Citrus Sinensis ID: 017407

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
Protein Sequence
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNLKLPFSTFFIRT
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHHccEEEEEEcccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHccccccEEEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHcccHHHHHHccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEEccccHHHHHHHHHHcccccccccHHHHHHHHcccccccccEEEEEEEEEEEccccccccccccccccccccccHHHHHcccEEEEEEEEcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEccccccEcccccccccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcHEEEEcccccccccccccccccccccccHHHccccEEEEEEEEccccccEEEEEc
Coil and Loop (DISEMBL)
mmkttnsisvlsdppsrscLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSmysakpetcknqqcrlpgtealpegivsktsnlemrplwsspsklnnqrppmNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFakrflhpdivAEYNYIFlwdedigvenfnprrylsivkdegleisqpaldpvksevhhpitarrrnsKAHRRMYkykgsgrcddystappcigwvemMAPVFSRAAWRCAWYMIQNDLIHAWGLdiqlgycaqgdrtknvgvvdseyivhlglptlgvttepelntvgqasddleqIANPVALVCILnlklpfstffirt
Flexible Loop (DISEMBL)
mmkttnsisvlsdppsRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSspsklnnqrPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEIsqpaldpvksevhhpitarrrnskahrrmykykgsgrcddysTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNlklpfstffirt
Low Complexity Region (SEG)
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNLKLPFSTFFIRT
Disordered region (IsUnstruct)
*****************SCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAK***********************************************NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLE******************************YKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNLKLPFSTFFI**
Disordered Region (DISOPRED)
***********************FIAAALICSVYFIGSSFVAKENKERLMRWGL****************************IVSKTSNLEM****************MNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHR*MYKYK*SGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGL***************************VALVCILNLKLPFSTFFIRT
Disordered Region (DISEMBL)
*************PPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS*****************RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNLKLPFSTFFIRT
Disordered Region (DISPRO)
**************PSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMY*********QQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL****************DLEQIANPVALVCILNLKLPFSTFFIRT
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALVCILNLKLPFSTFFIRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
255575938	370	conserved hypothetical protein [Ricinus	0.897	0.902	0.710	1e-142
359486223	413	PREDICTED: uncharacterized protein LOC10	0.948	0.854	0.674	1e-141
356560121	385	PREDICTED: uncharacterized protein LOC10	0.930	0.898	0.66	1e-135
356541848	387	PREDICTED: uncharacterized protein LOC10	0.922	0.886	0.667	1e-134
92893672	355	Protein of unknown function DUF707 [Medi	0.892	0.935	0.683	1e-133
240255999	389	uncharacterized protein [Arabidopsis tha	0.844	0.807	0.688	1e-132
357445211	406	hypothetical protein MTR_2g005330 [Medic	0.916	0.839	0.644	1e-131
357445209	368	hypothetical protein MTR_2g005330 [Medic	0.892	0.902	0.658	1e-130
449515369	402	PREDICTED: uncharacterized LOC101205845,	0.865	0.800	0.658	1e-128
297735287	413	unnamed protein product [Vitis vinifera]	0.919	0.828	0.635	1e-128

>gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/335 (71%), Positives = 277/335 (82%), Gaps = 1/335 (0%)

Query: 2   MKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSA 61
           MK+    S   DP SRS LC+LF+ A+LICS YFIG SF+ KE KERL RW ++ ++ S 
Sbjct: 1   MKSLYCASASPDPKSRSYLCTLFVVASLICSAYFIGGSFIGKEYKERLARWQVIETVQST 60

Query: 62  KPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQK 121
           K   C++Q C+  GT+ALP+GIV KTS+ EMRPLW+S  + N Q+   +LLA+A GI QK
Sbjct: 61  KSTNCEDQ-CKPTGTKALPQGIVRKTSDFEMRPLWNSSLEDNKQKLSKSLLALAVGINQK 119

Query: 122 KIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDI 181
            +VDQIV+KFP  DFVVMLFHYDGVVD+W+DL W+D AIHVSA NQTKWWFAKRFLHPDI
Sbjct: 120 VVVDQIVKKFPLSDFVVMLFHYDGVVDKWRDLPWSDHAIHVSAVNQTKWWFAKRFLHPDI 179

Query: 182 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKA 241
           V+EY+Y+FLWDED+GVENFNP+RYLSI++DEGLEISQPALDP KS V+HPITAR+  S  
Sbjct: 180 VSEYDYLFLWDEDLGVENFNPKRYLSIIRDEGLEISQPALDPTKSAVYHPITARQPKSTV 239

Query: 242 HRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG 301
           HRR+YK+KGSGRC   ST+PPCIGWVEMMAPVFS AAWRCAW+MIQNDLIHAWGLD QLG
Sbjct: 240 HRRIYKFKGSGRCYGNSTSPPCIGWVEMMAPVFSTAAWRCAWHMIQNDLIHAWGLDFQLG 299

Query: 302 YCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPEL 336
           YCAQGDRTKNVGVVDSEYIVHLGL TLGV    E+
Sbjct: 300 YCAQGDRTKNVGVVDSEYIVHLGLLTLGVFNGTEV 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/362 (67%), Positives = 282/362 (77%), Gaps = 9/362 (2%)

Query: 2   MKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLV------ 55
           MKT + IS+ SDP SRS LCSLFI A L C VYFI S F  K+ K+R  RW +       
Sbjct: 1   MKTLSCISLPSDPKSRSYLCSLFIGACLFCGVYFIASEFTVKDYKDRSSRWQISVFQNAH 60

Query: 56  -HSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAI 114
            +S+ + +   CKNQ CR  G+EALPEGIV KTSNLE++PLW +        P  +LLA+
Sbjct: 61  SNSIQNTQSSKCKNQ-CRPSGSEALPEGIVVKTSNLEVQPLWGATLNGEKSSPSKSLLAM 119

Query: 115 AAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAK 174
           A GIKQK+IV+QIV KF   +FVVMLFHYDGVVDEW++  W+D AIHV+  NQTKWWFAK
Sbjct: 120 AVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWREFAWSDHAIHVTVVNQTKWWFAK 179

Query: 175 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITA 234
           RFLHPDIVAEYNYIFLWDED+GVENF+P RY+SIV+DEGLEISQPALDP KS VHH ITA
Sbjct: 180 RFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVEDEGLEISQPALDPKKSRVHHQITA 239

Query: 235 RRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW 294
           R RNS+ HRR YK++GSGRCDD STAPPC+GWVEMMAPVFS+AAWRC W+MIQN+LIHAW
Sbjct: 240 RVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMAPVFSKAAWRCVWHMIQNELIHAW 299

Query: 295 GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDL-EQIANPV 353
           G+D+QLGYCAQGDRTKNVGVVDSEY+VHL LPTLGV  E EL   G     L E++   V
Sbjct: 300 GVDMQLGYCAQGDRTKNVGVVDSEYVVHLALPTLGVLDENELRGEGHDHSSLREKLPKSV 359

Query: 354 AL 355
           AL
Sbjct: 360 AL 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max]

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/350 (66%), Positives = 281/350 (80%), Gaps = 4/350 (1%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMY 59
           MK+ +S++  +L DP +R  L S+F+  +LI   YF+G++F AKE K+RL RWGL+H+M 
Sbjct: 1   MKSFDSVTGFILPDPKNRLFLWSVFLVVSLISGAYFVGNAFFAKEYKQRLARWGLIHTMP 60

