Citrus Sinensis ID: 017373

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
MMLVKKDKNGCRREMRQLGVIRTKNNNARRNKRLQIWRLSAKNKETVMSLSLSLTSSSSSSSSSENYDVLEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKFNS
ccEEcccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccEEEEEccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEccccccccEEHHHHHcccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccc
cccccHccccEEEEEccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccEEEEEccccccHHHHHHHHccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEccccEEEcccccccccHHHHHHHHHcccEEEEEcccEEcEEEEEEHHcccHcccccEcccccEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEccccccccc
mmlvkkdkngcRREMRQLGvirtknnnarRNKRLQIWRLSAKNKETVMSLSLSLtsssssssssenydVLEKKArtntvtclshgtmsvigrrKEMEDAVRVELgcmggggggdgdgdddddqkkydffgvydghggaRVAEACKERMHEVLVEVIAgeeygeknIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVAncgdsravlsrggvvvplsvdhkpdrhdELIRVEAAggrvinwngprILGVLAtsrsigdqylkpfviskpdvmvtersdRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASsvnagnqnpAARAAAVLVELAISRGSSDNISVIVVELnkptkfns
mmlvkkdkngcrremrqlgvirtknnnarrnkrlQIWRLSAKNKETVMSLSLsltsssssssssenYDVLekkartntvtclshgtmsvigrrkeMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEViageeygeknieWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVancgdsravlsrggvvvplsvdhkpdrhDELIRVeaaggrvinwngPRILGVLATsrsigdqylkpfviskpdvmVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASsvnagnqnpAARAAAVLVELAIsrgssdnisvivvelnkptkfns
MMLVKKDKNGCRREMRQLGVIrtknnnarrnkrLQIWRLSAKNKETVMslslsltsssssssssENYDVLEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMggggggdgdgdddddQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTavvavvgkeelvvaNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPaaraaavlvelaISRGSSDNISVIVVELNKPTKFNS
*********************************LQIWR***************************************TVTCLSHGTMSVI***********************************YDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVEL********
********************************************************************************CLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE***EKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRI**********QNPAARAAAVLVELAISRGSSDNISVIVVE**KP*****
MMLVKKDKNGCRREMRQLGVIRTKNNNARRNKRLQIWRLSAKNKET************************EKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKFNS
********NGCRREMRQLGV**********************************************************VTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIK*********QNPAARAAAVLVELAISRGSSDNISVIVVELNK******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMLVKKDKNGCRREMRQLGVIRTKNNNARRNKRLQIWRLSAKNKETVMSLSLSLTSSSSSSSSSENYDVLEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKFNS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query372 2.2.26 [Sep-21-2011]
Q5SN75403 Probable protein phosphat yes no 0.763 0.704 0.583 1e-89
Q65XK7381 Probable protein phosphat no no 0.741 0.724 0.578 3e-81
Q0J2L7358 Probable protein phosphat no no 0.712 0.740 0.530 5e-73
Q5N9N2414 Probable protein phosphat no no 0.698 0.628 0.464 2e-69
Q9LNW3442 Protein phosphatase 2C 3 yes no 0.725 0.610 0.445 2e-69
Q0JLP9467 Probable protein phosphat no no 0.852 0.678 0.463 5e-69
Q9ZW21362 Probable protein phosphat no no 0.860 0.883 0.418 7e-69
P49597434 Protein phosphatase 2C 56 no no 0.768 0.658 0.491 4e-68
Q65XG6416 Probable protein phosphat no no 0.607 0.543 0.533 1e-66
P49598399 Protein phosphatase 2C 37 no no 0.701 0.654 0.456 2e-65
>sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1 Back     alignment and function desciption
 Score =  330 bits (846), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 179/307 (58%), Positives = 214/307 (69%), Gaps = 23/307 (7%)

Query: 80  TCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGG----GDGDGDDDDDQKKYDFFGVYDGH 135
            C+SHG +SVIGRR+EMEDA+ V    +         G G  +++  ++   FF VYDGH
Sbjct: 87  ACVSHGAVSVIGRRREMEDAIFVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYDGH 146

