ss_pred EEEEeCCCCcCCCCCC-c----cchHHHHHHHHHHHHHcCccEEEecccc-ceeee
Q 017367 187 LVATWHPPWYSSYSSH-Y----REAECMRVEMEALLYSYGVDIVFNGHVH-AYERS 236 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~-~----~~~~~~~~~l~~ll~~~~v~lvl~GH~H-~~~r~ 236 (373)
-|+++|.|++...... . .........+.+++++.++.++||||.| .|||-
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 4677777775532100 0 0011123567788888899999999999 55553
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00018 Score=75.17 Aligned_cols=76 Identities=21% Similarity=0.065 Sum_probs=41.4
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEE
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 251 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~y 251 (373)
++.+.+.++.....||++.|........ ...... .. ..+.+. +||++|.||+|..... ..+|+..
T Consensus 234 ~~~v~~Lr~~GaDvIIaLsH~G~~~d~~---~~~~en--a~-~~l~~v~gID~IlgGHsH~~~~~--------~ingv~v 299 (780)
T PRK09418 234 KKMVPKMKAEGADVIVALAHSGVDKSGY---NVGMEN--AS-YYLTEVPGVDAVLMGHSHTEVKD--------VFNGVPV 299 (780)
T ss_pred HHHHHHHHhcCCCEEEEEeccCcccccc---cccchh--hh-HHHhcCCCCCEEEECCCCCcccc--------cCCCEEE
Confidence 3333333334577899999987643211 110111 11 113443 8999999999985432 1235555
Q ss_pred EEeCCCCCccc
Q 017367 252 ITIGDGGNLEK 262 (373)
Q Consensus 252 i~~G~gG~~~~ 262 (373)
+..|.-|...+
T Consensus 300 vqaG~~G~~LG 310 (780)
T PRK09418 300 VMPGVFGSNLG 310 (780)
T ss_pred EEcChhhcEEE
Confidence 66666555544
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.4e-05 Score=72.02 Aligned_cols=70 Identities=17% Similarity=0.306 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+|+++|||+|..... .+.++.+... ..|.|+++||++. .|.. ..+.+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iD------rG~~-------------------s~~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVD------RGKR-------------------SKDVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCC------CCCC-------------------hHHHHHHHHH
Confidence 478999999965432 3455555433 3599999999994 2321 0112222333
Q ss_pred hhhcCCCeEEecCCCCcC
Q 017367 97 NLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~ 114 (373)
.+....++++++||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223356899999999963
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00026 Score=74.29 Aligned_cols=194 Identities=17% Similarity=0.090 Sum_probs=93.0
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------~~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
..+||+..+|+|.... ....|+++.++.+ -++|..||++.+..+.+--..
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~------------ 181 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAI------------ 181 (814)
T ss_pred eEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhh------------
Confidence 3699999999996421 1124555554444 489999999965432100000
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEe---
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNA--- 148 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~--- 148 (373)
....++..-....+.|..+ +.- ..++||||+... .+.+..+.+....|--.. + ..-..|--++.
T Consensus 182 ~~~~~~g~~~P~i~amN~L--GyD-A~tLGNHEFDyG--~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~ 256 (814)
T PRK11907 182 VDPVEEGEQHPMYAALEAL--GFD-AGTLGNHEFNYG--LDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFT 256 (814)
T ss_pred ccccccCcchHHHHHHhcc--CCC-EEEechhhcccC--HHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEe
Confidence 0000000001234455555 332 578999998643 222333322222221110 0 01123333443
Q ss_pred --CC------EEEEEEcccc--cCCC--------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHH
Q 017367 149 --GG------IHFIMLGAYI--SYDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR 210 (373)
Q Consensus 149 --g~------~~fi~ldt~~--~~~~--------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~ 210 (373)
+| +-||++-+.. .+.. -.+-.+-+++...+.++.+.+.||++.|.-.......... +.
T Consensus 257 d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~--En-- 332 (814)
T PRK11907 257 DTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGE--EN-- 332 (814)
T ss_pred cCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccc--cc--
Confidence 33 4556654321 1110 1233344555555554456788999999876432111001 11
Q ss_pred HHHHHHHHHcCccEEEeccccce
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
.-..+.+--+||++|.||+|..
T Consensus 333 -~~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 333 -VGYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred -hhhHHhcCCCCCEEEECCCCCc
Confidence 1112222248999999999984
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00013 Score=80.56 Aligned_cols=58 Identities=24% Similarity=0.264 Sum_probs=34.8
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEecccccee
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~ 234 (373)
+++.+.++++.+...+|++.|........... . .....+|.++. +||++|.||+|...
T Consensus 223 ~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~~--~---en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 223 ANKTIPEMKKGGADVIVALAHSGIESEYQSSG--A---EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCcCCCCCCCC--c---chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 33444444335678899999988654321111 1 12233455444 79999999999864
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.97 E-value=8.8e-05 Score=68.57 Aligned_cols=182 Identities=21% Similarity=0.278 Sum_probs=100.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC---CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN---EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~---~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+||+|-|..|..-+. -+++..+.+. ++|++|++||+-.- .++..-.+ -.....|+.. ..|.+..
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQav----Rn~~D~~s-------iavPpKy~~m-~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAV----RNEQDLKS-------IAVPPKYRRM-GDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhh----cchhhccc-------ccCCHHHHHH-HHHHHHh
Confidence 589999999975432 3456666654 89999999998632 12221110 0122334322 2222222
Q ss_pred -hhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceE-----EEEeCCEEEEEEccc---ccCCCC-
Q 017367 96 -QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYY-----SFNAGGIHFIMLGAY---ISYDKS- 165 (373)
Q Consensus 96 -~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~~~fi~ldt~---~~~~~~- 165 (373)
.++.+.+|.++|=||||.. .|+... |..+ -...+.|| .+.++|+|+-+|... .++..+
T Consensus 69 sge~~APVlTIFIGGNHEAs---------nyL~eL--pyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS---------NYLQEL--PYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHH---------HHHHhc--ccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 3345678889999999973 333321 2110 01234555 477899999999863 222110
Q ss_pred ----------------hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHH-------H----------HHH
Q 017367 166 ----------------GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAEC-------M----------RVE 212 (373)
Q Consensus 166 ----------------~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~-------~----------~~~ 212 (373)
-.+++ -..|.+. +.|.-|++.|.=+.... .++.... + ...
T Consensus 137 ~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~ 209 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPA 209 (456)
T ss_pred CCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChH
Confidence 11111 1123333 34567888885332211 1111110 1 246
Q ss_pred HHHHHHHcCccEEEeccccc
Q 017367 213 MEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 213 l~~ll~~~~v~lvl~GH~H~ 232 (373)
+++||++-++..+|+.|.|.
T Consensus 210 ~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 210 LEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHhCcchhhhhhHhh
Confidence 78899999999999999996
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.4e-05 Score=72.04 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=44.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+++++|||+|..... .++++++. ..+.|.++++||++. .|.. -....+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVd------rGp~--------------------s~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVN------RGPD--------------------SLEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccC------CCcC--------------------HHHHHHHHHh
Confidence 368999999976543 33455543 246899999999994 2321 1123344444
Q ss_pred hhcCCCeEEecCCCCcC
Q 017367 98 LVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~ 114 (373)
+ +.++++|.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 4 45789999999973
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.7e-05 Score=68.12 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=47.3
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 20 KRIAIVGDLGLTYNT--------------TCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~~l~~l~----~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
-+.+++||+|.+... .++++++. +.+||.||++||+.+... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 478999999987421 13454443 358999999999995311 0
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...++.+.++++.+ ..+++.|+||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02344555566555 46999999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00052 Score=66.43 Aligned_cols=89 Identities=16% Similarity=0.331 Sum_probs=57.9
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHH-----hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 18 YPKRIAIVGDLGLTYNT------TCTINHMS-----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~------~~~l~~l~-----~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
..+++++++|.|.+... ...++.|. +.+...++.+||++.+-+.+. |+. .+....+.| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYp-gq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYP-GQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEeccccccccccc-Ccc--------cccccccch-H
Confidence 46899999999986431 23444443 235689999999995432221 221 111222233 2
Q ss_pred HHHHHHHHHhhhhcCCCeEEecCCCCcCCC
Q 017367 87 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 87 ~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
+++.+.+.+..+...+.++..|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 567778888888888999999999998644
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.6e-05 Score=68.80 Aligned_cols=68 Identities=22% Similarity=0.339 Sum_probs=43.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh----------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSS----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 89 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~----------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~ 89 (373)
||+++||+|..... .++++++.- .+.|.++++||++. .|.. ..
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlID------rG~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVD------RGPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccC------CCCC--------------------HH
Confidence 79999999976543 344555421 13689999999994 2321 12
Q ss_pred HHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 90 YWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 90 ~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...+.+..+.....++++.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443334688999999963
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0012 Score=59.94 Aligned_cols=191 Identities=15% Similarity=0.210 Sum_probs=96.8
Q ss_pred EEEEecCCCCCCh------HHHHHHHHh-----------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 22 IAIVGDLGLTYNT------TCTINHMSS-----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 22 ~~~igD~h~~~~~------~~~l~~l~~-----------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
++++||+|.+... +..++.|.- .+..-+|++||.+....-..+.... ............+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~---~~~~~~~~~~~~~ 78 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTK---ARYLTKKSSAASV 78 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhh---hhccccccchhhH
Confidence 7899999987652 122333321 2345799999999542110000000 0000000011112
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCc-ch-hhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc-
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS- 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~-~~-~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~- 161 (373)
...+.+..++..+.+.+|+..+|||||-....-.+ .+ ..+..+-....+ -....+ -|.|+++|++|++.....-
T Consensus 79 -~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtN-P~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 79 -EAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTN-PYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred -HHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCC-CeEEEECCEEEEEECCCCHH
Confidence 34667778888888899999999999976432111 00 011000000000 001122 2569999999999987531
Q ss_pred ----CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 162 ----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 162 ----~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
+.....-++.|++.|+--. - .|.++..-..+. .. .+++-+.-.+++++||.|.|+.
T Consensus 156 Di~ky~~~~~~l~~me~~L~wrH--l---------aPTaPDTL~~yP~~~~-------Dpfvi~~~PhVyf~Gnq~~f~t 217 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWRH--I---------APTAPDTLWCYPFTDR-------DPFILEECPHVYFAGNQPKFGT 217 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhcc--c---------CCCCCCccccccCCCC-------CceeecCCCCEEEeCCCcceee
Confidence 2334455777877776410 0 111111000000 00 0122233589999999999876
Q ss_pred e
Q 017367 236 S 236 (373)
Q Consensus 236 ~ 236 (373)
.
T Consensus 218 ~ 218 (257)
T cd07387 218 K 218 (257)
T ss_pred e
Confidence 4
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00056 Score=70.44 Aligned_cols=54 Identities=26% Similarity=0.204 Sum_probs=30.6
Q ss_pred HHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 174 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 174 ~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
+.+.+.++.....||++.|........... .+. ....+.+. +||++|+||+|..
T Consensus 186 ~~v~~Lr~~gaDvII~LsH~G~~~d~~~~~--~en----~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 186 KYVPEMKAKGADIIVALAHSGISADPYQPG--AEN----SAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred HHHHHHHHcCCCEEEEEeccCcCCCccccc--cch----HHHHHhcCCCCCEEEcCCCCcc
Confidence 333333334577899999987643211100 111 11123443 8999999999984
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00013 Score=65.19 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=27.8
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC-CCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~-~pd~vi~~GDl~y 57 (373)
|+.++||+|..... .++++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 99999999976543 3455555433 6799999999994
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0001 Score=67.01 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh---------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSS---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 89 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~---------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~ 89 (373)
+|+.++||+|..... .+.++++.- ..-|.++++||++. .|.. . .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD------RGp~---------------S-----~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD------RGPH---------------S-----L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC------CCcC---------------h-----H
Confidence 378999999975433 334444321 12479999999994 3431 0 1
Q ss_pred HHHHHHhhhhcCCCeEEecCCCCc
Q 017367 90 YWGRFMQNLVSKVPIMVVEGNHEI 113 (373)
Q Consensus 90 ~~~~~l~~l~~~~P~~~v~GNHD~ 113 (373)
...+.+..+.....++++.||||.
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHH
Confidence 122333333234579999999995
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.026 Score=50.07 Aligned_cols=185 Identities=17% Similarity=0.228 Sum_probs=101.0
Q ss_pred eEEEEEecCCCCCChHH---HHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNTTC---TINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~---~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+|++++||+=....... -+..+.+ .++||||..|-.+-.- .|. .++.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G----~Gi--------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGG----FGI--------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCC----cCC--------------------CHHHHHHHH
Confidence 58999999865444333 3344443 4899999999998421 122 123333333
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchh--hhhcccCCCCCCC-CCCCcceEEEEeCCEEEEEEcc--cccCCC-ChHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFV--AYSSRFAFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYDK-SGHQY 169 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~--~~~~~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt--~~~~~~-~~~Q~ 169 (373)
+ .++- +.++|||=+... +.+. .-..++-.|.+-+ +..+..|.-|...+..+.++|- ...... -..-.
T Consensus 57 ~---~G~d-viT~GNH~wd~~---ei~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF 129 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQK---EILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPF 129 (266)
T ss_pred H---hCCC-EEecccccccch---HHHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHH
Confidence 2 2555 478999987531 1111 1112233344322 2445667778887766655553 222111 12233
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCC
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
+=+++.|...+ .+++.+||-+|.-..+.- .+| -..-+.+|.+|+.=|+|.... ...+-++|+
T Consensus 130 ~~~d~l~~~~~-~~~~~iiVDFHAEtTSEK-----------~a~-g~yldGrvsavvGTHTHV~Ta-----D~rIL~~GT 191 (266)
T COG1692 130 KAADKLLDEIK-LGTDLIIVDFHAETTSEK-----------NAF-GWYLDGRVSAVVGTHTHVPTA-----DERILPKGT 191 (266)
T ss_pred HHHHHHHHhCc-cCCceEEEEccccchhhh-----------hhh-heEEcCeEEEEEeccCccccc-----cceecCCCc
Confidence 44566666654 345679999895432110 111 122244799999999996322 222357889
Q ss_pred EEEE
Q 017367 250 VHIT 253 (373)
Q Consensus 250 ~yi~ 253 (373)
-|++
T Consensus 192 ayiT 195 (266)
T COG1692 192 AYIT 195 (266)
T ss_pred EEEe
Confidence 9986
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00015 Score=64.97 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=41.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHhC--------CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 22 IAIVGDLGLTYNT-TCTINHMSSN--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 22 ~~~igD~h~~~~~-~~~l~~l~~~--------~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
+.+|||+|..... .+.++++... ..|.+|++||++. .|.. -....
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~ID------RGp~--------------------S~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLID------RGPE--------------------IRELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccC------CCCC--------------------HHHHH
Confidence 3689999976543 3345554321 3689999999994 2331 12233
Q ss_pred HHHhhhhcCCCeEEecCCCCcC
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
+.+..+...-.++++.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 4444443334689999999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00012 Score=65.37 Aligned_cols=38 Identities=32% Similarity=0.517 Sum_probs=27.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y 57 (373)
-|++++||+|..... .++++.+. ..+.|.++++||++.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 399999999975433 33444443 246899999999994
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0003 Score=62.43 Aligned_cols=73 Identities=21% Similarity=0.449 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCh--------------HH---HHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 20 KRIAIVGDLGLTYNT--------------TC---TINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~---~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
-+.++++|+|.+... .+ .+++ +.+.+|+-+|++||+-..- +
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~---------------- 78 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----G---------------- 78 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----C----------------
Confidence 588999999987532 12 2332 3457999999999999631 1
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
.....+|+....+++.+... -++++.||||-+
T Consensus 79 ~~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 79 KSLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred ccccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 11234555566666655433 599999999975
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0018 Score=66.98 Aligned_cols=58 Identities=22% Similarity=0.201 Sum_probs=32.5
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
+-+++...+.++.+...||++.|........... .+ .... .+.+. +||++|.||+|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~--ae---n~~~-~l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAM--AE---NSVY-YLSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccc--cc---chhH-HHhcCCCCCEEEeCCCCcc
Confidence 3344444444434578899999987643211000 01 1111 12333 7999999999985
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00021 Score=65.16 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=42.0
Q ss_pred EEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc
Q 017367 23 AIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 100 (373)
Q Consensus 23 ~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~ 100 (373)
.+|||+|..... +++++++.- .+.|.++++||++. .|.. -....+.+..+
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVd------RGp~--------------------s~evl~~l~~l-- 53 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVN------RGPD--------------------SLETLRFVKSL-- 53 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCC------CCcC--------------------HHHHHHHHHhc--
Confidence 589999976543 345555542 36799999999994 2331 12234444444
Q ss_pred CCCeEEecCCCCcC
Q 017367 101 KVPIMVVEGNHEIE 114 (373)
Q Consensus 101 ~~P~~~v~GNHD~~ 114 (373)
+..+..|+||||..
T Consensus 54 ~~~v~~VlGNHD~~ 67 (257)
T cd07422 54 GDSAKTVLGNHDLH 67 (257)
T ss_pred CCCeEEEcCCchHH
Confidence 34788999999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00043 Score=63.63 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=26.4
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC------CCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSN------EPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~------~pd~vi~~GDl~y 57 (373)
++.++||+|..... .++++.|.+. ..+.+|++||++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 78999999976543 3445555422 3568999999994
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00037 Score=63.83 Aligned_cols=65 Identities=25% Similarity=0.417 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
++.+|||+|..... .+.++++. ....|-++++||++. .|.. -....+.+..+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd------RGP~--------------------slevL~~l~~l 55 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA------RGPG--------------------SLEVLRYVKSL 55 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC------CCCC--------------------HHHHHHHHHhc
Confidence 57899999986543 45566664 235799999999994 2321 11233444444
Q ss_pred hcCCCeEEecCCCCc
Q 017367 99 VSKVPIMVVEGNHEI 113 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~ 113 (373)
+..+..|.||||.
T Consensus 56 --~~~~~~VlGNHD~ 68 (279)
T TIGR00668 56 --GDAVRLVLGNHDL 68 (279)
T ss_pred --CCCeEEEEChhHH
Confidence 3346789999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00047 Score=61.62 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=40.4
Q ss_pred EEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc-C
Q 017367 24 IVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-K 101 (373)
Q Consensus 24 ~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~-~ 101 (373)
++||+|..... .++++.+.....|.+|++||++.. |.. .......+..+.. .
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~~ 55 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKILP 55 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCCC
Confidence 79999965432 234444444578999999999942 321 0122233333311 4
Q ss_pred CCeEEecCCCCcC
Q 017367 102 VPIMVVEGNHEIE 114 (373)
Q Consensus 102 ~P~~~v~GNHD~~ 114 (373)
.+++.+.||||..
T Consensus 56 ~~~~~l~GNHe~~ 68 (225)
T cd00144 56 DNVILLRGNHEDM 68 (225)
T ss_pred CcEEEEccCchhh
Confidence 5799999999975
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00089 Score=60.25 Aligned_cols=136 Identities=21% Similarity=0.345 Sum_probs=82.8
Q ss_pred cCCCeEEecCCCCcCCCCCCcc-------hhhhhcccC-------CCCCCC-CCCCcceEEEEeCCEEEEEEcccccCC-
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQT-------FVAYSSRFA-------FPSEES-GSLSSFYYSFNAGGIHFIMLGAYISYD- 163 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~-------~~~~~~~~~-------~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~~~~~- 163 (373)
-.+|+|.-+||||.....-... ...|...+. -|.... -..-..-||+++|+++.+-+-+.....
T Consensus 169 ~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~ 248 (392)
T COG5555 169 MHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAE 248 (392)
T ss_pred eeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccC
Confidence 3689999999999875422211 122222111 111110 122345689999999999887654321
Q ss_pred -CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc----------------chHHHHHHHHHHHHHcCccEEE
Q 017367 164 -KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR----------------EAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 164 -~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~----------------~~~~~~~~l~~ll~~~~v~lvl 226 (373)
...--+-||+.+|........| ++++.|.-.-......++ .....+..|...++.|+|...+
T Consensus 249 ~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~f 327 (392)
T COG5555 249 PGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTF 327 (392)
T ss_pred CCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEec
Confidence 1234578999999987655666 788888653221111110 0112367888899999999999
Q ss_pred eccccceeee
Q 017367 227 NGHVHAYERS 236 (373)
Q Consensus 227 ~GH~H~~~r~ 236 (373)
.||.|.+...
T Consensus 328 hGhkhd~~ma 337 (392)
T COG5555 328 HGHKHDFNMA 337 (392)
T ss_pred ccccccccee
Confidence 9999986443
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.011 Score=53.47 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=70.3
Q ss_pred HHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhh---hcccCCCCCCCCCC---CcceEEEEeCCEEE--EEEcccccC
Q 017367 91 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAY---SSRFAFPSEESGSL---SSFYYSFNAGGIHF--IMLGAYISY 162 (373)
Q Consensus 91 ~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~---~~~~~~p~~~~~~~---~~~~ys~~~g~~~f--i~ldt~~~~ 162 (373)
..+.|..+ ++-++.+.+||++.... +.+... .+.-.++..+.+.. ...+..++.+++++ +.+.+....
T Consensus 69 ~~~~L~~~--G~d~~tlaNNH~fD~G~--~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~ 144 (239)
T cd07381 69 VADALKAA--GFDVVSLANNHTLDYGE--EGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNG 144 (239)
T ss_pred HHHHHHHh--CCCEEEcccccccccch--HHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCC
Confidence 34445544 66766666699986432 222221 12222332211110 13455677888554 444432111
Q ss_pred C----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccc
Q 017367 163 D----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 163 ~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
. ......+-+++.++++++. .+++||+.|-...... ........+...+.+.++|+|+.||.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv 218 (239)
T cd07381 145 IPLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHV 218 (239)
T ss_pred CcCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCc
Confidence 0 1112234456666666543 7789999996542211 1111234455555567899999999998
Q ss_pred eeee
Q 017367 233 YERS 236 (373)
Q Consensus 233 ~~r~ 236 (373)
.+-.