Query: 60  SAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIK 119
            +K  +CK +QC   G+EALPEGI+++TSNLEMRPLW S       + P+NLLA+A G++
Sbjct: 61  DSKFNSCK-RQCLPFGSEALPEGIIARTSNLEMRPLWDSGKDNGILKRPLNLLAMAVGLE 119

Query: 120 QKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHP 179
           QK+IV++IV KF S DFVVMLFHYDG VD WK L W+ RAIHVSA NQTKWWFAKRFLHP
Sbjct: 120 QKEIVNKIVEKFLSSDFVVMLFHYDGFVDGWKSLAWSSRAIHVSAINQTKWWFAKRFLHP 179

Query: 180 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNS 239
           DIV EYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSEVHHP+T  +  S
Sbjct: 180 DIVVEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSEVHHPLTVHKAGS 239

Query: 240 KAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
           K HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQNDLIHAWGLD Q
Sbjct: 240 KVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQNDLIHAWGLDRQ 299

Query: 300 LGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQI 349
           LGYCAQGDR +NVGVVDSEYIVHLGLPTLG +   E  + G + D+  ++
Sbjct: 300 LGYCAQGDRMQNVGVVDSEYIVHLGLPTLGGSNGNEAPS-GSSGDNRAKV 348

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/346 (66%), Positives = 273/346 (78%), Gaps = 3/346 (0%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMY 59
           MK+  S++  VL DP +R  L S+ I  +LI   YF+G++F AKE K+RL RWGL+H+M 
Sbjct: 1   MKSFGSVTGFVLPDPKNRLLLWSVLILVSLISGAYFVGNAFFAKEYKQRLARWGLIHTMP 60

Query: 60  SAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIK 119
            +K   CK +QC   G+EALPEGI+++TSNLEMRPLW S       + P+NLLA+A G+K
Sbjct: 61  HSKFNACK-RQCLPFGSEALPEGIIARTSNLEMRPLWDSGKDNRILKRPLNLLAMAVGLK 119

Query: 120 QKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHP 179
           QK+IV++IV KF S  FVVMLFHYDG VD WK L W+  AIHVSA NQTKWWFAKRFLHP
Sbjct: 120 QKEIVNKIVEKFLSSGFVVMLFHYDGFVDGWKSLAWSSCAIHVSAINQTKWWFAKRFLHP 179

Query: 180 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNS 239
           DIVAEYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSEVHHP+T  +  S
Sbjct: 180 DIVAEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSEVHHPLTVHKAVS 239

Query: 240 KAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
           K HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQNDLIHAWGLD Q
Sbjct: 240 KVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQNDLIHAWGLDRQ 299

Query: 300 LGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDD 345
           LGYCAQGDR +NVGVVDSEYIVHLGLPTLG +   E+     +  D
Sbjct: 300 LGYCAQGDRMRNVGVVDSEYIVHLGLPTLGGSNGNEVQAPSDSPGD 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|92893672|gb|ABE91850.1| Protein of unknown function DUF707 [Medicago truncatula] gi|92893916|gb|ABE91966.1| Protein of unknown function DUF707 [Medicago truncatula]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/341 (68%), Positives = 280/341 (82%), Gaps = 9/341 (2%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAK 174
           + G+KQK++VD+IV+KFPS DFVVMLFHYDG VD WK+L W++RAIHVSA NQTKWWFAK
Sbjct: 119 SVGVKQKEVVDKIVKKFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIHVSAINQTKWWFAK 178

Query: 175 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITA 234
           RFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSE+HHP+T 
Sbjct: 179 RFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPGKSEIHHPLTV 238

Query: 235 RRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW 294
            +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C W+MIQNDLIHAW
Sbjct: 239 HKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQCVWHMIQNDLIHAW 298

Query: 295 GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPE 335
           GLD QLGYCAQGDR KNVGVVDSEYIVHLGLPTLG +   E
Sbjct: 299 GLDRQLGYCAQGDRMKNVGVVDSEYIVHLGLPTLGGSNGNE 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/324 (68%), Positives = 265/324 (81%), Gaps = 10/324 (3%)

Query: 16  SRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPE--------TCK 67
           +RSCLCS+ I  ALIC  YFI ++++AK+ KE+L++W +   M+++  +        TCK
Sbjct: 7   NRSCLCSVLITTALICGAYFICNAYLAKDFKEKLLKWEITDKMHNSTDKMQNATTTSTCK 66

Query: 68  NQQCRLPGTEALPEGIVSKTSNLEMRPLWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQ 126
           N   +  GTEALP+GI+ KTSNLE + LW+   +K       M+LLA+A GIKQK++V++
Sbjct: 67  NFN-KPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNK 125

Query: 127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
           +++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQTKWWFAKRFLHPDIVAEY 
Sbjct: 126 VIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYE 185

Query: 187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
           YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEVHHPITARR+ SK HRRMY
Sbjct: 186 YIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMY 245

Query: 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQG 306
           KYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQG
Sbjct: 246 KYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQG 305

Query: 307 DRTKNVGVVDSEYIVHLGLPTLGV 330
           DR KNVGVVD+EYI+H GLPTLGV
Sbjct: 306 DRKKNVGVVDAEYIIHYGLPTLGV 329

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/363 (64%), Positives = 283/363 (77%), Gaps = 22/363 (6%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKF-------------PSKDFVVMLFHYDGVVDEWKDLVWADRAIH 161
           + G+KQK++VD+IV+KF             PS DFVVMLFHYDG VD WK+L W++RAIH
Sbjct: 119 SVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIH 178

Query: 162 VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 221
           VSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPAL
Sbjct: 179 VSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPAL 238

Query: 222 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 281
           DP KSE+HHP+T  +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C
Sbjct: 239 DPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQC 298

Query: 282 AWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQ 341
            W+MIQNDLIHAWGLD QLGYCAQGDR KNVGVVDSEYIVHLGLPTLG +   E ++   
Sbjct: 299 VWHMIQNDLIHAWGLDRQLGYCAQGDRMKNVGVVDSEYIVHLGLPTLGGSNGNEGSSNSH 358

Query: 342 ASD 344
             D
Sbjct: 359 RDD 361

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445209|ref|XP_003592882.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481930|gb|AES63133.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/354 (65%), Positives = 280/354 (79%), Gaps = 22/354 (6%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKF-------------PSKDFVVMLFHYDGVVDEWKDLVWADRAIH 161
           + G+KQK++VD+IV+KF             PS DFVVMLFHYDG VD WK+L W++RAIH
Sbjct: 119 SVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIH 178

Query: 162 VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 221
           VSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPAL
Sbjct: 179 VSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPAL 238

Query: 222 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 281
           DP KSE+HHP+T  +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C
Sbjct: 239 DPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQC 298

Query: 282 AWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPE 335
            W+MIQNDLIHAWGLD QLGYCAQGDR KNVGVVDSEYIVHLGLPTLG +   E
Sbjct: 299 VWHMIQNDLIHAWGLDRQLGYCAQGDRMKNVGVVDSEYIVHLGLPTLGGSNGNE 352