Query: 136 GGARVAEACKERMHEVLVEVI-----------AGEEYGEKNIEWERVMEGCFGKMDEEV- 183
           GG+RVAEAC+ERMH VL E +             +   E    W+  M  CF ++D EV 
Sbjct: 147 GGSRVAEACRERMHVVLAEEVRVRRLLQGGGGGADVEDEDRARWKEAMAACFTRVDGEVG 206

Query: 184 --NRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELI 241
                   E+ VGSTAVVAVVG   +VVANCGDSRAVLSRGGV VPLS DHKPDR DE+ 
Sbjct: 207 GAEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEME 266

Query: 242 RVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDG 301
           RVEAAGGRVINWNG RILGVLATSRSIGD YLKP+VI++P+V V +R+D+DEFLILASDG
Sbjct: 267 RVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDG 326

Query: 302 LWDVVSNEAACQVVRRCFSGRI--KWASSVNAGNQNPAARAAAVLVELAISRGSSDNISV 359
           LWDVVSN+ AC++ R C SGR   K+  SV+      AA AAA+LVELAISRGS DNISV
Sbjct: 327 LWDVVSNDVACKIARNCLSGRAASKYPESVSGST---AADAAALLVELAISRGSKDNISV 383

Query: 360 IVVELNK 366
           +VVEL +
Sbjct: 384 VVVELRR 390

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q65XK7|P2C51_ORYSJ Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1 Back     alignment and function description
>sp|Q0J2L7|P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2 Back     alignment and function description
>sp|Q5N9N2|P2C09_ORYSJ Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZW21|P2C24_ARATH Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1 Back     alignment and function description
>sp|P49597|P2C56_ARATH Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2 Back     alignment and function description
>sp|Q65XG6|P2C49_ORYSJ Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1 Back     alignment and function description
>sp|P49598|P2C37_ARATH Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query372
255545018352 protein phosphatase 2c, putative [Ricinu 0.897 0.948 0.590 1e-101
224120666271 predicted protein [Populus trichocarpa] 0.720 0.988 0.677 1e-88
115438949403 Os01g0656200 [Oryza sativa Japonica Grou 0.763 0.704 0.583 8e-88
449465200346 PREDICTED: probable protein phosphatase 0.790 0.849 0.580 1e-87
357135769392 PREDICTED: probable protein phosphatase 0.736 0.698 0.6 2e-87
326533450398 predicted protein [Hordeum vulgare subsp 0.763 0.713 0.580 3e-87
449516069346 PREDICTED: probable protein phosphatase 0.790 0.849 0.577 7e-87
225426354393 PREDICTED: probable protein phosphatase 0.741 0.702 0.552 2e-84
224132930242 predicted protein [Populus trichocarpa] 0.637 0.979 0.620 4e-84
357128446 495 PREDICTED: probable protein phosphatase 0.766 0.575 0.562 9e-84
>gi|255545018|ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus communis] gi|223547478|gb|EEF48973.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/369 (59%), Positives = 258/369 (69%), Gaps = 35/369 (9%)

Query: 15  MRQLGVIRTKNNNARRNKRLQI-WRLSAKNKETVMSLSLSLTSSSSSSSSSENYDVL--- 70
           M QL VI+T N+  RR K  ++ +   AK    V     +   S+  S S +N  VL   
Sbjct: 1   MNQLTVIKTINSRRRRLKIRRLKYTCQAKKDAVVQEAKTTSDCSAEISLSCKNEVVLSGY 60

Query: 71  ----------EKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDD 120
                     E++        +S+G++SVIGRR+EMEDAV+VELG    GG         
Sbjct: 61  KRDELLERNDEEEGDLQRFAGMSYGSISVIGRRREMEDAVKVELGFTEKGG--------- 111

Query: 121 DDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIA----GEEYGEKNIEWERVMEGCF 176
              + YDFFGVYDGHGGARVAEACKER+H VL EVI     G+ +  + IEWE+VME CF
Sbjct: 112 ---ESYDFFGVYDGHGGARVAEACKERLHRVLEEVIVEEEDGKSHKGRTIEWEKVMEECF 168