T Consensus 219 ~q~~ 222 (239)
T cd07381 219 LQGI 222 (239)
T ss_pred CCCe
Confidence 7644
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.022 Score=51.52 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=69.0
Q ss_pred HHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhc---ccCCCCCCCCCC---CcceEEEEeCCEEEEEEc--cccc-
Q 017367 91 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIHFIMLG--AYIS- 161 (373)
Q Consensus 91 ~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~---~~~~p~~~~~~~---~~~~ys~~~g~~~fi~ld--t~~~- 161 (373)
..+.|..+ +.-++.+.+||++.... +.+....+ ...++..+.+.. ...+..++.+++++-++. +...
T Consensus 65 ~~~~l~~~--G~d~~~laNNH~fD~G~--~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~ 140 (239)
T smart00854 65 NAAALKAA--GFDVVSLANNHSLDYGE--EGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNN 140 (239)
T ss_pred HHHHHHHh--CCCEEEeccCcccccch--HHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCC
Confidence 44555555 66666666699996432 22222111 112332211111 123556778886654443 2211
Q ss_pred -CC----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccc
Q 017367 162 -YD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 162 -~~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 230 (373)
+. ......+=+++.++++++ +.+++||+.|--...... .. .....+..-+.+.++|+|+.||.
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~----p~-~~~~~~A~~l~~~G~DvIiG~H~ 214 (239)
T smart00854 141 GWAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE----PT-DEQRELAHALIDAGADVVIGHHP 214 (239)
T ss_pred CcccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC----CC-HHHHHHHHHHHHcCCCEEEcCCC
Confidence 10 011113334555555543 468899999966432111 11 12234444454568999999999
Q ss_pred cceeee
Q 017367 231 HAYERS 236 (373)
Q Consensus 231 H~~~r~ 236 (373)
|..+..
T Consensus 215 H~~~~~ 220 (239)
T smart00854 215 HVLQPI 220 (239)
T ss_pred CcCCce
Confidence 987654
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.025 Score=50.98 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=41.4
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
-.||+.++|.|...... .. -..-|+++++||.+. .|. ..+...+.+.+..|
T Consensus 61 ~~r~VcisdtH~~~~~i---~~--~p~gDvlihagdfT~------~g~------------------~~ev~~fn~~~gsl 111 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDI---ND--IPDGDVLIHAGDFTN------LGL------------------PEEVIKFNEWLGSL 111 (305)
T ss_pred ceEEEEecCcccccCcc---cc--CCCCceEEeccCCcc------ccC------------------HHHHHhhhHHhccC
Confidence 47999999999542211 11 246689999999993 233 11223344544444
Q ss_pred hcCCCeEEecCCCCcCCC
Q 017367 99 VSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~ 116 (373)
.-. =-++|.||||...+
T Consensus 112 ph~-yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 112 PHE-YKIVIAGNHELTFD 128 (305)
T ss_pred cce-eeEEEeeccceeec
Confidence 211 23689999998754
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.042 Score=49.36 Aligned_cols=187 Identities=17% Similarity=0.236 Sum_probs=88.8
Q ss_pred EEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 23 AIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 23 ~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+++||+=..... ...|..|.+ .++||||..|..+.. |... ....+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~------G~Gi------------------t~~~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAG------GFGI------------------TPKIAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTT------TSS--------------------HHHHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCC------CCCC------------------CHHHHHHHH---
Confidence 467776322221 234455544 489999999999942 2210 011222222
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhc---ccCCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCCChHHHHHH
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDKSGHQYKWL 172 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~---~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~~~~Q~~WL 172 (373)
..++-+ .+.|||=+.. .+. ..+.. +.-.|.|-+ +..+..|..++.++.++.++|-. ........-+.-+
T Consensus 54 ~~GvDv-iT~GNH~wdk---kei-~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVDV-ITMGNHIWDK---KEI-FDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-SE-EE--TTTTSS---TTH-HHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCCE-EecCcccccC---cHH-HHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 225664 7899998753 122 22222 233344433 35677889999999887777643 2222222344455
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEE
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 252 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi 252 (373)
++.|++.. .+.+.+||=+|.=.. .+ +.-.-.+-+.+|.+|+.=|+|.... ...+-|+|+-||
T Consensus 129 d~~l~~l~-~~~~~iiVDFHAEaT---------SE---K~A~g~~lDGrvsaV~GTHTHVqTa-----DerILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEELK-EETDIIIVDFHAEAT---------SE---KQAMGWYLDGRVSAVVGTHTHVQTA-----DERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S-H---------HH---HHHHHHHHBTTBSEEEEESSSS-BS-------EE-TTS-EEE
T ss_pred HHHHHhcc-ccCCEEEEEeecCcH---------HH---HHHHHHHhCCcEEEEEeCCCCccCc-----hhhccCCCCEEE
Confidence 55555543 456789998884211 11 2222344456899999999996321 222247899998
Q ss_pred E-eCCCCC
Q 017367 253 T-IGDGGN 259 (373)
Q Consensus 253 ~-~G~gG~ 259 (373)
+ +|.-|.
T Consensus 191 TDvGMtG~ 198 (253)
T PF13277_consen 191 TDVGMTGP 198 (253)
T ss_dssp S---EBEE
T ss_pred ecCccccC
Confidence 5 343343
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.022 Score=46.46 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG 258 (373)
+.|.-|-++..||+.++||+|.++.+. .+|-.||..|++-
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaT 136 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSAT 136 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCccc
Confidence 345556667799999999999999884 6788888888753
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.019 Score=56.26 Aligned_cols=41 Identities=32% Similarity=0.445 Sum_probs=31.5
Q ss_pred CeEEEEEecCCCCCCh---------HHHHHHHH----hCCCCEEEEcCcccccc
Q 017367 19 PKRIAIVGDLGLTYNT---------TCTINHMS----SNEPDLVLLVGDVTYAN 59 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~---------~~~l~~l~----~~~pd~vi~~GDl~y~~ 59 (373)
.+||++.+|.|+++.. -.+++.|. +.++|+||..|||++.+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 5999999999988642 23444443 46999999999999754
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0085 Score=56.18 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=25.2
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+++++||+|..... .+.++.+.....+-++++||++.
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 68999999975433 22343332234589999999994
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.098 Score=47.61 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=76.4
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCCcchh---hhhcccCCCCCCCCC---CCcceEEEEeCCEEEEEEcccccC---
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV---AYSSRFAFPSEESGS---LSSFYYSFNAGGIHFIMLGAYISY--- 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~---~~~~~~~~p~~~~~~---~~~~~ys~~~g~~~fi~ldt~~~~--- 162 (373)
.+.|..+ ++-++.+.-||-+.... +.+. ..++...++..+.+. .......++.+++++-++.-....
T Consensus 68 ~~~L~~~--G~d~vslANNH~~D~G~--~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~ 143 (250)
T PF09587_consen 68 LDALKDA--GFDVVSLANNHIFDYGE--EGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGY 143 (250)
T ss_pred HHHHHHc--CCCEEEecCCCCccccH--HHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCC
Confidence 3444444 77788888899775331 2221 122222333222111 112345677888777666532110
Q ss_pred --C------------------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCc
Q 017367 163 --D------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV 222 (373)
Q Consensus 163 --~------------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v 222 (373)
. ....+.+.+.+++++++ ++.+++||+.|.-.-... ......+.+...+.+.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGa 217 (250)
T PF09587_consen 144 SSANGNRPYGFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGA 217 (250)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCC
Confidence 0 01234588888888887 567899999996422111 111233455556666799
Q ss_pred cEEEeccccceeeee
Q 017367 223 DIVFNGHVHAYERSN 237 (373)
Q Consensus 223 ~lvl~GH~H~~~r~~ 237 (373)
|+|+.+|.|..|-..
T Consensus 218 DiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 218 DIIIGHHPHVIQPVE 232 (250)
T ss_pred CEEEeCCCCcccceE
Confidence 999999999876654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.012 Score=55.41 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.=.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.016 Score=53.52 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=26.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
-+++++||+|..... .++++.+.....+-++++||++.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 378999999975433 22444333346688999999994
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.015 Score=53.96 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+++.+.+++.+.++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 46788999999999999999854
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.016 Score=53.98 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=25.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+++++||+|..... .+.++.......+-+|++||++.
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 88 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 88 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEec
Confidence 68999999975432 23444333335578999999994
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.019 Score=53.67 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46788999999999999999854
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.032 Score=53.52 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~ 230 (373)
.+.+.+.|++.+.++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 577889999999999999998
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.34 Score=48.47 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHH-HHHHHHHHc-CccE-EEecccccee
Q 017367 166 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV-EMEALLYSY-GVDI-VFNGHVHAYE 234 (373)
Q Consensus 166 ~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~-~l~~ll~~~-~v~l-vl~GH~H~~~ 234 (373)
-.|.+|-.+.++. ...+.+|+++|.|..... .++ .+.++.+.+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 4567787777766 355679999999974321 112 333344444 6777 9999999744
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.033 Score=51.87 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788999999999999999853
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.04 Score=51.82 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57788999999999999999854
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.076 Score=50.01 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788899999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.1 Score=49.19 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~ 230 (373)
.+++.+.+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.048 Score=48.12 Aligned_cols=83 Identities=12% Similarity=0.279 Sum_probs=42.8
Q ss_pred EEEEecCCCCCCh--HHHHHHH----H-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH---HHHHH
Q 017367 22 IAIVGDLGLTYNT--TCTINHM----S-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP---RWDYW 91 (373)
Q Consensus 22 ~~~igD~h~~~~~--~~~l~~l----~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~---~~~~~ 91 (373)
|+++||.+...+. -+.++.+ . +.+|+.+|++|+++.......... .....+.. ....+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 6899999987432 2233333 3 567999999999996422110000 00001111 12233
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCC
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
.+.+..+...++++.+||+||....
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHhhcccccEEEEeCCCcccccc
Confidence 4445556678999999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=88.20 E-value=2.5 Score=39.04 Aligned_cols=80 Identities=13% Similarity=0.213 Sum_probs=49.9
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHh------------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSS------------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~------------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
..+|+++||.|+.. .+++++|.+ ..|-.+|+.|+++..-.. .+. ...+.|..
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~~------------~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YNR------------NFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CCC------------CchHHHHH
Confidence 47999999999853 333333321 138899999999953110 000 12234665
Q ss_pred HHHHHHH-HHh---hhhcCCCeEEecCCCCcC
Q 017367 87 RWDYWGR-FMQ---NLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~-~l~---~l~~~~P~~~v~GNHD~~ 114 (373)
.++.+.. ++. .+..+.-+++|||-.|-+
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 5666654 233 345678899999999975
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 373 | ||||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-49 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-49 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-49 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 2e-49 |
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 373 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 2e-95 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 7e-93 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 8e-40 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 3e-27 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 1e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 3e-10 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 6e-09 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 7e-07 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-06 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 1e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 290 bits (742), Expect = 2e-95
Identities = 125/375 (33%), Positives = 172/375 (45%), Gaps = 72/375 (19%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHM--SSNEPDLVLLVGDVTYA 58
+ + F T P +G P ++GDLG ++++ T++H S + VL VGD++YA
Sbjct: 102 TTRRFSFITPPQTGLDV-PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYA 160
Query: 59 NLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE---A 115
+ Y + RWD WGRF + V+ P + GNHEIE
Sbjct: 161 DRYPNH-------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 201
Query: 116 QAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 175
+ F +S R+ P E S S S F+YS H I+L +Y +Y + QY WL+K+
Sbjct: 202 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261
Query: 176 LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235
L V RS TPWL+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAYER
Sbjct: 262 LRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYER 321
Query: 236 SNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPY 284
S RV N PV+ITIGD GN
Sbjct: 322 SERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG----------------------- 358
Query: 285 MGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNK 344
QP+YSAFRE+SFGHG+ ++KN T A ++W+RNQD
Sbjct: 359 -------------VIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAV 405
Query: 345 VGDQIYIVRQPDKCP 359
D ++ +
Sbjct: 406 EADSVWFFNRHWYPV 420
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 7e-93
Identities = 125/370 (33%), Positives = 176/370 (47%), Gaps = 72/370 (19%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYA 58
++F T P GP P ++GD+G T+++ T+ H N + VL +GD++Y+
Sbjct: 109 AKRQFWFVTPPKPGP-DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYS 167
Query: 59 NLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE---A 115
N + + RWD WGRF + V+ P + GNHEI+
Sbjct: 168 NRWPNH-------------------DNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD 208
Query: 116 QAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 175
Q FV +++R+ P E SGS +Y+ H I+L +Y + K QYKW +
Sbjct: 209 IGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSE 268
Query: 176 LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235
L V+RS TPWL+ H P Y+SY +HY E E MR E Y VDIVF+GHVH+YER
Sbjct: 269 LEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYER 328
Query: 236 SNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPY 284
S RV N + PV+ITIGDGGN E ++
Sbjct: 329 SERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA-------------------- 368
Query: 285 MGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNK 344
QP YSAFRE+SFGHGI ++KN T A ++WHRNQD +
Sbjct: 369 ----------------SEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASV 412
Query: 345 VGDQIYIVRQ 354
D ++++ +
Sbjct: 413 EADSLWLLNR 422
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 8e-40
Identities = 53/310 (17%), Positives = 91/310 (29%), Gaps = 64/310 (20%)
Query: 17 SYPKRIAIVGDLGLTYNTTCTINH-----------MSSNEPDLVLLVGDVTYANLYLTNG 65
+ R VGD G N + + D +L +GD Y
Sbjct: 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFT------ 57
Query: 66 TGSDCYSCSFSKTPIHETYQPRWD--YWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQT-F 122
+H+ R+ + F + VP V+ GNH+ Q +
Sbjct: 58 -------------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY 104
Query: 123 VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLG-----------------AYISYDKS 165
S R+ FPS F + + ML + +
Sbjct: 105 SKISKRWNFPS--PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA 162
Query: 166 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIV 225
Q W++K LA + +++ H P +S + + C+ ++ LL ++ V
Sbjct: 163 RTQLAWIKKQLAA---AKEDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAY 217
Query: 226 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYM 285
GH H + D G + G G ++ P + +
Sbjct: 218 LCGHDHNLQY-------LQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270
Query: 286 GGFCATNFTS 295
GGF T
Sbjct: 271 GGFAYVEITP 280
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 109 bits (272), Expect = 3e-27
Identities = 44/387 (11%), Positives = 87/387 (22%), Gaps = 117/387 (30%)
Query: 19 PKRIAIVGDLGLTYNTTCTI-----NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC 73
R A +GD G + + ++ G +
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGV------------- 49
Query: 74 SFSKTPIHETYQPRWDYWGRFMQNLVS---KVPIMVVEGNHEIEAQAGNQ---------- 120
P W + + +P V G + Q
Sbjct: 50 -------KGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIE 102
Query: 121 ----------TFVAYSSRFAFPS---------EESGSLSSFYYSFNAGGIHFIML----- 156
++ P+ S S FI +
Sbjct: 103 KNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVL 162
Query: 157 -GAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215
+ + L+ L+ + +++ P YSS + R + + +
Sbjct: 163 SSNFPYKKIHEKAWNDLKSQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLP 219
Query: 216 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCP 275
LL VD+ +GH + E ++ HIT G G + S
Sbjct: 220 LLKDAEVDLYISGHDNNMEV--------IEDNDMAHITCGSGSMSQGKSGM--------- 262
Query: 276 EPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTW 335
+ S F S G + E+ + + +
Sbjct: 263 -------------------------------KNSKSLFFSSDIGFCVHEL-SNNGIVTKF 290
Query: 336 HRNQDSNNKVGDQIYIVRQPDKCPFHG 362
++ +V + + K
Sbjct: 291 VSSKK--GEVIYTHKLNIKKKKTLDKV 315
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 1e-11
Identities = 40/282 (14%), Positives = 81/282 (28%), Gaps = 58/282 (20%)
Query: 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTT---CTINHMSSNEPDLVLLVGDVTY 57
+DV+YF +++ K +A L Y+ + + S + D++++ GD+T
Sbjct: 45 TTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN 104
Query: 58 ANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI---- 113
NG + HE + + + + VV GNH+I
Sbjct: 105 ------NGEKTS-----------HEELAKKLTQVEK------NGTQVFVVPGNHDINNPW 141
Query: 114 -----------EAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN-AGGIHFIMLGAYIS 161
F S F + S S Y + + +ML I
Sbjct: 142 ARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIY 201
Query: 162 YDK------------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM 209
+ W+++ A ++ + H +
Sbjct: 202 KTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINY 261
Query: 210 RVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 251
++ L +D +GH+H + + +
Sbjct: 262 NQQVIDALTEGAMDFSLSGHIHT----QNIRSAKSTDGKEIT 299
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 3e-10
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 43/193 (22%)
Query: 45 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 104
PD ++ GD L + G Y+ F L +
Sbjct: 66 RPDAIVFTGD-------LADK-GEP------------AAYRKLRGLVEPFAAQL--GAEL 103
Query: 105 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 164
+ V GNH+ + + +E+ S++ G+ I+L +
Sbjct: 104 VWVMGNHD-DRAELRKFL----------LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 152
Query: 165 SGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALLY 218
G Q WL ++LA ++A HPP S +R + +L
Sbjct: 153 HGEIRASQLGWLAEELATPAP--DGTILALHHPPIPSV--LDMAVTVELRDQAALGRVLR 208
Query: 219 SYGVDIVFNGHVH 231
V + GH+H
Sbjct: 209 GTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 6e-09
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 46/195 (23%)
Query: 45 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-KVP 103
PD V++ GD + N G E YQ Q L S P
Sbjct: 41 RPDAVVVSGD-------IVN-CGRP------------EEYQ-------VARQILGSLNYP 73
Query: 104 IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD 163
+ ++ GNH+ +A F+ Y + ++ + + + + + +
Sbjct: 74 LYLIPGNHDDKA-----LFLEYLQPL--CPQLGSDANNMRCAVDDFATRLLFIDSSRAGT 126
Query: 164 KSGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALL 217
G WLE L P + HPP + + + AL+
Sbjct: 127 SKGWLTDETISWLEAQLFEGGD--KPATIFMHHPPLPLG--NAQMDPIACENGHRLLALV 182
Query: 218 YSY-GVDIVFNGHVH 231
+ + +F GH H
Sbjct: 183 ERFPSLTRIFCGHNH 197
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 7e-07
Identities = 38/273 (13%), Positives = 64/273 (23%), Gaps = 83/273 (30%)
Query: 36 CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95
+ V+ +GD+ + + M
Sbjct: 42 DAVLQWRRERVQCVVQLGDIIDGH---------------------NRRRDASDRALDTVM 80
Query: 96 QNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSR-----FAFPSEESGSLSSFYYSFNAG 149
L + V + V GNHE + + + S+ G Y A
Sbjct: 81 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140
Query: 150 GIHFIMLGAY----------------------------------------------ISYD 163
F++L AY +
Sbjct: 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGG 200
Query: 164 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG-V 222
S Q +WL+ L D L+ + P ++ + ++L S+ V
Sbjct: 201 FSEQQLQWLDAVLTLSDHKQERVLIFSHLPVH--PCAADPICLAWNHEAVLSVLRSHQSV 258
Query: 223 DIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 255
GH H D G HIT+
Sbjct: 259 LCFIAGHDHDG-------GRCTDSSGAQHITLE 284
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 2e-06
Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 23/227 (10%)
Query: 19 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 77
P+++ + + ++ +PD++++VG++ + ++
Sbjct: 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 64
Query: 78 TPIHETYQPRWDYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 136
IHE + +F + + V VV G ++ + + AY + A+P +
Sbjct: 65 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRA--AYEAETAYP---N 119
Query: 137 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQ---------YKWLEKDLANVDRSVTPWL 187
+ ++ G I G ++ + +++ K + + +
Sbjct: 120 IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR--RLV 177
Query: 188 VATWHPPWYSSY---SSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231
+ PP + V ++ S ++ GHV
Sbjct: 178 TIFYTPPIGEFVDRTPEDPKHHGSAVV--NTIIKSLNPEVAIVGHVG 222
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 1e-04
Identities = 25/221 (11%), Positives = 55/221 (24%), Gaps = 45/221 (20%)
Query: 20 KRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78
+ I + G + D + L+G++ S Y+ F
Sbjct: 6 RYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMP------KAAKSRDYAAFF--- 56
Query: 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGS 138
R + +P V G +A A + P
Sbjct: 57 --------------RILSEA--HLPTAYVPGPQ--DAPIWEYLREAANVELVHP---EMR 95
Query: 139 LSSFYYSFNAGGIHFIMLGAYISYDKSGHQY------KWLEKDLANVDRSVTPW--LVAT 190
++F G +G I+ + ++ W+ + + + +
Sbjct: 96 NVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLF 155
Query: 191 WHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231
P Y + E+ L+ ++ +V
Sbjct: 156 HTMP-YHKGLNEQGSH-----EVAHLIKTHNPLLVLVAGKG 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.96 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.93 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.92 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.88 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.69 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.68 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.63 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.57 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.55 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.53 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.53 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.51 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.5 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.47 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.43 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.39 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.38 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.37 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.37 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.32 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.27 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.25 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.25 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.09 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.9 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.9 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.9 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.8 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.79 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.76 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.73 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.68 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.68 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.5 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.44 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.36 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.31 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.29 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.15 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.59 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.58 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.45 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.22 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.06 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.06 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.84 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.83 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.8 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.76 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.75 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.48 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 92.6 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-52 Score=404.79 Aligned_cols=298 Identities=42% Similarity=0.794 Sum_probs=247.0
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
+|++++|+|+|.+++. .++||+++||+|.......+++++.+. +|||||++||++|.+....
T Consensus 109 ~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~--------------- 172 (426)
T 1xzw_A 109 AKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN--------------- 172 (426)
T ss_dssp GCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGG---------------
T ss_pred ccceeEEECCCCCCCC-CCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCc---------------
Confidence 4789999999987654 479999999999865556778888876 8999999999998643210
Q ss_pred CCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCC---CCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEE
Q 017367 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIM 155 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ 155 (373)
....+|+.|.+.++++.+.+|+++++||||+.... ....+..|..+|.||.+..+..++.||+|++|+++||+
T Consensus 173 ----~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~ 248 (426)
T 1xzw_A 173 ----HDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIV 248 (426)
T ss_dssp ----GCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEE
T ss_pred ----ccchHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEE
Confidence 11356888888899987899999999999997532 12356778889999976555567889999999999999
Q ss_pred EcccccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 156 LGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 156 ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
||++..+....+|++||+++|+++++++.+|+||++|+|+++....+......+++.|+++|.+++|+++|+||+|.|+|
T Consensus 249 Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r 328 (426)
T 1xzw_A 249 LSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYER 328 (426)
T ss_dssp CCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEE
T ss_pred eeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhhee
Confidence 99987777789999999999999876778999999999999865434344556789999999999999999999999999
Q ss_pred eeecccCc-----------cCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccc
Q 017367 236 SNRVFNYT-----------LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCW 304 (373)
Q Consensus 236 ~~p~~~~~-----------~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.+|+++.. .+++|++||++|+||+.++... .+ .