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515369|ref|XP_004164722.1| PREDICTED: uncharacterized LOC101205845, partial [Cucumis sativus]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/331 (65%), Positives = 259/331 (78%), Gaps = 9/331 (2%)

Query: 9   SVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKN 68
           S+LSD  +R  + + F A  L   VYFI + F+ K +     RW + +S  + K  TCKN
Sbjct: 2   SILSDAKNRLRIYTFFAALLLGAGVYFIANEFITKGS----FRWEVFYSAQNVKSSTCKN 57

Query: 69  QQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPM--NLLAIAAGIKQKKIVDQ 126
           Q CR PG+E+LPEGI+SKTSN E +PLW S   L N++P +  NLLAIA GIKQ+ +V +
Sbjct: 58  Q-CRPPGSESLPEGIISKTSNFEFQPLWGS--SLQNKKPKVSKNLLAIAVGIKQRHVVSK 114

Query: 127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
           I+ KFP  DF V+LFHYDGVVDEW++  W  RA+HVSA NQTKWWFAKRFLHPDIVAEYN
Sbjct: 115 IIEKFPQDDFDVILFHYDGVVDEWREFAWYSRALHVSALNQTKWWFAKRFLHPDIVAEYN 174

Query: 187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
           YIFLWDED+GV+ F+P+RY+SI+K+EGLEISQPALDPVKS+VH P+TAR+  SK HRR Y
Sbjct: 175 YIFLWDEDLGVDYFDPKRYISILKEEGLEISQPALDPVKSKVHQPLTARKTGSKVHRRFY 234

Query: 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQG 306
            +KG+GRC   ST PPC GWVEMMAPVFSRA WRC WYMIQNDLIHAWGLD QLGYCAQG
Sbjct: 235 NFKGAGRCYANSTGPPCTGWVEMMAPVFSRAGWRCTWYMIQNDLIHAWGLDRQLGYCAQG 294

Query: 307 DRTKNVGVVDSEYIVHLGLPTLGVTTEPELN 337
           DRTK VGVVD+EYIVHLGLPTLG + +  L+
Sbjct: 295 DRTKKVGVVDAEYIVHLGLPTLGASHDNALS 325

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735287|emb|CBI17649.3| unnamed protein product [Vitis vinifera]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/348 (63%), Positives = 269/348 (77%), Gaps = 6/348 (1%)

Query: 2   MKTTNSISVLSDPPSR-SCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYS 60
           MK  N +S L+D  SR SC+CS+F  A+++C ++FIGS  + ++  E+L RWG+   M +
Sbjct: 1   MKLPNCVSQLADSKSRRSCVCSIFPTASVLCLIFFIGSVLIGQDYSEKLSRWGMSTGMLN 60

Query: 61  AKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQ 120
           +    C+NQ CR  G+EALP+GIV  +S+L+MRPLW  P K  + +   NLLA+A G+KQ
Sbjct: 61  SVSNKCENQ-CRANGSEALPKGIVVTSSDLDMRPLWGFPKKRKDLK--RNLLAVAVGVKQ 117

Query: 121 KKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPD 180
           K +V+++V KF S  FVVMLFHYDGVVDEWKD  W DR +HV+A NQTKWWFAKRFLHP+
Sbjct: 118 KDLVNKMVEKFLSYGFVVMLFHYDGVVDEWKDFKWCDRVLHVAAINQTKWWFAKRFLHPE 177

Query: 181 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSK 240
           IVAEYNYIFLWDED+GV +FNPRRY++ V+ EGLEISQPALD  KSEVHH IT R R S 
Sbjct: 178 IVAEYNYIFLWDEDLGVTDFNPRRYVATVQREGLEISQPALDGSKSEVHHQITLRGRRSD 237

Query: 241 AHRRMYKYKGSGR-CDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
            HRR++K  GSG+ CD+ STAPPC GW+E+MAPVFSR AWRC WYMIQNDLIHAWGLD+Q
Sbjct: 238 VHRRIFKSSGSGKICDENSTAPPCTGWIEVMAPVFSREAWRCVWYMIQNDLIHAWGLDMQ 297

Query: 300 LGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLE 347
           LGYCAQGDRTKNVGVVDS+YIVH GLPTLG   +P+  T     DD E
Sbjct: 298 LGYCAQGDRTKNVGVVDSDYIVHYGLPTLG-ANDPDKTTPPVQDDDSE 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.889	0.850	0.660	8.9e-125
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.690	0.586	0.606	1.1e-87
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.696	0.609	0.593	3.3e-86
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.696	0.645	0.496	5.6e-68
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.677	0.633	0.494	2.4e-67
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.682	0.664	0.486	3.6e-66
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.666	0.663	0.482	5.2e-65
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.666	0.613	0.490	6.7e-65
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.669	0.628	0.490	1.4e-64
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.663	0.648	0.484	2.3e-64

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 228/345 (66%), Positives = 274/345 (79%)

Query:    16 SRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPE--------TCK 67
             +RSCLCS+ I  ALIC  YFI ++++AK+ KE+L++W +   M+++  +        TCK
Sbjct:     7 NRSCLCSVLITTALICGAYFICNAYLAKDFKEKLLKWEITDKMHNSTDKMQNATTTSTCK 66

Query:    68 NQQCRLPGTEALPEGIVSKTSNLEMRPLWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQ 126
             N   +  GTEALP+GI+ KTSNLE + LW+   +K       M+LLA+A GIKQK++V++
Sbjct:    67 NFN-KPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNK 125

Query:   127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
             +++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQTKWWFAKRFLHPDIVAEY 
Sbjct:   126 VIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYE 185

Query:   187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
             YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEVHHPITARR+ SK HRRMY
Sbjct:   186 YIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMY 245

Query:   247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQG 306
             KYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQG
Sbjct:   246 KYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQG 305

Query:   307 DRTKNVGVVDSEYIVHLGLPTLGV--TTEPELN--TVGQASDDLE 347
             DR KNVGVVD+EYI+H GLPTLGV  T    L   T  ++++ LE
Sbjct:   306 DRKKNVGVVDAEYIIHYGLPTLGVVETASSALRNETDSKSTESLE 350

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
 Identities = 159/262 (60%), Positives = 200/262 (76%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPM---NLLAIAAGIKQKKIVDQIVRKFPS 133
             + LP GI+   S+LE++PLWS  S L ++   M   NLLAI  G+KQK  VD +V+KF  
Sbjct:    83 KGLPRGIIQSRSDLELKPLWSRGS-LRSKGVEMTNRNLLAIPVGLKQKGNVDALVKKFLP 141

Query:   134 KDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDE 193
              +F ++LFHYDG +D+W DL W+ ++IH+ A NQTKWWFAKRFLHPD+V+ Y+YIFLWDE
Sbjct:   142 ANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFLHPDVVSIYDYIFLWDE 201

Query:   194 DIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGR 253
             D+GVENFNP RYL IVK  GLEISQPALD   +E+HH IT R +  K HRR+Y  +G  R
Sbjct:   202 DLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSKTKKFHRRVYINRGHKR 261

Query:   254 CDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVG 313
             C + S+ PPC G+VE MAPVFS+AAW C W +IQNDL+H WG+D++LGYCAQGDRTKNVG
Sbjct:   262 CSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMDMKLGYCAQGDRTKNVG 321

Query:   314 VVDSEYIVHLGLPTLGVTTEPE 335
             +VDSEYI+H G+ TLG +  PE
Sbjct:   322 IVDSEYILHQGIQTLGESV-PE 342

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 155/261 (59%), Positives = 197/261 (75%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPS--KLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             + LP GI+   S+LE++PLWSS S    + +    NLLA+  G+KQK  VD +V+KF   
Sbjct:    80 KGLPFGIMQPKSDLELKPLWSSSSLRSKSGELTNRNLLAMPVGLKQKDNVDAVVKKFLPA 139

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F V+LFHYDG +D+W DL W+ +AIH+ A NQTKWWFAKRFLHPDIV+ Y+Y+FLWDED
Sbjct:   140 NFTVILFHYDGNMDQWWDLEWSSKAIHIVAHNQTKWWFAKRFLHPDIVSIYDYVFLWDED 199

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVENFNP++YL IVK  GLEISQPAL P  +EVHH IT R R    HRR+Y  +G+ +C
Sbjct:   200 LGVENFNPQKYLRIVKTAGLEISQPALHPNSTEVHHRITVRSRTKIFHRRVYDSRGNMKC 259

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
              + S  PPC G+VE MAPVFSR+AW C W +IQNDL+H WG+D++LGYCAQGDR+K VG+
Sbjct:   260 SNASEGPPCTGFVEGMAPVFSRSAWFCTWNLIQNDLVHGWGMDMKLGYCAQGDRSKKVGI 319

Query:   315 VDSEYIVHLGLPTLGVTTEPE 335
             VDSEYI H G+ TLG +  P+
Sbjct:   320 VDSEYIFHQGIQTLGGSGYPD 340

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 132/266 (49%), Positives = 175/266 (65%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E L  GI++  S+  +R LW  P + +    P  L+A   G  QK  VD  V+KF SK
Sbjct:   107 GAEMLTPGIIAPESDYYLRRLWGLPEE-DVPVKPKYLIAFTVGFGQKVNVDACVKKF-SK 164

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW++L W+ RAIHVS   QTKWW+AKRFLHPDIVA Y+Y+F+WDED
Sbjct:   165 DFTIVLFHYDGRTTEWEELEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDED 224

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +G+ENF+   Y+ ++K  GLEISQPA++  K ++   IT R+   + H+   K K  GRC
Sbjct:   225 LGLENFDVEEYIRLIKKHGLEISQPAVES-KKKITWEITKRKTKGEVHKDA-KEK-PGRC 281

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
             +D    PPC  ++E+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GV
Sbjct:   282 ND-PHLPPCAAFIEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGV 339

Query:   315 VDSEYIVHLGLPTLGVTTEPELNTVG 340
             VDS++I+H  LP+LG   E +    G
Sbjct:   340 VDSQWIIHQSLPSLGSQGEAQDGKAG 365

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 130/263 (49%), Positives = 178/263 (67%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSK-LN-NQRPPMNLLAIAAGIKQKKIVDQIVRKFP 132
             G E LP  IV+  S+  +R LW  P++ L   QR    L+    G  Q+K +D +++KF 
Sbjct:    99 GAERLPPDIVTPESDFYLRRLWGDPNEDLTVKQR---YLVTFTVGYDQRKNIDTVLKKF- 154

Query:   133 SKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWD 192
             S +F +MLFHYDG   EW++  W+ RAIHVS   QTKWW+AKRFLHPDIVA Y YIF+WD
Sbjct:   155 SDNFSIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWD 214

Query:   193 EDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSG 252
             ED+GVE+F+  +YL++VK  GLEISQP L+P +  +   +T +R +++ H+  +  + +G
Sbjct:   215 EDLGVEHFDSEKYLAVVKKHGLEISQPGLEPYEG-LTWEMTKKRDDTEVHK--HAEERNG 271

Query:   253 RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNV 312
              C D    PPC  +VE+MAPVFSR AWRC W+MIQNDLIH WGLD  +  C Q    K +
Sbjct:   272 WCTD-PNLPPCAAFVEIMAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEK-I 329

Query:   313 GVVDSEYIVHLGLPTLGVTTEPE 335
             GVVD+++I+H G+P+LG   +PE
Sbjct:   330 GVVDAQWIIHQGVPSLGNQGQPE 352

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 127/261 (48%), Positives = 171/261 (65%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP GI+   ++  +R LW  PS+ + ++ P  L+    G +Q+  ++  V+KF S+
Sbjct:    90 GAELLPPGIIVAETDFYLRRLWGEPSE-DLKKKPKYLVTFTVGFEQRNNINAAVKKF-SE 147

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW    W+  AIH+SA  QTKWW+AKRFLHPD+V+ Y YIF+WDED
Sbjct:   148 DFQILLFHYDGRTTEWDQFEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDED 207

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN  RY+ +VK  GLEISQP L+P  + +   +T RR +   H+   K K  G C
Sbjct:   208 LGVEHFNADRYVELVKKHGLEISQPGLEP-NNGLTWEMTKRRGDRDVHKET-KEK-PGWC 264

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
              D    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GV
Sbjct:   265 SD-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGV 322

Query:   315 VDSEYIVHLGLPTLGVTTEPE 335
             VDS++I+H  +P+LG   E E
Sbjct:   323 VDSQWIIHQVIPSLGSQGESE 343

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 123/255 (48%), Positives = 170/255 (66%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP GIV   ++  +R LW  P++ + ++ P  L+    G +Q+  ++ +V+KF S+
Sbjct:    83 GAELLPPGIVVAKTDFYLRRLWGEPNE-DLKKKPKYLVTFTVGFEQRNHINGVVKKF-SE 140

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW    W+  AIH+S   QTKWW+AKRFLHPD+V+ Y YIF+WDED
Sbjct:   141 DFQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDED 200

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN  +Y+ +VK  GLEISQP L+P  + +   +T RR + + H+   K K  G C
Sbjct:   201 LGVEHFNADKYIELVKKHGLEISQPGLEP-NNGLTWEMTKRRGDREVHKDT-KEK-PGWC 257

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
              D    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GV
Sbjct:   258 KD-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGV 315

Query:   315 VDSEYIVHLGLPTLG 329
             VDS++I+H  +P+LG
Sbjct:   316 VDSQWIIHKVIPSLG 330

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
 Identities = 125/255 (49%), Positives = 167/255 (65%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP G+V+  S+  +R LW  P + + +  P  L     GI QK  +D  V+KF S+
Sbjct:   103 GAEMLPPGMVAAESDFYLRRLWGLPHE-DLKSEPRYLATFTVGINQKANIDACVKKF-SE 160

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F ++LFHYDG V EW +  W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED
Sbjct:   161 NFTIVLFHYDGRVTEWDEFEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDED 220

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN   Y+ +VK  GLEISQP L+P +  +   +T RR + + H+     +  G C
Sbjct:   221 LGVEHFNAEEYVKMVKKHGLEISQPGLEPNQG-LTWQMTKRRGDMEVHK--ITEERPGWC 277

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
              D    PPC  +VE+MAPVFSR AWRC W++IQNDL+H WGLD  L  C +    K +GV
Sbjct:   278 SD-PHLPPCAAFVEIMAPVFSRNAWRCVWHVIQNDLVHGWGLDFALRRCVEPAHEK-IGV 335