Query: 177 GKMDEEVNRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDR 236
            +MDEEV + R    MVGSTAVVAVVG++ELVVANCGDSRAVL RGGV VPLSVDHKPDR
Sbjct: 169 KRMDEEVEKDR----MVGSTAVVAVVGRDELVVANCGDSRAVLCRGGVAVPLSVDHKPDR 224

Query: 237 HDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLI 296
            DEL RVEAAGGR+INWNG R+LGVLATSRSIGDQYLKPFVISKP+V V +R+++DEFLI
Sbjct: 225 PDELERVEAAGGRIINWNGHRVLGVLATSRSIGDQYLKPFVISKPEVTVNKRTEKDEFLI 284

Query: 297 LASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDN 356
           LASDGLWDV+SNE ACQV RRC  GR++  S     ++  AA AAA+LVELAI+ GS DN
Sbjct: 285 LASDGLWDVISNEVACQVGRRCLMGRMRRKSQ-EVSSEGRAAEAAAILVELAIAGGSKDN 343

Query: 357 ISVIVVELN 365
           ISVIVVEL 
Sbjct: 344 ISVIVVELK 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120666|ref|XP_002318387.1| predicted protein [Populus trichocarpa] gi|222859060|gb|EEE96607.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115438949|ref|NP_001043754.1| Os01g0656200 [Oryza sativa Japonica Group] gi|75286811|sp|Q5SN75.1|P2C08_ORYSJ RecName: Full=Probable protein phosphatase 2C 8; Short=OsPP2C08 gi|55773943|dbj|BAD72331.1| protein phosphatase 2C-like [Oryza sativa Japonica Group] gi|113533285|dbj|BAF05668.1| Os01g0656200 [Oryza sativa Japonica Group] gi|215686965|dbj|BAG90835.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|449465200|ref|XP_004150316.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357135769|ref|XP_003569481.1| PREDICTED: probable protein phosphatase 2C 8-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|326533450|dbj|BAK05256.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|449516069|ref|XP_004165070.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225426354|ref|XP_002266149.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera] gi|297742328|emb|CBI34477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224132930|ref|XP_002321444.1| predicted protein [Populus trichocarpa] gi|222868440|gb|EEF05571.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357128446|ref|XP_003565884.1| PREDICTED: probable protein phosphatase 2C 8-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query372
TAIR|locus:2080787399 PP2CA "protein phosphatase 2CA 0.467 0.436 0.551 4.8e-60
TAIR|locus:2025087442 HAI2 "highly ABA-induced PP2C 0.610 0.513 0.492 6.9e-59
TAIR|locus:2168449413 HAI1 "highly ABA-induced PP2C 0.607 0.547 0.498 1.4e-58
TAIR|locus:2005488434 ABI1 "ABA INSENSITIVE 1" [Arab 0.768 0.658 0.426 1.6e-54
TAIR|locus:2043142362 HAI3 "highly ABA-induced PP2C 0.725 0.745 0.436 4.3e-54
TAIR|locus:2164610423 ABI2 "AT5G57050" [Arabidopsis 0.776 0.683 0.410 1.7e-52
TAIR|locus:2007943511 HAB2 "homology to ABI2" [Arabi 0.620 0.452 0.420 1.2e-42
TAIR|locus:2030230511 HAB1 "AT1G72770" [Arabidopsis 0.594 0.432 0.417 4.6e-41
TAIR|locus:2165371416 AHG1 "ABA-hypersensitive germi 0.599 0.536 0.404 2.4e-37
TAIR|locus:2008545445 AT1G67820 [Arabidopsis thalian 0.513 0.429 0.42 2.2e-36
TAIR|locus:2080787 PP2CA "protein phosphatase 2CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 475 (172.3 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
 Identities = 97/176 (55%), Positives = 114/176 (64%)

Query:   191 EMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRV 250
             + VGST              NCGDSRAVL R GV +PLSVDHKPDR DELIR++ AGGRV
Sbjct:   218 DAVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRV 277