T Consensus 329 ~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~--------------------------~~----------~ 372 (426)
T 1xzw_A 329 SERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLAS--------------------------EM----------T 372 (426)
T ss_dssp ECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCC--------------------------CB----------C
T ss_pred eeeecCccccccCCccccccCCCccEEEEeCCCcccccccc--------------------------cc----------C
Confidence 99987755 2468999999999999764321 01 0
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeC
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 354 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~ 354 (373)
.++|+|++|+...|||++|+|.|+|+|.|+|++++|++..|.|+|||+|.
T Consensus 373 ~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 373 QPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred CCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 35789999999999999999999999999999998885569999999997
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-50 Score=391.23 Aligned_cols=299 Identities=42% Similarity=0.781 Sum_probs=241.6
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
+|++++|+|+|.+++. .++||+++||+|.......+++.+.+. +|||||++||++|.+.+..
T Consensus 102 ~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~--------------- 165 (424)
T 2qfp_A 102 TTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPN--------------- 165 (424)
T ss_dssp SCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGG---------------
T ss_pred ccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCcccccccccc---------------
Confidence 4789999999987654 479999999999876555678888775 8999999999998643210
Q ss_pred CCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCC---CCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEE
Q 017367 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIM 155 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ 155 (373)
.....|+.|.+.++++.+.+|+++++||||+.... ....+..|..+|.||........+.||+|++|+++||+
T Consensus 166 ----~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~ 241 (424)
T 2qfp_A 166 ----HDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIV 241 (424)
T ss_dssp ----GCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEE
T ss_pred ----ccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEE
Confidence 01346888888898887789999999999987431 11246778888999876544567889999999999999
Q ss_pred EcccccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 156 LGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 156 ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
||+...+....+|++||+++|+++++++.+|+||++|+|+++....++.....+++.|+++|.+++|+++|+||+|.|+|
T Consensus 242 Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r 321 (424)
T 2qfp_A 242 LSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYER 321 (424)
T ss_dssp CCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEE
T ss_pred ecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhhe
Confidence 99987666667999999999999876677899999999999865444434456788999999999999999999999999
Q ss_pred eeecccCc-----------cCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccc
Q 017367 236 SNRVFNYT-----------LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCW 304 (373)
Q Consensus 236 ~~p~~~~~-----------~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.+|+++.. .+++|++||++|+||+.++... .+.
T Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~--------------------------~~~---------- 365 (424)
T 2qfp_A 322 SERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDS--------------------------NMI---------- 365 (424)
T ss_dssp ECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCC--------------------------CBC----------
T ss_pred eccccCcceeccCCccccccCCCCcEEEEecCCCCccccCc--------------------------cCC----------
Confidence 99886532 1467899999999999764321 010
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCC
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQP 355 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~ 355 (373)
.++|+|++|+...|||++|+|.|+|++.|+|+++.||...+.|+|||.|..
T Consensus 366 ~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 366 QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 357889999999999999999999999999999888833346999999973
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=293.83 Aligned_cols=255 Identities=18% Similarity=0.248 Sum_probs=184.2
Q ss_pred CeEEEEEecCCCCCChHH----HH-HHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH-HH
Q 017367 19 PKRIAIVGDLGLTYNTTC----TI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 92 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~----~l-~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~-~~ 92 (373)
++||+++||+|.+...+. .| +.+.+.+|||||++||++|. |.. .....+|.. |.
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~------G~~--------------~~~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID------GVK--------------GLNDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT------CCC--------------STTCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC------CCC--------------cCccHHHHHHHH
Confidence 599999999998654332 22 23345799999999999984 220 001223432 33
Q ss_pred HHHhhh--hcCCCeEEecCCCCcCCCCCCc-ch-------------------hhhhcccCCCCCCCCCCCcceEEE----
Q 017367 93 RFMQNL--VSKVPIMVVEGNHEIEAQAGNQ-TF-------------------VAYSSRFAFPSEESGSLSSFYYSF---- 146 (373)
Q Consensus 93 ~~l~~l--~~~~P~~~v~GNHD~~~~~~~~-~~-------------------~~~~~~~~~p~~~~~~~~~~~ys~---- 146 (373)
++++.+ ..++||++|+||||+..+...+ .+ .....+|.||. .||++
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 443332 3479999999999997642211 11 11345676764 57765
Q ss_pred Ee---------C----CEEEEEEcccccCC----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc
Q 017367 147 NA---------G----GIHFIMLGAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 203 (373)
Q Consensus 147 ~~---------g----~~~fi~ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~ 203 (373)
.. | .++||+|||..... ...+|++||+++|+. .+|+||++|+|+++....
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~-- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS-- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--
Confidence 32 2 39999999974321 125899999999943 379999999999987532
Q ss_pred cchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCC
Q 017367 204 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDP 283 (373)
Q Consensus 204 ~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (373)
.....+++.|.++|.+++|+++|+||.|.+++..+ +|+.||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 23356788999999999999999999999999863 579999999988753210
Q ss_pred CCCCccccccccCCCCCCcccCCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCCCC
Q 017367 284 YMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 359 (373)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~~~ 359 (373)
...++|++|+...+||.++++ +++.|.++|+.+.+| +++|+|+|.|...+..
T Consensus 261 ---------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G--~vld~~~i~k~~~~~~ 312 (342)
T 3tgh_A 261 ---------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG--EVIYTHKLNIKKKKTL 312 (342)
T ss_dssp ---------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT--EEEEEEEEECCCCSSC
T ss_pred ---------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC--cEEEEEEEECCCCccc
Confidence 023468899989999999999 778999999976677 9999999999876543
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=254.53 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=172.1
Q ss_pred CeEEEEEecCCCCCC-------h---HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHH
Q 017367 19 PKRIAIVGDLGLTYN-------T---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 87 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-------~---~~~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 87 (373)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++..+.+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998642 1 223333 3456999999999999854221100 112
Q ss_pred HHHHHHHHhhh----hc-CCCeEEecCCCCcCCCCCCc-chhhhhcccCCCCCCCCCCCcceEEEEe------CCEEEEE
Q 017367 88 WDYWGRFMQNL----VS-KVPIMVVEGNHEIEAQAGNQ-TFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIM 155 (373)
Q Consensus 88 ~~~~~~~l~~l----~~-~~P~~~v~GNHD~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~~~fi~ 155 (373)
+.+.++.+ .. ++|+++++||||........ .+.....+|.+| ..||++.+ ++++||+
T Consensus 67 ---~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~ 135 (313)
T 1ute_A 67 ---FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFM 135 (313)
T ss_dssp ---HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEE
T ss_pred ---HHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEE
Confidence 22333322 12 78999999999986431110 111222344343 35888887 4899999
Q ss_pred EcccccC-----------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHH
Q 017367 156 LGAYISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 218 (373)
Q Consensus 156 ldt~~~~-----------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~ 218 (373)
||+.... ....+|++||++.|++.. .+|+|+++|+|++..... .....+++.|.+++.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~ 210 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLT 210 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHH
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHH
Confidence 9986411 124799999999999864 368999999999875432 223356788999999
Q ss_pred HcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q 017367 219 SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPA 298 (373)
Q Consensus 219 ~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
+++|+++|+||+|.+++.. ..+|+.||++|++|...+... +..
T Consensus 211 ~~~v~~~l~GH~H~~~~~~-------~~~g~~~i~~gs~~~~~~~~~-~~~----------------------------- 253 (313)
T 1ute_A 211 THKVTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKK-HLR----------------------------- 253 (313)
T ss_dssp HTTCSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCCCCCT-TGG-----------------------------
T ss_pred HcCCcEEEECChhhhhhcc-------CCCCceEEEECCCcCcCcccc-ccc-----------------------------
Confidence 9999999999999999885 256899999999886432110 000
Q ss_pred CCCcccCCCCCcccccc----CCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCC
Q 017367 299 AGKFCWDRQPDYSAFRE----SSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQP 355 (373)
Q Consensus 299 ~~~~~~~~~~~~~~~~~----~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~ 355 (373)
....++..|.. ..+||++|+| +++.+.++|+.. +| +++|+|+|.|..
T Consensus 254 ------~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g--~~~~~~~l~~~~ 304 (313)
T 1ute_A 254 ------KVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPRRA 304 (313)
T ss_dssp ------GSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECCCC
T ss_pred ------cCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC--cEEEEEEecccc
Confidence 00012333322 2379999999 677899999875 55 899999998873
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=243.28 Aligned_cols=235 Identities=22% Similarity=0.259 Sum_probs=158.6
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCC-CCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSF-SKTP 79 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~-~~~~ 79 (373)
+|.+++|+|+|.+++...++||+++||.+.......++..|.+.+|||||++||++|.+.....+......+... ....
T Consensus 98 ~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~ 177 (527)
T 2yeq_A 98 LSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEII 177 (527)
T ss_dssp ECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCC
T ss_pred cCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccccccCCccccc
Confidence 378899999998765445899999999986433345677888889999999999999865321110000000000 0011
Q ss_pred CcccchHHHHHHH--HHHhhhhcCCCeEEecCCCCcCCCCCCcc---------h-----hhhhccc-CCCCCC----CCC
Q 017367 80 IHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGNQT---------F-----VAYSSRF-AFPSEE----SGS 138 (373)
Q Consensus 80 ~~~~y~~~~~~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~~~---------~-----~~~~~~~-~~p~~~----~~~ 138 (373)
..+.|+..|..+. ..++.+.+.+|+++++||||+..+..... | ..++..| .||... .+.
T Consensus 178 tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~ 257 (527)
T 2yeq_A 178 TLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGP 257 (527)
T ss_dssp SHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTT
T ss_pred CHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 1223444444433 23566777899999999999986532210 1 1222222 244321 123
Q ss_pred CCcceEEEEeCC-EEEEEEcccccCC----------------------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCC
Q 017367 139 LSSFYYSFNAGG-IHFIMLGAYISYD----------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 195 (373)
Q Consensus 139 ~~~~~ys~~~g~-~~fi~ldt~~~~~----------------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~ 195 (373)
....||+|++|+ ++||+|||..... .+.+|++||++.|++ ++++|+||+.|+|+
T Consensus 258 ~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~ 334 (527)
T 2yeq_A 258 DMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF 334 (527)
T ss_dssp BCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC
T ss_pred CceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc
Confidence 456899999999 9999999964211 368999999999998 35689999999999
Q ss_pred cCCCC----------CCccchHHHHHHHHHHHHHcCc--cEEEeccccceeeeee
Q 017367 196 YSSYS----------SHYREAECMRVEMEALLYSYGV--DIVFNGHVHAYERSNR 238 (373)
Q Consensus 196 ~~~~~----------~~~~~~~~~~~~l~~ll~~~~v--~lvl~GH~H~~~r~~p 238 (373)
+.... ..+......+++|+++|.+++| .++|+||+|.+++...
T Consensus 335 ~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 335 AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred cccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 86432 1122334568999999999988 4999999999999853
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-26 Score=213.01 Aligned_cols=213 Identities=15% Similarity=0.181 Sum_probs=139.2
Q ss_pred CCceEEEeCCCCCCCCCCeEEEEEecCCCCCC-------------hHHHHHHHHh--CCCCEEEEcCccccccccccCCC
Q 017367 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN-------------TTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGT 66 (373)
Q Consensus 2 s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~-------------~~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~ 66 (373)
|+.|.+.+.+.+.....++||+++||+|.... ..++++.+.+ .++|+||++||+++. |.
T Consensus 8 ~~~~~~~~l~~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~ 81 (330)
T 3ib7_A 8 SKAYVEHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE 81 (330)
T ss_dssp --------CEECSSCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC
T ss_pred cchhhhhhcccccCCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC
Confidence 34444444333322334799999999997421 2345666666 799999999999952 22
Q ss_pred CCCccccCCCCCCCcccchHHHHHHHHHHhhhh--cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceE
Q 017367 67 GSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYY 144 (373)
Q Consensus 67 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y 144 (373)
...+..+.+.++.+. .++|+++++||||.. ..+....... + ......+|
T Consensus 82 ------------------~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~--~----~~~~~~~~ 132 (330)
T 3ib7_A 82 ------------------PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLDE--A----PSMAPLDR 132 (330)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHHHCC--C----CCCSCCCE
T ss_pred ------------------HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH-----HHHHHHhccc--c----cccCCcce
Confidence 234555666666652 278999999999973 1222211111 1 12345789
Q ss_pred EEEeCCEEEEEEccccc----CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHH
Q 017367 145 SFNAGGIHFIMLGAYIS----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYS 219 (373)
Q Consensus 145 s~~~g~~~fi~ldt~~~----~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~ 219 (373)
+++.++++|++||+... .....+|++||++.|+..... + .|+++|+|++......... ....++.|.+++++
T Consensus 133 ~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~~--~-~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~ 209 (330)
T 3ib7_A 133 VCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPD--G-TILALHHPPIPSVLDMAVTVELRDQAALGRVLRG 209 (330)
T ss_dssp EEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTT--C-EEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTT
T ss_pred EEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHHhcccC--C-eEEEEECCCCCCCccccccccccCHHHHHHHHhc
Confidence 99999999999999753 235789999999999987532 2 5666677766543211110 11125778899999
Q ss_pred cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCc
Q 017367 220 YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~ 260 (373)
++++++|+||+|..+... .+|+.+++.|+.+..
T Consensus 210 ~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 210 TDVRAILAGHLHYSTNAT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp SSEEEEEECSSSSCEEEE--------ETTEEEEECCCSSCE
T ss_pred cCceEEEECCCCCcccce--------ECCEEEEecCcceec
Confidence 999999999999987653 358888888887753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=203.58 Aligned_cols=206 Identities=18% Similarity=0.159 Sum_probs=133.6
Q ss_pred CeEEEEEecCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 19 PKRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 19 ~~r~~~igD~h~~~~--------------------~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
++||+++||+|.... ..++++.+.+.+||+||++||+++.....
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~---------------- 68 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR---------------- 68 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH----------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc----------------
Confidence 699999999997652 12445556668999999999999632100
Q ss_pred CCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC--------CCCCCcceEEEEe-C
Q 017367 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE--------SGSLSSFYYSFNA-G 149 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~--------~~~~~~~~ys~~~-g 149 (373)
.......++.+.+.++.+ ++|+++++||||..... ...+.+.+..+... -...+..||+++. +
T Consensus 69 --~~~~~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 140 (322)
T 2nxf_A 69 --RDASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140 (322)
T ss_dssp --TTCHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEET
T ss_pred --chHHHHHHHHHHHHHHhc--CCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecCC
Confidence 000012233334444443 78999999999984211 11222222211000 0002457899998 9
Q ss_pred CEEEEEEccccc----------------------------------------------CCCChHHHHHHHHHHhhccCCC
Q 017367 150 GIHFIMLGAYIS----------------------------------------------YDKSGHQYKWLEKDLANVDRSV 183 (373)
Q Consensus 150 ~~~fi~ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~ 183 (373)
+++||+||+... .....+|++||++.|+++.+..
T Consensus 141 ~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~ 220 (322)
T 2nxf_A 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 220 (322)
T ss_dssp TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcC
Confidence 999999998642 1134899999999999875322
Q ss_pred CCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 184 TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 184 ~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
.++||++|+|++....... ......+.+.+++.++ +|+++|+||+|.+++.. ..+|+.|+++|+.
T Consensus 221 -~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 221 -ERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -CEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 3478899999986543210 0111256788999999 79999999999998874 2467888877654
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-24 Score=194.24 Aligned_cols=192 Identities=15% Similarity=0.201 Sum_probs=129.5
Q ss_pred eEEEEEecCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 20 KRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 20 ~r~~~igD~h~~~---------~----~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
+||+++||+|... . ..++++.+.+. ++|+||++||+++. +.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 5899999999874 1 13455566554 68999999999952 22
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhccc-CCCCCCCCCC-CcceEEEEeCCEEEEEEccccc-
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF-AFPSEESGSL-SSFYYSFNAGGIHFIMLGAYIS- 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~-~~p~~~~~~~-~~~~ys~~~g~~~fi~ldt~~~- 161 (373)
...++.+.+.++.+ ++|+++++||||.... ....+...| ..+. . +..+|+++.++++|++||+...
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKAL----FLEYLQPLCPQLGS-----DANNMRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHH----HHHHHGGGSGGGCS-----CGGGCCEEECSSSSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHH----HHHHhhhhhcCccc-----CCCceEEEEEeCCEEEEEEeCCCCC
Confidence 23455566666666 7899999999998421 001111111 1111 1 3467899999999999999743
Q ss_pred ---CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeee
Q 017367 162 ---YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERS 236 (373)
Q Consensus 162 ---~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~ 236 (373)
.....+|++||++.|++.. ..++|+++|+|++......... .....+.+.++++++ +|+++|+||+|..+..
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred CCCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 2357899999999999863 2358899999987653221110 011246788999998 8999999999998775
Q ss_pred eecccCccCCCCCEEEEeCCC
Q 017367 237 NRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~g 257 (373)
. .+|+.++++++.
T Consensus 203 ~--------~~g~~~~~~pg~ 215 (274)
T 3d03_A 203 Q--------YRQALISTLPGT 215 (274)
T ss_dssp E--------ETTEEEEECCCS
T ss_pred e--------ECCEEEEEcCCc
Confidence 3 246555555443
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-21 Score=186.66 Aligned_cols=194 Identities=15% Similarity=0.236 Sum_probs=123.9
Q ss_pred CCeEEEEEecCCCCCC-----------------------hH----HHHHHHHhCCCCEEEEcCccccccccccCCCCCCc
Q 017367 18 YPKRIAIVGDLGLTYN-----------------------TT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDC 70 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------------~~----~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~ 70 (373)
.++||+++||+|.... .. ++++.+.+.+||+||++||+++. +.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 4699999999997532 12 34445556789999999999952 22
Q ss_pred cccCCCCCCCcccchHHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCc------------chhhhhcccCCCCCCC-
Q 017367 71 YSCSFSKTPIHETYQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQ------------TFVAYSSRFAFPSEES- 136 (373)
Q Consensus 71 ~~~~~~~~~~~~~y~~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~------------~~~~~~~~~~~p~~~~- 136 (373)
...++.+.+.++.+. .++|+++++||||........ ....|...|.......
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123445556666653 378999999999986421100 0112222232100000
Q ss_pred ---CCCCcceEEEEeCCEEEEEEccccc------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCC
Q 017367 137 ---GSLSSFYYSFNAGGIHFIMLGAYIS------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS 201 (373)
Q Consensus 137 ---~~~~~~~ys~~~g~~~fi~ldt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~ 201 (373)
......|+.+..++++||+||+... .....+|++||++.|+.+.+.. ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 0012233444578999999999742 2357899999999999875433 34788889998765322
Q ss_pred Cccc-hHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 202 HYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 202 ~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
.... .....+.+.+++++++|+++|+||+|..+..
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1110 1113577889999999999999999987664
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=143.48 Aligned_cols=217 Identities=12% Similarity=0.213 Sum_probs=109.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHH----HHHHHH
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR----WDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~----~~~~~~ 93 (373)
++||+++||+|..... .++++.+.+.++|+||++||++.......... ..+. ....+..+.++.. .+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~-~~~~---~~~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYE-RAHL---ARREPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHH-HHHH---TTCCCCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhh-hhhh---hhcccchhhhhHHHHHHHHHHHH
Confidence 5899999999987543 45666666679999999999994210000000 0000 0000000111100 022444
Q ss_pred HHhhhhc-CCCeEEecCCCCcCCCCCCcchhhhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcccccC-CCChHHHH
Q 017367 94 FMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DKSGHQYK 170 (373)
Q Consensus 94 ~l~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~-~~~~~Q~~ 170 (373)
.++.+.. ++|+++|+||||.... ..+........ .+... .... ...+.+++++|++++..... ....+++.
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAETAYPNIR--VLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFVL 154 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTTTCTTEE--ECSS-EEEEETTTEEEEEECSEEESSCCBSSSSC
T ss_pred HHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhccCCcceE--EecC-cceEEECCEEEEecCCCcCCCCcCHHHHh
Confidence 5555533 6899999999997421 00011111110 00000 0011 12377889999999864311 11222222
Q ss_pred ----HHH----HHHhhccCCCCCeEEEEeCCCCcCCCCCCc--cchHHHHHHHHHHHHHcCccEEEeccccceeeeeecc
Q 017367 171 ----WLE----KDLANVDRSVTPWLVATWHPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240 (373)
Q Consensus 171 ----WL~----~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~--~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~ 240 (373)
|+. +.|++.. . ...|++.|+|++....... .........+.+++.+++++++++||+|. ....
T Consensus 155 ~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H~-~~~~--- 227 (260)
T 2yvt_A 155 KYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGK-GHEL--- 227 (260)
T ss_dssp EEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCC-EEEE---
T ss_pred hcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCccC-CcEE---
Confidence 443 3333322 2 2358888888764311110 00000124567788888999999999993 2221
Q ss_pred cCccCCCCCEEEEeCCC
Q 017367 241 NYTLDPCGPVHITIGDG 257 (373)
Q Consensus 241 ~~~~~~~g~~yi~~G~g 257 (373)
-++++++..|+.