Query:   315 VDSEYIVHLGLPTLG 329
             VDS+++VH   P+LG
Sbjct:   336 VDSQWVVHQSFPSLG 350

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 125/255 (49%), Positives = 165/255 (64%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP   V+  S+  +R LW  P        P  L+A     +Q+K +D  V+KF S 
Sbjct:    97 GAEMLPPSFVAAESDFYLRRLWGLPKDDLPVVKPKYLVAFTVSYEQRKNIDACVKKF-SD 155

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F ++LFHYDG   E+ +  W+ RAIHVS   QTKWW+AKRFLHPDI+A Y YIF+WDED
Sbjct:   156 NFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIFIWDED 215

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVENF+   Y+ IV   GLEISQPA++  KS +   IT R    + H+ + +  G  RC
Sbjct:   216 LGVENFDAEEYIKIVNKHGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKPG--RC 272

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGV 314
             +D    PPC G++E+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GV
Sbjct:   273 ND-PHLPPCAGFIEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGV 330

Query:   315 VDSEYIVHLGLPTLG 329
             VDS++I+H  +P+LG
Sbjct:   331 VDSQWIIHQKIPSLG 345

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 123/254 (48%), Positives = 166/254 (65%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDF 136
             E LP GI++  S+L +R LW +P + +  + P  L     G  Q+  +D  V KF S++F
Sbjct:    81 ERLPSGIIASESDLYLRRLWGNPDE-DLVKQPRYLATFTVGYNQRHNIDACVSKF-SENF 138

Query:   137 VVMLFHYDGVVDEWKD-LVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDI 195
              ++LFHYDGV   W D   W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED+
Sbjct:   139 TIVLFHYDGVTSAWNDEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVARYDYIFIWDEDL 198

Query:   196 GVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCD 255
             GV++FN   Y+ IVK   LEISQP LDP ++  +  IT RR +S+ H+   +      C 
Sbjct:   199 GVDHFNAEEYIHIVKKHDLEISQPGLDP-ETGFNWQITKRREHSEVHKETDEKLDW--CS 255

Query:   256 DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVV 315
             +    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +    + +G+V
Sbjct:   256 N-PPRPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEEPAFEKIGIV 314

Query:   316 DSEYIVHLGLPTLG 329
             DS++IVH  +P+LG
Sbjct:   315 DSQWIVHQFIPSLG 328


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      372       372   0.00087  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  284 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.23u 0.16s 28.39t   Elapsed:  00:00:01
  Total cpu time:  28.23u 0.16s 28.39t   Elapsed:  00:00:01
  Start:  Sat May 11 10:28:04 2013   End:  Sat May 11 10:28:05 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	372
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-137

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  393 bits (1012), Expect = e-137
 Identities = 137/266 (51%), Positives = 170/266 (63%), Gaps = 6/266 (2%)

Query: 70  QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVR 129
                G E LP GIV   S+  +R LW SP + +    P  LLA   G  QK  VD  V+
Sbjct: 4   PTNPRGAERLPPGIVVSESDFYLRRLWGSPEE-DVASKPKYLLAFTVGYSQKANVDACVK 62

Query: 130 KFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIF 189
           KF S +F ++LFHYDG   EW +L W+ +AIHVSA  QTKWWFAKRFLHPDIVA Y YIF
Sbjct: 63  KF-SDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIF 121

Query: 190 LWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYK 249
           LWDED+GV+NF+   Y+ IVK  GLEISQP LDP + ++   IT RR + + H+   +  
Sbjct: 122 LWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKG 181

Query: 250 GSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRT 309
                   ST PPC G+VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C      
Sbjct: 182 RCCD---NSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAH 237

Query: 310 KNVGVVDSEYIVHLGLPTLGVTTEPE 335
           + +GVVDS+++VH G+P+LG     E
Sbjct: 238 EKIGVVDSQWVVHQGIPSLGSQGTAE 263

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	372
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	94.0
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	93.18
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	93.07
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	89.22
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	89.0
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	86.95
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	83.88
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	83.79
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	80.77
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	80.26

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=5e-123  Score=888.51  Aligned_cols=276  Identities=63%  Similarity=1.132  Sum_probs=265.4

Q ss_pred             cCCCCCCCCCCCCceecCCCcceecCCCCCCCCCCCCCCCcEEEEEecCccccchhHHhhcCCCCCcEEEEEEecCccCc
Q 017407           70 QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE  149 (372)
Q Consensus        70 q~~~~g~e~Lp~giv~~~sd~~lr~Lwg~p~~~~~~~~~k~Lla~~VG~kqk~~Vd~~v~kf~~~nFdvmLFhYDg~vd~  149 (372)
                      ||+|+|+|+||+|||+++||||||||||.|+++. +.++|||||||||+|||++||++|+|| ++|||||||||||+||+
T Consensus         4 ~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~-~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~   81 (294)
T PF05212_consen    4 PCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL-PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDE   81 (294)
T ss_pred             CCCCCccccCCCCccccCCCceeeecCCCccccc-cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCc
Confidence            8999999999999999999999999999999886 568899999999999999999999999 99999999999999999


Q ss_pred             ccccccccceeEEEeecccchhhhccccChhhhccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCCcee
Q 017407          150 WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH  229 (372)
Q Consensus       150 w~d~ews~~aiHvsa~kqtKWwfakRfLHPdiv~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~i~  229 (372)
                      |+|||||++||||++.|||||||||||||||+|++|||||||||||+||+|+|+|||+||++|||||||||||++++++|
T Consensus        82 w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~  161 (294)
T PF05212_consen   82 WDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIH  161 (294)
T ss_pred             hhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998999


Q ss_pred             ecccccccCcccceeeecccCCCCCCCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCC
Q 017407          230 HPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRT  309 (372)
Q Consensus       230 h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~  309 (372)
                      |+||+|++++++||.   .++.+.|.+++++||||||||||||||||+|||||||||||||+|||||||+|+||+ ++++
T Consensus       162 ~~iT~R~~~~~vhr~---~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~  237 (294)
T PF05212_consen  162 HPITKRRPDSEVHRK---TRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRH  237 (294)
T ss_pred             eeEEeecCCceeEec---cCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-cccc
Confidence            999999999999984   577888889999999999999999999999999999999999999999999999999 6899


Q ss_pred             CcEEEEeeeeEEEeccccCCCCCCCccc-----ccCCCchhHHhhhC
Q 017407          310 KNVGVVDSEYIVHLGLPTLGVTTEPELN-----TVGQASDDLEQIAN  351 (372)
Q Consensus       310 ~kiGVVDa~~VvH~g~Ptlg~~~~~~~~-----~~~~~~~~~~~~~~  351 (372)
                      +||||||||||+|+|+|||||++.+++.     .++.++++|+++|+
T Consensus       238 ~kiGVVDs~~VvH~gvptLG~~~~~~~~~~~~~~Vr~r~~~E~~~F~  284 (294)
T PF05212_consen  238 KKIGVVDSQYVVHTGVPTLGGQGNSEKGKDPREEVRRRSFAEMRIFQ  284 (294)
T ss_pred             ccEEEEeeEEEEEcCCCcCCCccccccCCchHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999876443     68889999999985

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.00  E-value=0.18  Score=43.59  Aligned_cols=99  Identities=17%  Similarity=0.250  Sum_probs=66.3

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCCceeecccccccCcccceeeecccCCCCCCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  262 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~~pp  262 (372)
                      +.+||+++.|+|..++..-++++.+.+++.+..+..|..-...+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            68999999999999998888888887764455444443221100                                   1


Q ss_pred             ccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEeccc
Q 017407          263 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLP  326 (372)
Q Consensus       263 cTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~g~P  326 (372)
                      +.++      +++|++|+.+ . .+.+.-..||=|.-+.+-+. ..+.++ .+.+..+.|....
T Consensus       123 ~~~~------~~~~~~~~~~-g-~~~~~~~~~~eD~~~~~r~~-~~G~~i-~~~~~~~~h~~~~  176 (202)
T cd04185         123 FVGV------LISRRVVEKI-G-LPDKEFFIWGDDTEYTLRAS-KAGPGI-YVPDAVVVHKTAI  176 (202)
T ss_pred             eEEE------EEeHHHHHHh-C-CCChhhhccchHHHHHHHHH-HcCCcE-EecceEEEEcccc
Confidence            1121      4889999876 2 24454567888887765443 246788 9999999999433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.18  E-value=0.22  Score=40.53  Aligned_cols=92  Identities=20%  Similarity=0.135  Sum_probs=61.7

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHh-CCcccCCCCCCCCCceeecccccccCcccceeeecccCCCCCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAP  261 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~~p  261 (372)
                      +.+|||++.|+|...+...+.++.+.+.+. +..+..+.                                         
T Consensus        73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------------------------  111 (166)
T cd04186          73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-----------------------------------------  111 (166)
T ss_pred             CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------------------
Confidence            389999999999999888788877754432 22222222                                         


Q ss_pred             CccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 017407          262 PCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL  323 (372)
Q Consensus       262 pcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~  323 (372)
                           +=.-+.+|++++|+.+=  .+++.-..+|-|..+...+. ..+.+|..+....+.|.
T Consensus       112 -----~~~~~~~~~~~~~~~~~--~~~~~~~~~~eD~~~~~~~~-~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         112 -----VSGAFLLVRREVFEEVG--GFDEDFFLYYEDVDLCLRAR-LAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             -----CceeeEeeeHHHHHHcC--CCChhhhccccHHHHHHHHH-HcCCeEEEccceEEEec
Confidence                 00124578999998753  23443334777887765543 24679999999999997

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=93.07  E-value=0.34  Score=44.91  Aligned_cols=127  Identities=15%  Similarity=0.056  Sum_probs=72.9

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHh--CCcccCCCC-CCCCCceeecccccccCcccceeeecccCCCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE--GLEISQPAL-DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  259 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~--gLeISQPAL-d~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~  259 (372)
                      +.+|||++.|+|..++.-.++++++.+++.  +.-+..|.. +.+.. ...+..... +  ...+.      .... ..+
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~------~~~~-~~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLD-G--LLLRQ------ISLD-GLT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeec-c--cceee------eccc-ccC
Confidence            479999999999999998899999988876  567777764 33221 111111111 1  00000      0000 001


Q ss_pred             CCCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 017407          260 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL  323 (372)
Q Consensus       260 ~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~  323 (372)
                      .+.-+.++=.-..+++|++++.+= + +++.--.++.|.-|..-+. ..+.++.++....+.|.
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~iG-~-fde~~fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~  201 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRLG-M-MDEELFIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHR  201 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHhC-C-ccHhhcccchHHHHHHHHH-HCCCEEEEeCCEEEEEe
Confidence            111111110012368999999873 3 3343344677887754333 24578999999999998

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=89.22  E-value=2.9  Score=39.33  Aligned_cols=143  Identities=13%  Similarity=0.075  Sum_probs=78.8

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCC-ceeeccccc-cc---CcccceeeecccCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPITAR-RR---NSKAHRRMYKYKGSGRCDDY  257 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~-~i~h~iT~R-~~---~~~vHrr~~~~~~~~~C~~~  257 (372)
                      +..|||.+.|.|..++..-++++++.+.+..-.+.-|.+..-.+ ...+.-... ..   ...++...........+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            78999999999999999999999999998877777777643211 122221111 00   00011000000000000111


Q ss_pred             CCCCCccceEEeecccccHHHHHHHhhhhcCCCcccch-hhhhhh-hhhcCCCCCcEEEEeeeeEEEecc-ccCC
Q 017407          258 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLG-YCAQGDRTKNVGVVDSEYIVHLGL-PTLG  329 (372)
Q Consensus       258 ~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWG-LDf~w~-~caqg~~~~kiGVVDa~~VvH~g~-Ptlg  329 (372)
                      +..|..+.++-.-+=+++|++|+.+= . +......|| =|.-+. ++.+  .+.+|-++-...|.|... +..+
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vG-g-fDe~~~~~~~ED~Dl~~R~~~--~G~~i~~~p~a~v~H~~~~~~~~  232 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELG-G-YDEGMDIWGGENLELSFKVWQ--CGGSIEIVPCSRVGHIFRRKRKP  232 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhC-C-CCCcccccCchhHHHHHHHHH--cCCeEEEeeccEEEEeccccCCC
Confidence            11222233333334468899998873 2 344455666 344442 2222  246899999999999866 4444

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=89.00  E-value=0.86  Score=40.21  Aligned_cols=126  Identities=14%  Similarity=0.133  Sum_probs=62.4

Q ss_pred             cccEEEEeccccccCCCCHHHHH---HHHH-HhCCcccCCCCCCCCCceeecccccccCcccceeeecccCCCCCCCCCC
Q 017407          184 EYNYIFLWDEDIGVENFNPRRYL---SIVK-DEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  259 (372)
Q Consensus       184 ~YDYIFLwDDDL~vd~f~i~ry~---~Ivr-~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~  259 (372)
                      .||||++.|+|..++...+++++   +... ...+.+.+|.............. +.....+  ..  ..    +..  .
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~--~~----~~~--~  143 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKL--RI--QK----EGE--E  143 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccc--ee--cc----ccc--C
Confidence            68999999999999988888885   2222 22344555543322111111110 0000000  00  00    000  0


Q ss_pred             CCCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 017407          260 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL  323 (372)
Q Consensus       260 ~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~  323 (372)
                      ..+-..++=.-+-+|+|++++.+=.  +.+.....|-|+.+...+. ..+.++..+....|.|.
T Consensus       144 ~~~~~~~~~~~~~~~rr~~~~~~gg--fd~~~~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         144 GLKEVDFLITSGSLISLEALEKVGG--FDEDLFIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             CceEeeeeeccceEEcHHHHHHhCC--CCHHHcCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence            0000001111112589999988732  2222223455777654443 24578999998888887

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=86.95  E-value=2.1  Score=37.63  Aligned_cols=128  Identities=9%  Similarity=-0.042  Sum_probs=68.8

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCCceeecccccccCcccceeeecccCCCCCCCC-CCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY-STAP  261 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~-~~~p  261 (372)
                      +.+|||.+.|+|..++...+++.++..++.+..+.+................+.....+     ........... ....
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  154 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPL-----GSGGSAYRGGAVKIGY  154 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchh-----ccCCcccccccccccc
Confidence            47999999999999998889999988888887776655432111011100000000000     00000000000 0000


Q ss_pred             CccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhh-hhhcCCCCCcEEEEeeeeEEEec
Q 017407          262 PCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLG  324 (372)
Q Consensus       262 pcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~-~caqg~~~~kiGVVDa~~VvH~g  324 (372)
                      .+++.  .|  +|+|++|+.+= . +++ ....|-|+.+. ++.+  .+.++..+....+.|..
T Consensus       155 ~~~~~--~~--~~~~~~~~~~g-~-~~~-~~~~~eD~~l~~r~~~--~G~~~~~~~~~~~~~~~  209 (249)
T cd02525         155 VDTVH--HG--AYRREVFEKVG-G-FDE-SLVRNEDAELNYRLRK--AGYKIWLSPDIRVYYYP  209 (249)
T ss_pred             ccccc--cc--eEEHHHHHHhC-C-CCc-ccCccchhHHHHHHHH--cCcEEEEcCCeEEEEcC
Confidence            01110  01  57899998763 2 222 23346787775 3443  36789999999998883

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=83.88  E-value=1.4  Score=38.67  Aligned_cols=93  Identities=18%  Similarity=0.156  Sum_probs=55.0

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCCceeecccccccCcccceeeecccCCCCCCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  262 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~~~~~pp  262 (372)
                      +.+|||++.|.|..++...+.++++...       +|..+--.+.                          |        
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~-------~~~~~~v~~~--------------------------~--------  123 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLM-------DPGVGLVTCL--------------------------C--------  123 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhh-------CCCCCeEEee--------------------------c--------
Confidence            6799999999998887777776665442       2322211110                          0        


Q ss_pred             ccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 017407          263 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL  323 (372)
Q Consensus       263 cTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~  323 (372)
                      ++    ..+=+|+|++++.+=.+  .....-.+=|+.+...+. ..+.++..++...+.|.
T Consensus       124 ~~----g~~~~~r~~~~~~~ggf--~~~~~~~~eD~~l~~rl~-~~G~~i~~~~~~~~~~~  177 (196)
T cd02520         124 AF----GKSMALRREVLDAIGGF--EAFADYLAEDYFLGKLIW-RLGYRVVLSPYVVMQPL  177 (196)
T ss_pred             cc----CceeeeEHHHHHhccCh--HHHhHHHHHHHHHHHHHH-HcCCeEEEcchheeccC
Confidence            00    12347889999876322  221223467888876654 24678988888544443

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=83.79  E-value=1.7  Score=38.25  Aligned_cols=124  Identities=18%  Similarity=0.118  Sum_probs=62.7

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCCCCCceeecccccccCc--ccceeeecccCCCCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNS--KAHRRMYKYKGSGRCDDYSTA  260 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~--~vHrr~~~~~~~~~C~~~~~~  260 (372)
                      ..+|||++.|+|..++...+.++++.+...+..+.|+........  ..++.-....  .-|....    .  .......
T Consensus        85 ~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~--~~~~~~~  156 (228)
T PF13641_consen   85 ARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHLRFR----S--GRRALGV  156 (228)
T ss_dssp             ---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETTTS-----T--T-B----
T ss_pred             cCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhhhhh----h--hhcccce
Confidence            569999999999999999999999999778888888665332211  1111111000  0000000    0  0000011


Q ss_pred             CCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 017407          261 PPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL  323 (372)
Q Consensus       261 ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~  323 (372)
                      +.++|    -+=+|+|++++.+-.  ++.  ..-|=|+.+...+.. .+.++.......|.|.
T Consensus       157 ~~~~G----~~~~~rr~~~~~~g~--fd~--~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~  210 (228)
T PF13641_consen  157 AFLSG----SGMLFRRSALEEVGG--FDP--FILGEDFDLCLRLRA-AGWRIVYAPDALVYHE  210 (228)
T ss_dssp             S-B------TEEEEEHHHHHHH-S----S--SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE-
T ss_pred             eeccC----cEEEEEHHHHHHhCC--CCC--CCcccHHHHHHHHHH-CCCcEEEECCcEEEEe
Confidence            12222    123689999998852  344  445588888654432 4679999998888888

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=80.77  E-value=1.8  Score=37.67  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=26.8

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHhCCcccC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQ  218 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQ  218 (372)
                      +..|||++.|+|..++...+.++++.+.+.+-.+..
T Consensus        77 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  112 (224)
T cd06442          77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVI  112 (224)
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEE
Confidence            566999999999888777777777776555555443

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=80.26  E-value=1.2  Score=39.01  Aligned_cols=125  Identities=12%  Similarity=-0.004  Sum_probs=72.1

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHH-hCCcccCCCCC--CCCCceeeccccccc--CcccceeeecccCCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQPALD--PVKSEVHHPITARRR--NSKAHRRMYKYKGSGRCDDY  257 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~-~gLeISQPALd--~~s~~i~h~iT~R~~--~~~vHrr~~~~~~~~~C~~~  257 (372)
                      +.+|||.+.|+|..++...+.++++.+.+ .++.+.++...  .... .. .+.....  ...+.+....  +...+   
T Consensus        83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~--~~~~~---  155 (234)
T cd06421          83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDP-FD-WLADGAPNEQELFYGVIQP--GRDRW---  155 (234)
T ss_pred             CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCc-ch-hHHHHHHHHHHHHHHHHHH--HHhhc---
Confidence            58999999999999999999999999987 77777776521  1111 10 1111100  0000000000  00000   


Q ss_pred             CCCCCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEec
Q 017407          258 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  324 (372)
Q Consensus       258 ~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~g  324 (372)
                          ++ .++=.+.=+|+|++++.+-.+  ++  ...+-|+.+..-+. ..+.+|..++...+.|..
T Consensus       156 ----~~-~~~~g~~~~~r~~~~~~ig~~--~~--~~~~eD~~l~~r~~-~~g~~i~~~~~~~~~~~~  212 (234)
T cd06421         156 ----GA-AFCCGSGAVVRREALDEIGGF--PT--DSVTEDLATSLRLH-AKGWRSVYVPEPLAAGLA  212 (234)
T ss_pred             ----CC-ceecCceeeEeHHHHHHhCCC--Cc--cceeccHHHHHHHH-HcCceEEEecCccccccC
Confidence                11 122234457899999987532  22  34578988874332 245689888888888774

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	372
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 40/284 (14%), Positives = 77/284 (27%), Gaps = 87/284 (30%)

Query: 12  SDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQC 71
            D P      +         S+  I  S   ++       W   H          ++   
Sbjct: 316 QDLPREVLTTNP-----RRLSI--IAESI--RDGLATWDNW--KHVNCDKLTTIIESSLN 364

Query: 72  RLPGTEA---------LPEG--IVSKTSNLEMRPLWSSPSK--------------LNNQR 106
            L   E           P    I +    L +  +W    K              L  ++
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTIL--LSL--IWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 107 PPMNLLAI----------AAGIKQ--KKIVDQ--IVRKFPSKDFVVM-----LFHYDG-- 145
           P  + ++I                  + IVD   I + F S D +        + + G  
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 146 -----VVDEWK-------DLVWADRAI-HVSAANQTKWWFAKRFLHPDI--VAEY-NYIF 189
                  +          D  + ++ I H S A     W A   +   +  +  Y  YI 
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA-----WNASGSILNTLQQLKFYKPYIC 535

Query: 190 LWDED-----IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEV 228
             D         + +F P+   +++  +  ++ + AL      +
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 38/233 (16%), Positives = 65/233 (27%), Gaps = 65/233 (27%)

Query: 119 KQKKIV----DQIVRKFPSK---DFVVMLF---HYDGVVDEWKDLVWADRAIHVSAANQT 168
           + K I+    D  V  F  K   D    +      D ++     +    R      + Q 
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 169 KWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNP----RRYLSIVKDEGLEISQPALDPV 224
           +    ++F+  + V   NY FL    I  E   P    R Y+     + L          
Sbjct: 77  E--MVQKFV--EEVLRINYKFLMSP-IKTEQRQPSMMTRMYIEQR--DRLYNDNQVFAKY 129

Query: 225 KSEVHHPITARRRNSKAHRR--------MYKYKGSGR-------CDDYSTAPPCIGWVEM 269
                 P    R+     R         +    GSG+       C  Y         V+ 
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKTWVALDVCLSYK--------VQC 178

Query: 270 MAP--VFSRAAW----RC----AWYMIQNDLIHAWGLDIQLGYCAQGDRTKNV 312
                +F    W     C        +   L++     I   + ++ D + N+
Sbjct: 179 KMDFKIF----WLNLKNCNSPETVLEMLQKLLY----QIDPNWTSRSDHSSNI 223

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	372
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	87.28
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	82.19

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=87.28  E-value=1.7  Score=37.28  Aligned_cols=120  Identities=8%  Similarity=-0.068  Sum_probs=68.6

Q ss_pred             ccccEEEEeccccccCCCCHHHHHHHHHHh-CCcccCCCC-----CCCCCceeecccccccCcccceeeecccCCCCCCC
Q 017407          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD  256 (372)
Q Consensus       183 ~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~R~~~~~vHrr~~~~~~~~~C~~  256 (372)
                      +..|||++.|+|..++...++++++.++++ +..+..+..     +.+. ...+.. .+ +...+.          .   
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~----------~---  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR-DIVKET-VR-PAAQVT----------W---  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-EE-CCCSCB----------S---
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCC-cchhhc-cC-chHHHH----------H---
Confidence            688999999999999988899999999876 666665543     2221 111110 00 000000          0   


Q ss_pred             CCCCCCccceEEeecccccHHHHHHHh-hh--hcC-CCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEecc
Q 017407          257 YSTAPPCIGWVEMMAPVFSRAAWRCAW-YM--IQN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGL  325 (372)
Q Consensus       257 ~~~~ppcTgFVEiMAPVFSR~Awrcvw-hm--iqN-DLvhGWGLDf~w~~caqg~~~~kiGVVDa~~VvH~g~  325 (372)
                           ....++-..+=+|+|++++.+- .+  ..+ +.....+-|+.+...+.. .+ ++..++...+.|+..
T Consensus       151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~~  216 (255)
T 1qg8_A          151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYIT  216 (255)
T ss_dssp             -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEEC
T ss_pred             -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEEc
Confidence                 0111222234578999998763 21  011 222334567776544432 23 699999998888843

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=82.19  E-value=1.6  Score=42.04  Aligned_cols=140  Identities=14%  Similarity=0.076  Sum_probs=72.0

Q ss_pred             hccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCC---CCCCceeec----ccccccCcccceeeecccC---C
Q 017407          182 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHP----ITARRRNSKAHRRMYKYKG---S  251 (372)
Q Consensus       182 v~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd---~~s~~i~h~----iT~R~~~~~vHrr~~~~~~---~  251 (372)
                      .+..|||++.|+|..++..-++++++.+++..-.+..|.++   .+.  +.+.    .+...-....+........   .
T Consensus       112 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (472)
T 1xhb_A          112 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDT--FEYMAGSDMTYGGFNWKLNFRWYPVPQREMD  189 (472)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSS--CCEECCCTTEEEEECTTCCEEEEECCHHHHH
T ss_pred             hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCC--ceeccCCCcccceeeccceeecccCCHHHHh
Confidence            36799999999999999999999999998876555556542   211  1110    0000000000000000000   0


Q ss_pred             CCCCCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccch-hhhhhhhhhcCCCCCcEEEEeeeeEEEecccc
Q 017407          252 GRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT  327 (372)
Q Consensus       252 ~~C~~~~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWG-LDf~w~~caqg~~~~kiGVVDa~~VvH~g~Pt  327 (372)
                      .+- .....+-.+.++-..+=+|+|++|+.+=  -+++....|| =|+-+..-+. ..+.+|.++....|.|..+.+
T Consensus       190 ~~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~R~~-~~G~~i~~~p~~~v~H~~~~~  262 (472)
T 1xhb_A          190 RRK-GDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIW-QCGGTLEIVTCSHVGHVFRKA  262 (472)
T ss_dssp             HTT-TCTTSCEECSBCCSSSEEEEHHHHHHTT--SCCTTSCTTCCCCSHHHHHHH-HTTCEEEEEEEEEEEEEC---
T ss_pred             ccc-CCCCCcccCccccceeEEEEHHHHHHcC--CCCCcccccCchhHHHHHHHH-hcCCeEEEccCcEEEEEccCc
Confidence            000 0001111111222222357999998874  2455556674 3544432222 134699999999999986554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	372
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	83.44

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.44  E-value=0.68  Score=39.77  Aligned_cols=143  Identities=14%  Similarity=0.026  Sum_probs=74.9

Q ss_pred             hccccEEEEeccccccCCCCHHHHHHHHHHhCCcccCCCCCC---CCCcee--ecccccccCcccce--eeecccCCCCC
Q 017407          182 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDP---VKSEVH--HPITARRRNSKAHR--RMYKYKGSGRC  254 (372)
Q Consensus       182 v~~YDYIFLwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~---~s~~i~--h~iT~R~~~~~vHr--r~~~~~~~~~C  254 (372)
                      .+.-|||++.|+|..++.-.++++++.+++..-.+..|.++.   +.....  ...+...-....+.  ..+........
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            478899999999999999999999999998887777776432   110000  00000000000000  00000000000


Q ss_pred             CCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccch-hh--hhhhhhhcCCCCCcEEEEeeeeEEEeccccCC
Q 017407          255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LD--IQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG  329 (372)
Q Consensus       255 ~~~~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWG-LD--f~w~~caqg~~~~kiGVVDa~~VvH~g~Ptlg  329 (372)
                      ....+.|..+.++..-+=.++|++|..+= . +++....|| =|  +-+.-..   .+.+|..+-...|.|..+-..+
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vG-g-fDe~~~~~g~ED~Dl~~R~~~---~G~~i~~~p~~~v~H~~~~~~~  257 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIG-T-YDAGMDIWGGENLEISFRIWQ---CGGTLEIVTCSHVGHVFRKATP  257 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTT-S-CCTTSCTTCCCCSHHHHHHHH---TTCEEEEEEEEEEEEEC-----
T ss_pred             ccccccccccceecceeeeeeHHHHHHhC-C-CCCCCcCcCchHHHHHHHHHH---hCCeEEEeCCeEEEEeCCCCCC
Confidence            11112222233333323347899999873 2 456556675 34  4444333   3568999999999998554443