Query:   251 INWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEA 310
             I W+G R+LGVLA SR+IGD YLKP+VI  P+V VT+R+D DE LILASDGLWDVV NE 
Sbjct:   278 IYWDGARVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNET 337

Query:   311 ACQVVRRCFSGRIKWASSVNAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNK 366
             AC V R C  G    A   +    N             ++R SSDN+SV+VV+L K
Sbjct:   338 ACGVARMCLRGA--GAGDDSDAAHNACSDAALLLTKLALARQSSDNVSVVVVDLRK 391
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS;IMP;TAS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP;TAS
GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0009414 "response to water deprivation" evidence=IEP;RCA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP
GO:0010119 "regulation of stomatal movement" evidence=IMP
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2025087 HAI2 "highly ABA-induced PP2C gene 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168449 HAI1 "highly ABA-induced PP2C gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005488 ABI1 "ABA INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043142 HAI3 "highly ABA-induced PP2C gene 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164610 ABI2 "AT5G57050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007943 HAB2 "homology to ABI2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030230 HAB1 "AT1G72770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165371 AHG1 "ABA-hypersensitive germination 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008545 AT1G67820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5SN75P2C08_ORYSJ3, ., 1, ., 3, ., 1, 60.58300.76340.7047yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-83
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-80
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 8e-61
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 4e-44
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-34
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-29
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 2e-05
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  254 bits (651), Expect = 1e-83
 Identities = 113/285 (39%), Positives = 150/285 (52%), Gaps = 35/285 (12%)

Query: 83  SHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAE 142
           S G     G RK  EDAV ++       GG                FGV+DGHGG    E
Sbjct: 2   SAGVSDKGGDRKTNEDAVVIKPNLNNEDGG---------------LFGVFDGHGGHAAGE 46

Query: 143 ACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEV---NRGRLREEMVGSTAVV 199
              + + E L+E    E       + E  +   F + DEE+    +    +   G+TAVV
Sbjct: 47  FASKLLVEELLE-ELEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVV 105

Query: 200 AVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRIL 259
           A++   +L VAN GDSRAVL R G  V L+ DHKP   +E  R+E AGGRV N    R+ 
Sbjct: 106 ALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSNG---RVP 162

Query: 260 GVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCF 319
           GVLA +R++GD  LKP V ++PDV V + ++ D+FLILASDGLWDV+SN+ A  +VR   
Sbjct: 163 GVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSEL 222

Query: 320 SGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVEL 364
                         +     AA  LV+LA+ RGS DNI+V+VV L
Sbjct: 223 -------------AKEDLQEAAQELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 372
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.93
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.9
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.87
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.78
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.7
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.54
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.49
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-51  Score=396.32  Aligned_cols=263  Identities=33%  Similarity=0.494  Sum_probs=221.4

Q ss_pred             cceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 017373           80 TCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE  159 (372)
Q Consensus        80 ~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~  159 (372)
                      ..+.++..|++|.|+.|||++++..++....      +....+.....||||||||||+.+|++|++.+++.|.+...  
T Consensus        63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~------~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~--  134 (365)
T PLN03145         63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDF------GLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED--  134 (365)
T ss_pred             CceEEEEEccccCCCCCCCceEecccccccc------cccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc--
Confidence            3478899999999999999998765432110      01111123568999999999999999999999998876432  


Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhcc--cCCcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCCh
Q 017373          160 EYGEKNIEWERVMEGCFGKMDEEVNRG--RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRH  237 (372)
Q Consensus       160 ~~~~~~~~~~~~l~~a~~~~~~~i~~~--~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~  237 (372)
                          ....+.++|.++|..++..+...  ......+|||++++++.++.+|++||||||+|++++|++++||+||++.++
T Consensus       135 ----~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~  210 (365)
T PLN03145        135 ----FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCS  210 (365)
T ss_pred             ----cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCH
Confidence                13466788999999999998654  123445999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeeeecCCCccccccccccccccccCCC-------ceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHH
Q 017373          238 DELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKP-------FVISKPDVMVTERSDRDEFLILASDGLWDVVSNEA  310 (372)
Q Consensus       238 ~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~-------~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~e  310 (372)
                      .|..||.+.||.+..   .++.|.+++||+|||..+|.       .++++|++..+++.++|+|||||||||||+|++++
T Consensus       211 ~E~~RI~~~Gg~v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee  287 (365)
T PLN03145        211 KERKRIEASGGYVYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQN  287 (365)
T ss_pred             HHHHHHHHcCCceec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHH
Confidence            999999999998863   57889999999999987753       36789999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCC
Q 017373          311 ACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTK  369 (372)
Q Consensus       311 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~  369 (372)
                      +.+++...+..            ..+++++|+.|++.|+.+|+.||||||||+|+..++
T Consensus       288 ~v~~i~~~l~~------------~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~  334 (365)
T PLN03145        288 AVDFARRRLQE------------HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPP  334 (365)
T ss_pred             HHHHHHHHHhc------------CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCC
Confidence            99888765432            256889999999999999999999999999987544

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-58
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-58
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-57
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-55
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-55
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-55
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-55
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 7e-55
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 7e-55
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 8e-54
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-25
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-21
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-21
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-21
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-20
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-20
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 4e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-05
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-05
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 7e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  222 bits (566), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/309 (42%), Positives = 166/309 (53%), Gaps = 27/309 (8%)
Query: 84  HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
           +G  S+ GRR EMEDAV   +                  Q    FFGVYDGHGG++VA  
Sbjct: 11  YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 69
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
           C+ERMH  L E IA E+     G+  +E W++ +   F ++D E+    +  E VGST  
Sbjct: 70  CRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 127
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
                       NCGDSRAVL RG   +PLSVDHKPDR DE  R+EAAGG+VI WNG R+
Sbjct: 128 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 187
Query: 259 LGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRC 318
            GVLA SRSIGD+YLKP +I  P+V   +R   D+ LILASDG+WDV+++E AC++ R+ 
Sbjct: 188 FGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK- 246
Query: 319 FSGRIKWASSVNA---------------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVE 363
              RI      NA               G                I RGS DNISV+VV+
Sbjct: 247 ---RILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVD 303
Query: 364 LNKPTKFNS 372
           L    K  S
Sbjct: 304 LKPRRKLKS 312
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-117
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-111
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-101
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-101
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-98
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-98
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-97
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-96
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 8e-81
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-73
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 4e-69
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-68
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 5e-43
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-20
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-18
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 7e-17
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-16
3rnr_A211 Stage II sporulation E family protein; structural 6e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  342 bits (878), Expect = e-117
 Identities = 142/308 (46%), Positives = 180/308 (58%), Gaps = 19/308 (6%)

Query: 81  CLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARV 140
              +G  S+ GRR EMEDAV      +    G   DG  D       FFGVYDGHGG++V
Sbjct: 8   VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSA-AHFFGVYDGHGGSQV 66

Query: 141 AEACKERMHEVLVEVIAGEEYGEKNIE-----WERVMEGCFGKMDEEVNRGRLREEMVGS 195
           A  C+ERMH  L E IA E+    + +     W++ +   F ++D E+    +  E VGS
Sbjct: 67  ANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGS 124

Query: 196 TAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG 255
           T+VVAVV    + VANCGDSRAVL RG   +PLSVDHKPDR DE  R+EAAGG+VI WNG
Sbjct: 125 TSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNG 184

Query: 256 PRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
            R+ GVLA SRSIGD+YLKP +I  P+V   +R   D+ LILASDG+WDV+++E AC++ 
Sbjct: 185 ARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMA 244

Query: 316 RRC-----------FSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVEL 364
           R+                +        G    A  AA  L +LAI RGS DNISV+VV+L
Sbjct: 245 RKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDL 304

Query: 365 NKPTKFNS 372
               K  S
Sbjct: 305 KPRRKLKS 312
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query372
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.9
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.88
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.79
3f79_A255 Probable two-component response regulator; adaptor 99.79
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.37
3eq2_A394 Probable two-component response regulator; adaptor 98.65
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=3.9e-52  Score=400.06  Aligned_cols=289  Identities=48%  Similarity=0.775  Sum_probs=232.0