T Consensus 228 -----~~~~~~in~Gs~ 239 (260)
T 2yvt_A 228 -----VGNTIVVNPGEF 239 (260)
T ss_dssp -----ETTEEEEECCBG
T ss_pred -----eCCEEEEeCCCC
Confidence 235666666654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.7e-16 Score=139.51 Aligned_cols=187 Identities=11% Similarity=0.052 Sum_probs=105.9
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
++||+++||+|..... .++++.+.+.++|+||++||++.. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986432 334455555589999999999942 210 1222334444444
Q ss_pred hhcCCCeEEecCCCCcCCCCCCcchhhhhccc----CCCCCCCCCCCcceEEEEeC-CEEEEEEccccc--CCCChHHH-
Q 017367 98 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF----AFPSEESGSLSSFYYSFNAG-GIHFIMLGAYIS--YDKSGHQY- 169 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~ys~~~g-~~~fi~ldt~~~--~~~~~~Q~- 169 (373)
+ ++|+++|+||||.... ..+...+ ..|... .... ..+.++ +++|+++++... +....+++
T Consensus 62 ~--~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 129 (228)
T 1uf3_A 62 A--HLPTAYVPGPQDAPIW------EYLREAANVELVHPEMR--NVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEAL 129 (228)
T ss_dssp G--CSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEE--ECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSC
T ss_pred c--CCcEEEECCCCCchhH------HHHHhhhhhhccCcceE--Eccc--ceEeeCCCcEEecCCCCcCCCCccChhhcc
Confidence 3 6899999999998421 1111111 001000 0011 134556 899999975321 11122222
Q ss_pred -------HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccC
Q 017367 170 -------KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 242 (373)
Q Consensus 170 -------~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~ 242 (373)
+|+++.|++... ...|++.|+|++...... .. ...+.+++++++++++++||+|.....
T Consensus 130 ~~~~~~~~~~~~~l~~~~~---~~~il~~H~p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~GH~H~~~~~------ 195 (228)
T 1uf3_A 130 RYPAWVAEYRLKALWELKD---YPKIFLFHTMPYHKGLNE-QG----SHEVAHLIKTHNPLLVLVAGKGQKHEM------ 195 (228)
T ss_dssp EEEHHHHHHHHGGGGGSCS---CCEEEEESSCBCBTTTBT-TS----BHHHHHHHHHHCCSEEEECCSSCEEEE------
T ss_pred cchhhhHHHHHHHHHhCCC---CCeEEEEccCcccCCccc-cC----HHHHHHHHHHhCCCEEEEcccccCccc------
Confidence 344445555432 247888899886531111 11 135667788889999999999933211
Q ss_pred ccCCCCCEEEEeCCC
Q 017367 243 TLDPCGPVHITIGDG 257 (373)
Q Consensus 243 ~~~~~g~~yi~~G~g 257 (373)
.++++++..|+.
T Consensus 196 ---~~~~~~in~Gs~ 207 (228)
T 1uf3_A 196 ---LGASWVVVPGDL 207 (228)
T ss_dssp ---ETTEEEEECCBG
T ss_pred ---cCCceEEEeccc
Confidence 245666666654
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.4e-16 Score=144.78 Aligned_cols=188 Identities=14% Similarity=0.113 Sum_probs=96.8
Q ss_pred CeEEEEEecCCCC----CC-------------hHHHHHHHHhCCCCEEEEcCc-cccccccccCCCCCCccccCCCCCCC
Q 017367 19 PKRIAIVGDLGLT----YN-------------TTCTINHMSSNEPDLVLLVGD-VTYANLYLTNGTGSDCYSCSFSKTPI 80 (373)
Q Consensus 19 ~~r~~~igD~h~~----~~-------------~~~~l~~l~~~~pd~vi~~GD-l~y~~~~~~~g~~~~~~~~~~~~~~~ 80 (373)
++||+++||+|.+ .. ..++++.+.+.++|+||++|| ++.. +.. .
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~~------------~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NNP------------S 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SCC------------C
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CCC------------C
Confidence 6999999999976 21 123444455679999999999 6631 210 0
Q ss_pred cccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcc----cCCCCCCCCCCCcceEEEEeCCEEEEEE
Q 017367 81 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR----FAFPSEESGSLSSFYYSFNAGGIHFIML 156 (373)
Q Consensus 81 ~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~ys~~~g~~~fi~l 156 (373)
......+.+.++.+...+|+++++||||... ...+..+... +.+..+.. ....+.+..+++.|+++
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEEC
Confidence 1123345666666632289999999999853 1122222221 11111000 00001112356888888
Q ss_pred cccccC-------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHH-HHHHHHHHHHcCccEEEec
Q 017367 157 GAYISY-------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM-RVEMEALLYSYGVDIVFNG 228 (373)
Q Consensus 157 dt~~~~-------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~-~~~l~~ll~~~~v~lvl~G 228 (373)
+..... ....+|++|+.+.|.........+.|+++|.|+....... ..... ...+...+.+.+++++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~--~~~~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA--GIEQGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC--CccchhhcccCHHHccccCCEEEEc
Confidence 643221 1124678898888865310123468999999986432110 00000 0001112334589999999
Q ss_pred cccceeee
Q 017367 229 HVHAYERS 236 (373)
Q Consensus 229 H~H~~~r~ 236 (373)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99998765
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-13 Score=122.02 Aligned_cols=143 Identities=16% Similarity=0.319 Sum_probs=84.9
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHH-HhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN---TTCTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 19 ~~r~~~igD~h~~~~---~~~~l~~l-~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.+||+++||+|.... ..+.+.++ .+.++|+||++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 489999999997642 22344444 45689999999999821 12334
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHH
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 174 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~ 174 (373)
++.+ ..|+++|+||||....... ..+... +| ....+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~~--lp---------~~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNGV--FP---------EYVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTBC--CC---------SEEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHhh--CC---------ceEEE----------------------------
Confidence 4444 4689999999997532100 000000 00 00000
Q ss_pred HHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEe
Q 017367 175 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 254 (373)
Q Consensus 175 ~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~ 254 (373)
+. ....|++.|.+++.... . .+.+.+++++.+++++++||+|...... .+++.++..
T Consensus 110 ---~~----~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inp 166 (215)
T 2a22_A 110 ---QI----GEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNP 166 (215)
T ss_dssp ---EE----TTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEEC
T ss_pred ---ec----CCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEEC
Confidence 00 12357777754432211 1 2356667777899999999999865431 357888888
Q ss_pred CCCCC
Q 017367 255 GDGGN 259 (373)
Q Consensus 255 G~gG~ 259 (373)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 87654
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.7e-13 Score=115.43 Aligned_cols=178 Identities=12% Similarity=0.190 Sum_probs=107.3
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHH-HhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN---TTCTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 19 ~~r~~~igD~h~~~~---~~~~l~~l-~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.+||+++||+|.... ..+.+.++ .+.++|+|+++||++.. ...+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~-------------------------------~~~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH-------------------------------HHHHH
Confidence 479999999997532 22333333 34579999999999821 12333
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHH
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 174 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~ 174 (373)
++.+ ..|+++|+||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 4444 468999999999742 1121 111111
Q ss_pred HHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEe
Q 017367 175 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 254 (373)
Q Consensus 175 ~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~ 254 (373)
..+.|++.|.+++.... . .+.+.+++++.+++++++||+|...... .+++.++..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEEC
Confidence 12356777744432211 1 2446667777899999999999865432 357888888
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeEEEEEecCCeEEEE
Q 017367 255 GDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWT 334 (373)
Q Consensus 255 G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~ 334 (373)
|+.+...... . .....+|+++++. +..+.++
T Consensus 143 GS~~~~~~~~----------------------------------------~--------~~~~~~y~il~~~-~~~~~~~ 173 (192)
T 1z2w_A 143 GSATGAYNAL----------------------------------------E--------TNIIPSFVLMDIQ-ASTVVTY 173 (192)
T ss_dssp CCTTCCCCSS----------------------------------------C--------SCCCCEEEEEEEE-TTEEEEE
T ss_pred CcccccCCCC----------------------------------------C--------cCCCCcEEEEEEE-CCEEEEE
Confidence 8765421000 0 0112489999995 4568888
Q ss_pred EEEecCCCceeeEEEEEEe
Q 017367 335 WHRNQDSNNKVGDQIYIVR 353 (373)
Q Consensus 335 ~~~~~~~~~~v~d~~~i~k 353 (373)
++.-+.+ ...+.++.+.|
T Consensus 174 ~~~~~~~-~~~v~~~~~~~ 191 (192)
T 1z2w_A 174 VYQLIGD-DVKVERIEYKK 191 (192)
T ss_dssp EEEEETT-EEEEEEEEEEC
T ss_pred EEEccCC-EEEEEEEEEcc
Confidence 8876554 34466666554
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-14 Score=129.83 Aligned_cols=186 Identities=9% Similarity=-0.007 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH---hC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMS---SN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~---~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
+||+++||+|..... .++++.+. +. ++|+||++||++.. |.. . ....+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~-----------------~---~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY-----------------P---KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC-----------------H---HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC-----------------H---HHHHH
Confidence 689999999975322 35566666 66 79999999999942 210 0 12334
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcc--cccCCCChHHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKW 171 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt--~~~~~~~~~Q~~W 171 (373)
.+..+....|+++|+||||.... .+...+. .. ... ..++..... ... ........+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~-------~~~~~~~-~~------~~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHAT-DP------GYI-DKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCS-SS------GGG-GGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhh-------ccccccC-Cc------ccc-cchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 44444323589999999997421 0000000 00 000 000000000 000 0001124678899
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCc-CCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCC
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWY-SSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~-~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
|++.............|++.|++++ .......... ..+.+.+++.++ +++++++||+|...... .+++
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQ--PTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSC--CHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCC--CHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 8764332211101225666676653 2211111111 125677888888 99999999999866542 2578
Q ss_pred EEEEeCCCCC
Q 017367 250 VHITIGDGGN 259 (373)
Q Consensus 250 ~yi~~G~gG~ 259 (373)
++|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8888888665
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-14 Score=129.02 Aligned_cols=199 Identities=14% Similarity=0.058 Sum_probs=109.7
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
.+||+++||+|...... .-.++|+||++||++.. |. ..++..+.+.++.+
T Consensus 59 ~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 58999999999765321 12579999999999942 32 12344555666665
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhc----cc----CCCC----CCCCCCCcceE----EEEeCCEEEEEEcccccC
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSS----RF----AFPS----EESGSLSSFYY----SFNAGGIHFIMLGAYISY 162 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~----~~----~~p~----~~~~~~~~~~y----s~~~g~~~fi~ldt~~~~ 162 (373)
. ..++++|+||||..... ..+..... ++ ..+. +......+..| ++.+++++|++......+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 24689999999986431 11110000 00 0000 00000011112 466789999986543211
Q ss_pred ---CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc-cchHHHHHHHHHHH-HHcCccEEEeccccceeeee
Q 017367 163 ---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-REAECMRVEMEALL-YSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 163 ---~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll-~~~~v~lvl~GH~H~~~r~~ 237 (373)
....++.+++.+....... ...|++.|.|++....... .......+.|.+.+ ++.+++++++||+|......
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip~---~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~ 262 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIPE---GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM 262 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSCT---TCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE
T ss_pred CCcCCCcchHHHHHHHHhhCCC---CCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE
Confidence 1122222334333344332 2358888999887643110 00000124555666 68899999999999753321
Q ss_pred ecccCccCCCCCEEEEeCCCCCc
Q 017367 238 RVFNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 238 p~~~~~~~~~g~~yi~~G~gG~~ 260 (373)
..+++++|..|+-|..
T Consensus 263 -------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -------TDGYTTYINASTCTVS 278 (296)
T ss_dssp -------ECSSCEEEECBCSCTT
T ss_pred -------EECCEEEEECCcCCcC
Confidence 2457889998887764
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5e-13 Score=128.44 Aligned_cols=192 Identities=16% Similarity=0.089 Sum_probs=100.3
Q ss_pred CCeEEEEEecCCCCCC--------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 18 YPKRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~--------------~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
.++||+++||+|.+.. ..++++.+.+.+||+||++||++.. +. +.
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~--- 77 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP--- 77 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC---
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC---
Confidence 3699999999998742 1234555556799999999999842 21 00
Q ss_pred chHHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhccc-CCCCCCCCCCCcceEEEEeCCEEEEEEccccc
Q 017367 84 YQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRF-AFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS 161 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~ 161 (373)
...+..+.+.++.+. .++|+++|+||||................+ ..- ....++..+-+++.+++++....
T Consensus 78 -~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l------~~~~v~~~~~~~v~i~gl~~~~~ 150 (386)
T 3av0_A 78 -VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKIL------DGKDVINVNGEEIFICGTYYHKK 150 (386)
T ss_dssp -HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEEC------SEEEEEEETTEEEEEEEECCCCS
T ss_pred -HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEc------CCCcEEEeCCCCEEEEeCCCCCH
Confidence 123344566666663 368999999999986432110000111110 000 01111111114588888876432
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeeccc
Q 017367 162 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 241 (373)
Q Consensus 162 ~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~ 241 (373)
. ...+..+||+..-.... ...+.|+++|.|+.......+... +. .+. +++++++||+|..+.. +
T Consensus 151 ~-~~~~~~~~l~~l~~~~~--~~~~~Ill~H~~~~~~~~~~~~~~------~~-~l~--~~d~v~~GH~H~~~~~-~--- 214 (386)
T 3av0_A 151 S-KREEMLDKLKNFESEAK--NYKKKILMLHQGINPYIPLDYELE------HF-DLP--KFSYYALGHIHKRILE-R--- 214 (386)
T ss_dssp T-THHHHHHHHHHHHHHHH--TCSSEEEEECCCCTTTSSSSCSSC------GG-GSC--CCSEEEECSCCSCEEE-E---
T ss_pred H-HHHHHHHHHHHhhhhcc--cCCCEEEEECcCccccCCCCcccC------HH-Hhh--hCCeEEccCCCCCccc-c---
Confidence 2 11222333332111111 122478888988753211111000 11 111 3899999999987543 1
Q ss_pred CccCCCCCEEEEeCCC
Q 017367 242 YTLDPCGPVHITIGDG 257 (373)
Q Consensus 242 ~~~~~~g~~yi~~G~g 257 (373)
..++..+.+|+-
T Consensus 215 ----~~~~~i~ypGS~ 226 (386)
T 3av0_A 215 ----FNDGILAYSGST 226 (386)
T ss_dssp ----CSSSEEEECCCS
T ss_pred ----CCCceEEECCcc
Confidence 235555555553
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=8.3e-14 Score=127.29 Aligned_cols=186 Identities=18% Similarity=0.145 Sum_probs=102.4
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 18 YPKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
.+.||+++||+|..... .++++.+.+.++|.|+++||++.. |.. .....+.++
T Consensus 10 ~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~ 63 (270)
T 3qfm_A 10 DMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLD 63 (270)
T ss_dssp -CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHH
T ss_pred cccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHH
Confidence 36899999999965322 456667777799999999999942 210 022334444
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 176 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L 176 (373)
.+ .|+++|+||||.... ......+.++.. ...+.+ ............++++||++..
T Consensus 64 ~~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~L~~~~~~~L~~LP 120 (270)
T 3qfm_A 64 QL---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL---------RQCQYVLEEISLEEIEVLHNQP 120 (270)
T ss_dssp TS---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH---------HHHHHHHTTSCHHHHHHHHSCC
T ss_pred cc---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH---------HHHHHHHHHcCHHHHHHHHhCC
Confidence 43 478999999997411 000000000000 000000 0000111235688999998644
Q ss_pred hhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCC
Q 017367 177 ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 177 ~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
......-....|++.|..+....... -......+.+..++++.+++++|+||+|...... ..+|..+|..|+
T Consensus 121 ~~~~~~~~g~~i~lvHg~p~~~~~~~-~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGS 192 (270)
T 3qfm_A 121 LQIHRQFGDLTVGISHHLPDKNWGRE-LIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGS 192 (270)
T ss_dssp SEEEEEETTEEEEEESSBTTBSSSST-TSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECC
T ss_pred CceEEEECCcEEEEEECCCCCCCCce-ecCCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCC
Confidence 43211111234556665443221110 0000113456677777899999999999754432 146899999999
Q ss_pred CCCc
Q 017367 257 GGNL 260 (373)
Q Consensus 257 gG~~ 260 (373)
.|..
T Consensus 193 vg~p 196 (270)
T 3qfm_A 193 IGQP 196 (270)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8875
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=3e-12 Score=109.24 Aligned_cols=57 Identities=11% Similarity=0.047 Sum_probs=40.0
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
.|++.|.|++.... . .+.+.+++++++++++++||+|...... .+++.++..|+.|.
T Consensus 79 ~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 79 KIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred EEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 57777877764321 1 1356677788899999999999865542 35788888887654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.43 E-value=9.5e-13 Score=126.10 Aligned_cols=189 Identities=17% Similarity=0.214 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCC----h-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 20 KRIAIVGDLGLTYN----T-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 20 ~r~~~igD~h~~~~----~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
+||+++||+|.+.. . ..+++.+.+.+||+||++||+++.. +. +
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~-----~~------------~--- 60 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR-----NN------------P--- 60 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCS-----SS------------C---
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccC-----CC------------C---
Confidence 58999999998754 1 2233344457999999999999421 11 0
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEE-e-C-CEEEEEEccc
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN-A-G-GIHFIMLGAY 159 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~-~-g-~~~fi~ldt~ 159 (373)
-...+..+.+.+..+...+|+++|+||||... ...+..+... ++.+.........+.+. . | .+.++.+.-.
T Consensus 61 -~~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~---~~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 61 -SVVALHDLLDYLKRMMRTAPVVVLPGNQDWKG---LKLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp -CHHHHHHHHHHHHHHHHHSCEEECCCTTSCTT---HHHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred -CHHHHHHHHHHHHHHHhCCCEEEEcCCCcccc---Cccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 01234456666666632389999999999632 1111111111 11110000001112232 1 2 3666666432
Q ss_pred ccC----CCChHHHHHHHHHHhhcc---CCCCCeEEEEeCCCCcCCCCCCccchHH-HHHHHHHHHHHcCccEEEecccc
Q 017367 160 ISY----DKSGHQYKWLEKDLANVD---RSVTPWLVATWHPPWYSSYSSHYREAEC-MRVEMEALLYSYGVDIVFNGHVH 231 (373)
Q Consensus 160 ~~~----~~~~~Q~~WL~~~L~~~~---~~~~~~iIv~~H~P~~~~~~~~~~~~~~-~~~~l~~ll~~~~v~lvl~GH~H 231 (373)
... ....++.+|+.+.|+... .....+.|+++|.++..... +...+. ....+...+...+++++++||+|
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH~H 212 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGHIH 212 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEccccc
Confidence 111 123567899998887211 01234689999988754221 000000 00111112223579999999999
Q ss_pred ceeee
Q 017367 232 AYERS 236 (373)
Q Consensus 232 ~~~r~ 236 (373)
..+..
T Consensus 213 ~~q~~ 217 (379)
T 3tho_B 213 SFREI 217 (379)
T ss_dssp SCEEE
T ss_pred CCeEe
Confidence 98654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-12 Score=113.40 Aligned_cols=178 Identities=17% Similarity=0.151 Sum_probs=95.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
.+|++++||+|..... .++++.+. ++|.|+++||++.. |. ......+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~--------------------~~~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GP--------------------RPRECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SS--------------------CHHHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CC--------------------CHHHHHHHHHh
Confidence 4899999999954322 23344443 89999999999931 21 01223344444
Q ss_pred hhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHh
Q 017367 98 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLA 177 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~ 177 (373)
+ . ++++|+||||........ . ..+. . ..... + .........++++||++...
T Consensus 55 ~--~-~~~~v~GNhD~~~~~~~~----~-~~~~--~-----~~~~~------------~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L--A-PNISVIGNHDWACIGRLS----L-DEFN--P-----VARFA------------S-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H--C-SSEECCCHHHHHHTCCCC----C-C--C--G-----GGGCH------------H-HHHHHHCCHHHHHHHHHCCS
T ss_pred c--C-CCEEEeCchHHHHhccCC----c-cccC--H-----HHHHH------------H-HHHHHHcCHHHHHHHHhCCc
Confidence 4 2 369999999974211000 0 0000 0 00000 0 00011246789999986544
Q ss_pred hccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeee----------c--ccCcc-
Q 017367 178 NVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR----------V--FNYTL- 244 (373)
Q Consensus 178 ~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p----------~--~~~~~- 244 (373)
.... . .|++.|.++...... +... ...+.+++.+++++++|+||+|....... . .....
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~~-~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIWE-YIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTTC-CCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred EEEE-C---CEEEEECCcCCcccc-ccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 3332 1 255566655432211 1111 24567788899999999999997543320 0 00000
Q ss_pred CCCCCEEEEeCCCCCc
Q 017367 245 DPCGPVHITIGDGGNL 260 (373)
Q Consensus 245 ~~~g~~yi~~G~gG~~ 260 (373)
-+.|...|..|+-|..
T Consensus 179 l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQP 194 (246)
T ss_dssp CSSSCEEEEECCSSCC
T ss_pred cCCCeEEEECCccCCC
Confidence 1235778888888774
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.38 E-value=6.3e-12 Score=108.64 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=45.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~-~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|.... ..++++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995322 2345666666799999999999821 123334444
Q ss_pred hcCCCeEEecCCCCcC
Q 017367 99 VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~ 114 (373)
+.|+++|+||||..
T Consensus 75 --~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 75 --NANIIATYGNNDGE 88 (190)
T ss_dssp --SSEEEEECCTTCCC
T ss_pred --CCCEEEEeCCCcch
Confidence 67999999999974
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-11 Score=103.06 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=43.8
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 19 ~~r~~~igD~h~~~~---~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
.+||+++||+|...+ ..+.++.+. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999994222 234555544 689999999999831 123344
Q ss_pred hhhhcCCCeEEecCCCCcC
Q 017367 96 QNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~ 114 (373)
+.+ ..|+++|+||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 444 46999999999973
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-13 Score=116.01 Aligned_cols=136 Identities=15% Similarity=0.216 Sum_probs=82.3
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 20 KRIAIVGDLGLTYNT--------------TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
+||+++||+|.+... ...++.+.+ .++|+|+++||++.. |. .
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~------~~----------------~ 59 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWH------FN----------------D 59 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSC------SC----------------C
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCC------ch----------------h
Confidence 689999999976432 123344444 489999999999942 11 0
Q ss_pred chHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC
Q 017367 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD 163 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~ 163 (373)
+ ..+.+.++.+ ..|+++|+||||... ..+...|. . +.
T Consensus 60 ~----~~~~~~l~~l--~~~~~~v~GNhD~~~-------~~~~~~~~--------------~----------l~------ 96 (195)
T 1xm7_A 60 K----NEYLRIWKAL--PGRKILVMGNHDKDK-------ESLKEYFD--------------E----------IY------ 96 (195)
T ss_dssp T----TSHHHHHHHS--SSEEEEECCTTCCCH-------HHHTTTCS--------------E----------EE------
T ss_pred H----HHHHHHHHHC--CCCEEEEeCCCCCch-------hhhhhhhh--------------c----------hh------
Confidence 1 1234455555 458999999999741 11211110 0 00
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 164 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 164 ~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
+..||+ +. . ...|+++|.|++......+. ...+.+.+++.+++++++|+||+|....
T Consensus 97 ----~~~~l~----~~--~--~~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 97 ----DFYKII----EH--K--GKRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp ----SSEEEE----EE--T--TEEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred ----HHHHHH----hc--C--CcEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 011111 11 1 23688888887665432221 2347788889999999999999998654
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-10 Score=108.52 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=32.0
Q ss_pred CCCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCcccc
Q 017367 17 SYPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 17 ~~~~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
..++||+++||+|++... .++++.+.+.+||+||++||++.
T Consensus 30 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd 83 (431)
T 3t1i_A 30 ENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFH 83 (431)
T ss_dssp GGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 347999999999986421 33455566789999999999995
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-10 Score=108.13 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=31.8
Q ss_pred CCeEEEEEecCCCCCC---------h----HHHHHHHHhCCCCEEEEcCcccc
Q 017367 18 YPKRIAIVGDLGLTYN---------T----TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~---------~----~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
..+||+++||+|++.. . .++++.+.+.+||+||++||++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 64 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 64 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4799999999998743 1 23555666789999999999994
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-10 Score=108.58 Aligned_cols=73 Identities=21% Similarity=0.368 Sum_probs=51.5
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
+||+++||+|.+... .++++.+.+.++|+||++||++.. +. + ..
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~------~~------------~----~~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS------SR------------P----SP 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS------SS------------C----CH
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCC------CC------------C----CH
Confidence 589999999987531 234455556899999999999942 11 0 01
Q ss_pred HHHHHHHHHHhhhh-cCCCeEEecCCCCcC
Q 017367 86 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIE 114 (373)
Q Consensus 86 ~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~ 114 (373)
..+..+.+.++.+. .++|+++|+||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 23445566677764 378999999999985
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=5.9e-10 Score=107.85 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=32.0
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCcccc
Q 017367 18 YPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
.++||+++||+|++... .++++.+.+.+||+||++||++.
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 127 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 127 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 47999999999987431 34566666789999999999994
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-09 Score=95.66 Aligned_cols=75 Identities=15% Similarity=0.264 Sum_probs=48.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|..... .++++.+.+.++|+|+++||++.. |... ...+.|. ...+.+.++.+
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~~ 87 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNEV 87 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHhc
Confidence 799999999975322 345566655689999999999942 1100 0111121 13344555555
Q ss_pred hcCCCeEEecCCCCcC
Q 017367 99 VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~ 114 (373)
..|+++|+||||..
T Consensus 88 --~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 --AHKVIAVRGNCDSE 101 (208)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCceEEEECCCchH
Confidence 36899999999973
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.90 E-value=4.9e-09 Score=104.33 Aligned_cols=185 Identities=16% Similarity=0.122 Sum_probs=93.8
Q ss_pred CCeEEEEEecCCCCCC-----------hHHHHHHHHhC----CC-CEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 18 YPKRIAIVGDLGLTYN-----------TTCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------~~~~l~~l~~~----~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
..+||++++|+|.... ....++++.+. ++ +++|.+||++..... .
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~-------------------~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH-------------------H
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch-------------------h
Confidence 3699999999997532 12345555432 45 799999999843211 0
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEeCCEE-
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIH- 152 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~g~~~- 152 (373)
+.. ..+...+.|..+ +. -++++||||+... .+.+....+....|--.. + .....|..++.++++
T Consensus 68 ~~~--~~~~~~~~ln~l--g~-d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DLQ--DAEPDFRGMNLV--GY-DAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HTT--TTHHHHHHHHHH--TC-CEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hhc--CCcHHHHHHhcc--CC-CEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 000 112344556665 33 3688999998532 122222222222221110 0 012345567888855
Q ss_pred -EEEEccccc--CC-C----------ChHH-HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc-chHHHHHHHHHH
Q 017367 153 -FIMLGAYIS--YD-K----------SGHQ-YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-EAECMRVEMEAL 216 (373)
Q Consensus 153 -fi~ldt~~~--~~-~----------~~~Q-~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~-~~~~~~~~l~~l 216 (373)
|+.+.+... +. . ..+. .+|++ .|++. .+...+|++.|.|.......... .. ...+.+.
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~---~~~la~~ 214 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG---DVEMARA 214 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC---HHHHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCch---HHHHHHh
Confidence 455544321 10 0 0122 23333 23321 14567999999997543211000 00 1223333
Q ss_pred HHHcCccEEEecccccee
Q 017367 217 LYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 217 l~~~~v~lvl~GH~H~~~ 234 (373)
+...++|++|+||+|...
T Consensus 215 ~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 215 LPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp SCTTSSSEEECCSSCCBC
T ss_pred CCCCceeEEECCCCCccc
Confidence 334459999999999754
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-08 Score=99.54 Aligned_cols=208 Identities=16% Similarity=0.142 Sum_probs=106.6
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
..++|++++|+|.... ....++++.+..++ ++|.+||++.+...
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~------------------ 79 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF------------------ 79 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH------------------
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH------------------
Confidence 3699999999996431 13456677666776 77889999953211
Q ss_pred CcccchH----HHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCC-------CCCcceEEEEe
Q 017367 80 IHETYQP----RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG-------SLSSFYYSFNA 148 (373)
Q Consensus 80 ~~~~y~~----~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~-------~~~~~~ys~~~ 148 (373)
. .|.. ......+.|..+ +.. +.++||||+... .+.+..+.+....|--... .....|..++.
T Consensus 80 -~-~~~~~~~~~~~~~~~~ln~l--g~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~ 152 (527)
T 3qfk_A 80 -C-NYLIAHSGSSQPLVDFYNRM--AFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQV 152 (527)
T ss_dssp -H-HHHHHTTCSSHHHHHHHHHT--CCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEE
T ss_pred -H-HHHhhcccCcchHHHHHHhc--CCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEE
Confidence 0 0000 012344555555 444 567999997532 2233333333332221110 01234566788
Q ss_pred CCEEE--EEEccccc--CCC--------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCC-CC-----ccchHHHH
Q 017367 149 GGIHF--IMLGAYIS--YDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS-SH-----YREAECMR 210 (373)
Q Consensus 149 g~~~f--i~ldt~~~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~-~~-----~~~~~~~~ 210 (373)
+++++ |.+.+... +.. -....+.+++.+++++ .+.+.+|++.|.+...... .. ..+. ..
T Consensus 153 ~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~--~~ 229 (527)
T 3qfk_A 153 GDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGEN--EG 229 (527)
T ss_dssp TTEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSC--CH
T ss_pred CCEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccch--HH
Confidence 88555 55544211 110 0122344444444443 3456799999977643210 00 0010 01
Q ss_pred HHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
.++.+-+ ..+||++|+||+|..... . -+++..+.+|.-|...+
T Consensus 230 ~~la~~~-~~giDlIlgGHtH~~~~~-~-------v~~~~ivqag~~g~~lg 272 (527)
T 3qfk_A 230 YAMLEAF-SKDIDIFITGHQHRQIAE-R-------FKQTAVIQPGTRGTTVG 272 (527)
T ss_dssp HHHHHHH-GGGCSEEECCSSCCEEEE-E-------ETTEEEEEECSTTSEEE
T ss_pred HHHHHhc-CCCCcEEEECCCCcccce-E-------ECCEEEeccChhhCEEE
Confidence 1222222 247999999999986542 1 23555666666665443
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=5e-09 Score=105.09 Aligned_cols=174 Identities=18% Similarity=0.179 Sum_probs=93.9
Q ss_pred CCeEEEEEecCCCCCC------------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~------------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
..+||++++|+|.... ....++++.+..++ +++.+||++.+..+
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~----------------- 90 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY----------------- 90 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-----------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-----------------
Confidence 4699999999996421 13456667667788 89999999953211
Q ss_pred CCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCC----------CCCcceEEEEe
Q 017367 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG----------SLSSFYYSFNA 148 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~----------~~~~~~ys~~~ 148 (373)
.. + .......+.|..+ +. -+.++||||+... .+.+..+.+....|--... .....|..++.
T Consensus 91 --~~-~-~~~~~~~~~ln~l--g~-d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 91 --FN-Q-YRGLADRYFMHRL--RY-RAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp --HH-H-HTTHHHHHHHHHT--TC-CEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred --HH-H-hCCcHHHHHHHhc--CC-CccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 00 0 0112334455555 33 3688999998632 1222333332222211100 01234566788
Q ss_pred CCEE--EEEEccccc---CCC--------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 149 GGIH--FIMLGAYIS---YDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 149 g~~~--fi~ldt~~~---~~~--------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
++++ |+.+.+... ... ..++++.+.+.|++ .+...+|++.|.|... + ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~---------d------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------D------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------H------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch---------H------HH
Confidence 8755 555544310 001 11333333334443 2445699999988521 0 12
Q ss_pred HHHH-cCccEEEeccccceee
Q 017367 216 LLYS-YGVDIVFNGHVHAYER 235 (373)
Q Consensus 216 ll~~-~~v~lvl~GH~H~~~r 235 (373)
+.++ .+||++|+||+|....
T Consensus 224 la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHHhCCCccEEEeCCcCcccc
Confidence 3333 4899999999998554
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=5.9e-08 Score=97.72 Aligned_cols=176 Identities=16% Similarity=0.160 Sum_probs=95.2
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccC
Q 017367 18 YPKRIAIVGDLGLTYNT----------------------TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCS 74 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~----------------------~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~ 74 (373)
..++|++++|+|..... ...++++.+..++ ++|.+||++.+..+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 46999999999954211 2345666656666 899999999542110
Q ss_pred CCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC------CC----CCcceE
Q 017367 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES------GS----LSSFYY 144 (373)
Q Consensus 75 ~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~------~~----~~~~~y 144 (373)
..+ ......+.|..+ +.. +.++||||+... .+.+..+.+....|--.. +. .-..|-
T Consensus 79 -------~~~--~g~~~~~~ln~l--g~D-~~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAG--NFH-YFTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHH--TCS-EEECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhc--CcC-eeeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 112344555555 444 478999998522 222333333333221110 00 112455
Q ss_pred EEEeCCEE--EEEEcc-cc---cCCC-----ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHH
Q 017367 145 SFNAGGIH--FIMLGA-YI---SYDK-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 213 (373)
Q Consensus 145 s~~~g~~~--fi~ldt-~~---~~~~-----~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l 213 (373)
.++.++++ ||.+.+ .. .... .....+-+++.++++++...+.+|++.|.+... . .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d----~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------N----I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------H----H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H--
Confidence 67888855 555533 10 0000 122334455555555444466799999976421 1 1
Q ss_pred HHHHHH-cCccEEEecccccee
Q 017367 214 EALLYS-YGVDIVFNGHVHAYE 234 (373)
Q Consensus 214 ~~ll~~-~~v~lvl~GH~H~~~ 234 (373)
.+.++ .+||++|+||+|...
T Consensus 211 -~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECSSCCEE
T ss_pred -HHHHhCCCCCEEEeCCCCccc
Confidence 22222 279999999999866
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.79 E-value=2.5e-07 Score=92.70 Aligned_cols=153 Identities=17% Similarity=0.089 Sum_probs=78.7
Q ss_pred HHHHHHhC--C--CC-EEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCC
Q 017367 37 TINHMSSN--E--PD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNH 111 (373)
Q Consensus 37 ~l~~l~~~--~--pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNH 111 (373)
.++++.+. + || ++|.+||++.+... . .+ .......+.|..+ +.+++ + |||
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-------------------~-~~-~~g~~~~~~ln~l--g~d~~-~-GNH 164 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL-------------------S-LL-TRGEAVVRWQNLV--GVDHM-V-SHW 164 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH-------------------H-HH-HTTHHHHHHHHHH--TCCEE-C-CSG
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh-------------------h-hh-hCCHHHHHHHHhh--CCcEE-e-cch
Confidence 34555444 4 88 99999999953210 0 00 0112345566666 66765 6 999
Q ss_pred CcCCCCCCcchhhhhcccCCCCCCCC--------CCCcceEEEEeCCEE--EEEEcccc-------------cCCCChHH
Q 017367 112 EIEAQAGNQTFVAYSSRFAFPSEESG--------SLSSFYYSFNAGGIH--FIMLGAYI-------------SYDKSGHQ 168 (373)
Q Consensus 112 D~~~~~~~~~~~~~~~~~~~p~~~~~--------~~~~~~ys~~~g~~~--fi~ldt~~-------------~~~~~~~Q 168 (373)
|+... .+.+..+.+.+..|--... .....|-.++.++++ +|++.+.. .+....+.
T Consensus 165 Efd~G--~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (562)
T 2wdc_A 165 EWTLG--RERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERR 242 (562)
T ss_dssp GGGGC--HHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHH
T ss_pred hcccC--HHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHH
Confidence 98432 2233333333332211100 011245567788855 45554321 01112233
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH-cCccEEEecccccee
Q 017367 169 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYE 234 (373)
Q Consensus 169 ~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~~~ 234 (373)
++-+.+.|++ .+...+|++.|.|... . .++.++ .+||++|+||+|...
T Consensus 243 ~~~~v~~l~~---~~~d~iIvLsH~g~~~--------d-------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 243 LQEAVDKARA---EGANAVVLLSHNGMQL--------D-------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHHHH---TTCSEEEEEECSCHHH--------H-------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHHHH---CCCCEEEEEeCCCCcc--------h-------HHHHhcCCCCcEEEeCCCCCCC
Confidence 3322233433 3456799999988521 0 123333 489999999999753
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.2e-08 Score=100.21 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=94.8
Q ss_pred CCeEEEEEecCCCCCC---------------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCC
Q 017367 18 YPKRIAIVGDLGLTYN---------------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSF 75 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~---------------------~~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~ 75 (373)
..++|++++|+|.... ....++++.+..+ +++|.+||++.+..+.
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~------------- 90 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF------------- 90 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH-------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhh-------------
Confidence 4699999999995421 1235666666666 5999999999532110
Q ss_pred CCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchh-hhhcccCCCCCCCC---C---------CCcc
Q 017367 76 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV-AYSSRFAFPSEESG---S---------LSSF 142 (373)
Q Consensus 76 ~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~~~~~~~~p~~~~~---~---------~~~~ 142 (373)
.. .......+.|..+ +.. ++++||||+... .+.+. .+.+....|--... . ....
T Consensus 91 ------~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 91 ------TV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp ------HH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred ------hh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 00 0112344555555 444 578999998532 11222 23332222221110 0 1234
Q ss_pred eEEEEeCCEEEE--EEccccc---CCCC-----hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHH
Q 017367 143 YYSFNAGGIHFI--MLGAYIS---YDKS-----GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVE 212 (373)
Q Consensus 143 ~ys~~~g~~~fi--~ldt~~~---~~~~-----~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~ 212 (373)
|..++.+++++- .+.+... .... ....+.+++.++++++.+...+|++.|.+... . ..
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~~ 225 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----KL 225 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----HH
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----HH
Confidence 666788886654 4433210 0010 12344455555544433466799999987521 1 12
Q ss_pred HHHHHHHcCccEEEecccccee
Q 017367 213 MEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 213 l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
+.+.+ .+||++|+||+|...
T Consensus 226 la~~~--~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 226 IAQKV--RGVDVVVGGHSNTFL 245 (546)
T ss_dssp HHHHS--TTCCEEECCSSCCCC
T ss_pred HHHhC--CCCcEEEeCCcCccc
Confidence 22111 379999999999853
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.6e-08 Score=97.83 Aligned_cols=185 Identities=18% Similarity=0.162 Sum_probs=94.8
Q ss_pred CeEEEEEecCCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCccccccccccCCCCCCccccCCCCC
Q 017367 19 PKRIAIVGDLGLTYN----------------T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 19 ~~r~~~igD~h~~~~----------------~---~~~l~~l~~~~pd~vi~-~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
.++|++++|+|.... . ...++++.+..++.+++ +||++.+..+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 599999999995321 1 23566666678887776 9999953211
Q ss_pred CCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C--CCCcceEEEEeC
Q 017367 79 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G--SLSSFYYSFNAG 149 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~--~~~~~~ys~~~g 149 (373)
...+ ......+.|..+ + +-++++||||+... .+.+..+.+....|--.. + .....|..++.+
T Consensus 69 --~~~~--~g~~~~~~ln~l--g-~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSLT--KGKAIIDIMNTM--P-FDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHTT--TTHHHHHHHTTS--C-CSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhhc--CChHHHHHHHhc--C-CcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 0000 112334444444 3 33677899998532 222333333222221110 0 012345567888
Q ss_pred CEEE--EEEcccc-----cC---C---CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc----hHHHHHH
Q 017367 150 GIHF--IMLGAYI-----SY---D---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE----AECMRVE 212 (373)
Q Consensus 150 ~~~f--i~ldt~~-----~~---~---~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~----~~~~~~~ 212 (373)
++++ |.+-+.. .. . ......+.+++.++++++. .+.+|++.|.+........... .....
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d-- 216 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD-- 216 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH--
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH--
Confidence 8554 5553210 00 0 0123344555555555433 6789999998753221110000 00011
Q ss_pred HHHHHHHc-CccEEEeccccce
Q 017367 213 MEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 213 l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
..+.++. ++|++|+||+|..
T Consensus 217 -~~la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 217 -IQTASQVKGLDILITGHAHVG 237 (509)
T ss_dssp -HHHHHHCSSCCEEEEESSCCC
T ss_pred -HHHHhcCCCCcEEEeCCcCcc
Confidence 1233333 7999999999963
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.68 E-value=6.3e-07 Score=89.58 Aligned_cols=215 Identities=16% Similarity=0.174 Sum_probs=106.4
Q ss_pred EEeCCCCCCCCCCeEEEEEecCCCCCC--------------hHHH---HHHHH-hCCCC-EEEEcCccccccccccCCCC
Q 017367 7 FRTLPASGPQSYPKRIAIVGDLGLTYN--------------TTCT---INHMS-SNEPD-LVLLVGDVTYANLYLTNGTG 67 (373)
Q Consensus 7 F~t~p~~~~~~~~~r~~~igD~h~~~~--------------~~~~---l~~l~-~~~pd-~vi~~GDl~y~~~~~~~g~~ 67 (373)
+-+.|....+...++|++++|+|.... ..+. ++++. +.+++ ++|.+||++.+..+.+.
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~--- 79 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--- 79 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhh---
Confidence 445566555556799999999996421 1222 33322 35788 57999999954322110
Q ss_pred CCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCC--------C
Q 017367 68 SDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESG--------S 138 (373)
Q Consensus 68 ~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~--------~ 138 (373)
+........+.|..+ +.. +.++||||+...... ..+....+....|.-..+ .
T Consensus 80 ----------------~~~~g~~~~~~ln~l--g~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 80 ----------------TSPNGLKSTPIFIKQ--DYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ----------------SSSTTTTTHHHHTTS--CCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ----------------cccCCHHHHHHHHhc--CCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 000011124455555 444 568899998632100 122222222222221111 0
Q ss_pred ---CCcceEEEEe--CCEEEEEEcccccCCC--------ChHH--H-HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCC
Q 017367 139 ---LSSFYYSFNA--GGIHFIMLGAYISYDK--------SGHQ--Y-KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH 202 (373)
Q Consensus 139 ---~~~~~ys~~~--g~~~fi~ldt~~~~~~--------~~~Q--~-~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~ 202 (373)
....|.-++. +++++-++.-...+.. ...+ . +|+++.++ .+...+|++.|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC---
Confidence 1234556777 7766555442221111 1222 1 36655442 356789999998863111
Q ss_pred ccchHHHHHHHHHHHHH--cCccE-EEeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 203 YREAECMRVEMEALLYS--YGVDI-VFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 203 ~~~~~~~~~~l~~ll~~--~~v~l-vl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
... ......+.+ .++|+ +|+||+|..... +. .+++..+.+|.-|...+
T Consensus 214 -d~~----~~~~~~lA~~~~giDilIlgGHtH~~~~~-~~------~~~t~ivqaG~~g~~lG 264 (557)
T 3c9f_A 214 -GEF----YQVHQYLRQFFPDTIIQYFGGHSHIRDFT-VF------DSLSTGLQSGRYCETVG 264 (557)
T ss_dssp -CHH----HHHHHHHHHHCTTSEEEEEECSSCCEEEE-EE------ETTEEEEEECSTTSEEE
T ss_pred -ccc----cHHHHHHHHhCCCCCEEEECCCCCCCCcc-ee------cCCeEeeeccchhcEEE
Confidence 111 122222333 37994 999999987431 11 23454555665555433
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-08 Score=89.37 Aligned_cols=66 Identities=27% Similarity=0.368 Sum_probs=42.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
..|++++||+|..... .++++.+.. .++|.||++||++.. |.. . .+.++
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~------g~~-----------------~------~~~~~ 62 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR------GAE-----------------N------VECLE 62 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS------SSC-----------------H------HHHHG
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCC------CCC-----------------h------HHHHH
Confidence 4799999999964322 234444433 368999999999942 220 0 12233
Q ss_pred hhhcCCCeEEecCCCCcC
Q 017367 97 NLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~ 114 (373)
.+. ..++++|.||||..
T Consensus 63 ~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 63 LIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGG-STTEEECCCHHHHH
T ss_pred HHh-cCCEEEEccCcHHH
Confidence 332 35899999999964
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.2e-06 Score=77.78 Aligned_cols=184 Identities=16% Similarity=0.184 Sum_probs=98.0
Q ss_pred CeEEEEEecCCCCCCh---HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYNT---TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~---~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.+||+++||+|..... ...++++.++ ++|+++..||.+.. |. . +. ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~------------g----~~---~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GK------------G----LS---LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TS------------S----CC---HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CC------------C----cC---HHHHHH
Confidence 4899999999854221 2245555544 68999999999852 21 0 11 123344
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcc--c----CCCCCCCCC-CCcceEEEEeCCEEEEE--EcccccCC--
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--F----AFPSEESGS-LSSFYYSFNAGGIHFIM--LGAYISYD-- 163 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~--~----~~p~~~~~~-~~~~~ys~~~g~~~fi~--ldt~~~~~-- 163 (373)
|..+ ++-+ .++||||+.... + ...|.+. . .+|...... .+..|.-++.+++++-+ +-+...+.
T Consensus 59 ln~~--G~Da-~TlGNHefD~g~--~-~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVNY-ITMGNHTWFQKL--D-LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCCE-EECCTTTTCCGG--G-HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCCE-EEEccCcccCCc--c-HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 5444 4554 567999996431 1 1122221 1 122211000 33456678888755544 43432121
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc
Q 017367 164 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 243 (373)
Q Consensus 164 ~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~ 243 (373)
.-..-.+-+++.++ +.+.+.+||.+|.-. ..+ .+.+... -+.+||+|+.||+|..... -.
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~---------t~E--k~~la~~-~dg~VD~VvGgHTHv~t~d-----~~ 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET---------TSE--KNAFCMA-FDGYVTTIFGTHTHVPSAD-----LR 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC---------HHH--HHHHHHH-HTTTSSEEEEESSSSCCTT-----CE
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc---------hHH--HHHHHHh-CCCCeEEEEeCCCCcCCCc-----eE
Confidence 11222444555555 246778999999411 111 1122221 2236999999999974432 11
Q ss_pred cCCCCCEEEE
Q 017367 244 LDPCGPVHIT 253 (373)
Q Consensus 244 ~~~~g~~yi~ 253 (373)
+-++|+.|++
T Consensus 193 il~~gt~~i~ 202 (281)
T 1t71_A 193 ITPKGSAYIT 202 (281)
T ss_dssp ECTTSCEEES
T ss_pred EecCCcEEEe
Confidence 2347888876
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-06 Score=81.85 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCccccc
Q 017367 18 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTYA 58 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------~~~~l~~l~~~~pd-~vi~~GDl~y~ 58 (373)
..++|++.+|+|.... ....++++.+..++ ++|.+||++.+
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qG 68 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQG 68 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCC
Confidence 3599999999996431 12345666655555 67889999953
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-05 Score=70.84 Aligned_cols=187 Identities=18% Similarity=0.273 Sum_probs=100.0
Q ss_pred eEEEEEecCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~---~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+||+++||.=.... ....++++.+.. |++|+.|..+.. |.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~------G~g----------------~~---~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAAR------GKG----------------LD---RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTT------TSS----------------CC---HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccC------CCC----------------cC---HHHHHHHH
Confidence 58999999832211 234566666666 998887777632 321 11 12233444
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhccc--CCCCCCC-CCCCcceEEEEeCCEEEEEEc--ccccCCCChHHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF--AFPSEES-GSLSSFYYSFNAGGIHFIMLG--AYISYDKSGHQYKW 171 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~--~~p~~~~-~~~~~~~ys~~~g~~~fi~ld--t~~~~~~~~~Q~~W 171 (373)
.+ ++-++ +.|||++... ....|.+.. -.|.+-+ +..+..|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~~-T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDLV-SLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCEE-ECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCEE-EeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 44 66664 7799999742 222333221 1222211 122456777889987766655 32211111222334
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEE
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 251 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~y 251 (373)
+++.+++++ .+.+|+.+|.-. . .+ .+.+.. .-+.+|++|+.||+|..... -.+-++|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~--------t-se--k~~la~-~~dg~Vd~VvGgHTHv~t~d-----~~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEA--------T-SE--KMALAH-YLDGRASAVLGTHTHVPTLD-----ATRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSC--------H-HH--HHHHHH-HHBTTBSEEEEESSCSCBSC-----CEECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCc--------H-HH--HHHHHH-hCCCCeEEEEcCCCCcCCCc-----cEEcCCCcEe
Confidence 555666554 567999999421 1 11 112222 22346999999999974332 2224578888
Q ss_pred EE-eCCCCC
Q 017367 252 IT-IGDGGN 259 (373)
Q Consensus 252 i~-~G~gG~ 259 (373)
++ .|..|.
T Consensus 188 itd~G~~G~ 196 (252)
T 2z06_A 188 QTDVGMTGT 196 (252)
T ss_dssp ESCCCCBEE
T ss_pred ecCCccccc
Confidence 76 344443
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.31 E-value=2e-05 Score=70.45 Aligned_cols=187 Identities=14% Similarity=0.131 Sum_probs=98.1
Q ss_pred eEEEEEecCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~---~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+||+++||.=.... ....++++.+.. |++|..|+.+.. |. . +. ....+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~------G~------------g----~~---~~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAG------GF------------G----MH---RDAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTT------TS------------S----CC---HHHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccC------Cc------------C----CC---HHHHHHHH
Confidence 58999999732111 133456665556 999998888742 22 0 01 12234444
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhcccC----CCCCCC--CCCCcceEEEEeCCEEEEEEc--ccccCCCChHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEES--GSLSSFYYSFNAGGIHFIMLG--AYISYDKSGHQ 168 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~----~p~~~~--~~~~~~~ys~~~g~~~fi~ld--t~~~~~~~~~Q 168 (373)
.+ ++-+ .++||||+... ....+.+... .|.+-+ +..+..|.-++.++.++-+++ +......-..-
T Consensus 55 ~~--G~Da-~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAGC-LTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCSE-EECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCCE-EEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 44 5554 56699999742 2222322111 233321 123456667888876554443 43221122222
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCC
Q 017367 169 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 248 (373)
Q Consensus 169 ~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g 248 (373)
.+-+++.+++. +.+.+||.+|.-. ..+ .+.+... -+.+||+++.||+|...... .+-++|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~---------t~E--k~~la~~-~dg~vd~VvGgHTHv~~~d~-----~il~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA---------TSE--KEAMGWH-LAGRVAAVIGTHTHVPTADT-----RILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC---------HHH--HHHHHHH-HTTSSSEEEEESSCSCBSCC-----EEETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC---------hHH--HHHHHHh-CCCCeEEEEeCCCCcCCCce-----EEcCCC
Confidence 34456666655 4567999999411 111 1222222 23369999999999744321 112478
Q ss_pred CEEEE-eCCCCC
Q 017367 249 PVHIT-IGDGGN 259 (373)
Q Consensus 249 ~~yi~-~G~gG~ 259 (373)
+.|++ .|..|.
T Consensus 188 t~~i~d~G~~G~ 199 (255)
T 1t70_A 188 TAYQTDAGFTGP 199 (255)
T ss_dssp EEEESCCCCBEE
T ss_pred eEEEEcCccccc
Confidence 88875 344443
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.4e-05 Score=74.84 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=29.5
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCccccc
Q 017367 18 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTYA 58 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------~~~~l~~l~~~~pd-~vi~~GDl~y~ 58 (373)
..++|++.+|+|.... ....++++.++.++ ++|.+||++.+
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 3599999999996421 12356667666665 77899999954
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.15 E-value=4e-05 Score=76.32 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=88.2
Q ss_pred CeEEEEEecCCCCCC---------------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCC
Q 017367 19 PKRIAIVGDLGLTYN---------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 19 ~~r~~~igD~h~~~~---------------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
.++|++++|+|.... ....++++.+..++ ++|.+||++.+..+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~-------------- 68 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF-------------- 68 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHH--------------
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHH--------------
Confidence 489999999995321 12345666555665 678899999643210
Q ss_pred CCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcch-hhhhcccCCCCCCCC------------CCCcce
Q 017367 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF-VAYSSRFAFPSEESG------------SLSSFY 143 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~-~~~~~~~~~p~~~~~------------~~~~~~ 143 (373)
..+ ......++|..+ +.- ..++||||+.... +.+ ..+.+....|--... ..-..|
T Consensus 69 -----~~~--~g~~~i~~mN~l--gyD-a~~lGNHEFd~G~--~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py 136 (530)
T 4h1s_A 69 -----TVY--KGAEVAHFMNAL--RYD-AMALGNHEFDNGV--EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPY 136 (530)
T ss_dssp -----HHH--TTHHHHHHHHHT--TCC-EEECCGGGGTTTT--HHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSE
T ss_pred -----HHh--CChHHHHHHhcc--CCC-EEEEchhhhccCH--HHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccce
Confidence 001 112234455555 333 5789999996321 111 112222222221110 112345
Q ss_pred EEEEeCCEEEE--EEcccc---c--------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHH
Q 017367 144 YSFNAGGIHFI--MLGAYI---S--------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR 210 (373)
Q Consensus 144 ys~~~g~~~fi--~ldt~~---~--------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~ 210 (373)
.-++.+++++- ++-+.. . +....+..+..-+.|++ .+...+|++.|.... ..
T Consensus 137 ~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d---- 201 (530)
T 4h1s_A 137 KVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD---- 201 (530)
T ss_dssp EEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH----
T ss_pred EEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH----
Confidence 66788886654 443321 0 00112222223333443 356679999995421 11
Q ss_pred HHHHHHHHHc-CccEEEecccccee
Q 017367 211 VEMEALLYSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 211 ~~l~~ll~~~-~v~lvl~GH~H~~~ 234 (373)
. .+.++. ++|++|.||+|..-
T Consensus 202 ~---~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 202 K---LIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp H---HHHHHSTTCCEEECCSSCCCB
T ss_pred H---HHHhcCCCCCeeccCCcccee
Confidence 1 233333 79999999999743
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.59 E-value=2.8e-05 Score=70.78 Aligned_cols=67 Identities=22% Similarity=0.386 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+|++++||+|..... .+.++.+.. .++|.+|++||++. .|.. . ....+.+..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vd------rG~~-----------------s---~~~l~~l~~ 54 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVA------RGPG-----------------S---LDVLRYVKS 54 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSS------SSSC-----------------H---HHHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCC------CCCc-----------------c---HHHHHHHHh
Confidence 478999999965322 233443333 36799999999994 2320 0 123334444
Q ss_pred hhcCCCeEEecCCCCcC
Q 017367 98 LVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~ 114 (373)
+ ..+++.+.||||..
T Consensus 55 l--~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 55 L--GDSVRLVLGNHDLH 69 (280)
T ss_dssp T--GGGEEECCCHHHHH
T ss_pred C--CCceEEEECCCcHH
Confidence 4 23799999999963
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.58 E-value=4.1e-05 Score=69.07 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=26.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhCCC-CEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYN-TTCTINHMSSNEP-DLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~-~~~~l~~l~~~~p-d~vi~~GDl~y 57 (373)
.|++++||+|.... ..++++.+....+ |.||++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 49999999995432 1234444444444 99999999994
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0012 Score=63.92 Aligned_cols=180 Identities=17% Similarity=0.269 Sum_probs=98.0
Q ss_pred CCeEEEEEecCCCCCCh---HH----HHHHHH-----------hCCCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYNT---TC----TINHMS-----------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~---~~----~l~~l~-----------~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
...+++++||+|.+... .. .++.|. ..++..+|++||++.... ... +..
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~-----~~~--------e~~ 265 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST-----QSR--------DSI 265 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC---------------------
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc-----ccc--------hhh
Confidence 35799999999988752 11 223332 246889999999995421 100 000
Q ss_pred Ccccc---------hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCc------chh---hhhcccCCCCCCCCCCCc
Q 017367 80 IHETY---------QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ------TFV---AYSSRFAFPSEESGSLSS 141 (373)
Q Consensus 80 ~~~~y---------~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~------~~~---~~~~~~~~p~~~~~~~~~ 141 (373)
..+.| ....+.+..++..+...+|+..+|||||-....-.+ .|. .| ..+.. ..|
T Consensus 266 ~~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~-~~~~~-------vtN 337 (476)
T 3e0j_A 266 NKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQL-------VTN 337 (476)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS-TTEEE-------CCS
T ss_pred hhhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc-CccEE-------eCC
Confidence 01111 124566777888888899999999999975432111 011 11 01111 112
Q ss_pred ceEEEEeCCEEEEEEcccc-----cCCCChHHHHHHHHHHhhccC-CCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 142 FYYSFNAGGIHFIMLGAYI-----SYDKSGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 142 ~~ys~~~g~~~fi~ldt~~-----~~~~~~~Q~~WL~~~L~~~~~-~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
-|.++++|++|++..... .+.....-++.|++.|+--.- -..|=.+ |.|+..... +
T Consensus 338 -P~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdTl-----~~yP~~~~D------------p 399 (476)
T 3e0j_A 338 -PYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL-----GCYPFYKTD------------P 399 (476)
T ss_dssp -SEEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCSC------------T
T ss_pred -CeEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCce-----eeccCCCCC------------c
Confidence 366999999999887542 122334567788888875210 0011000 111110000 1
Q ss_pred HHHHcCccEEEeccccceeee
Q 017367 216 LLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 216 ll~~~~v~lvl~GH~H~~~r~ 236 (373)
++-+.-++++++||.|.|+-.
T Consensus 400 fVi~~~PhVyf~Gnq~~f~t~ 420 (476)
T 3e0j_A 400 FIFPECPHVYFCGNTPSFGSK 420 (476)
T ss_dssp TSCSSCCSEEEEEEESSCEEE
T ss_pred eeecCCCcEEEeCCCCcccee
Confidence 222346899999999998765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00025 Score=65.32 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=42.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
.+++++||+|..... .+.++.+.....+.+|++||++. .|.. . ......+..+
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VD------RG~~-----------------s---~evl~lL~~l 103 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVD------RGYY-----------------S---VETVTLLVAL 103 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSS------SSTT-----------------H---HHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccC------CCCC-----------------h---HHHHHHHHHH
Confidence 579999999965332 23344333345678899999994 2331 1 1123333333
Q ss_pred h--cCCCeEEecCCCCcC
Q 017367 99 V--SKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~--~~~P~~~v~GNHD~~ 114 (373)
. ..-.++.+.||||..
T Consensus 104 k~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 104 KVRYRERITILRGNHESR 121 (309)
T ss_dssp HHHCTTTEEECCCTTSST
T ss_pred HhhCCCcEEEEeCCCCHH
Confidence 1 233599999999975
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00039 Score=64.53 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=26.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
.++.++||+|..... .+.++.+.....+-+|++||++.
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 469999999976432 23344433345678999999994
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00049 Score=64.42 Aligned_cols=24 Identities=21% Similarity=0.480 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCccEEEecccccee
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
+.+.+++..++.++++.||+|..+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 456677888899999999999743
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0008 Score=61.42 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=25.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
.+++++||+|..... .+.++.+.....+-+|++||++.
T Consensus 56 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VD 94 (299)
T 3e7a_A 56 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 94 (299)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccC
Confidence 368999999976432 23333333345678999999994
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0013 Score=60.58 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++++.++++=||.=.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35677889999999999999864
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0016 Score=60.45 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=25.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCC-CEEEEcCcccc
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEP-DLVLLVGDVTY 57 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~p-d~vi~~GDl~y 57 (373)
..|++++||+|..... .+.++.+..... +.+|++||++.
T Consensus 63 ~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VD 103 (335)
T 3icf_A 63 DVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVD 103 (335)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSS
T ss_pred CceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccC
Confidence 4799999999976432 233333322223 46999999994
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0023 Score=62.58 Aligned_cols=25 Identities=20% Similarity=0.181 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCccEEEeccccceee
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
+.+.+.+++.++++++.||.+..+-
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g 411 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEG 411 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCC
Confidence 5677888999999999999987443
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0011 Score=61.80 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=26.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
.+++++||+|..... .+.++.......+-+|++||++.
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 469999999976432 23333332346688999999994
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0019 Score=62.94 Aligned_cols=22 Identities=9% Similarity=0.076 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCccEEEeccccc
Q 017367 211 VEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
+.+.+.+++++.++++-||.-.
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHcCCcEEEEccchh
Confidence 5678899999999999999865
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.60 E-value=0.23 Score=47.69 Aligned_cols=92 Identities=7% Similarity=0.193 Sum_probs=55.1
Q ss_pred CCeEEEEEecCCCCCC------hHHHHHHHHhC-CCCEEEEcCcccccccc-ccCCCCCCccccCCCC-CCCcccchHHH
Q 017367 18 YPKRIAIVGDLGLTYN------TTCTINHMSSN-EPDLVLLVGDVTYANLY-LTNGTGSDCYSCSFSK-TPIHETYQPRW 88 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~------~~~~l~~l~~~-~pd~vi~~GDl~y~~~~-~~~g~~~~~~~~~~~~-~~~~~~y~~~~ 88 (373)
.++++++.+......+ ....++.+.+. +||++|++|.++..... ...|... .+++ .+...+|+..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p-----~~~~~~~~~~t~~~lF 220 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLP-----NFPQFKTQPKTLDELF 220 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCC-----CCTTCSSCCSSHHHHH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCccc-----ccccccccccCHHHHH
Confidence 4799999999886543 23456666554 79999999999964311 0112100 0000 01134455444
Q ss_pred HH-HHHHHhhhhcCCCeEEecCCCCcC
Q 017367 89 DY-WGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 89 ~~-~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
+. +...++.+...+.++.|||+||..
T Consensus 221 ~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 221 LKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHhccCCCEEEEeCCccccc
Confidence 43 234455555678899999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 373 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 4e-74 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 6e-17 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 8e-08 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 4e-07 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 2e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-04 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 4e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 230 bits (587), Expect = 4e-74
Identities = 123/358 (34%), Positives = 170/358 (47%), Gaps = 72/358 (20%)
Query: 13 SGPQSYPKRIAIVGDLGLTYNTTCTINH--MSSNEPDLVLLVGDVTYANLYLTNGTGSDC 70
+G P ++GDLG ++++ T++H +S + VL VGD++YA+ Y +
Sbjct: 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNH------ 54
Query: 71 YSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE---AQAGNQTFVAYSS 127
RWD WGRF + V+ P + GNHEIE + F +S
Sbjct: 55 -------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY 101
Query: 128 RFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWL 187
R+ P E S S S F+YS H I+L +Y +Y + QY WL+K+L V RS TPWL
Sbjct: 102 RYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161
Query: 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL--- 244
+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAYERS RV N
Sbjct: 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 221
Query: 245 --------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSG 296
D PV+ITIGD GN +
Sbjct: 222 NGLCTPVKDQSAPVYITIGDAGNYGVID-------------------------------- 249
Query: 297 PAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 354
QP+YSAFRE+SFGHG+ ++KN T A ++W+RNQD D ++ +
Sbjct: 250 ----SNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR 303
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 78.3 bits (191), Expect = 6e-17
Identities = 56/306 (18%), Positives = 85/306 (27%), Gaps = 64/306 (20%)
Query: 21 RIAIVGDLGLTYNTTCT-----------INHMSSNEPDLVLLVGDVTYANLYLTNGTGSD 69
R VGD G N + + D +L +GD Y
Sbjct: 6 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV-------- 57
Query: 70 CYSCSFSKTPIHETYQPRWDYWGR--FMQNLVSKVPIMVVEGNHEIEAQAGNQT-FVAYS 126
H+ R+ F + VP V+ GNH+ Q + S
Sbjct: 58 -----------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKIS 106
Query: 127 SRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH-----------------QY 169
R+ FPS F + + ML S Q
Sbjct: 107 KRWNFPSPYYRL--RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 164
Query: 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229
W++K LA LVA +P W + + C+ ++ LL ++ V GH
Sbjct: 165 AWIKKQLAAAKE--DYVLVAGHYPVWSIA---EHGPTHCLVKQLLPLLTTHKVTAYLCGH 219
Query: 230 VHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFC 289
H + D G + G G ++ P + +GGF
Sbjct: 220 DHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 272
Query: 290 ATNFTS 295
T
Sbjct: 273 YVEITP 278
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 50.5 bits (119), Expect = 8e-08
Identities = 23/218 (10%), Positives = 68/218 (31%), Gaps = 5/218 (2%)
Query: 19 PKRIAIVGDLGLTYNTTCTI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 77
P+++ + + ++ + ++ +PD++++VG++ + ++
Sbjct: 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 61
Query: 78 TPIHETYQPRWDYWGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 136
IHE + +F + + V VV G ++ + + + +
Sbjct: 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLH 121
Query: 137 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPW---LVATWHP 193
+ + F G ++ D +W + + + P + P
Sbjct: 122 EGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPP 181
Query: 194 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231
+ + ++ S ++ GHV
Sbjct: 182 IGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 49.0 bits (115), Expect = 4e-07
Identities = 25/232 (10%), Positives = 56/232 (24%), Gaps = 32/232 (13%)
Query: 38 INHMSSNEPDLVLLVGDVTYAN--------------------------LYLTNGTGSDCY 71
+ V+ +GD+ + N +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 72 SCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF 131
S + ++ + D + + + + A + + +
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 132 PSEESGSLSSFYYSFNAGGIHFIMLG-----AYISYDKSGHQYKWLEKDLANVDRSVTPW 186
+ L+ ++ + + +G + S Q +WL+ L D
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 238
L+ H P + + A + L V GH H R
Sbjct: 222 LIF-SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD 272
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 43.3 bits (100), Expect = 2e-05
Identities = 27/196 (13%), Positives = 51/196 (26%), Gaps = 35/196 (17%)
Query: 45 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 104
PD ++ GD+ E R +
Sbjct: 45 RPDAIVFTGDLAD----------------------KGEPAAYRKLRGLVEPFAAQLGAEL 82
Query: 105 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 164
+ V GNH+ + F +E+ S++ G+ I+L +
Sbjct: 83 VWVMGNHD-----------DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 131
Query: 165 SGH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV 222
G + + ++A HPP S + + +L V
Sbjct: 132 HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDV 191
Query: 223 DIVFNGHVHAYERSNR 238
+ GH+H +
Sbjct: 192 RAILAGHLHYSTNATF 207
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 16/160 (10%), Positives = 44/160 (27%), Gaps = 11/160 (6%)
Query: 83 TYQPRWDYWGRFMQ-NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSS 141
R + + Q P+ ++ GNH+ +A + + ++
Sbjct: 52 VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKA-------LFLEYLQPLCPQLGSDANN 104
Query: 142 FYYSFNAGGIHFIMLGAYISYDKSGH-QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS 200
+ + + + + + G + + A + H P +
Sbjct: 105 MRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN 164
Query: 201 SHYREAECM--RVEMEALLYSYGVDIVFNGHVHAYERSNR 238
+ C + + + +F GH H+ +
Sbjct: 165 AQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY 204
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 38.9 bits (89), Expect = 4e-04
Identities = 21/220 (9%), Positives = 44/220 (20%), Gaps = 33/220 (15%)
Query: 19 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 77
+ I + G + D + L+G++
Sbjct: 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLM--------------------- 43
Query: 78 TPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF--PSEE 135
DY F + +P V G + + E
Sbjct: 44 ----PKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHE 99
Query: 136 SGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 195
+ + Y G G ++ + E L + + +H
Sbjct: 100 TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159
Query: 196 YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235
Y + E + + +V
Sbjct: 160 YHKGLNEQGSHEVAHLIKT-----HNPLLVLVAGKGQKHE 194
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.92 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.91 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.9 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.78 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.76 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.53 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.53 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.4 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.36 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.33 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.27 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.08 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.92 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.81 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.45 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.26 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.38 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.73 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.62 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.17 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 95.02 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 94.24 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 94.16 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 93.19 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=4.1e-57 Score=421.93 Aligned_cols=281 Identities=43% Similarity=0.811 Sum_probs=238.0
Q ss_pred CCeEEEEEecCCCCCChHHHHHHHH--hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 18 YPKRIAIVGDLGLTYNTTCTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~~~~l~~l~--~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
.|+||+++||+|.......++..+. ..+|||||++||++|+++.. .....+|+.|.+.+
T Consensus 6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~-------------------~~~~~~wd~~~~~~ 66 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYP-------------------NHDNVRWDTWGRFT 66 (312)
T ss_dssp CCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSG-------------------GGCTHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCc-------------------ccchHHHHHHHHHH
Confidence 4899999999998766666666543 46899999999999976431 12246899999999
Q ss_pred hhhhcCCCeEEecCCCCcCCCC---CCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 172 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL 172 (373)
+++...+|+++++||||+.... ..+.+..|..+|.+|.+......+.||+|++|+++||+||++.......+|++||
T Consensus 67 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL 146 (312)
T d2qfra2 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWL 146 (312)
T ss_dssp HHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHH
T ss_pred HHHhhcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHH
Confidence 9998889999999999975431 2356778888999998876677788999999999999999998888889999999
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCcc--------
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-------- 244 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~-------- 244 (373)
+++|++++++++||+||++|+|+|++..........+++.|++||.+++|+++|+||.|.|||++|+++.++
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~ 226 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 226 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCS
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccc
Confidence 999999988889999999999999987655556677899999999999999999999999999999987653
Q ss_pred ---CCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeE
Q 017367 245 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 321 (373)
Q Consensus 245 ---~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~ 321 (373)
++.|++||++|+||+.++... ++ ..++|.|+++|..+|||+
T Consensus 227 ~~~~~~g~vyiv~G~gG~~~~~~~--------------------------~~----------~~~~~~~s~~~~~~~G~~ 270 (312)
T d2qfra2 227 PVKDQSAPVYITIGDAGNYGVIDS--------------------------NM----------IQPQPEYSAFREASFGHG 270 (312)
T ss_dssp CEECTTSCEEEEECCSCTTSCCCC--------------------------CB----------CSSCCTTEEEEECCCEEE
T ss_pred cccCCCcCEEEEECcCCCcccccc--------------------------cc----------cCCCCCeeEEEecCCCEE
Confidence 467999999999998654321 01 146788999999999999
Q ss_pred EEEEecCCeEEEEEEEecCCCceee--EEEEEEeCC
Q 017367 322 ILEVKNETWALWTWHRNQDSNNKVG--DQIYIVRQP 355 (373)
Q Consensus 322 ~l~v~~~t~l~~~~~~~~~~~~~v~--d~~~i~k~~ 355 (373)
+|+|.|+|+|.|+|+++.|+ +|+ |+|||+|+.
T Consensus 271 ~l~v~n~t~l~~~~~~~~d~--~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 271 MFDIKNRTHAHFSWNRNQDG--VAVEADSVWFFNRH 304 (312)
T ss_dssp EEEECSSSEEEEEEEESSSC--TTCCSEEEEEECTT
T ss_pred EEEEEcCCeEEEEEEECCCC--CEEeeeEEEEEeCC
Confidence 99999999999999999988 665 999999996
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.7e-33 Score=259.23 Aligned_cols=259 Identities=20% Similarity=0.278 Sum_probs=174.5
Q ss_pred CeEEEEEecCCCCCCh-----------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHH
Q 017367 19 PKRIAIVGDLGLTYNT-----------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 87 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-----------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 87 (373)
++||+++||+|..... ..+.+.+++.+|||||++||++|.++ . ...++.+
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g-----~--------------~~~~~~~ 64 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTG-----V--------------HDAKDKR 64 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTC-----C--------------SSTTCTH
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCC-----C--------------CcccHHH
Confidence 5999999999865432 12233444579999999999998643 2 1122334
Q ss_pred HHHHHH-HHhh-hhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCCCCCcceEEEEe------CCEEEEEEcc
Q 017367 88 WDYWGR-FMQN-LVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIMLGA 158 (373)
Q Consensus 88 ~~~~~~-~l~~-l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~~~fi~ldt 158 (373)
|..... .+.. +..++|+++++||||+..+... ..+..+..++.+| ..||++.+ +.++|+++|+
T Consensus 65 ~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt 136 (302)
T d1utea_ 65 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 136 (302)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHhhhhhhcCCceEEeecccccccccccccchhhccccccCC--------CcccceeecccCCCCcEEEEEccc
Confidence 544222 2222 2568999999999998643211 1122233333333 24677664 3699999997
Q ss_pred cccC-----------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcC
Q 017367 159 YISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG 221 (373)
Q Consensus 159 ~~~~-----------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~ 221 (373)
.... ....+|++||++.|++.. .+|+|+++|+|+++.... ......+..|.++|.+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~~---~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~ 211 (302)
T d1utea_ 137 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 211 (302)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred eeEeecccccccccccccccchhHHHHHHHHHHHHHhhc---cCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcC
Confidence 4210 024789999999999853 468999999999876432 334567889999999999
Q ss_pred ccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCC
Q 017367 222 VDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 301 (373)
Q Consensus 222 v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
|+++||||.|.|+|.. .++++.||++|+||......... . ...
T Consensus 212 v~~~~~GH~H~~~r~~-------~~~~~~~i~~g~g~~~~~~~~~~---------------------~--~~~------- 254 (302)
T d1utea_ 212 VTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHL---------------------R--KVP------- 254 (302)
T ss_dssp CSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCCCCCTTG---------------------G--GSC-------
T ss_pred ceEEEeCCCcceEEEe-------cCCccEEEEeCCCCCCCCCcccc---------------------c--cCC-------
Confidence 9999999999999986 46789999999988754221100 0 000
Q ss_pred cccCCCCCcc-ccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEe
Q 017367 302 FCWDRQPDYS-AFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 353 (373)
Q Consensus 302 ~~~~~~~~~~-~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k 353 (373)
...+.+. ......+||++++| +++.|+++|+.. +| +++|++.|.+
T Consensus 255 ---~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~~-~G--~~~~~~~~~~ 300 (302)
T d1utea_ 255 ---NGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPR 300 (302)
T ss_dssp ---TTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECC
T ss_pred ---CcccceeecccCCcceEEEEEE-ECCEEEEEEEeC-CC--CEEEEEEecC
Confidence 0111221 22346789999999 778999999853 56 9999999864
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=1.8e-24 Score=194.69 Aligned_cols=193 Identities=15% Similarity=0.201 Sum_probs=128.6
Q ss_pred CeEEEEEecCCCCCC-------------hHHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 19 PKRIAIVGDLGLTYN-------------TTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-------------~~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
.+||++|||+|+... ..++++.+.+ .+|||||++||++. .|.
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~------~g~----------------- 60 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD------KGE----------------- 60 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS------SCC-----------------
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC------CCC-----------------
Confidence 599999999997432 1335556554 48999999999994 233
Q ss_pred chHHHHHHHHHHhhh--hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc
Q 017367 84 YQPRWDYWGRFMQNL--VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS 161 (373)
Q Consensus 84 y~~~~~~~~~~l~~l--~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~ 161 (373)
..+++.+.+.++++ ..++|+++++||||.. ..+..+... .. ......+|++..++++|++|||...
T Consensus 61 -~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~-----~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~ldt~~~ 128 (256)
T d2hy1a1 61 -PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLD---EA---PSMAPLDRVCMIDGLRIIVLDTSVP 128 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHTTC---CC---CCCSCCCEEEEETTEEEEECCCBCT
T ss_pred -hhHHHHHHHHhhhhhhhcCCCEEEEcccccch-----hhhhhhhcc---cc---ccccccceEEEecccceeeeeeeec
Confidence 23344555555443 1278999999999952 222222211 11 1234567889999999999998654
Q ss_pred C----CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 162 Y----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 162 ~----~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
. ....+|++||++.|++... .+ +||++|+|++......... .....+.+.+++++++|+++||||+|.....
T Consensus 129 ~~~~g~~~~~~~~wl~~~L~~~~~--~~-~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~ 205 (256)
T d2hy1a1 129 GHHHGEIRASQLGWLAEELATPAP--DG-TILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 205 (256)
T ss_dssp TCSSBCCCHHHHHHHHHHHTSCCT--TC-EEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred CCcCCcccHHHHHHHHHHHHhhhc--cC-ceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce
Confidence 3 3468999999999987642 23 6777888876543211100 0012467889999999999999999986654
Q ss_pred eecccCccCCCCCEEEEeCCC
Q 017367 237 NRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~g 257 (373)
. -+|+.++++|+.
T Consensus 206 ~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 206 T--------FVGIPVSVASAT 218 (256)
T ss_dssp E--------ETTEEEEECCCC
T ss_pred E--------ECCEEEEEcCCc
Confidence 2 358888877653
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.91 E-value=4.3e-23 Score=187.23 Aligned_cols=193 Identities=16% Similarity=0.266 Sum_probs=128.5
Q ss_pred eEEEEEecCCCCCC---------h----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 20 KRIAIVGDLGLTYN---------T----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 20 ~r~~~igD~h~~~~---------~----~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
+||++|||+|+... . .++++.+.+ .+||+||++||+++ .|.
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~------~~~------------------ 56 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN------CGR------------------ 56 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS------SCC------------------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc------CCc------------------
Confidence 58999999996421 1 345566654 48999999999994 233
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC--
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-- 162 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~-- 162 (373)
...++.+.+.++++ ++|+++++||||.. ..+..+...+. +.. ........|.++.++++||+|||....
T Consensus 57 ~~~y~~~~~~l~~l--~~p~~~i~GNHD~~-----~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ldt~~~~~~ 127 (271)
T d3d03a1 57 PEEYQVARQILGSL--NYPLYLIPGNHDDK-----ALFLEYLQPLC-PQL-GSDANNMRCAVDDFATRLLFIDSSRAGTS 127 (271)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCH-----HHHHHHHGGGS-GGG-CSCGGGCCEEECSSSSEEEECCCCCTTCS
T ss_pred chhHHHHHHHHhcc--CCCEEEEecCccch-----HHHHHHhhhhh-hcc-ccccCcceEEEecCCeEEEecccccCCCC
Confidence 23456667777776 79999999999974 12222221111 000 012234567788889999999996542
Q ss_pred --CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeeeee
Q 017367 163 --DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNR 238 (373)
Q Consensus 163 --~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p 238 (373)
....+|++||+++|++.. +.+ +||++|||++......... .....++|.++|+++ +|+++||||+|......
T Consensus 128 ~~~l~~~ql~wL~~~L~~~~--~~~-~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~- 203 (271)
T d3d03a1 128 KGWLTDETISWLEAQLFEGG--DKP-ATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ- 203 (271)
T ss_dssp SBCCCHHHHHHHHHHHHHHT--TSC-EEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE-
T ss_pred cceecHHHHHHHHHHHhhhc--cce-eEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE-
Confidence 357899999999999864 334 5666677766544332211 112246788999998 69999999999866653
Q ss_pred cccCccCCCCCEEEEeCC
Q 017367 239 VFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 239 ~~~~~~~~~g~~yi~~G~ 256 (373)
-+|+.++++.+
T Consensus 204 -------~~g~~~~~~ps 214 (271)
T d3d03a1 204 -------YRQALISTLPG 214 (271)
T ss_dssp -------ETTEEEEECCC
T ss_pred -------ECCEEEEEcCC
Confidence 35777766544
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.90 E-value=2.4e-23 Score=190.44 Aligned_cols=208 Identities=19% Similarity=0.155 Sum_probs=131.4
Q ss_pred eEEEEEecCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 20 KRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 20 ~r~~~igD~h~~~~--------------------~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
|||+++||+|.+.. ..++++.+++.+|||||++||++.....
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~------------------ 65 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNR------------------ 65 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHH------------------
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCc------------------
Confidence 99999999996521 1245667778899999999999953210
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhc---cc--CCCCCCCCCCCcceEEEEeCCEEEE
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RF--AFPSEESGSLSSFYYSFNAGGIHFI 154 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~---~~--~~p~~~~~~~~~~~ys~~~g~~~fi 154 (373)
..+.....|+.+.+.++.+ ++|+++++||||............... ++ ..............+....++++|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (320)
T d2nxfa1 66 RRDASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFV 143 (320)
T ss_dssp HTTCHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEE
T ss_pred chhHHHHHHHHHHHHHHHc--CCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEE
Confidence 0111122344444444444 899999999999753211000000000 00 0000000112234456788999999
Q ss_pred EEccccc----------------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEE
Q 017367 155 MLGAYIS----------------------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLV 188 (373)
Q Consensus 155 ~ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~iI 188 (373)
.+++... ...+.+|++||+++|+++.+.. .++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~-~~vi 222 (320)
T d2nxfa1 144 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ-ERVL 222 (320)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred EecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcC-CceE
Confidence 9986311 0125889999999999875444 3589
Q ss_pred EEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEEEEeCC
Q 017367 189 ATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 189 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
+++|+|++....... ......+++.++|.++ +|+++|+||+|..++.. ..+|+.||++|+
T Consensus 223 v~~H~p~~~~~~~~~-~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------~~~g~~~i~~~~ 283 (320)
T d2nxfa1 223 IFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEG 283 (320)
T ss_dssp EEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCC
T ss_pred EEECCCCccCCCCCc-cchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------ccCCCEEEECCe
Confidence 999999876543321 1112356788999998 59999999999887654 467899998765
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=3.3e-18 Score=149.30 Aligned_cols=178 Identities=12% Similarity=0.067 Sum_probs=111.7
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+-+|+++||+|....+ +++++.+.+.++|+||++||++.. +.. ..++..+.+.+.+
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~------~~~-----------------~~~~~~~~~~L~~ 61 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------Ccc-----------------chHHHHhhhhhcc
Confidence 4689999999976544 455666667799999999999942 220 1234445555555
Q ss_pred hhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC----------CCChH
Q 017367 98 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY----------DKSGH 167 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~----------~~~~~ 167 (373)
+ ++|+++|+||||..... .....+......+.. ......+.+..+++.++.++..... .....
T Consensus 62 ~--~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T d1uf3a_ 62 A--HLPTAYVPGPQDAPIWE--YLREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp G--CSCEEEECCTTSCSHHH--HHHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred c--cceEEEEecCCCchhhh--hhhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHH
Confidence 5 88999999999974210 000001100000000 0112235677788888888764321 12467
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 168 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 168 Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
+..|+++.++.... . ..|+++|.|++........ ...+.++++++++++++|||+|..+
T Consensus 135 ~~~~l~~~l~~~~~--~-~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~~ 193 (228)
T d1uf3a_ 135 VAEYRLKALWELKD--Y-PKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp HHHHHHGGGGGSCS--C-CEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCEE
T ss_pred HHHHHHHHHhhccC--C-ceEEEEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccch
Confidence 88999888877542 2 3688888887654432221 2456778889999999999999754
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.76 E-value=8.6e-18 Score=149.07 Aligned_cols=204 Identities=13% Similarity=0.205 Sum_probs=107.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc----hHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY----QPRWDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y----~~~~~~~~~ 93 (373)
|.||+++||+|..... .+.++.+.+.+||+||++||+++.......... .+..... +....+ ......+..
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~n~d~~~~~~ 77 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYER-AHLARRE---PNRKVIHENEHYIIETLDK 77 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHH-HHHTTCC---CCTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHH-HHHhhhh---hceeeeccccccchhhHHH
Confidence 5899999999977654 456666777899999999999953100000000 0000000 000000 000122334
Q ss_pred HHhhh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC---------
Q 017367 94 FMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD--------- 163 (373)
Q Consensus 94 ~l~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~--------- 163 (373)
+++.| ..++|+++++||||..... .....+......+.. ......+.+..+++.|+.+++.....
T Consensus 78 ~~~~L~~~~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T d2yvta1 78 FFREIGELGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 152 (257)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHHHHHhcCCcEEEEeCCCcchhhH--HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccchhhhh
Confidence 44455 3479999999999964210 011111111111100 01112234445778888887643211
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc--hHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 164 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 164 ~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
....+..|++..++.. +....|+++|+|++.+....... .......+.+++++++++++++||+|..+
T Consensus 153 ~~~~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~ 222 (257)
T d2yvta1 153 YPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH 222 (257)
T ss_dssp EEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred hhhhHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCe
Confidence 1123344444444442 23357888999887543221111 11123668889999999999999999754
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.53 E-value=6.1e-13 Score=112.07 Aligned_cols=134 Identities=16% Similarity=0.304 Sum_probs=84.4
Q ss_pred eEEEEEecCCCCCCh---HHHHHHH-HhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT---TCTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---~~~l~~l-~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+||+++||+|..... .+.+.++ ...++|.|+++||++. ....+.+
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~-------------------------------~e~l~~l 49 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------------------------KESYDYL 49 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------------------------HHHHHHH
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc-------------------------------hhhHHHH
Confidence 589999999965432 2334343 3457999999999982 1123445
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 175 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~ 175 (373)
+.+ ..|+++|.||||.... .|. .-.+++++
T Consensus 50 ~~~--~~~v~~V~GN~D~~~~--------------~p~---------~~~~~~~g------------------------- 79 (182)
T d1z2wa1 50 KTL--AGDVHIVRGDFDENLN--------------YPE---------QKVVTVGQ------------------------- 79 (182)
T ss_dssp HHH--CSEEEECCCTTCCCTT--------------SCS---------EEEEEETT-------------------------
T ss_pred Hhh--CCceEEEeCCcCcccc--------------cce---------EEEEEEcC-------------------------
Confidence 554 5589999999996421 111 01122222
Q ss_pred HhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeC
Q 017367 176 LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 255 (373)
Q Consensus 176 L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G 255 (373)
+.|.+.|...+.... . .+.+..+++..++|++|+||+|...... -+++++|..|
T Consensus 80 ----------~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPG 133 (182)
T d1z2wa1 80 ----------FKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPG 133 (182)
T ss_dssp ----------EEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECC
T ss_pred ----------cEEEEEeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCC
Confidence 245566655443211 1 1455667777899999999999865442 4688999999
Q ss_pred CCCCc
Q 017367 256 DGGNL 260 (373)
Q Consensus 256 ~gG~~ 260 (373)
+.|..
T Consensus 134 Sv~~p 138 (182)
T d1z2wa1 134 SATGA 138 (182)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87764
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.53 E-value=9.6e-13 Score=112.03 Aligned_cols=142 Identities=17% Similarity=0.327 Sum_probs=85.3
Q ss_pred EEEEEecCCCCCCh---HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 21 RIAIVGDLGLTYNT---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 21 r~~~igD~h~~~~~---~~~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
=|+++||+|..... ...+.+ +...++|.||++||++.. ...+.++
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~-------------------------------~~l~~l~ 53 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEMLK 53 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHHHH
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH-------------------------------HHHHHHH
Confidence 48999999964322 223334 445689999999999821 1234455
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 176 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L 176 (373)
.+ ..++++|.||||....... ..+... .| ..-.+.+++.
T Consensus 54 ~l--~~~v~~V~GN~D~~~~~~~---~~~~~~--lp---------~~~~~~~~~~------------------------- 92 (193)
T d2a22a1 54 NI--TKNVYIVSGDLDSAIFNPD---PESNGV--FP---------EYVVVQIGEF------------------------- 92 (193)
T ss_dssp HH--CSCEEECCCTTCCSCCBCC---GGGTBC--CC---------SEEEEEETTE-------------------------
T ss_pred hh--CCCEEEEcCCCCcchhhhh---HHHHhh--CC---------ccEEEEECCE-------------------------
Confidence 55 4578999999997532111 111111 11 1223334433
Q ss_pred hhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCC
Q 017367 177 ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 177 ~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
.|.+.|...+.... . .+.+.+++.+.+++++++||+|...... -+|+++|..|+
T Consensus 93 ----------~i~l~H~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGS 146 (193)
T d2a22a1 93 ----------KIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGT 146 (193)
T ss_dssp ----------EEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCC
T ss_pred ----------EEEEEeccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCC
Confidence 34444533222111 1 2456677788899999999999865542 46889999998
Q ss_pred CCCc
Q 017367 257 GGNL 260 (373)
Q Consensus 257 gG~~ 260 (373)
.|..
T Consensus 147 vg~p 150 (193)
T d2a22a1 147 ATGA 150 (193)
T ss_dssp SSCC
T ss_pred CCcC
Confidence 7754
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.40 E-value=1.1e-12 Score=108.79 Aligned_cols=141 Identities=17% Similarity=0.135 Sum_probs=85.4
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~-~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|.... ..++++.+.+.++|.|+++||++.. + ....+..+
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~--------------------------~-----~~~~l~~~ 49 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------------------------F-----VIKEFENL 49 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------------------------H-----HHHHGGGC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH--------------------------H-----HHHHHhhc
Confidence 59999999996533 3567777788899999999999931 0 11222333
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhh
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 178 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~ 178 (373)
..|++.+.||||.... ............ ..-+....+.+++
T Consensus 50 --~~~~~~v~GN~D~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~---------------------------- 90 (165)
T d1s3la_ 50 --NANIIATYGNNDGERC----KLKEWLKDINEE-----NIIDDFISVEIDD---------------------------- 90 (165)
T ss_dssp --SSEEEEECCTTCCCHH----HHHHHHHHHCTT-----CEEESEEEEEETT----------------------------
T ss_pred --CccEEEEcccccccch----hhhHhhhhhccc-----ccCChhhceEECC----------------------------
Confidence 6799999999997421 000000000000 0000111122111
Q ss_pred ccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 017367 179 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 179 ~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG 258 (373)
..|++.|.+.+ ..+..+++..+++++++||+|..... ..++++++..|+-|
T Consensus 91 -------~~i~l~Hg~~~--------------~~~~~~~~~~~~d~v~~GHtH~~~~~--------~~~~~~~iNPGSvg 141 (165)
T d1s3la_ 91 -------LKFFITHGHHQ--------------SVLEMAIKSGLYDVVIYGHTHERVFE--------EVDDVLVINPGECC 141 (165)
T ss_dssp -------EEEEEEESCCH--------------HHHHHHHHHSCCSEEEEECSSCCEEE--------EETTEEEEECCCSS
T ss_pred -------cEEEEEECCcc--------------cHHHHHhhcCCCCEEEECCcCcceEE--------EECCEEEEECCCCC
Confidence 24667775532 23455677789999999999984433 24688999988876
Q ss_pred C
Q 017367 259 N 259 (373)
Q Consensus 259 ~ 259 (373)
.
T Consensus 142 ~ 142 (165)
T d1s3la_ 142 G 142 (165)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.36 E-value=3.4e-11 Score=100.35 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=32.6
Q ss_pred HHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCc
Q 017367 212 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 212 ~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~ 260 (373)
.+..++...+++++++||+|...... .+++++|..|+-|..
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQP 133 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSC
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 45666777899999999999865542 468999999998764
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.33 E-value=2.6e-12 Score=117.58 Aligned_cols=74 Identities=20% Similarity=0.361 Sum_probs=50.3
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
+||+++||+|++... .++++.+.+.++|+||++||++.. +. +. .
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~------~~------------~~----~ 58 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS------SR------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS------SS------------CC----H
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----H
Confidence 599999999986431 123444456899999999999942 11 00 1
Q ss_pred HHHHHHHHHHhhh-hcCCCeEEecCCCCcCC
Q 017367 86 PRWDYWGRFMQNL-VSKVPIMVVEGNHEIEA 115 (373)
Q Consensus 86 ~~~~~~~~~l~~l-~~~~P~~~v~GNHD~~~ 115 (373)
.....+.+.++.+ ..++|+++++||||...
T Consensus 59 ~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred HHHHHHHHHHhhHHhcCCcEEEeCCCCcccc
Confidence 1233455556666 34799999999999854
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.27 E-value=2e-12 Score=113.74 Aligned_cols=190 Identities=8% Similarity=-0.001 Sum_probs=93.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~-----~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
++|++|||+|..... .++++.+.. .++|.||++||++. .|. .-....+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd------~G~--------------------~~~evi~ 54 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVG------LFP--------------------YPKEVIE 54 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSS------SSS--------------------CHHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCC------CCC--------------------CcHHHHH
Confidence 589999999964332 345555532 35699999999994 222 1123445
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 173 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~ 173 (373)
.+..+..+.++++|+||||.... .+......+.. ...... .+... ............++++||+
T Consensus 55 ~l~~l~~~~~v~~v~GNHD~~~~-------~~~~~~~~~~~----~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~l~ 118 (251)
T d1nnwa_ 55 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHATDPGY----IDKLEL---PGHVK--KALKFTWEKLGHEGREYLR 118 (251)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCSSSGG----GGGSSC---CHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCEEEEeccHHHHHH-------hccccccccch----hhhhcc---chhHH--HhhHHHhhhcCHHHHHHHH
Confidence 55555445689999999995310 00000000000 000000 00000 0000000012345556655
Q ss_pred HHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEEE
Q 017367 174 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 252 (373)
Q Consensus 174 ~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi 252 (373)
+...........-.+++.|.++........... .....+...+... +++++|+||+|.-... ..++..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~--------~~~~~~~i 189 (251)
T d1nnwa_ 119 DLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDA--------MTRYGRVV 189 (251)
T ss_dssp TSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEE--------EETTEEEE
T ss_pred hcccceEEeeCCCcEEEEecCccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEE--------Eeeeeecc
Confidence 433322111111245666766544322211111 1122233344444 6899999999975544 24678889
Q ss_pred EeCCCCCc
Q 017367 253 TIGDGGNL 260 (373)
Q Consensus 253 ~~G~gG~~ 260 (373)
..|+-|..
T Consensus 190 n~Gsvg~~ 197 (251)
T d1nnwa_ 190 CPGSVGFP 197 (251)
T ss_dssp EECCSSSC
T ss_pred cccccccc
Confidence 99988764
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=5.3e-10 Score=93.60 Aligned_cols=75 Identities=15% Similarity=0.263 Sum_probs=47.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|..... +++++.+.+.++|.||++||++.. |... .....+ ........+..+
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~------g~~~----------~~~~~~--~~~~~~~~~~~~ 63 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGY--APAKVVERLNEV 63 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTB--CHHHHHHHHHTT
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCccccc------Cccc----------hhhhcc--CcHHHHHHHHhc
Confidence 699999999954332 456666667799999999999942 1100 001111 111223333333
Q ss_pred hcCCCeEEecCCCCcC
Q 017367 99 VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~ 114 (373)
+.+++.+.||||..
T Consensus 64 --~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 64 --AHKVIAVRGNCDSE 77 (184)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCcEEEecCCCCch
Confidence 56899999999973
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.92 E-value=7.6e-09 Score=86.86 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=32.8
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.|+++|.|+........ ......+..+..+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCcccccccc---ccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 68999999865433221 2234567788889999999999999643
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=1.5e-07 Score=86.13 Aligned_cols=187 Identities=16% Similarity=0.122 Sum_probs=95.2
Q ss_pred CCeEEEEEecCCCCCC-----------hHHHHHHHH----hCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 18 YPKRIAIVGDLGLTYN-----------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------~~~~l~~l~----~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
..++|++++|+|.... ....++++. +.+++ ++|.+||++.+..+.
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s------------------- 67 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPES------------------- 67 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHH-------------------
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHH-------------------
Confidence 3589999999995321 112344443 35666 556699999542210
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC--------CCCCcceEEEEeCCEEE
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES--------GSLSSFYYSFNAGGIHF 153 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~ys~~~g~~~f 153 (373)
..+ ......+.|..+ +.- ..++||||+... ...+..+......|--.. ...-..|.-++.+++++
T Consensus 68 ~~~--~g~~~~~~mn~~--g~D-a~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kV 140 (337)
T d1usha2 68 DLQ--DAEPDFRGMNLV--GYD-AMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (337)
T ss_dssp HTT--TTHHHHHHHHHH--TCC-EEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred HHh--CChHHHHHHHhc--CCe-EEEechhhhccc--hHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEE
Confidence 011 112344555655 333 467899998532 223333333333331110 01223556678898766
Q ss_pred --EEEcccccC-------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHH
Q 017367 154 --IMLGAYISY-------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 218 (373)
Q Consensus 154 --i~ldt~~~~-------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~ 218 (373)
|++-+.... ....+..+...+.|+++ .+...+|++.|.+............ ....+...+.
T Consensus 141 gviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~ 216 (337)
T d1usha2 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALP 216 (337)
T ss_dssp EEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSC
T ss_pred EeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCc
Confidence 555332100 01123333333445433 2456899999988654321110000 0123333444
Q ss_pred HcCccEEEecccccee
Q 017367 219 SYGVDIVFNGHVHAYE 234 (373)
Q Consensus 219 ~~~v~lvl~GH~H~~~ 234 (373)
..+||++|.||+|...
T Consensus 217 ~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 217 AGSLAMIVGGHSQDPV 232 (337)
T ss_dssp TTSSSEEECCSSCCBC
T ss_pred ccCceEEecCccCccc
Confidence 4589999999999743
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.45 E-value=6.4e-07 Score=81.30 Aligned_cols=182 Identities=18% Similarity=0.209 Sum_probs=87.4
Q ss_pred CeEEEEEecCCCCCC--------------hHHH---HHHH-HhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN--------------TTCT---INHM-SSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~--------------~~~~---l~~l-~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
.++|++.+|+|.... ..+. +++. .+.+++ ++|.+||++.+..+.+.-.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~------------- 77 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITS------------- 77 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSS-------------
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcc-------------
Confidence 599999999995321 1122 2222 235676 5667999996543211000
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCe-EEecCCCCcCCCCCC-cchhhhhcccCCCCCCC--------C---CCCcceEEE
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEES--------G---SLSSFYYSF 146 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~-~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~--------~---~~~~~~ys~ 146 (373)
..-....++|..+ ++ ..++||||+...... ..+....+.+..|--.. + .....|..+
T Consensus 78 ------~~G~~~~~~mn~l----gyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~ 147 (322)
T d3c9fa2 78 ------PNGLKSTPIFIKQ----DYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYF 147 (322)
T ss_dssp ------STTTTTHHHHTTS----CCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEE
T ss_pred ------cCChHHHHHHhcc----CCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEE
Confidence 0001123344443 44 678899998532110 11122222233332111 0 122345556
Q ss_pred EeC--CEEEEEEcccccCCC--------ChH---HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHH
Q 017367 147 NAG--GIHFIMLGAYISYDK--------SGH---QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 213 (373)
Q Consensus 147 ~~g--~~~fi~ldt~~~~~~--------~~~---Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l 213 (373)
..+ ++.++++.+...... ... +..|+++.++ .+...+|++.|.++.... .........+
T Consensus 148 ~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~----~~~~~~~~~l 219 (322)
T d3c9fa2 148 TTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW----GEFYQVHQYL 219 (322)
T ss_dssp ECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT----CHHHHHHHHH
T ss_pred EECCCcEEEEEEeeccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc----cccchHHHHH
Confidence 665 588888765432211 111 1134443332 356789999998764321 1111112222
Q ss_pred HHHHHHcCccEEEeccccc
Q 017367 214 EALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 214 ~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+. ..++++|.||+|.
T Consensus 220 a~~~~-~~~~~iigGHsH~ 237 (322)
T d3c9fa2 220 RQFFP-DTIIQYFGGHSHI 237 (322)
T ss_dssp HHHCT-TSEEEEEECSSCC
T ss_pred HHhCC-CCCEEEecccccc
Confidence 22221 1345699999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.26 E-value=8.2e-06 Score=73.07 Aligned_cols=173 Identities=19% Similarity=0.192 Sum_probs=91.3
Q ss_pred CeEEEEEecCCCCCC------------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN------------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~------------------~~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
.++|++.+|+|.... ....++++.+..+ -++|-+||++.++.+.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~----------------- 64 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF----------------- 64 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH-----------------
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhH-----------------
Confidence 379999999995431 1234566554444 5788999999543210
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC----------CCCCcceEEEEeC
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES----------GSLSSFYYSFNAG 149 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~----------~~~~~~~ys~~~g 149 (373)
..+ ......+.|..+ + .=..++||||+... ...+..+.....+|--.. ...-..|..++.+
T Consensus 65 --~~~--~g~~~~~~~n~~--g-yDa~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~ 135 (302)
T d2z1aa2 65 --NQY--RGLADRYFMHRL--R-YRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVG 135 (302)
T ss_dssp --HHH--TTHHHHHHHHHT--T-CCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEET
T ss_pred --hhh--cchhHHHHHHhc--c-cccccccchhhhcC--hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEEC
Confidence 000 112233444444 2 23689999999642 222333222222221110 0112346678889
Q ss_pred CEEEEEEc--ccc-----------cCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHH
Q 017367 150 GIHFIMLG--AYI-----------SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEAL 216 (373)
Q Consensus 150 ~~~fi~ld--t~~-----------~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~l 216 (373)
++++-++. +.. .+....+..++..+.|++ .+.+.+|++.|.... . -.++
T Consensus 136 g~kIgiiG~~t~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~--------~-------d~~l 197 (302)
T d2z1aa2 136 GERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG--------E-------DLKL 197 (302)
T ss_dssp TEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------H-------HHHH
T ss_pred CeEEEEEecccccccccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc--------h-------hhHH
Confidence 87765554 210 001123334444444443 345679999997531 0 1123
Q ss_pred HHHc-CccEEEeccccceee
Q 017367 217 LYSY-GVDIVFNGHVHAYER 235 (373)
Q Consensus 217 l~~~-~v~lvl~GH~H~~~r 235 (373)
.++. ++|++++||+|....
T Consensus 198 a~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 198 ARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp HTTCSSCCEEEECSSCCCBS
T ss_pred HhcCCCeeeeecCccceeec
Confidence 3334 799999999997443
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.38 E-value=5.9e-05 Score=63.71 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=27.9
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y 57 (373)
||.++||+|..... .++++++.. ...|.++++||++.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vD 52 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 89999999976443 455666542 46689999999994
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.73 E-value=0.016 Score=48.91 Aligned_cols=188 Identities=14% Similarity=0.142 Sum_probs=103.0
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+||+++||+=..... .+.|..|. .+.||||..|..+-. + .|.. + +.+.++++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~-G---~Git-----------------~---~~~~~l~~ 55 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAG-G---FGMH-----------------R---DAARGALE 55 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTT-T---SSCC-----------------H---HHHHHHHH
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCCC-C---cCCC-----------------H---HHHHHHHH
Confidence 589999998432211 23445553 468999999999842 1 1221 1 12222222
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhh---cccCCCCCC--CCCCCcceEEEEeCCEEEEEEcc--cccCCCChHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYS---SRFAFPSEE--SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQY 169 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~---~~~~~p~~~--~~~~~~~~ys~~~g~~~fi~ldt--~~~~~~~~~Q~ 169 (373)
.++-+ .+.|||=+.. .+.+.... .+...|.+- ....+..|+.++..+.++.++|- .........-+
T Consensus 56 ---~GvDv-iT~GNH~wdk---kei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF 128 (255)
T d1t70a_ 56 ---AGAGC-LTLGNHAWHH---KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPF 128 (255)
T ss_dssp ---HTCSE-EECCTTTTSS---TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHH
T ss_pred ---cCCcE-EEcCchhhcc---hhHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHH
Confidence 25664 7899997742 22222221 123334332 23456778888888877777664 22222222334
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCC
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
+-+++.|++ .+.+.+||=+|.=.. .+. .+| -..-+.+|.+|+-=|+|.-. ....+-|+|+
T Consensus 129 ~~~d~~l~~---~~~~~i~VDfHaEaT---------SEK--~A~-g~~ldGrvsav~GTHTHV~T-----aD~rIlp~GT 188 (255)
T d1t70a_ 129 RTMDALLER---DDLGTVFVDFHAEAT---------SEK--EAM-GWHLAGRVAAVIGTHTHVPT-----ADTRILKGGT 188 (255)
T ss_dssp HHHHHHTTC---SSCCEEEEEEECSCH---------HHH--HHH-HHHHTTSSSEEEEESSCSCB-----SCCEEETTTE
T ss_pred HHHHHHHhh---cCCCeEEEEccchhH---------HHH--HHH-HhhhcCcEEEEEecCccccc-----ccceEecCCc
Confidence 445555654 244568888884211 111 222 33445589999999999632 2222247889
Q ss_pred EEEE-eCCCCC
Q 017367 250 VHIT-IGDGGN 259 (373)
Q Consensus 250 ~yi~-~G~gG~ 259 (373)
-|++ .|..|.
T Consensus 189 ay~TDvGMtG~ 199 (255)
T d1t70a_ 189 AYQTDAGFTGP 199 (255)
T ss_dssp EEESCCCCBEE
T ss_pred EEEecCccccc
Confidence 8876 344444
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.62 E-value=0.042 Score=46.04 Aligned_cols=187 Identities=18% Similarity=0.273 Sum_probs=101.8
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+||+++||+=..... ...+..|. .+.||||..|..+-. + .|.. + +.+.+++
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~-G---~Git-----------------~---k~~~~L~- 54 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRYDLVIANGENAAR-G---KGLD-----------------R---RSYRLLR- 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGCSEEEEECTTTTT-T---SSCC-----------------H---HHHHHHH-
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHH-hhCCEEEEeeeccCC-C---cCCC-----------------H---HHHHHHH-
Confidence 589999998432211 23344443 468999999999842 1 1221 1 1122222
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhc--ccCCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCCChHHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS--RFAFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDKSGHQYKW 171 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~--~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~~~~Q~~W 171 (373)
..++- ..+.|||=+.. .+.+ .|.+ +.-.|.+-+ +..+..|+.++.++.++.++|-. ........-++-
T Consensus 55 --~~GVD-vIT~GNH~wdk---kei~-~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~ 127 (252)
T d2z06a1 55 --EAGVD-LVSLGNHAWDH---KEVY-ALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp --HHTCC-EEECCTTTTSC---TTHH-HHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred --HhCCC-EEEcCcccccc---hhhh-hhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHH
Confidence 22566 47899998753 2222 2222 222344322 34566788899888777777642 222222222333
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEE
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 251 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~y 251 (373)
+++.|.+ .+.+.+||=+|.=.. .+. .+| ...-+.+|.+|+-=|+|.- .....+-|+|+-|
T Consensus 128 ~d~~~~~---~~~~~i~VDfHaEaT---------SEK--~A~-g~~ldGrvsavvGTHTHV~-----TaD~rILp~GTay 187 (252)
T d2z06a1 128 LDRLLEE---EKADYVLVEVHAEAT---------SEK--MAL-AHYLDGRASAVLGTHTHVP-----TLDATRLPKGTLY 187 (252)
T ss_dssp HHHHHHH---CCCSEEEEEEECSCH---------HHH--HHH-HHHHBTTBSEEEEESSCSC-----BSCCEECTTSCEE
T ss_pred HHHHHhh---cCccEEEEEcccchh---------hhh--eee-eEecCCCEEEEEecCcccc-----ccccEEecCCeEE
Confidence 4444444 245668888884221 111 222 3344558999999999962 2222335789999
Q ss_pred EE-eCCCCC
Q 017367 252 IT-IGDGGN 259 (373)
Q Consensus 252 i~-~G~gG~ 259 (373)
++ .|..|.
T Consensus 188 iTDvGM~G~ 196 (252)
T d2z06a1 188 QTDVGMTGT 196 (252)
T ss_dssp ESCCCCBEE
T ss_pred EccCccccc
Confidence 86 444444
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.17 E-value=0.062 Score=45.81 Aligned_cols=183 Identities=16% Similarity=0.161 Sum_probs=98.3
Q ss_pred CeEEEEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.+||+++||+=..... .+.|..|.+ .++||||..|-.+.. + .|.. + +.+.++
T Consensus 4 ~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~-G---~Git-----------------~---k~~~eL 59 (281)
T d1t71a_ 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH-G---KGLS-----------------L---KHYEFL 59 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT-T---SSCC-----------------H---HHHHHH
T ss_pred cceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCC-C---cCCC-----------------H---HHHHHH
Confidence 5899999997432211 223444443 489999999999842 1 1221 1 112222
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhh---cccCCCCCC----C-CCCCcceEEEEeCCEEEEEEcccc--cCC-
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYS---SRFAFPSEE----S-GSLSSFYYSFNAGGIHFIMLGAYI--SYD- 163 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~---~~~~~p~~~----~-~~~~~~~ys~~~g~~~fi~ldt~~--~~~- 163 (373)
+ ..++- ..+.|||=+.. +....|. .+.-.|.+- + +..+..|..++..+-++.+++-.- ...
T Consensus 60 ~---~~GvD-vIT~GNH~wd~----kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~ 131 (281)
T d1t71a_ 60 K---EAGVN-YITMGNHTWFQ----KLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLP 131 (281)
T ss_dssp H---HHTCC-EEECCTTTTCC----GGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCS
T ss_pred H---HhCCc-EEEcCchhhhc----hhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeecccccccc
Confidence 2 22566 47899997642 2222222 122223331 1 234667888888876776666431 111
Q ss_pred -CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccC
Q 017367 164 -KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 242 (373)
Q Consensus 164 -~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~ 242 (373)
.......-+++.+.. ...+.+||=+|.=.. .+. .+| -..-+.+|.+|+-=|+|. |....
T Consensus 132 ~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEAT---------SEK--~A~-g~~lDGrvsaVvGTHTHV-----~TaD~ 191 (281)
T d1t71a_ 132 FKTTNPFKVLKELILK---RDCDLHIVDFHAETT---------SEK--NAF-CMAFDGYVTTIFGTHTHV-----PSADL 191 (281)
T ss_dssp SCBCCHHHHHHHHHTT---CCCSEEEEEEECSCH---------HHH--HHH-HHHHTTTSSEEEEESSSS-----CCTTC
T ss_pred ccccHHHHHHHHhhcc---cCCCeEEEEeccchh---------hhh--hhh-eeeeCCcEEEEEecCccc-----ccCcc
Confidence 111223333444433 355678888884221 111 222 234456899999999996 22223
Q ss_pred ccCCCCCEEEE
Q 017367 243 TLDPCGPVHIT 253 (373)
Q Consensus 243 ~~~~~g~~yi~ 253 (373)
.+-++|+-|++
T Consensus 192 rILp~GTAyiT 202 (281)
T d1t71a_ 192 RITPKGSAYIT 202 (281)
T ss_dssp EECTTSCEEES
T ss_pred ccccCCeEEEe
Confidence 33578999975
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.02 E-value=0.022 Score=50.19 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~ 230 (373)
.+.+.+.+++.++++++-||.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 367889999999999999996
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.24 E-value=0.034 Score=48.22 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCccEEEecccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVH 231 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H 231 (373)
.+.+.+.+++++.++++-||.=
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He~ 238 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQL 238 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCcEEEcCCCc
Confidence 3567888999999999999873
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=94.16 E-value=0.036 Score=48.09 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+++.+.+++++.++++-||.=.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCCEEEEcCccc
Confidence 36788999999999999999743
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.19 E-value=0.06 Score=49.55 Aligned_cols=24 Identities=8% Similarity=0.007 Sum_probs=20.3
Q ss_pred HHHHHHHHHHcCccEEEeccccce
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
.+++.+.+++++..+++-||.=..
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~ 272 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQD 272 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCT
T ss_pred hHHHHHHHHHcCCcEEEEcCcchh
Confidence 367889999999999999998643
|