Q ss_pred             eeeeeecccCCCCCCceEEEecCCCCCCC---CCCCCCC-CCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhc
Q 017373           83 SHGTMSVIGRRKEMEDAVRVELGCMGGGG---GGDGDGD-DDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAG  158 (372)
Q Consensus        83 ~~~~~s~~G~R~~nEDa~~v~~~~~~~~~---~~~~~~~-~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~  158 (372)
                      .||..|++|+|..|||++++...+.....   ..+..+. .........||+|||||||+.+|++|++.++..|.+.+..
T Consensus        15 ~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~   94 (337)
T 3qn1_B           15 LWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIER   94 (337)
T ss_dssp             CEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHh
Confidence            57999999999999999998765321000   0000000 0001126789999999999999999999999999988764


Q ss_pred             ccc--------CCchHHHHHHHHHHHHHHHHHHhccc--------------CCcccccceEEEEEEecCeEEEeeeccce
Q 017373          159 EEY--------GEKNIEWERVMEGCFGKMDEEVNRGR--------------LREEMVGSTAVVAVVGKEELVVANCGDSR  216 (372)
Q Consensus       159 ~~~--------~~~~~~~~~~l~~a~~~~~~~i~~~~--------------~~~~~~GtT~~v~~i~~~~l~~anvGDSR  216 (372)
                      ...        ......+..+|.++|..+|+.+....              .....+|||++++++.++++|++||||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR  174 (337)
T 3qn1_B           95 IKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR  174 (337)
T ss_dssp             TC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCE
T ss_pred             hhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcE
Confidence            221        11246788999999999999998642              23457899999999999999999999999


Q ss_pred             EEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEE
Q 017373          217 AVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLI  296 (372)
Q Consensus       217 ~~l~r~g~~~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LI  296 (372)
                      +|++|+|++++||.||++.++.|..||...||.+..+...+++|.+++||+||+..++++++++|++..+.+.+.++|||
T Consensus       175 ~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d~ll  254 (337)
T 3qn1_B          175 AVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLI  254 (337)
T ss_dssp             EEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEE
T ss_pred             EEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCCCEEE
Confidence            99999999999999999999999999999999999998899999999999999999999999999999999978778999


Q ss_pred             EEcCCCCCCCCHHHHHHHHHhhhccccccc--ccC---CCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCC
Q 017373          297 LASDGLWDVVSNEAACQVVRRCFSGRIKWA--SSV---NAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKFN  371 (372)
Q Consensus       297 L~SDGv~d~ls~~ei~~i~~~~~~~~~~~~--~~~---~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~  371 (372)
                      ||||||||+|+++||.+++...+..+....  .+.   ......+++++|+.|++.|+.+|+.||||||||+|...++++
T Consensus       255 L~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~  334 (337)
T 3qn1_B          255 LASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFK  334 (337)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSCC---
T ss_pred             EEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCCcccc
Confidence            999999999999999999986432110000  000   000135788999999999999999999999999999887765
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 372
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-50
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-30
d1pg4a_ 643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 2e-04
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 1e-50
 Identities = 91/315 (28%), Positives = 136/315 (43%), Gaps = 44/315 (13%)

Query: 69  VLEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDF 128
            +EK         L +G  S+ G R EMEDA    +                   + + F
Sbjct: 8   KMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVI-------------GLPSGLESWSF 54

Query: 129 FGVYDGHGGARVAEACKERMHEVLVE--VIAGEEYGEKNIEWERVMEGCFGKMDEEVNR- 185
           F VYDGH G++VA+ C E + + +       G          +  +   F ++DE +   
Sbjct: 55  FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 114

Query: 186 --GRLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRV 243
              +   +  GSTAV  ++  +     NCGDSR +L R   V   + DHKP    E  R+
Sbjct: 115 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 174

Query: 244 EAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERS-DRDE 293
           + AGG        R+ G LA SR++GD   K           V  +P+V   ERS + D+
Sbjct: 175 QNAGGS---VMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQ 231

Query: 294 FLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGS 353
           F+ILA DG+WDV+ NE  C  VR                  +   +    +V+  + +GS
Sbjct: 232 FIILACDGIWDVMGNEELCDFVRSRLE------------VTDDLEKVCNEVVDTCLYKGS 279

Query: 354 SDNISVIVVEL-NKP 367
            DN+SVI++   N P
Sbjct: 280 RDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query372
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-54  Score=406.23  Aligned_cols=272  Identities=34%  Similarity=0.517  Sum_probs=234.8

Q ss_pred             hhhhcccCCccceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHH
Q 017373           70 LEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMH  149 (372)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~  149 (372)
                      +++....+...++.||+++++|+|++|||++.+...+...             ..+..||||||||||+.++++|++.++
T Consensus         9 ~~k~~~~~~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~-------------~~~~~lf~V~DGhGG~~~s~~~~~~l~   75 (295)
T d1a6qa2           9 MEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSG-------------LESWSFFAVYDGHAGSQVAKYCCEHLL   75 (295)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTT-------------EEEEEEEEEEEEESCSHHHHHHHHHHH
T ss_pred             cccCcccccCCceEEEEEeCccCCCcccCeeEEEcccCCC-------------CCceEEEEEEeCCCChHHHHHHHHHHH
Confidence            3455555677789999999999999999999887665321             146789999999999999999999999


Q ss_pred             HHHHHHHhccc--cCCchHHHHHHHHHHHHHHHHHHhcc---cCCcccccceEEEEEEecCeEEEeeeccceEEEEeCCe
Q 017373          150 EVLVEVIAGEE--YGEKNIEWERVMEGCFGKMDEEVNRG---RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGV  224 (372)
Q Consensus       150 ~~l~~~~~~~~--~~~~~~~~~~~l~~a~~~~~~~i~~~---~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~  224 (372)
                      +.|.+......  .......+.++|.++|.++++.+...   ......+|||++++++.++++|++|+||||+|+++++.
T Consensus        76 ~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~  155 (295)
T d1a6qa2          76 DHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK  155 (295)
T ss_dssp             HHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTE
T ss_pred             HHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeeccc
Confidence            99876543221  22345678899999999999887543   45567789999999999999999999999999999999


Q ss_pred             eeecCCCCCCCChHHHHHHHHcCCeeeecCCCccccccccccccccccCC---------CceeecCeEEEEEec-CCCeE
Q 017373          225 VVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERS-DRDEF  294 (372)
Q Consensus       225 ~~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k---------~~v~~~P~i~~~~l~-~~D~~  294 (372)
                      +++||.||++.++.|..|+...||.+..   .+++|.+++||+|||..+|         +++++.|++..+++. ++|+|
T Consensus       156 ~~~lT~dH~~~~~~E~~Ri~~~gg~v~~---~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~f  232 (295)
T d1a6qa2         156 VHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF  232 (295)
T ss_dssp             EEEECCCCCTTSHHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEE
T ss_pred             ceeeccccCcccHHHHhhHhhcCCcccc---cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeeccccee
Confidence            9999999999999999999999999863   6889999999999999887         458999999999985 56779


Q ss_pred             EEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCC
Q 017373          295 LILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTK  369 (372)
Q Consensus       295 LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~  369 (372)
                      ||||||||||+|+++|++++++..+.            ...+++.+|+.|++.|+.+|+.||||||||+|+..++
T Consensus       233 lvL~SDGl~d~l~~~ei~~~v~~~~~------------~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~k  295 (295)
T d1a6qa2         233 IILACDGIWDVMGNEELCDFVRSRLE------------VTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPK  295 (295)
T ss_dssp             EEEECHHHHTTSCHHHHHHHHHHHHT------------TCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCC
T ss_pred             EeeecCcccccCCHHHHHHHHHHHhh------------cCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCCc
Confidence            99999999999999999999987654            2467899999999999999999999999999988764
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure