Citrus Sinensis ID: 017438
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | 2.2.26 [Sep-21-2011] | |||||||
| A0LE04 | 285 | Bifunctional protein FolD | yes | no | 0.762 | 0.992 | 0.584 | 2e-86 | |
| B3EJG9 | 298 | Bifunctional protein FolD | yes | no | 0.781 | 0.973 | 0.544 | 1e-84 | |
| B9M769 | 280 | Bifunctional protein FolD | yes | no | 0.749 | 0.992 | 0.554 | 5e-84 | |
| B4S820 | 295 | Bifunctional protein FolD | yes | no | 0.778 | 0.979 | 0.518 | 1e-83 | |
| A5GAM5 | 280 | Bifunctional protein FolD | yes | no | 0.749 | 0.992 | 0.550 | 3e-83 | |
| O96553 | 968 | C-1-tetrahydrofolate synt | yes | no | 0.776 | 0.297 | 0.551 | 4e-83 | |
| Q2RIB4 | 280 | Bifunctional protein FolD | yes | no | 0.746 | 0.989 | 0.562 | 2e-82 | |
| A7HSV9 | 298 | Bifunctional protein FolD | yes | no | 0.770 | 0.959 | 0.532 | 5e-82 | |
| A1BF67 | 295 | Bifunctional protein FolD | yes | no | 0.781 | 0.983 | 0.510 | 5e-82 | |
| A4SER8 | 295 | Bifunctional protein FolD | yes | no | 0.778 | 0.979 | 0.522 | 7e-82 |
| >sp|A0LE04|FOLD_MAGSM Bifunctional protein FolD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 201/291 (69%), Gaps = 8/291 (2%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
A VIDGKA+A+ +R+E+ EV R+K + PGLAV+LVG S YVRNKK+AC++ G
Sbjct: 2 AHVIDGKAIAQSVREELRMEVERLKLNHQLTPGLAVVLVGADPASQVYVRNKKRACETAG 61
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
I SF L TS+ E+L I N D +VHGILVQLPLP HIDEQ +L A+S KD DG
Sbjct: 62 IASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADG 121
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP N+GRL +P F PCTP G +E+L G D KGK AVVIGRSNIVG P AL+L
Sbjct: 122 FHPYNVGRLVT--GDPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLL 179
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
ATV+I HSRT + E ++ADI+++AVG+ NMV GSWIK GAV+IDVGIN ED K
Sbjct: 180 AAHATVTICHSRTPDLAETVKRADIVVAAVGRANMVPGSWIKKGAVVIDVGINRGEDGK- 238
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370
L GDV Y E ASAITPVPGGVGPMTIAMLL NT+ AKR HN
Sbjct: 239 -----LCGDVDYASCFEHASAITPVPGGVGPMTIAMLLKNTVEGAKRAHNI 284
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Magnetococcus sp. (strain MC-1) (taxid: 156889) EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 9 |
| >sp|B3EJG9|FOLD_CHLPB Bifunctional protein FolD OS=Chlorobium phaeobacteroides (strain BS1) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 199/294 (67%), Gaps = 4/294 (1%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK V+ ++ E+ V + VPGL VI+VG+ S YVRNK K+C+ +G+N
Sbjct: 3 IIDGKQVSANLKQELKTAVEACRQKTDAVPGLTVIIVGEDPASQVYVRNKSKSCKEIGMN 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LP +T+E E+L I N+D VHGILVQ PLP HID+ ++ A+ KDVDGFH
Sbjct: 63 STVIELPAETTEAELLAGIEALNNDNDVHGILVQQPLPAHIDDYAVTMAILPSKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA-LLLQR 260
P N+G++ + + FI CTP G +EL RY + KGK VVIGRSNIVG P A L+LQ+
Sbjct: 123 PENVGQMVLGNLDKCFISCTPYGILELFSRYSIETKGKHCVVIGRSNIVGKPMANLMLQK 182
Query: 261 ---EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
+ TV+I HS T N EITRQADI+I+A+G+P V IKPGAV+IDVGIN VED
Sbjct: 183 LKESNCTVTICHSATSNMPEITRQADIVIAAIGRPEYVTEDMIKPGAVVIDVGINRVEDP 242
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
GYRLVGDV YE + ASAITPVPGGVGPMTIAMLL NTL S RVHN +
Sbjct: 243 SRKSGYRLVGDVDYENVNKKASAITPVPGGVGPMTIAMLLKNTLQSFMRVHNIE 296
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Chlorobium phaeobacteroides (strain BS1) (taxid: 331678) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|B9M769|FOLD_GEOSF Bifunctional protein FolD OS=Geobacter sp. (strain FRC-32) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 311 bits (797), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 205/287 (71%), Gaps = 9/287 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
AK+IDGKA+A +IR EIT EV+++ A G+ PGLAV+LVG+ S YV K+KAC+ VG
Sbjct: 2 AKIIDGKAIAAKIRGEITAEVAKLA-AQGITPGLAVVLVGEDPASKVYVSMKEKACKDVG 60
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
I S E LP +T+E+E+L+ I N D +HGILVQLPLP I+ + +L A+S EKD DG
Sbjct: 61 IFSDEYKLPAETTEEELLQLIDKLNKDRKIHGILVQLPLPKQINTEKVLEAISPEKDADG 120
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP N+GRL + +PLF PCTP G + +L G D+ GK VV+GRSNIVG P A +
Sbjct: 121 FHPYNVGRLVIG--KPLFQPCTPYGVMVMLKETGVDLAGKEVVVVGRSNIVGKPVAFMCL 178
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+++ATV++ HS+T++ AD++I+AVGQP M++G+WIK GAV+IDVG+N V + K
Sbjct: 179 QQNATVTLCHSKTRDLAAKVAMADVVIAAVGQPEMIKGAWIKKGAVVIDVGVNRVGEKK- 237
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
LVGDV YE A ASAITPVPGGVGPMTI MLL NTL SAKR
Sbjct: 238 -----LVGDVEYEAASARASAITPVPGGVGPMTITMLLYNTLESAKR 279
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Geobacter sp. (strain FRC-32) (taxid: 316067) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|B4S820|FOLD_PROA2 Bifunctional protein FolD OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 202/293 (68%), Gaps = 4/293 (1%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK V+ +++E+ V +K G VPGL VI+VG+ S YVRNK K+C+ G+N
Sbjct: 3 LIDGKKVSTDLKNELKTRVEELKAKAGCVPGLTVIIVGEDPASQVYVRNKAKSCKETGMN 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LP +T+++E+L I N DP VHGILVQ PLP HI+E ++ A+ KDVDGFH
Sbjct: 63 STVIELPAETTQEELLGKIEALNQDPDVHGILVQQPLPSHIEEYAVTMAIDPAKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA-LLLQR 260
P N+G++ + + FI CTP G +ELL RY + +GK VV+GRSNIVG P A L+LQ+
Sbjct: 123 PENVGQMVLGNLDKCFISCTPFGILELLRRYDIETRGKHCVVVGRSNIVGKPMANLMLQK 182
Query: 261 ---EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
+ TV++ HS T+N E+TRQADI+I+A+G+ N + +KPGAV+IDVGIN +ED
Sbjct: 183 LRETNCTVTVCHSATQNMPELTRQADILIAAIGRANFITREMVKPGAVVIDVGINRIEDP 242
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370
G+RL GDV ++ E+ASAITPVPGGVGPMTIAMLL NTL S R HN
Sbjct: 243 SRKSGFRLAGDVDFDNVAEMASAITPVPGGVGPMTIAMLLKNTLQSFARSHNL 295
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Prosthecochloris aestuarii (strain DSM 271 / SK 413) (taxid: 290512) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|A5GAM5|FOLD_GEOUR Bifunctional protein FolD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 308 bits (790), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 204/287 (71%), Gaps = 9/287 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
AK+IDGKA+A +IR EIT EV+++ GV PGLAV+LVG+ S YV K+KAC+ VG
Sbjct: 2 AKIIDGKAIAAKIRGEITAEVAKLASK-GVTPGLAVVLVGEDPASKVYVSMKEKACKDVG 60
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
I S E LP DTSE ++L I N DP +HGIL+QLPLP ID + +L A+S EKD DG
Sbjct: 61 IFSDEYKLPVDTSEADLLLLIHKLNSDPKIHGILIQLPLPKQIDTEKVLEAISPEKDADG 120
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP N+GRL + +PLF PCTP G + +L G ++ GK VV+GRSNIVG P A +
Sbjct: 121 FHPYNVGRLVI--GKPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCL 178
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+++ATV++ HS+T++ AD++I+AVGQP M++G+WIK GAV+IDVG+N V + K
Sbjct: 179 QQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMIKGAWIKEGAVVIDVGVNRVGEKK- 237
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
LVGDV ++ A E ASAITPVPGGVGPMTI MLL NTL +AKR
Sbjct: 238 -----LVGDVEFDAAAERASAITPVPGGVGPMTITMLLYNTLEAAKR 279
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Geobacter uraniireducens (strain Rf4) (taxid: 351605) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|O96553|C1TC_DROME C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4 | Back alignment and function description |
|---|
Score = 308 bits (790), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 204/292 (69%), Gaps = 4/292 (1%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRM-KDAIGVVPGLAVILVGDRKDSATYVRNKKKACQ 136
+ AK+I G AVAK IR+E+ EV+ M K VPGL ++ VG R+DS Y+R K KA
Sbjct: 36 SGAKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAAT 95
Query: 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSME 194
+GI++ V LP +E E+L I+ N+DP VHGI+VQ+PL C ID I +AVS E
Sbjct: 96 EIGIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPE 155
Query: 195 KDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPA 254
KDVDG H +N GRLA+ G F+PCTP GC+EL+ R G +I G RAVV+GRS IVG PA
Sbjct: 156 KDVDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPA 214
Query: 255 ALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
A LL+ +ATV++ HS+T+N EEITR ADI++ +G MV+GSWIKPGAV+ID GIN
Sbjct: 215 AELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVK 274
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
DA G +LVGDV Y EA +VA +TPVPGGVGPMT+AML+ NT+ SA R
Sbjct: 275 PDASKASGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAAR 326
|
Drosophila melanogaster (taxid: 7227) EC: 6 EC: . EC: 3 EC: . EC: 4 EC: . EC: 3 |
| >sp|Q2RIB4|FOLD_MOOTA Bifunctional protein FolD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 209/288 (72%), Gaps = 11/288 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
A+++DGK +A ++R E+ EVSR+K A G+ PGLAV+LVG+ S YVRNK +AC+ VG
Sbjct: 3 AQILDGKKIAAEVRAEVKEEVSRLK-AEGINPGLAVVLVGEDPASQVYVRNKHRACEEVG 61
Query: 140 INSFEVH-LPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
I S EVH LP TS+ E+LK I N DP +HGILVQLPLP HIDE+ +++A+++EKDVD
Sbjct: 62 IYS-EVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVD 120
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GF P N+G L + + F PCTP GC+ LL + G D KGK+AVV+GRSNIVG P A++L
Sbjct: 121 GFSPANVGNLVIGDK--CFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMML 178
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
ATV+I HSRT++ RQADI+I+AVG+P ++ G IK GAV+IDVGIN V + K
Sbjct: 179 LARHATVTICHSRTRDLAAECRQADILIAAVGKPELITGDMIKEGAVVIDVGINRVGEKK 238
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
LVGDV +E A + A ITPVPGGVGPMTIAMLL NT+ +A+R
Sbjct: 239 ------LVGDVHFESAAQKAGWITPVPGGVGPMTIAMLLKNTVEAARR 280
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Moorella thermoacetica (strain ATCC 39073) (taxid: 264732) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|A7HSV9|FOLD_PARL1 Bifunctional protein FolD OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 305 bits (780), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/289 (53%), Positives = 202/289 (69%), Gaps = 3/289 (1%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A +IDGK +A ++R + EV+R+K + PGLAV+LVG+ S YVRNK A
Sbjct: 2 TATIIDGKIIATELRARVAVEVARLKKDHSLTPGLAVVLVGNDPASEVYVRNKGIATTEA 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G+NSFE LP +TSE +VL + N DP+VHG LVQ P+P HI +Q++++A+ KD D
Sbjct: 62 GMNSFEFKLPAETSEADVLAKVRELNADPAVHGFLVQFPVPNHISQQAVIDAIDPVKDAD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
G HPLN GRLA P +P TP+GC+ + R G D+ GK AV+IGRSN+VG P A LL
Sbjct: 122 GLHPLNAGRLA--SGLPAMVPATPEGCVIMAKRAGGDLSGKHAVIIGRSNLVGKPVAQLL 179
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
+E+ TV+I HSR+++ I RQADI+++AVG+P MVRG W+KPGAV+IDVGIN V +
Sbjct: 180 LKENCTVTIAHSRSRDLPSIARQADILVAAVGRPGMVRGDWVKPGAVVIDVGINRVPAPE 239
Query: 319 SPRG-YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
G RLVGDV ++EA EVA AITPVPGGVG MT+A LL NT+ +A R
Sbjct: 240 KGEGKTRLVGDVLFDEAAEVAGAITPVPGGVGLMTVACLLRNTVIAACR 288
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) (taxid: 402881) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|A1BF67|FOLD_CHLPD Bifunctional protein FolD OS=Chlorobium phaeobacteroides (strain DSM 266) GN=folD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 305 bits (780), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 206/294 (70%), Gaps = 4/294 (1%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
++IDGK +++ +++E+ +V+ + +IG VPGL VI+VG S YVRNK K+C +G+
Sbjct: 2 QIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGM 61
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
+S + +P DT ++ +L+ I N DP+VHGILVQ PLP IDE ++ A+ KDVDGF
Sbjct: 62 HSTVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGF 121
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA-LLLQ 259
HP N+GRL M + F+ CTP G +ELL RY + KGK VV+GRSNIVG P A L++Q
Sbjct: 122 HPENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQ 181
Query: 260 REDA---TVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316
+ DA TV++ HS T++ T+QADI+I+A+G+ + +KPGAV+IDVGIN +ED
Sbjct: 182 KLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKPGAVVIDVGINRIED 241
Query: 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370
+ GYRLVGDV Y+ +ASAITPVPGGVGPMTIAMLL NTL S +R++N
Sbjct: 242 PSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRRINNL 295
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Chlorobium phaeobacteroides (strain DSM 266) (taxid: 290317) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
| >sp|A4SER8|FOLD_PROVI Bifunctional protein FolD OS=Prosthecochloris vibrioformis (strain DSM 265) GN=folD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (778), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 200/293 (68%), Gaps = 4/293 (1%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK V+ +++DE+ V R ++ G VPGL VI+VG+ S YVRNK K C+ +G+N
Sbjct: 3 IIDGKKVSLELKDELKASVDRYRETTGKVPGLTVIIVGEDPASQVYVRNKAKTCKEIGMN 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + +P DT E+ +L I+ N DP+VHGILVQ PLP IDE ++ A+ +KDVDGFH
Sbjct: 63 SSVITMPADTPEEHLLDTIASLNLDPAVHGILVQQPLPEQIDEFAVTLAIDPQKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALL---- 257
P N+GRL M + F+ CTP G +ELL RYG + GK VV+GRSNIVG P A L
Sbjct: 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYGIETSGKHCVVVGRSNIVGKPMANLMLQK 182
Query: 258 LQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
L+R + TV+I HS T++ TRQADI+I+A+G+ + +K GAV+IDVGIN ++D
Sbjct: 183 LKRSNCTVTICHSATQDIASYTRQADILIAAIGRAKFITPDMVKEGAVVIDVGINRIDDP 242
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370
+ G RLVGDV YE +ASA+TPVPGGVGPMTIAMLL NTL S +R HN
Sbjct: 243 TTKSGTRLVGDVDYEGVSALASAMTPVPGGVGPMTIAMLLKNTLHSFERTHNL 295
|
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate. Prosthecochloris vibrioformis (strain DSM 265) (taxid: 290318) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | ||||||
| 255586321 | 366 | methylenetetrahydrofolate dehydrogenase, | 0.970 | 0.983 | 0.8 | 1e-165 | |
| 224067864 | 367 | tetrahydrofolate dehydrogenase/cyclohydr | 0.986 | 0.997 | 0.779 | 1e-163 | |
| 449433091 | 363 | PREDICTED: bifunctional protein FolD-lik | 0.970 | 0.991 | 0.786 | 1e-161 | |
| 15236888 | 360 | Amino acid dehydrogenase family protein | 0.954 | 0.983 | 0.764 | 1e-154 | |
| 297810105 | 361 | hypothetical protein ARALYDRAFT_490506 [ | 0.954 | 0.980 | 0.762 | 1e-154 | |
| 225454113 | 389 | PREDICTED: bifunctional protein FolD [Vi | 0.948 | 0.904 | 0.702 | 1e-152 | |
| 84468380 | 350 | putative tetrahydrofolate synthase [Trif | 0.900 | 0.954 | 0.8 | 1e-151 | |
| 363808352 | 342 | uncharacterized protein LOC100797215 [Gl | 0.859 | 0.932 | 0.793 | 1e-148 | |
| 358248028 | 345 | uncharacterized protein LOC100819231 [Gl | 0.865 | 0.930 | 0.787 | 1e-148 | |
| 357507199 | 351 | Bifunctional protein folD [Medicago trun | 0.897 | 0.948 | 0.789 | 1e-145 |
| >gi|255586321|ref|XP_002533811.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis] gi|223526248|gb|EEF28564.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust.
Identities = 296/370 (80%), Positives = 325/370 (87%), Gaps = 10/370 (2%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRT----TLTVHS 61
S+ F DCSSS T RL F R+ G++ RRL + P S+RT T+++ S
Sbjct: 3 SVTFTDCSSSATPRLRLFNRTATFHRNGSITFARRL------AGPLSVRTICFGTVSIGS 56
Query: 62 SPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDR 121
S + S PV+NA+MASE AKVIDGK VA +IR+EIT EVSRMKD IGVVPGLAVILVGDR
Sbjct: 57 SSTASSPVINASMASETGAKVIDGKLVAMKIREEITVEVSRMKDEIGVVPGLAVILVGDR 116
Query: 122 KDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH 181
KDSATYVRNKKKAC SVGINSFE +LPED++EQEVLK IS FN DPSVHGILVQLPLP H
Sbjct: 117 KDSATYVRNKKKACDSVGINSFEANLPEDSTEQEVLKFISGFNSDPSVHGILVQLPLPSH 176
Query: 182 IDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241
+++Q+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRYG +IKGKRA
Sbjct: 177 MNDQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVEIKGKRA 236
Query: 242 VVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK 301
VVIGRSNIVGMPAAL+LQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRG+WIK
Sbjct: 237 VVIGRSNIVGMPAALMLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGNWIK 296
Query: 302 PGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTL 361
PGAV+IDVGINPVEDAKSPRGYRLVGDVCYEEAC+VASA+TPVPGGVGPMTIAMLLSNTL
Sbjct: 297 PGAVVIDVGINPVEDAKSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTL 356
Query: 362 TSAKRVHNFQ 371
TSAKRVHNFQ
Sbjct: 357 TSAKRVHNFQ 366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224067864|ref|XP_002302571.1| tetrahydrofolate dehydrogenase/cyclohydrolase [Populus trichocarpa] gi|222844297|gb|EEE81844.1| tetrahydrofolate dehydrogenase/cyclohydrolase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/368 (77%), Positives = 320/368 (86%), Gaps = 2/368 (0%)
Query: 4 SRSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSP 63
S S++F D S+ST + L+PF R G R + V P + + LRT L+V+SS
Sbjct: 2 SSSLVFIDSSTSTASHLLPFSRISTPFNGAVSLRRSVGPLNVRPFVLSPLRT-LSVNSSN 60
Query: 64 SPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKD 123
+PS PV+N EASAKVIDGK VAKQIRDEIT EV +MK+AIGVVPGLAVILVGDRKD
Sbjct: 61 NPS-PVINDKSGGEASAKVIDGKMVAKQIRDEITAEVLKMKEAIGVVPGLAVILVGDRKD 119
Query: 124 SATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHID 183
SATYVRNKKKAC+SVGINSFEV LPED++EQEV+K IS FN+DPSVHGILVQLPLP H+D
Sbjct: 120 SATYVRNKKKACESVGINSFEVRLPEDSTEQEVIKFISEFNNDPSVHGILVQLPLPSHMD 179
Query: 184 EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVV 243
EQ++LNAV +EKDVDGFHPLNIGRLAMRGR+PLF+PCTPKGCIELLHRY +IKGKRAVV
Sbjct: 180 EQNVLNAVDIEKDVDGFHPLNIGRLAMRGRDPLFVPCTPKGCIELLHRYDVEIKGKRAVV 239
Query: 244 IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPG 303
IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI + ADIIISAVGQPNMVRGSW+KPG
Sbjct: 240 IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIIKHADIIISAVGQPNMVRGSWLKPG 299
Query: 304 AVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTS 363
AV+IDVGINPVEDA SPRGY+LVGDVCYEEAC+VASA+TPVPGGVGPMTIAMLLSNTL+S
Sbjct: 300 AVVIDVGINPVEDANSPRGYKLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLSS 359
Query: 364 AKRVHNFQ 371
AKR HNFQ
Sbjct: 360 AKRTHNFQ 367
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433091|ref|XP_004134331.1| PREDICTED: bifunctional protein FolD-like [Cucumis sativus] gi|449480371|ref|XP_004155875.1| PREDICTED: bifunctional protein FolD-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 288/366 (78%), Positives = 319/366 (87%), Gaps = 6/366 (1%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSP 65
SM F DCS STT RL P R+RL GA+ R L S PA RT V S +
Sbjct: 4 SMKFTDCSPSTTVRLFPSARTRLPSFDGAVLFHRLLD----RSRPAFPRTF--VSRSSAS 57
Query: 66 SLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSA 125
+LPV++A++++EA+A+VIDGK VAKQIR+EIT EVSRMKDAIGVVPGLAVILVGDRKDSA
Sbjct: 58 TLPVISASISTEATAEVIDGKLVAKQIREEITAEVSRMKDAIGVVPGLAVILVGDRKDSA 117
Query: 126 TYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQ 185
TYVRNKKKAC+SVGI SFEV+LPED +EQEVLK+IS FNDDPSVHGILVQLPLP H++EQ
Sbjct: 118 TYVRNKKKACESVGIKSFEVNLPEDCTEQEVLKYISDFNDDPSVHGILVQLPLPKHMNEQ 177
Query: 186 SILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIG 245
+IL+AVS+EKDVDGFHPLNIGRLAMRG EPLF+PCTPKGCIELLHRY IKGKRAVVIG
Sbjct: 178 NILHAVSIEKDVDGFHPLNIGRLAMRGEEPLFVPCTPKGCIELLHRYNIGIKGKRAVVIG 237
Query: 246 RSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAV 305
RSNIVG PAALLLQ EDATVS+VHSRTK+PEE+TRQADIIISAVG+ NMV+GSWIKPGAV
Sbjct: 238 RSNIVGTPAALLLQGEDATVSVVHSRTKDPEELTRQADIIISAVGKANMVKGSWIKPGAV 297
Query: 306 IIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
IIDVGINPVEDA SPRGYRLVGDVCYEEA ++ASAITPVPGGVGPMTIAMLLSNTLT+AK
Sbjct: 298 IIDVGINPVEDASSPRGYRLVGDVCYEEASKIASAITPVPGGVGPMTIAMLLSNTLTAAK 357
Query: 366 RVHNFQ 371
R HNFQ
Sbjct: 358 RTHNFQ 363
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15236888|ref|NP_191971.1| Amino acid dehydrogenase family protein [Arabidopsis thaliana] gi|3047116|gb|AAC13627.1| F6N23.26 gene product [Arabidopsis thaliana] gi|7267401|emb|CAB80871.1| putative tetrahydrofolate synthase [Arabidopsis thaliana] gi|16649149|gb|AAL24426.1| Unknown protein [Arabidopsis thaliana] gi|23197716|gb|AAN15385.1| Unknown protein [Arabidopsis thaliana] gi|332656510|gb|AEE81910.1| Amino acid dehydrogenase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/370 (76%), Positives = 312/370 (84%), Gaps = 16/370 (4%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLT----VHS 61
SM+F DCSS+TT+RL+ RS G R+ VG L+TT +
Sbjct: 3 SMMFTDCSSTTTSRLIHLNRS-----SGTFLLRQ----CVGQ---LRLQTTASGRGCCIR 50
Query: 62 SPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDR 121
S S + ++A SE A VIDGKAVAK+IRDEIT EVSRMK++IGV+PGLAVILVGDR
Sbjct: 51 SSSSPISSISADTKSEGGAIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDR 110
Query: 122 KDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH 181
KDSATYVRNKKKAC SVGI SFEV L ED+SE+EVLK +S FNDDPSVHGILVQLPLP H
Sbjct: 111 KDSATYVRNKKKACDSVGIKSFEVRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSH 170
Query: 182 IDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241
+DEQ+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRY +IKGKRA
Sbjct: 171 MDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKRA 230
Query: 242 VVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK 301
VVIGRSNIVGMPAALLLQREDATVSI+HSRTKNPEEITR+ADIIISAVGQPNMVRGSWIK
Sbjct: 231 VVIGRSNIVGMPAALLLQREDATVSIIHSRTKNPEEITREADIIISAVGQPNMVRGSWIK 290
Query: 302 PGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTL 361
PGAV+IDVGINPVED + RGYRLVGD+CYEEA +VASAITPVPGGVGPMTIAMLLSNTL
Sbjct: 291 PGAVLIDVGINPVEDPSAARGYRLVGDICYEEASKVASAITPVPGGVGPMTIAMLLSNTL 350
Query: 362 TSAKRVHNFQ 371
TSAKR+HNFQ
Sbjct: 351 TSAKRIHNFQ 360
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810105|ref|XP_002872936.1| hypothetical protein ARALYDRAFT_490506 [Arabidopsis lyrata subsp. lyrata] gi|297318773|gb|EFH49195.1| hypothetical protein ARALYDRAFT_490506 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/371 (76%), Positives = 309/371 (83%), Gaps = 17/371 (4%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARR-----RLHVGVGPSLPASLRTTLTVH 60
S++F DCSSSTT+RL+ R G R+ RL AS R
Sbjct: 3 SLMFTDCSSSTTSRLIHLNRR-----SGTFLLRQCVGQLRLQT------TASGRGCCICS 51
Query: 61 SSPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGD 120
SS S + T +SE A VIDGKAVAK+IRDEIT EVSRMK++IGV+PGLAVILVGD
Sbjct: 52 SSSPISAISAD-TKSSEGVAIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGD 110
Query: 121 RKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC 180
RKDSATYVRNKKKAC SVGI SFEV L ED+SE+EVLK +S FN DPSVHGILVQLPLP
Sbjct: 111 RKDSATYVRNKKKACDSVGIKSFEVCLAEDSSEEEVLKSVSAFNGDPSVHGILVQLPLPS 170
Query: 181 HIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240
H+DEQ+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRY +IKGKR
Sbjct: 171 HMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKR 230
Query: 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI 300
AVVIGRSNIVGMPAALLLQREDATVSI+HSRTKNPEEITR+ADIII+AVGQPNMVRGSWI
Sbjct: 231 AVVIGRSNIVGMPAALLLQREDATVSIIHSRTKNPEEITREADIIIAAVGQPNMVRGSWI 290
Query: 301 KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNT 360
KPGAVIIDVGINPVED + RGYRLVGD+CYEEAC+VASAITPVPGGVGPMTIAMLLSNT
Sbjct: 291 KPGAVIIDVGINPVEDPSAARGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNT 350
Query: 361 LTSAKRVHNFQ 371
LTSAKR+HNFQ
Sbjct: 351 LTSAKRIHNFQ 361
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454113|ref|XP_002269224.1| PREDICTED: bifunctional protein FolD [Vitis vinifera] gi|297745230|emb|CBI40310.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/400 (70%), Positives = 310/400 (77%), Gaps = 48/400 (12%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSP 65
SM FADCS+S R F R R RR L PS+P L L V P
Sbjct: 4 SMAFADCSTSAPTRTFLFSRLR---------PRRGL-----PSIPPHLLRGLPVAGFRLP 49
Query: 66 SLPVMN----------------------------------ATMASEASAKVIDGKAVAKQ 91
SL + N A +++EASA VIDGK++AK+
Sbjct: 50 SLRITNSPSSFPKGNAFLRNKQGFRHFRPFTVLASVSASEAAISTEASAMVIDGKSIAKE 109
Query: 92 IRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT 151
IR EIT E+SRMKD IGV+PGLAVILVGDRKDS TYVRNKKKAC+SVGI S+EV LPED+
Sbjct: 110 IRHEITTEISRMKDEIGVIPGLAVILVGDRKDSTTYVRNKKKACESVGIKSYEVCLPEDS 169
Query: 152 SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMR 211
+E+EVLK IS FNDDP VHGILVQLPLP H++EQ+ILNAVS+EKDVDGFHPLNIGRLAMR
Sbjct: 170 TEEEVLKFISGFNDDPEVHGILVQLPLPSHMNEQNILNAVSIEKDVDGFHPLNIGRLAMR 229
Query: 212 GREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271
GREPLF+PCTPKGCIELLHR DIKGK+AVVIGRSNIVGMPAALLL REDATVSIVHSR
Sbjct: 230 GREPLFVPCTPKGCIELLHRCNIDIKGKQAVVIGRSNIVGMPAALLLLREDATVSIVHSR 289
Query: 272 TKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCY 331
TKNPEE+T QADIII+AVGQPNMVRGSWIKPGAVIIDVGINPVEDA SPRGYRLVGDVCY
Sbjct: 290 TKNPEEVTSQADIIIAAVGQPNMVRGSWIKPGAVIIDVGINPVEDATSPRGYRLVGDVCY 349
Query: 332 EEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
EEAC++ASA+TPVPGGVGPMTIAMLLSNTL+SAKR+HNFQ
Sbjct: 350 EEACKIASAVTPVPGGVGPMTIAMLLSNTLSSAKRMHNFQ 389
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84468380|dbj|BAE71273.1| putative tetrahydrofolate synthase [Trifolium pratense] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/340 (80%), Positives = 300/340 (88%), Gaps = 6/340 (1%)
Query: 34 ALCARRRLH-VGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEAS-AKVIDGKAVAKQ 91
AL RR H + VGP+ SLR LT S+P S V A A+EAS AKVIDGK VAKQ
Sbjct: 15 ALLLRRTRHPIHVGPT---SLRF-LTSQSAPPSSHLVSFAASATEASVAKVIDGKLVAKQ 70
Query: 92 IRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT 151
IRDEI EVSRMK+A+GV+PGLAVILVGDRKDSATYVRNKKKAC+SVGINS EV+LP DT
Sbjct: 71 IRDEIAAEVSRMKEAVGVIPGLAVILVGDRKDSATYVRNKKKACESVGINSLEVNLPADT 130
Query: 152 SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMR 211
+E++VL +IS +NDDPSVHGILVQLPLP H++EQ++LNAV +EKDVDGFHPLNIGRLAMR
Sbjct: 131 TEEQVLNYISGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFHPLNIGRLAMR 190
Query: 212 GREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271
GREPLF+PCTPKGCIELLHRYG IKGKRAVVIGRSNIVGMPAALLLQREDATVS+VHSR
Sbjct: 191 GREPLFVPCTPKGCIELLHRYGISIKGKRAVVIGRSNIVGMPAALLLQREDATVSVVHSR 250
Query: 272 TKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCY 331
T NPEEITRQADIII+AVGQPNMVRGSWIKP AVIIDVGINPV+D S RGY+LVGDVCY
Sbjct: 251 TSNPEEITRQADIIIAAVGQPNMVRGSWIKPDAVIIDVGINPVDDPSSSRGYKLVGDVCY 310
Query: 332 EEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
EEA +VASAITPVPGGVGPMTIAMLL NTLTSAKR+++FQ
Sbjct: 311 EEAIKVASAITPVPGGVGPMTIAMLLQNTLTSAKRINSFQ 350
|
Source: Trifolium pratense Species: Trifolium pratense Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363808352|ref|NP_001241997.1| uncharacterized protein LOC100797215 [Glycine max] gi|255641405|gb|ACU20979.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/330 (79%), Positives = 290/330 (87%), Gaps = 11/330 (3%)
Query: 42 HVGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVS 101
VGVGP T+L SS S+ A MA ++SAKVIDGK+VAKQIRDEIT EVS
Sbjct: 24 QVGVGP-------TSLRFSSSHVASV----AAMAMDSSAKVIDGKSVAKQIRDEITAEVS 72
Query: 102 RMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 161
RM+++IGV+PGLAVILVGDRKDSATYVRNKKKAC+SVGINS E +LPED++E+EVL +I+
Sbjct: 73 RMRESIGVIPGLAVILVGDRKDSATYVRNKKKACESVGINSLEANLPEDSTEEEVLNYIA 132
Query: 162 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCT 221
+NDDPSVHGILVQLPLP H++EQ+ILNAV +EKDVDGFHPLNIGRLAMRGREPLF+PCT
Sbjct: 133 GYNDDPSVHGILVQLPLPSHMNEQNILNAVRIEKDVDGFHPLNIGRLAMRGREPLFVPCT 192
Query: 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQ 281
PKGCIELLHRY IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT NPEEI RQ
Sbjct: 193 PKGCIELLHRYNASIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTSNPEEIIRQ 252
Query: 282 ADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAI 341
ADIII+AVGQ NMVRGSWIKPGAVIIDVGINPVED SPRGY+LVGDVCYEEA +ASA+
Sbjct: 253 ADIIIAAVGQANMVRGSWIKPGAVIIDVGINPVEDPNSPRGYKLVGDVCYEEAIRIASAV 312
Query: 342 TPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
TPVPGGVGP TIAMLL NTL SAKRVH+F+
Sbjct: 313 TPVPGGVGPTTIAMLLQNTLISAKRVHHFE 342
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248028|ref|NP_001239795.1| uncharacterized protein LOC100819231 [Glycine max] gi|255648103|gb|ACU24506.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/334 (78%), Positives = 294/334 (88%), Gaps = 13/334 (3%)
Query: 40 RLH--VGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEIT 97
RLH VG+GP+ ++ S S PV A MA+++S KVIDGK+VAKQIRDEIT
Sbjct: 23 RLHRQVGLGPT---------SLGFSSSHVAPV--AVMATDSSFKVIDGKSVAKQIRDEIT 71
Query: 98 GEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157
EVSRM+++IGV+PGLAVILVGDRKDSATYVRNKKKAC+SVGINS E +LPE+++E+EVL
Sbjct: 72 AEVSRMRESIGVIPGLAVILVGDRKDSATYVRNKKKACESVGINSLEANLPENSTEEEVL 131
Query: 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLF 217
+I+ +NDDPSVHGILVQLPLP H++EQ+ILNAV +EKDVDGFHPLNIGRLAMRGREPLF
Sbjct: 132 NYIAGYNDDPSVHGILVQLPLPSHMNEQNILNAVRIEKDVDGFHPLNIGRLAMRGREPLF 191
Query: 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE 277
+PCTPKGCIELLHRY IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT NPEE
Sbjct: 192 VPCTPKGCIELLHRYNVSIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTSNPEE 251
Query: 278 ITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV 337
I RQADIII+AVGQ NMVRGSWIKPGAVIIDVGINPVED SPRGY+LVGDVCYEEA +
Sbjct: 252 IIRQADIIIAAVGQANMVRGSWIKPGAVIIDVGINPVEDPNSPRGYKLVGDVCYEEAIRI 311
Query: 338 ASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
ASA+TPVPGGVGPMTIAMLL NTL SAKRVHNF+
Sbjct: 312 ASAVTPVPGGVGPMTIAMLLQNTLISAKRVHNFE 345
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507199|ref|XP_003623888.1| Bifunctional protein folD [Medicago truncatula] gi|355498903|gb|AES80106.1| Bifunctional protein folD [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/338 (78%), Positives = 299/338 (88%), Gaps = 5/338 (1%)
Query: 35 LCARRRLHVGVGPSLPASLRTTLTVHSSPSPS-LPVMNATMASEASAKVIDGKAVAKQIR 93
L RRR + VGP+ SLR T+HSSPS S + + A+ +SAKVIDGK VAKQIR
Sbjct: 18 LLLRRRHPINVGPT---SLRF-FTIHSSPSSSRVLSIAASATEASSAKVIDGKTVAKQIR 73
Query: 94 DEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSE 153
DEI EVSRM++A GV+PGLAVILVGDRKDSATYVRNKKKAC++VGINS EV+LPED++E
Sbjct: 74 DEIAVEVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGINSLEVNLPEDSTE 133
Query: 154 QEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGR 213
+EVL HI+ +NDDPSVHGILVQLPLP H++EQ++LNAV +EKDVDGFHPLNIGRLAMRGR
Sbjct: 134 EEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFHPLNIGRLAMRGR 193
Query: 214 EPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273
EPLF+PCTPKGCIELLHRYG IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT
Sbjct: 194 EPLFVPCTPKGCIELLHRYGVSIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTT 253
Query: 274 NPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEE 333
NPEEI RQADIII+AVGQPNMV+GSWIKPGAVIIDVGINPV+D S RGY+LVGDVCYEE
Sbjct: 254 NPEEIIRQADIIIAAVGQPNMVKGSWIKPGAVIIDVGINPVDDPSSSRGYKLVGDVCYEE 313
Query: 334 ACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
A +VASAITPVPGGVGPMTIAMLL NTL SAKR+H+F+
Sbjct: 314 AVKVASAITPVPGGVGPMTIAMLLQNTLISAKRIHSFE 351
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | ||||||
| TAIR|locus:2127113 | 360 | EMB3127 "EMBRYO DEFECTIVE 3127 | 0.962 | 0.991 | 0.776 | 4.2e-143 | |
| TAIR|locus:2127083 | 310 | AT4G00600 [Arabidopsis thalian | 0.687 | 0.822 | 0.768 | 3.5e-107 | |
| TAIR|locus:2064143 | 352 | AT2G38660 [Arabidopsis thalian | 0.816 | 0.860 | 0.649 | 1.6e-104 | |
| TAIR|locus:2082254 | 299 | AT3G12290 [Arabidopsis thalian | 0.789 | 0.979 | 0.634 | 3.1e-99 | |
| DICTYBASE|DDB_G0283121 | 292 | DDB_G0283121 "methenyl tetrahy | 0.754 | 0.958 | 0.566 | 9.4e-82 | |
| FB|FBgn0020385 | 968 | pug "pugilist" [Drosophila mel | 0.776 | 0.297 | 0.551 | 1.7e-80 | |
| ASPGD|ASPL0000036964 | 1031 | AN2998 [Emericella nidulans (t | 0.811 | 0.291 | 0.518 | 2.5e-79 | |
| POMBASE|SPBC839.16 | 937 | SPBC839.16 "C1-5,6,7,8-tetrahy | 0.773 | 0.306 | 0.506 | 2.5e-77 | |
| MGI|MGI:1342005 | 935 | Mthfd1 "methylenetetrahydrofol | 0.778 | 0.309 | 0.5 | 2.9e-76 | |
| TIGR_CMR|SPO_1559 | 296 | SPO_1559 "methylenetetrahydrof | 0.765 | 0.959 | 0.539 | 6.3e-76 |
| TAIR|locus:2127113 EMB3127 "EMBRYO DEFECTIVE 3127" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 285/367 (77%), Positives = 314/367 (85%)
Query: 6 SMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVG-VGPSLPASLRTTLTVHSSPS 64
SM+F DCSS+TT+RL+ RS G R+ VG + AS R + SS S
Sbjct: 3 SMMFTDCSSTTTSRLIHLNRS-----SGTFLLRQC--VGQLRLQTTASGRGCC-IRSSSS 54
Query: 65 PSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDS 124
P + ++A SE A VIDGKAVAK+IRDEIT EVSRMK++IGV+PGLAVILVGDRKDS
Sbjct: 55 P-ISSISADTKSEGGAIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRKDS 113
Query: 125 ATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDE 184
ATYVRNKKKAC SVGI SFEV L ED+SE+EVLK +S FNDDPSVHGILVQLPLP H+DE
Sbjct: 114 ATYVRNKKKACDSVGIKSFEVRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSHMDE 173
Query: 185 QSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVI 244
Q+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRY +IKGKRAVVI
Sbjct: 174 QNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVI 233
Query: 245 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGA 304
GRSNIVGMPAALLLQREDATVSI+HSRTKNPEEITR+ADIIISAVGQPNMVRGSWIKPGA
Sbjct: 234 GRSNIVGMPAALLLQREDATVSIIHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGA 293
Query: 305 VIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364
V+IDVGINPVED + RGYRLVGD+CYEEA +VASAITPVPGGVGPMTIAMLLSNTLTSA
Sbjct: 294 VLIDVGINPVEDPSAARGYRLVGDICYEEASKVASAITPVPGGVGPMTIAMLLSNTLTSA 353
Query: 365 KRVHNFQ 371
KR+HNFQ
Sbjct: 354 KRIHNFQ 360
|
|
| TAIR|locus:2127083 AT4G00600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1005 (358.8 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 196/255 (76%), Positives = 220/255 (86%)
Query: 117 LVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQL 176
+V D K A +R+ K S S V ED+SE+EVLK++S FNDDPSVHG+LVQL
Sbjct: 56 IVIDGKAEAKKIRDDIKIEVSRMKESIGVVPAEDSSEEEVLKYVSGFNDDPSVHGVLVQL 115
Query: 177 PLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI 236
PLP H+DEQ+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRY +
Sbjct: 116 PLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEF 175
Query: 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVR 296
KGKRAVVIGRSNIVGMPAALLLQ+EDATVSI+HSRT NPEE+TRQADI+ISAVG+PNMVR
Sbjct: 176 KGKRAVVIGRSNIVGMPAALLLQKEDATVSIIHSRTMNPEELTRQADILISAVGKPNMVR 235
Query: 297 GSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAML 356
GSWIKPGAV+IDVGI PVED + G RLVGD+CY EA ++ASAITPVPG VGPMTIAML
Sbjct: 236 GSWIKPGAVLIDVGIKPVEDPSAAGGERLVGDICYVEASKIASAITPVPGDVGPMTIAML 295
Query: 357 LSNTLTSAKRVHNFQ 371
LSNTLTSAKR+HNFQ
Sbjct: 296 LSNTLTSAKRIHNFQ 310
|
|
| TAIR|locus:2064143 AT2G38660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 200/308 (64%), Positives = 241/308 (78%)
Query: 60 HSSPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVG 119
+S P P PV + +E VIDG +A++IR +I EV +MK A+G VPGLAV+LVG
Sbjct: 48 YSDPPP--PV---SFETEQKTVVIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVG 102
Query: 120 DRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLP 179
+++DS TYVRNK KAC+ GI S LPED +E +++ + FN+D S+HGILVQLPLP
Sbjct: 103 EQRDSQTYVRNKIKACEETGIKSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLP 162
Query: 180 CHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239
H++E ILN V +EKDVDGFHPLN+G LAMRGREPLF+ CTPKGC+ELL R G +I GK
Sbjct: 163 QHLNESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRTGVEIAGK 222
Query: 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSW 299
AVVIGRSNIVG+P +LLLQR DATVS VH+ TK+PE ITR+ADI+I+A G PN+VRGSW
Sbjct: 223 NAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSW 282
Query: 300 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSN 359
+KPGAV+IDVG PVED+ GYRLVGDVCYEEA VASAITPVPGGVGPMTI MLL N
Sbjct: 283 LKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCN 342
Query: 360 TLTSAKRV 367
TL +AKR+
Sbjct: 343 TLEAAKRI 350
|
|
| TAIR|locus:2082254 AT3G12290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 186/293 (63%), Positives = 231/293 (78%)
Query: 75 ASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKA 134
+S+ +AK+IDGKA+A IR EI EV + + G VPGLAV++VG RKDS TYV K+KA
Sbjct: 4 SSDHTAKIIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTYVNTKRKA 63
Query: 135 CQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSME 194
C VGI SF+V LPE+ SE +++ + N +P VHGILVQLPLP HI+E+ IL A+S++
Sbjct: 64 CAEVGIKSFDVGLPEEVSEADLISKVHELNSNPDVHGILVQLPLPKHINEEHILGAISID 123
Query: 195 KDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPA 254
KDVDGFHPLNIG+LAM+GREPLF+PCTPKGC+ELL R G IKG+RAVV+GRSNIVG+P
Sbjct: 124 KDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVGLPV 183
Query: 255 ALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
+LLL + DATV+ VHS TK+PE I R+ADI+I+A GQ +M++G+WIKPGA +IDVG N V
Sbjct: 184 SLLLLKADATVTTVHSHTKDPEAIIREADIVIAACGQAHMIKGNWIKPGAAVIDVGTNAV 243
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367
D GYRLVGDV + EA +VA ITPVPGGVGPMT+AMLL NT+ AKRV
Sbjct: 244 SDPSKKSGYRLVGDVDFAEASKVAGFITPVPGGVGPMTVAMLLRNTVDGAKRV 296
|
|
| DICTYBASE|DDB_G0283121 DDB_G0283121 "methenyl tetrahydrofolate cyclohydrolase / NADP-dependent methylene H4F dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 162/286 (56%), Positives = 209/286 (73%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
K+IDGK ++ Q+++ I E++ MK+ P L VILVGDRKDS TYVRNKKK +GI
Sbjct: 9 KIIDGKEISSQVKESIKDEITLMKEKGLRAPCLVVILVGDRKDSQTYVRNKKKTASDLGI 68
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
NS ++ LPE T++QE++ + ++ V GILVQLPLP HI+E+ IL + KDVDGF
Sbjct: 69 NSIDILLPEQTTQQELIDLVQSYSKKDDVDGILVQLPLPSHINEEIILTQIDESKDVDGF 128
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
HP+NIG+LAMRGR+ F PCTPKGCIE+L R G +I GK AVV+GRSNIVG+P ++LL
Sbjct: 129 HPVNIGKLAMRGRKADFEPCTPKGCIEMLDRSGIEIAGKNAVVLGRSNIVGLPVSMLLLS 188
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
DATV+I HS+T N +E R+ADI++ A+G+ +V+ W+K GAV+IDVG+N E+ K
Sbjct: 189 RDATVTICHSKTPNLKEKCREADILVVAIGKAKLVKKDWVKTGAVVIDVGMNTDENNK-- 246
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
L GDV Y E EVAS ITPVPGGVGPMTIAML+ NTL SAK+
Sbjct: 247 ----LCGDVDYNEVKEVASYITPVPGGVGPMTIAMLMKNTLESAKK 288
|
|
| FB|FBgn0020385 pug "pugilist" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 785 (281.4 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 161/292 (55%), Positives = 204/292 (69%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRM-KDAIGVVPGLAVILVGDRKDSATYVRNKKKACQ 136
+ AK+I G AVAK IR+E+ EV+ M K VPGL ++ VG R+DS Y+R K KA
Sbjct: 36 SGAKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAAT 95
Query: 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSME 194
+GI++ V LP +E E+L I+ N+DP VHGI+VQ+PL C ID I +AVS E
Sbjct: 96 EIGIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPE 155
Query: 195 KDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPA 254
KDVDG H +N GRLA+ G F+PCTP GC+EL+ R G +I G RAVV+GRS IVG PA
Sbjct: 156 KDVDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPA 214
Query: 255 ALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
A LL+ +ATV++ HS+T+N EEITR ADI++ +G MV+GSWIKPGAV+ID GIN
Sbjct: 215 AELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVK 274
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
DA G +LVGDV Y EA +VA +TPVPGGVGPMT+AML+ NT+ SA R
Sbjct: 275 PDASKASGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAAR 326
|
|
| ASPGD|ASPL0000036964 AN2998 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 775 (277.9 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 158/305 (51%), Positives = 205/305 (67%)
Query: 65 PSLPVMNATMASEASAKV---IDGKAVAKQIRDEITGEVSRMKDAIG-VVPGLAVILVGD 120
P+LP T +S A V IDG +AK IR + E+ ++++ P L + VGD
Sbjct: 77 PALPCQRRTFSSTGVAMVAEKIDGTQIAKDIRAGLKDEIQKIQEINPRFKPSLVIFQVGD 136
Query: 121 RKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC 180
R DS+TYVR K KA + I V+ PE ++ E+L+ IS N+DPSVHGILVQLPLP
Sbjct: 137 RSDSSTYVRMKLKAAEEANILCKIVNFPESITQPEILQEISQANNDPSVHGILVQLPLPQ 196
Query: 181 HIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240
H+ E ++ +AV+ EKDVDGF +NIG LA RG PLF+PCTPK + LL G D GK
Sbjct: 197 HLSEHAVTSAVADEKDVDGFGAINIGELAKRGGRPLFVPCTPKAVMVLLKASGVDPAGKE 256
Query: 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI 300
AVV+GRS+IVG P + LL+ DATV++ HS+T + ++ADI+++A+G+ V+G WI
Sbjct: 257 AVVLGRSDIVGSPVSYLLKNADATVTVCHSKTPDIASAVKKADIVVAAIGKTEFVKGDWI 316
Query: 301 KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNT 360
KPGAV+IDVGIN D+ G RLVGDV YE A +VAS ITPVPGGVGPMT+AMLL N
Sbjct: 317 KPGAVVIDVGINYKPDSTKKSGQRLVGDVEYESASQVASKITPVPGGVGPMTVAMLLENV 376
Query: 361 LTSAK 365
+ SAK
Sbjct: 377 VASAK 381
|
|
| POMBASE|SPBC839.16 SPBC839.16 "C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 753 (270.1 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 146/288 (50%), Positives = 203/288 (70%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVP-GLAVILVGDRKDSATYVRNKKKACQSV 138
A +++G ++A+++R+E+ ++S +K L +I VG R+DS YVR K +A
Sbjct: 2 ALLLEGTSLARKVREELREQISSIKSVDPYFNVSLKIIQVGGREDSNVYVRMKTRAANEA 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI+ V+ PED +E ++L I FN+DP+VHGI+VQLPLP HI+EQ I AV+ EKDVD
Sbjct: 62 GISCEHVNFPEDITEYDLLLAIKGFNEDPTVHGIIVQLPLPAHINEQIITEAVAPEKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GF N+G+L R +PLF CTPKG + +L YG +++GK AVVIGRSNIVG P ++LL
Sbjct: 122 GFCETNLGKLTKREGQPLFTACTPKGIMCILKHYGINVQGKHAVVIGRSNIVGRPMSILL 181
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
++ +ATV++ HS+T++ +I R ADI+++A+G P+ V+ W+K G V IDVGIN + DA
Sbjct: 182 EKANATVTLCHSKTESIADIVRTADIVVAAIGIPHFVKADWLKKGVVAIDVGINSIPDAT 241
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
GYRL GD+ +E A EVASAITPVPG VGPMT+AMLL N + SA R
Sbjct: 242 KKSGYRLTGDIDFENAKEVASAITPVPGSVGPMTVAMLLQNVVESAVR 289
|
|
| MGI|MGI:1342005 Mthfd1 "methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 746 (267.7 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 146/292 (50%), Positives = 201/292 (68%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQ 136
A A +++GK V+ QIRD + +V+RM++ + G PGLA++ VGDR DS Y+ K KA +
Sbjct: 2 APAGILNGKLVSAQIRDRLKNQVTRMQEQVPGFTPGLAILQVGDRDDSNLYINVKLKAAE 61
Query: 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSME 194
+GI + + LP ++E EVLK++ N+D SVHG +VQLPL I+ ++++NA++ E
Sbjct: 62 EIGIKATHIKLPRTSTESEVLKYVISLNEDASVHGFIVQLPLDSENSINTEAVINAIAPE 121
Query: 195 KDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPA 254
KDVDG ++ G+LA FIPCTPKGC+EL+ G I G+ AVV+GRS IVG P
Sbjct: 122 KDVDGLTSVSAGKLARGDLNDCFIPCTPKGCLELIKEAGVQIAGRHAVVVGRSKIVGAPM 181
Query: 255 ALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
LL +ATV+ HS+T N ++ + DI++ A GQP MV+G WIKPGAV+ID GIN V
Sbjct: 182 HDLLLWNNATVTTCHSKTANLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYV 241
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
D P G ++VGDV Y+EA E AS ITPVPGGVGPMT+AML+ +T+ SA+R
Sbjct: 242 PDDTKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAQR 293
|
|
| TIGR_CMR|SPO_1559 SPO_1559 "methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 157/291 (53%), Positives = 202/291 (69%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A VIDGKA A +IR ++ V+ +K G+ PGLAV+LVG+ S YVR+K K V
Sbjct: 2 AATVIDGKAFAARIRGQVAEHVAELKAGHGITPGLAVVLVGEDPASQVYVRSKGKQTVEV 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G+NS+E L DTSE ++L I N DP VHGILVQLPLP H+DE ++NA+ KDVD
Sbjct: 62 GMNSYEHKLDADTSEADLLALIDRLNGDPDVHGILVQLPLPGHLDEDLVINAIDPAKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFH N+G L G++ + +PCTP GC+ +L + + G AVVIGRSNIVG P A LL
Sbjct: 122 GFHISNVGLLGT-GQKSM-VPCTPLGCLMMLRDHHGSLSGMDAVVIGRSNIVGKPMAQLL 179
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE-DA 317
+ TV+I HSRTK+ ++ R+ADI+++AVG+P MV G WIKPGA +IDVGIN +E D
Sbjct: 180 LGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMVPGDWIKPGATVIDVGINRIERDG 239
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
K+ RLVGDV Y+ +VA AITPVPGGVGPMTIA LL+NTLT+ R +
Sbjct: 240 KT----RLVGDVHYDSCAQVAGAITPVPGGVGPMTIACLLANTLTACTRAN 286
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| B3ECA6 | FOLD_CHLL2 | 3, ., 5, ., 4, ., 9 | 0.5238 | 0.7816 | 0.9797 | yes | no |
| Q71ZW2 | FOLD_LISMF | 3, ., 5, ., 4, ., 9 | 0.5085 | 0.7601 | 0.9929 | yes | no |
| A6UB98 | FOLD2_SINMW | 3, ., 5, ., 4, ., 9 | 0.5392 | 0.7654 | 0.9562 | yes | no |
| C0ZC05 | FOLD_BREBN | 3, ., 5, ., 4, ., 9 | 0.5277 | 0.7520 | 0.9823 | yes | no |
| A4SER8 | FOLD_PROVI | 3, ., 5, ., 4, ., 9 | 0.5221 | 0.7789 | 0.9796 | yes | no |
| B7KEP3 | FOLD_CYAP7 | 3, ., 5, ., 4, ., 9 | 0.5221 | 0.7762 | 0.9568 | yes | no |
| A1AL91 | FOLD_PELPD | 3, ., 5, ., 4, ., 9 | 0.5470 | 0.7493 | 0.9823 | yes | no |
| B8DFW8 | FOLD_LISMH | 3, ., 5, ., 4, ., 9 | 0.5051 | 0.7601 | 0.9929 | yes | no |
| A2RLU5 | FOLD_LACLM | 3, ., 5, ., 4, ., 9 | 0.5347 | 0.7520 | 0.9789 | yes | no |
| Q1GE28 | FOLD_RUEST | 3, ., 5, ., 4, ., 9 | 0.5290 | 0.7816 | 0.9666 | yes | no |
| A5GAM5 | FOLD_GEOUR | 3, ., 5, ., 4, ., 9 | 0.5505 | 0.7493 | 0.9928 | yes | no |
| C1L2R6 | FOLD_LISMC | 3, ., 5, ., 4, ., 9 | 0.5085 | 0.7601 | 0.9929 | yes | no |
| Q8Y7C5 | FOLD_LISMO | 3, ., 5, ., 4, ., 9 | 0.5087 | 0.7493 | 0.9788 | yes | no |
| Q92BZ4 | FOLD_LISIN | 3, ., 5, ., 4, ., 9 | 0.5191 | 0.7493 | 0.9788 | yes | no |
| A7HSV9 | FOLD_PARL1 | 3, ., 5, ., 4, ., 9 | 0.5328 | 0.7708 | 0.9597 | yes | no |
| B4S820 | FOLD_PROA2 | 3, ., 5, ., 4, ., 9 | 0.5187 | 0.7789 | 0.9796 | yes | no |
| B9M769 | FOLD_GEOSF | 3, ., 5, ., 4, ., 9 | 0.5540 | 0.7493 | 0.9928 | yes | no |
| A3DEE6 | FOLD_CLOTH | 3, ., 5, ., 4, ., 9 | 0.5400 | 0.7493 | 0.9754 | yes | no |
| Q31Q60 | FOLD_SYNE7 | 3, ., 5, ., 4, ., 9 | 0.5486 | 0.7547 | 0.9688 | yes | no |
| A1B5A7 | FOLD1_PARDP | 3, ., 5, ., 4, ., 9 | 0.5257 | 0.7708 | 0.9597 | yes | no |
| Q5N421 | FOLD_SYNP6 | 3, ., 5, ., 4, ., 9 | 0.5486 | 0.7547 | 0.9688 | yes | no |
| B2A532 | FOLD_NATTJ | 3, ., 5, ., 4, ., 9 | 0.5392 | 0.7628 | 0.9964 | yes | no |
| Q39WH4 | FOLD2_GEOMG | 3, ., 5, ., 4, ., 9 | 0.5298 | 0.7439 | 0.9684 | yes | no |
| B4RE11 | FOLD_PHEZH | 3, ., 5, ., 4, ., 9 | 0.5084 | 0.7843 | 0.9797 | yes | no |
| Q5LNV2 | FOLD1_RUEPO | 3, ., 5, ., 4, ., 9 | 0.5324 | 0.7708 | 0.9662 | yes | no |
| A1BBS1 | FOLD2_PARDP | 3, ., 5, ., 4, ., 9 | 0.5185 | 0.7870 | 0.9668 | yes | no |
| Q5NP22 | FOLD_ZYMMO | 3, ., 5, ., 4, ., 9 | 0.5410 | 0.7708 | 0.9629 | yes | no |
| Q2G338 | FOLD_NOVAD | 3, ., 5, ., 4, ., 9 | 0.5486 | 0.7681 | 0.9595 | yes | no |
| Q9K966 | FOLD_BACHD | 3, ., 5, ., 4, ., 9 | 0.5347 | 0.7493 | 0.9964 | yes | no |
| Q3ASI0 | FOLD_CHLCH | 3, ., 5, ., 4, ., 9 | 0.5290 | 0.7789 | 0.9796 | yes | no |
| B3EJG9 | FOLD_CHLPB | 3, ., 5, ., 4, ., 9 | 0.5442 | 0.7816 | 0.9731 | yes | no |
| B3QUL4 | FOLD_CHLT3 | 3, ., 5, ., 4, ., 9 | 0.5139 | 0.7601 | 0.9591 | yes | no |
| Q030A3 | FOLD_LACLS | 3, ., 5, ., 4, ., 9 | 0.5347 | 0.7520 | 0.9789 | yes | no |
| A8I5P5 | FOLD_AZOC5 | 3, ., 5, ., 4, ., 9 | 0.5625 | 0.7547 | 0.9655 | yes | no |
| A5EX57 | FOLD_DICNV | 3, ., 5, ., 4, ., 9 | 0.5376 | 0.7708 | 0.9828 | yes | no |
| A0LE04 | FOLD_MAGSM | 3, ., 5, ., 4, ., 9 | 0.5841 | 0.7628 | 0.9929 | yes | no |
| Q2N7E3 | FOLD_ERYLH | 3, ., 5, ., 4, ., 9 | 0.5482 | 0.7654 | 0.9530 | yes | no |
| B4SGR4 | FOLD_PELPB | 3, ., 5, ., 4, ., 9 | 0.5187 | 0.7789 | 0.9796 | yes | no |
| Q73RS2 | FOLD_TREDE | 3, ., 5, ., 4, ., 9 | 0.5152 | 0.7816 | 0.9897 | yes | no |
| B2UM17 | FOLD_AKKM8 | 3, ., 5, ., 4, ., 9 | 0.5104 | 0.7654 | 0.9759 | yes | no |
| Q2RIB4 | FOLD_MOOTA | 3, ., 5, ., 4, ., 9 | 0.5625 | 0.7466 | 0.9892 | yes | no |
| A1BF67 | FOLD_CHLPD | 3, ., 5, ., 4, ., 9 | 0.5102 | 0.7816 | 0.9830 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT4G00620 | tetrahydrofolate dehydrogenase/cyclohydrolase, putative; tetrahydrofolate dehydrogenase/cyclohydrolase, putative; FUNCTIONS IN- binding, catalytic activity; INVOLVED IN- folic acid and derivative biosynthetic process, metabolic process; LOCATED IN- chloroplast; CONTAINS InterPro DOMAIN/s- Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro-IPR000672), NAD(P)-binding (InterPro-IPR016040); BEST Arabidopsis thaliana protein match is- tetrahydrofolate dehydrogenase/cyclohydrolase, putative (TAIR-AT4G00600.1); Has 7121 Blast hits to 7116 proteins in 1557 species- Archae - 77; Bacteria - [...] (360 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| THFS | THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE); ATP binding / copper ion binding / formate-tetrahy [...] (634 aa) | • | • | • | • | 0.943 | |||||
| AT5G47435 | formyltetrahydrofolate deformylase, putative; encodes one of the two putative formyltetrahydrof [...] (323 aa) | • | • | • | 0.840 | ||||||
| AT4G17360 | formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase/ methyltran [...] (328 aa) | • | • | • | 0.831 | ||||||
| AT2G35040 | AICARFT/IMPCHase bienzyme family protein; AICARFT/IMPCHase bienzyme family protein; FUNCTIONS I [...] (596 aa) | • | • | • | • | 0.693 | |||||
| PUR3 | phosphoribosylglycinamide formyltransferase; N10-formyltetrahydrofolate-dependent phosphoribosy [...] (292 aa) | • | • | • | 0.655 | ||||||
| PUR2 | phosphoribosylamine--glycine ligase (PUR2); glycinamide ribonucleotide synthetase (GAR syntheta [...] (532 aa) | • | • | • | 0.621 | ||||||
| GDCST | aminomethyltransferase, putative; aminomethyltransferase, putative; FUNCTIONS IN- aminomethyltr [...] (408 aa) | • | • | • | 0.616 | ||||||
| AtGLDP2 | AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2); ATP binding / glycine dehydro [...] (1044 aa) | • | • | • | 0.604 | ||||||
| MTHFR1 | MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1); methylenetetrahydrofolate reductase (NADPH); me [...] (592 aa) | • | • | 0.575 | |||||||
| pde194 | pde194 (pigment defective 194); catalytic/ formyltetrahydrofolate deformylase/ hydroxymethyl-, [...] (355 aa) | • | • | 0.568 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 371 | |||
| PLN02616 | 364 | PLN02616, PLN02616, tetrahydrofolate dehydrogenase | 0.0 | |
| PLN02897 | 345 | PLN02897, PLN02897, tetrahydrofolate dehydrogenase | 1e-162 | |
| PLN02516 | 299 | PLN02516, PLN02516, methylenetetrahydrofolate dehy | 1e-152 | |
| COG0190 | 283 | COG0190, FolD, 5,10-methylene-tetrahydrofolate deh | 1e-148 | |
| PRK14190 | 284 | PRK14190, PRK14190, bifunctional 5,10-methylene-te | 1e-139 | |
| PRK14188 | 296 | PRK14188, PRK14188, bifunctional 5,10-methylene-te | 1e-138 | |
| PRK10792 | 285 | PRK10792, PRK10792, bifunctional 5,10-methylene-te | 1e-130 | |
| PRK14189 | 285 | PRK14189, PRK14189, bifunctional 5,10-methylene-te | 1e-123 | |
| PRK14186 | 297 | PRK14186, PRK14186, bifunctional 5,10-methylene-te | 1e-123 | |
| PRK14174 | 295 | PRK14174, PRK14174, bifunctional 5,10-methylene-te | 1e-121 | |
| PRK14179 | 284 | PRK14179, PRK14179, bifunctional 5,10-methylene-te | 1e-120 | |
| PRK14191 | 285 | PRK14191, PRK14191, bifunctional 5,10-methylene-te | 1e-116 | |
| PRK14167 | 297 | PRK14167, PRK14167, bifunctional 5,10-methylene-te | 1e-108 | |
| PRK14194 | 301 | PRK14194, PRK14194, bifunctional 5,10-methylene-te | 1e-107 | |
| PRK14184 | 286 | PRK14184, PRK14184, bifunctional 5,10-methylene-te | 1e-107 | |
| PRK14183 | 281 | PRK14183, PRK14183, bifunctional 5,10-methylene-te | 1e-105 | |
| PRK14168 | 297 | PRK14168, PRK14168, bifunctional 5,10-methylene-te | 1e-104 | |
| PRK14187 | 294 | PRK14187, PRK14187, bifunctional 5,10-methylene-te | 1e-104 | |
| PRK14175 | 286 | PRK14175, PRK14175, bifunctional 5,10-methylene-te | 1e-104 | |
| PRK14185 | 293 | PRK14185, PRK14185, bifunctional 5,10-methylene-te | 1e-103 | |
| PRK14176 | 287 | PRK14176, PRK14176, bifunctional 5,10-methylene-te | 1e-103 | |
| PRK14193 | 284 | PRK14193, PRK14193, bifunctional 5,10-methylene-te | 1e-102 | |
| PRK14170 | 284 | PRK14170, PRK14170, bifunctional 5,10-methylene-te | 3e-98 | |
| cd01080 | 168 | cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding | 1e-96 | |
| PRK14178 | 279 | PRK14178, PRK14178, bifunctional 5,10-methylene-te | 1e-96 | |
| PRK14192 | 283 | PRK14192, PRK14192, bifunctional 5,10-methylene-te | 3e-96 | |
| PRK14166 | 282 | PRK14166, PRK14166, bifunctional 5,10-methylene-te | 6e-96 | |
| pfam02882 | 160 | pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydro | 2e-95 | |
| PRK14173 | 287 | PRK14173, PRK14173, bifunctional 5,10-methylene-te | 7e-95 | |
| PRK14172 | 278 | PRK14172, PRK14172, bifunctional 5,10-methylene-te | 9e-95 | |
| PRK14182 | 282 | PRK14182, PRK14182, bifunctional 5,10-methylene-te | 2e-91 | |
| PRK14169 | 282 | PRK14169, PRK14169, bifunctional 5,10-methylene-te | 2e-91 | |
| PRK14180 | 282 | PRK14180, PRK14180, bifunctional 5,10-methylene-te | 6e-88 | |
| PRK14181 | 287 | PRK14181, PRK14181, bifunctional 5,10-methylene-te | 5e-87 | |
| PRK14171 | 288 | PRK14171, PRK14171, bifunctional 5,10-methylene-te | 4e-84 | |
| PRK14177 | 284 | PRK14177, PRK14177, bifunctional 5,10-methylene-te | 5e-83 | |
| pfam00763 | 117 | pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydroge | 2e-54 | |
| cd05212 | 140 | cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) b | 3e-34 | |
| cd01079 | 197 | cd01079, NAD_bind_m-THF_DH, NAD binding domain of | 6e-17 | |
| cd05191 | 86 | cd05191, NAD_bind_amino_acid_DH, NAD(P) binding do | 4e-06 | |
| smart01002 | 149 | smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT | 0.002 | |
| cd05305 | 359 | cd05305, L-AlaDH, Alanine dehydrogenase NAD-bindin | 0.004 |
| >gnl|CDD|215332 PLN02616, PLN02616, tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Score = 618 bits (1596), Expect = 0.0
Identities = 297/368 (80%), Positives = 321/368 (87%), Gaps = 4/368 (1%)
Query: 4 SRSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSP 63
S++F DCSSSTT+RL+ F R G L RR VG + ++SS
Sbjct: 1 MASLMFTDCSSSTTSRLIHFNRISTPFNGTFLL--RRC-VGPLRVRTTASGRGCCINSSS 57
Query: 64 SPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKD 123
SPS PV+NA SE AKVIDGKAVAK+IRDEIT EVSRMK++IGVVPGLAVILVGDRKD
Sbjct: 58 SPS-PVINADTGSEGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKD 116
Query: 124 SATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHID 183
SATYVRNKKKAC SVGINSFEV LPED++EQEVLK IS FN+DPSVHGILVQLPLP H+D
Sbjct: 117 SATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMD 176
Query: 184 EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVV 243
EQ+ILNAVS+EKDVDGFHPLNIGRLAMRGREPLF+PCTPKGCIELLHRY +IKGKRAVV
Sbjct: 177 EQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVV 236
Query: 244 IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPG 303
IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR+ADIIISAVGQPNMVRGSWIKPG
Sbjct: 237 IGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPG 296
Query: 304 AVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTS 363
AV+IDVGINPVEDA SPRGYRLVGDVCYEEAC+VASA+TPVPGGVGPMTIAMLLSNTLTS
Sbjct: 297 AVVIDVGINPVEDASSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTS 356
Query: 364 AKRVHNFQ 371
AKR+HNFQ
Sbjct: 357 AKRIHNFQ 364
|
Length = 364 |
| >gnl|CDD|178485 PLN02897, PLN02897, tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Score = 457 bits (1178), Expect = e-162
Identities = 200/312 (64%), Positives = 238/312 (76%), Gaps = 5/312 (1%)
Query: 58 TVHSSPSPSLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVIL 117
+S P P + E VIDG +A++IR +I EV +MK A+G VPGLAV+L
Sbjct: 39 IPYSDPPPPVSFET-----EQKTVVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVL 93
Query: 118 VGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLP 177
VG ++DS TYVRNK KAC+ GI S LPED +E ++L + FN+D S+HGILVQLP
Sbjct: 94 VGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLP 153
Query: 178 LPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237
LP H+DE ILN V +EKDVDGFHPLN+G LAMRGREPLF+ CTPKGC+ELL R G +I
Sbjct: 154 LPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIA 213
Query: 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRG 297
GK AVVIGRSNIVG+P +LLLQR DATVS VH+ TK+PE+ITR+ADI+I+A G PN+VRG
Sbjct: 214 GKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRG 273
Query: 298 SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLL 357
SW+KPGAV+IDVG PVED+ GYRLVGDVCYEEA VASAITPVPGGVGPMTI MLL
Sbjct: 274 SWLKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLL 333
Query: 358 SNTLTSAKRVHN 369
NTL +AKR+
Sbjct: 334 CNTLDAAKRIFL 345
|
Length = 345 |
| >gnl|CDD|178131 PLN02516, PLN02516, methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Score = 430 bits (1106), Expect = e-152
Identities = 187/292 (64%), Positives = 230/292 (78%)
Query: 76 SEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKAC 135
S+ A++IDGKA+AK IR EI EV+++ + G VPGLAV++VG RKDS TYV K+KAC
Sbjct: 5 SDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKAC 64
Query: 136 QSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEK 195
VGI SF+V LPE+ SE E++ + N +P VHGILVQLPLP HI+E+ ILN +S+EK
Sbjct: 65 AEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEK 124
Query: 196 DVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA 255
DVDGFHPLNIG+LAM+GREPLF+PCTPKGC+ELL R G IKGK+AVV+GRSNIVG+P +
Sbjct: 125 DVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVS 184
Query: 256 LLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 315
LLL + DATV++VHSRT +PE I R+ADI+I+A GQ M++G WIKPGA +IDVG N V
Sbjct: 185 LLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVS 244
Query: 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367
D GYRLVGDV + E +VA ITPVPGGVGPMT+AMLL NT+ AKRV
Sbjct: 245 DPSKKSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRV 296
|
Length = 299 |
| >gnl|CDD|223268 COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 418 bits (1077), Expect = e-148
Identities = 162/289 (56%), Positives = 205/289 (70%), Gaps = 8/289 (2%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
+IDGKA+A++IR+E+ +V +K G PGLAVILVGD S YVR+KKKA + +GI
Sbjct: 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGI 60
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
S LPED +E+E+L I N DP V GILVQLPLP H+DEQ +L A+ EKDVDGF
Sbjct: 61 ASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGF 120
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
HP N+G+LA EP F+PCTP G + LL YG D++GK VV+GRSNIVG P ALLL
Sbjct: 121 HPYNLGKLA--QGEPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLN 178
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
+ATV++ HSRTK+ IT+ ADI++ AVG+P+ ++ +KPGAV+IDVGIN V D
Sbjct: 179 ANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVND---- 234
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
+LVGDV ++ E ASAITPVPGGVGPMT+AMLL NTL +A+R
Sbjct: 235 --GKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRG 281
|
Length = 283 |
| >gnl|CDD|184560 PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 397 bits (1023), Expect = e-139
Identities = 155/290 (53%), Positives = 202/290 (69%), Gaps = 9/290 (3%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
A +IDGK VAK+ R+++ EV ++K+ G+VPGLAVILVGD S +YVR KKKA + V
Sbjct: 2 MAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKV 60
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI S P D +E+E+L I N DP ++GILVQLPLP HIDE++++ +S EKDVD
Sbjct: 61 GIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVD 120
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP+N+GR+ + + F+PCTP G +ELL Y DI GK VV+GRSNIVG P LL
Sbjct: 121 GFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLL 178
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
E+ATV+ HS+TKN E+T+QADI+I AVG+P ++ +K GAV+IDVG+N +E+ K
Sbjct: 179 LNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLENGK 238
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
L GDV ++ E AS ITPVPGGVGPMTI ML+ NT+ AKR
Sbjct: 239 ------LCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAG 282
|
Length = 284 |
| >gnl|CDD|184558 PRK14188, PRK14188, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 395 bits (1018), Expect = e-138
Identities = 161/291 (55%), Positives = 204/291 (70%), Gaps = 3/291 (1%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
A +IDGKA A +R + EV+R+K A GV PGLAV+LVG+ S YVR+K K + G
Sbjct: 2 ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAG 61
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
+ SFE LP DTS+ E+L I+ N DP++HGILVQLPLP H+D ++++ A+ EKDVDG
Sbjct: 62 MASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDG 121
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
H +N GRLA E +PCTP GC+ LL R D+ G AVVIGRSN+VG P A LL
Sbjct: 122 LHVVNAGRLA--TGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLL 179
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+ATV+I HSRT++ + R+ADI+++AVG+P MV+G WIKPGA +IDVGIN + +
Sbjct: 180 AANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEK 239
Query: 320 PRG-YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
G RLVGDV + EA EVA AITPVPGGVGPMTIA LL+NTLT+A R
Sbjct: 240 GEGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAAG 290
|
Length = 296 |
| >gnl|CDD|236760 PRK10792, PRK10792, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 373 bits (961), Expect = e-130
Identities = 153/292 (52%), Positives = 190/292 (65%), Gaps = 8/292 (2%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+AK+IDGK +A+Q+R E+ +V A PGLAV+LVG S YV +K+KAC+ V
Sbjct: 2 TAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEV 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G S LPE TSE E+L I N DP++ GILVQLPLP HID +L + +KDVD
Sbjct: 62 GFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP N+GRLA R PL PCTP+G + LL RYG D G AVV+G SNIVG P +L L
Sbjct: 122 GFHPYNVGRLAQ--RIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLEL 179
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
TV++ H TKN R AD+++ AVG+P + G WIKPGA++IDVGIN +ED K
Sbjct: 180 LLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLEDGK 239
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370
LVGDV +E A E AS ITPVPGGVGPMT+A LL NTL + + H+
Sbjct: 240 ------LVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHDP 285
|
Length = 285 |
| >gnl|CDD|184559 PRK14189, PRK14189, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-123
Identities = 149/291 (51%), Positives = 192/291 (65%), Gaps = 9/291 (3%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A++IDG A++KQ+R E + + A G PGLAVILVGD S YVRNK KAC+
Sbjct: 2 TAQLIDGNALSKQLRAEAAQRAAALT-ARGHQPGLAVILVGDNPASQVYVRNKVKACEDN 60
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G +S + P D SE E+L I N DP +HGILVQLPLP HID ++ A++ EKDVD
Sbjct: 61 GFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVD 120
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFH N G L M G +PLF PCTP G +++L G ++G AVVIGRSNIVG P A+LL
Sbjct: 121 GFHVANAGAL-MTG-QPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLL 178
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
+ ATV+I HS+T++ TRQADI+++AVG+ N++ +KPGA +IDVG+N + K
Sbjct: 179 LQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDAGK 238
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
L GDV + EVA ITPVPGGVGPMTI MLL NT+ +A+R
Sbjct: 239 ------LCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283
|
Length = 285 |
| >gnl|CDD|237636 PRK14186, PRK14186, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 357 bits (919), Expect = e-123
Identities = 149/290 (51%), Positives = 196/290 (67%), Gaps = 4/290 (1%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
A ++DGKA+A +I + ++ G PGLAV+ VGD SA YVRNK+KAC VG
Sbjct: 2 ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVG 61
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
I SF HLP DTS+ EV I+ N D V GIL+QLPLP H+DE +L+A+ +KD DG
Sbjct: 62 IASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADG 121
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
HPLN+GRL ++G EP CTP G + LL DI GK+AVV+GRS +VG P AL+L
Sbjct: 122 LHPLNLGRL-VKG-EPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLL 179
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+ATV+I HSRT++ ITR+ADI+++A G+PN++ +KPGAV++DVGI+ + S
Sbjct: 180 AANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLPS--S 237
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
RL GDV +EE VA+AITPVPGGVGPMT+ MLL NT+ S ++ H
Sbjct: 238 DGKTRLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287
|
Length = 297 |
| >gnl|CDD|172662 PRK14174, PRK14174, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-121
Identities = 158/292 (54%), Positives = 200/292 (68%), Gaps = 4/292 (1%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK V+ +++E+ V + G VPGL VI+VG+ S YVRNK K+C+ +G+N
Sbjct: 3 IIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMN 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LP DT+E+ +LK I N+DP VHGILVQ PLP IDE ++ A+ KDVDGFH
Sbjct: 63 STVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA-LLLQR 260
P N+GRL M + F+ CTP G +ELL RY + KGK VV+GRSNIVG P A L+LQ+
Sbjct: 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQK 182
Query: 261 EDA---TVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
TV+I HS TK+ TRQADI+I+A+G+ + +KPGAV+IDVGIN +ED
Sbjct: 183 LKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIEDP 242
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
+ GYRLVGDV YE ASAITPVPGGVGPMTIAMLL NTL S +RV+N
Sbjct: 243 STKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVNN 294
|
Length = 295 |
| >gnl|CDD|237634 PRK14179, PRK14179, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 347 bits (893), Expect = e-120
Identities = 148/287 (51%), Positives = 204/287 (71%), Gaps = 8/287 (2%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
++IDGKA+A++++ E+ +V+++K+ G+VPGL VILVGD S YVRNK+++ + G
Sbjct: 2 TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAG 61
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
S V LPE S++E+L I +N DP+ HGILVQLPLP HI+E+ IL A+ +KDVDG
Sbjct: 62 FKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDG 121
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP+N G L GR P+ IPCTP G +E+ Y +++GK AVVIGRSNIVG P A LL
Sbjct: 122 FHPMNTGHL-WSGR-PVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLL 179
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
++ATV++ HSRT+N E+ R+ADI++ A+G+ + V ++K GAV+IDVG+N E+ K
Sbjct: 180 DKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDENGK- 238
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
L+GDV ++E EVAS ITPVPGGVGPMTI ML+ T +A R
Sbjct: 239 -----LIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALR 280
|
Length = 284 |
| >gnl|CDD|172679 PRK14191, PRK14191, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-116
Identities = 135/285 (47%), Positives = 182/285 (63%), Gaps = 8/285 (2%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
++DGKA++ +I ++ ++ + G P LAVILVG S TYV K KAC+ VG+
Sbjct: 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGM 61
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
+S L E+T+E E+L I N D ++ GILVQLPLP HID + +L A+ KDVDGF
Sbjct: 62 DSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGF 121
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
HPLNIG+L + F+P TP G + LL Y +IKGK V+IG SNIVG P A+L+
Sbjct: 122 HPLNIGKLCS-QLDG-FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLN 179
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
A+VS+ H TK+ T+ ADI+ VG+P++++ S +K GAV++D+GIN + D
Sbjct: 180 AGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLNDG--- 236
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
RLVGDV +E AS ITPVPGGVGPMTI LL NTL +A+
Sbjct: 237 ---RLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAE 278
|
Length = 285 |
| >gnl|CDD|184549 PRK14167, PRK14167, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 317 bits (815), Expect = e-108
Identities = 145/289 (50%), Positives = 193/289 (66%), Gaps = 8/289 (2%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
++IDG AVA QIRD++T + ++DA GV PGLA +L+ D S TYV K++ C+ VG
Sbjct: 2 TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVG 60
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
I + +V + D +E+ I N D VHGILVQ+P+P H+D++ +L + KDVDG
Sbjct: 61 IEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDG 120
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAA-LLL 258
FHP N+GRL + F PCTP G +LL G D +G VV+GRS+IVG P A LL+
Sbjct: 121 FHPENVGRLV--AGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLI 178
Query: 259 QRED---ATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 315
Q+ D ATV++ HSRT + TR+ADI+++A G P ++ GS + GA +IDVGIN V
Sbjct: 179 QKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRV- 237
Query: 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364
DA + +GY LVGDV +E A E ASAITPVPGGVGPMT AMLL NT+ +A
Sbjct: 238 DADTEKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAA 286
|
Length = 297 |
| >gnl|CDD|172682 PRK14194, PRK14194, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 317 bits (813), Expect = e-107
Identities = 153/294 (52%), Positives = 202/294 (68%), Gaps = 6/294 (2%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQS 137
SAK+IDGKA A ++ ++ +V +K A G+ P LAVILVG+ S YVRNK +
Sbjct: 2 MSAKLIDGKAAAARVLAQVREDVRTLK-AAGIEPALAVILVGNDPASQVYVRNKILRAEE 60
Query: 138 VGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDV 197
GI S E LP DTS+ +L I+ N DPSV+GIL+QLPLP HIDE +L A++ KDV
Sbjct: 61 AGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDV 120
Query: 198 DGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALL 257
DGFH N+G L+ +GR+ L PCTP GC+ LL D+ GK AVVIGRSNIVG P A L
Sbjct: 121 DGFHSENVGGLS-QGRDVL-TPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAAL 178
Query: 258 LQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
L + +V++VHSR+ + + + RQADI+++AVG+P ++ W+KPGAV+IDVGIN ++D
Sbjct: 179 LLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRIDDD 238
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
RLVGDV ++ A V SAITPVPGGVGPMTIA L+ NT+T+A+ + Q
Sbjct: 239 GRS---RLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAHAQ 289
|
Length = 301 |
| >gnl|CDD|237635 PRK14184, PRK14184, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-107
Identities = 146/288 (50%), Positives = 186/288 (64%), Gaps = 13/288 (4%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
++DGKA A IR+E+ EV+ + G PGLAVILVG+ S YVRNK++AC+ GI
Sbjct: 3 LLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIV 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S LP DT+++E+ I+ N P + GIL+QLPLP +D Q L + KDVDGFH
Sbjct: 63 SEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
P N+GRLA+ P F PCTP G + LL RYG GK+AVV+GRSNIVG P AL+L
Sbjct: 123 PENMGRLAL--GLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAP 180
Query: 262 ----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
+ATV++ HSRT + E R+AD + A+G+P V +KPGAV++DVGIN +D
Sbjct: 181 GKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDDG 240
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
LVGD +E +VASAITPVPGGVGPMTIA LL NT+ S K
Sbjct: 241 -------LVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWK 281
|
Length = 286 |
| >gnl|CDD|184555 PRK14183, PRK14183, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = e-105
Identities = 148/285 (51%), Positives = 196/285 (68%), Gaps = 8/285 (2%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
+++DGKA++ +I++ + EV +K +VPGLAVILVGD S TYV+ K KAC VGI
Sbjct: 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGI 61
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
S +P S++E+L+ I++ N++P++ GILVQLPLP HID IL A+ +KDVDGF
Sbjct: 62 YSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGF 121
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
HP N+GRL + G + F+PCTP G +ELL Y D+KGK V+G SNIVG P A LL
Sbjct: 122 HPYNVGRL-VTGLDG-FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLN 179
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
+ATV I H TK+ + T++ADI+I VG+PN++ +K GA++ID+GIN ED
Sbjct: 180 ANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTEDG--- 236
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
RLVGDV +E + S ITPVPGGVGPMTIAMLLSNTL +AK
Sbjct: 237 ---RLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAK 278
|
Length = 281 |
| >gnl|CDD|237633 PRK14168, PRK14168, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 308 bits (790), Expect = e-104
Identities = 146/291 (50%), Positives = 198/291 (68%), Gaps = 4/291 (1%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
SAK+I G + ++I +EI GEV+ +K+ G VPGL ILVG+ S +YV K K +
Sbjct: 2 SAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRL 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G + + + D +E+E+L I +N+D S+HGILVQLPLP HI+E+ +LNA+ +KDVD
Sbjct: 62 GFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP+N+GRL + G E F+PCTP G E+L R G + G VV+GRSNIVG P A ++
Sbjct: 122 GFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMM 181
Query: 259 QRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
++ +ATV+IVH+R+KN ++ADI+I A G PN+V+ WIKPGA +IDVG+N V
Sbjct: 182 TQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRV 241
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
+S L GDV ++ E+A ITPVPGGVGPMTIAML+ NTL SAK
Sbjct: 242 GTNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAK 292
|
Length = 297 |
| >gnl|CDD|172675 PRK14187, PRK14187, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-104
Identities = 140/292 (47%), Positives = 191/292 (65%), Gaps = 6/292 (2%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK +A I + + + +K + P L VILVGD S YVRNK++ + +G+
Sbjct: 4 IIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLR 63
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LP SE +++ I+ N+D SVHGILVQLP+P HID+ I+N + EKDVDGFH
Sbjct: 64 SETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFH 123
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
N+GRL ++ IPCTPKGC+ L+ ++ G AVVIGRSNIVG P A LL E
Sbjct: 124 NENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGE 183
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
+ TV+ VHS T++ + +ADI+++AVG PN V+ SWIK GA++IDVGIN +E+
Sbjct: 184 NCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEEGGVK- 242
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA---KRVHNF 370
+ VGDV + E + ASAITPVPGGVGPMTIA L+ NT+ +A K + +F
Sbjct: 243 --KFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQKGIDDF 292
|
Length = 294 |
| >gnl|CDD|184552 PRK14175, PRK14175, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 307 bits (787), Expect = e-104
Identities = 145/287 (50%), Positives = 198/287 (68%), Gaps = 9/287 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
AK++DGK +AK R + +V +K G P L+VILVG+ S +YVR+KKKA + +G
Sbjct: 3 AKILDGKQIAKDYRQGLQDQVEALK-EKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIG 61
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
+ S VHL E +E+EVL ++ N+D SV GILVQ+PLP + EQ IL A++ EKDVDG
Sbjct: 62 MISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDG 121
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP+NIG+L + E F+PCTP G +E+L D++GK AVVIGRS+IVG P + LL
Sbjct: 122 FHPINIGKLYI--DEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLL 179
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+++A+V+I+HSR+K+ + AD+I+SAVG+P +V +K GAVIIDVG P E+ K
Sbjct: 180 QKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDENGK- 238
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
L GDV Y+ E+A AITPVPGGVGP+TI M+L+NTL + K
Sbjct: 239 -----LKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKM 280
|
Length = 286 |
| >gnl|CDD|184556 PRK14185, PRK14185, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 307 bits (787), Expect = e-103
Identities = 139/291 (47%), Positives = 187/291 (64%), Gaps = 6/291 (2%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
++IDGKA++ QI+ EI EV+ + G P LA ILVG S TYV NK KAC+ G
Sbjct: 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGF 61
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
S + D +E+E+L + N D V G +VQLPLP HI EQ ++ A+ KDVDGF
Sbjct: 62 KSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMP-AALLLQ 259
HP+N+GR+++ P F+ TP G +ELL RY + GK+ VV+GRSNIVG P A L++Q
Sbjct: 122 HPINVGRMSI--GLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQ 179
Query: 260 RE---DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316
+ D TV++ HSR+KN ++ +ADIII+A+GQP V+ +K GAV+IDVG V D
Sbjct: 180 KAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVPD 239
Query: 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367
A G++L GDV ++E S ITPVPGGVGPMTI L+ NTL + K+
Sbjct: 240 ATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKA 290
|
Length = 293 |
| >gnl|CDD|184553 PRK14176, PRK14176, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 305 bits (784), Expect = e-103
Identities = 138/293 (47%), Positives = 187/293 (63%), Gaps = 9/293 (3%)
Query: 74 MASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKK 133
M +++IDGKA+AK+I E+ V R+K G+ PGLA ILVGD S YVR K K
Sbjct: 2 MDESYESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHK 61
Query: 134 ACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM 193
AC+ VGI + + LP DT+++E+L+ I N VHGIL+QLPLP H+D Q + A+
Sbjct: 62 ACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDP 121
Query: 194 EKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMP 253
KD DGFHP N+G+L M G E +PCTP G I L YG DI+GK AV++G SN+VG P
Sbjct: 122 AKDADGFHPYNMGKL-MIGDEG-LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKP 179
Query: 254 AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP 313
A +L +ATVS+ H T + ++ T ADI++ A G ++++ +K GAVI DVGI
Sbjct: 180 MAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITK 239
Query: 314 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
ED ++ GDV +E + AS ITPVPGGVGP+TIAML+ + L A++
Sbjct: 240 EED-------KVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEK 285
|
Length = 287 |
| >gnl|CDD|237637 PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 303 bits (778), Expect = e-102
Identities = 127/293 (43%), Positives = 180/293 (61%), Gaps = 12/293 (4%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A ++DGKA A +I+ ++ V+ +K+ G+ PGL +LVGD S YVR K + C V
Sbjct: 2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEV 60
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI S LP D +++E+ I N DP+ G +VQLPLP H+DE ++L + KD D
Sbjct: 61 GITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDAD 120
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
G HP N+GRL + PL PCTP+G + LL RY ++ G VVIGR VG P LLL
Sbjct: 121 GLHPTNLGRLVLNEPAPL--PCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLL 178
Query: 259 QR--EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316
R E+ATV++ H+ T++ TR+ADII++A G ++V +KPGA ++DVG++ D
Sbjct: 179 TRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAGD 238
Query: 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
+LVGDV + + EVA A++P PGGVGPMT A LL+N + A+R
Sbjct: 239 ------GKLVGDV-HPDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG 284
|
Length = 284 |
| >gnl|CDD|172658 PRK14170, PRK14170, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 293 bits (750), Expect = 3e-98
Identities = 147/288 (51%), Positives = 208/288 (72%), Gaps = 9/288 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
++IDGK +AK+I++++T EV+ + G PGLAV+LVGD + S TYVRNK+K + G
Sbjct: 2 GEIIDGKKLAKEIQEKVTREVAELVK-EGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAG 60
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
+ S + LPE+ +E+++L + N+D ++HGILVQLPLP HI E+ +++ +S +KDVDG
Sbjct: 61 MKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDG 120
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP+N+G L + G++ F+PCTP G IEL+ G I+GKRAVVIGRSNIVG P A LL
Sbjct: 121 FHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLL 178
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
E+ATV+I HSRTK+ ++ ++ADI++ A G V+ +IKPGA++IDVG++ E+ K
Sbjct: 179 NENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENNK- 237
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367
L GDV +++ E A ITPVPGGVGPMTI MLL+NTL +AKR+
Sbjct: 238 -----LCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280
|
Length = 284 |
| >gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Score = 284 bits (729), Expect = 1e-96
Identities = 108/172 (62%), Positives = 133/172 (77%), Gaps = 5/172 (2%)
Query: 194 EKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMP 253
EKDVDG HP+N+GRLA+ P FIPCTP G +ELL RYG D+ GK+ VV+GRSNIVG P
Sbjct: 2 EKDVDGLHPVNLGRLALGR--PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKP 59
Query: 254 AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP 313
A LL +ATV++ HS+TKN +E T+QADI+I AVG+P +V+G +KPGAV+IDVGIN
Sbjct: 60 LAALLLNRNATVTVCHSKTKNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119
Query: 314 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
V D G +LVGDV +E A E ASAITPVPGGVGPMT+AML+ NT+ +AK
Sbjct: 120 VPD---KSGGKLVGDVDFESAKEKASAITPVPGGVGPMTVAMLMKNTVEAAK 168
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well as bifunctional m-THF m-THF DHm-THF DHDH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains the bifunctional DH/cyclohydrolase. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. Length = 168 |
| >gnl|CDD|172666 PRK14178, PRK14178, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 1e-96
Identities = 140/284 (49%), Positives = 185/284 (65%), Gaps = 13/284 (4%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
++DGKAV+++ + + E+ G+ P LA ++VGD S YVR K +AC+ VGI
Sbjct: 2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIG 57
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LP D + + VL+ I N+DP ++GILVQLPLP +D + ++ A+ EKDVDGFH
Sbjct: 58 SVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH 117
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
PLN+GRL + G P F PCTP G + LLH Y I GKRAVV+GRS VG P A LL
Sbjct: 118 PLNLGRL-VSGL-PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNA 175
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
DATV+I HS+T+N + RQADI++SA G+ + +KPGA +IDVGIN V
Sbjct: 176 DATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVNG----- 230
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
+L GDV ++ E+A AITPVPGGVGPMTIA L+ NT +AK
Sbjct: 231 --KLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAK 272
|
Length = 279 |
| >gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 287 bits (737), Expect = 3e-96
Identities = 135/289 (46%), Positives = 190/289 (65%), Gaps = 9/289 (3%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQS 137
A V+DGKA+AKQI +E++ V +K G P LA ILVGD SATYVR K AC+
Sbjct: 1 MMALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRR 60
Query: 138 VGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDV 197
VG++S +V LP++T+ +++L I N +P VHGIL+Q P+P IDE++ +A+S+ KDV
Sbjct: 61 VGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDV 120
Query: 198 DGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALL 257
DG L GR+AM E + TP G + LL Y ++ GK AVV+GRS I+G P A++
Sbjct: 121 DGVTCLGFGRMAM--GEAAYGSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMM 178
Query: 258 LQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
L +ATV+I HSRT+N E+ +QADII+ AVG+P +++ WIK GAV++D G +P +
Sbjct: 179 LLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDGG 238
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
VGD+ + E+ASA TPVPGGVGPMTI L+ T+ +A++
Sbjct: 239 G-------VGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEK 280
|
Length = 283 |
| >gnl|CDD|172654 PRK14166, PRK14166, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 286 bits (734), Expect = 6e-96
Identities = 145/284 (51%), Positives = 193/284 (67%), Gaps = 8/284 (2%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
++DGKA++ +I++E+ + +K G+ LAVILVGD S TYV++K KAC+ GI
Sbjct: 3 LLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIK 61
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S HL E+T++ E+L I+ N D SVHGILVQLPLP HI + IL ++ KDVDGFH
Sbjct: 62 SLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH 121
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
P+N+G L + G E F+PCTP G ++LL Y D++GK AV+IG SNIVG P A +L
Sbjct: 122 PINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA 180
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
ATVS+ H +TK+ TRQAD+II A G N++R +K G +++DVGIN +E K
Sbjct: 181 GATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESGK--- 237
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
+VGDV +EE + +S ITPVPGGVGPMTIAMLL NT+ SAK
Sbjct: 238 ---IVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAK 278
|
Length = 282 |
| >gnl|CDD|217267 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain | Back alignment and domain information |
|---|
Score = 280 bits (720), Expect = 2e-95
Identities = 101/166 (60%), Positives = 127/166 (76%), Gaps = 8/166 (4%)
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
HP+N+GRL + EP F+PCTP+G +ELL RYG D+ GK VVIGRSNIVG P ALLL
Sbjct: 1 HPINLGRLVLG--EPGFVPCTPRGIMELLKRYGIDLAGKNVVVIGRSNIVGKPLALLLLN 58
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
+ATV++ HS+TK+ EITR+ADI++ AVG+P +++ W+KPGAV+IDVGIN VE
Sbjct: 59 ANATVTVCHSKTKDLAEITREADIVVVAVGKPGLIKADWVKPGAVVIDVGINRVE----- 113
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
+LVGDV +E E ASAITPVPGGVGPMT+AMLL NT+ +AKR
Sbjct: 114 -NGKLVGDVDFENVKEKASAITPVPGGVGPMTVAMLLQNTVEAAKR 158
|
Length = 160 |
| >gnl|CDD|184551 PRK14173, PRK14173, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 7e-95
Identities = 138/288 (47%), Positives = 193/288 (67%), Gaps = 9/288 (3%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A+ + G A+ + E+ ++++ VP L V+ +G+ S +YVR K + +++
Sbjct: 2 AARELSGPPAAEAVYAELRARLAKLPF----VPHLRVVRLGEDPASVSYVRLKDRQAKAL 57
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G+ S LPE TS++E+L+ I+ N DP V GILVQLPLP HID Q +L A+ KDVD
Sbjct: 58 GLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVD 117
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHPLN+GRL M G E L PCTP G + LL YG + GK VV+GRSNIVG P A LL
Sbjct: 118 GFHPLNVGRLWM-GGEALE-PCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALL 175
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
REDATV++ HS+T++ +TR+AD+++ AVG+P+++ ++PGAV++DVGIN V
Sbjct: 176 LREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVGGNG 235
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
L GDV + E EVA A+TPVPGGVGPMT+AML++NT+ +A R
Sbjct: 236 GRD--ILTGDV-HPEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALR 280
|
Length = 287 |
| >gnl|CDD|172660 PRK14172, PRK14172, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 9e-95
Identities = 116/279 (41%), Positives = 177/279 (63%), Gaps = 9/279 (3%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
++I+GK VA +I++EI V K+ +P +A ILVG+ S Y+ N++K S+GI
Sbjct: 3 QIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGI 62
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
+ ++ L E SE++++ I N D +VHGI++QLPLP H+DE+ I N + KD+D
Sbjct: 63 DFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCL 122
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
+++G+ E F+PCTP I L+ DI+GK VVIGRSNIVG P A LL
Sbjct: 123 TFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLN 180
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
E+ATV+I HS+TKN +E+ ++ADI++ A+G+P + ++K GA++IDVG + V
Sbjct: 181 ENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVNG---- 236
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSN 359
++ GDV +++ + AS ITPVPGGVG +T +L+ N
Sbjct: 237 ---KITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKN 272
|
Length = 278 |
| >gnl|CDD|172670 PRK14182, PRK14182, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 2e-91
Identities = 147/285 (51%), Positives = 196/285 (68%), Gaps = 8/285 (2%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK +A +++ E+ EV + A GV GL V+ VGD SA YVR K+K C+ VGI
Sbjct: 3 LIDGKQIAAKVKGEVATEVRALA-ARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGIT 61
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S E HLP T++ E+L I+ N DP+VHGILVQLPLP H+DE+++L+A+S KD DGFH
Sbjct: 62 SVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFH 121
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
P N+G L++ G + PCTP G + +L D KGKRA+V+GRSNIVG P A++L
Sbjct: 122 PFNVGALSI-GIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER 180
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
ATV+I HSRT + +ADI+++A+G+ +V+G+W+K GAV+IDVG+N + D
Sbjct: 181 HATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLADG---- 236
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
+LVGDV + A ASAITPVPGGVGPMT AMLL NT+ AKR
Sbjct: 237 --KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKR 279
|
Length = 282 |
| >gnl|CDD|184550 PRK14169, PRK14169, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 2e-91
Identities = 134/287 (46%), Positives = 191/287 (66%), Gaps = 9/287 (3%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVG 139
A +DG+AV+K+I ++ V+++ V P LAV+LVG S YVRNK++ + +G
Sbjct: 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIG 59
Query: 140 INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199
+ S LPE T++ ++L ++ N DP V ILVQLPLP +DEQ++++A+ +KDVDG
Sbjct: 60 VRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDG 119
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
F P+++GRL EP + TP G + LL Y D+ GKR V++GRSNIVG P A L+
Sbjct: 120 FSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMV 177
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
DATV+I HS+T+N +++T++ADI++ AVG P+ + +KPGAV+IDVGI+ D K
Sbjct: 178 NHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGADGK- 236
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
L+GDV +ASAITPVPGGVGPMTIA L++ T+T AKR
Sbjct: 237 -----LLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKR 278
|
Length = 282 |
| >gnl|CDD|172668 PRK14180, PRK14180, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 6e-88
Identities = 131/287 (45%), Positives = 186/287 (64%), Gaps = 8/287 (2%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGK+++K +++ + +V K + P L I+VG+ S TYV +K+KAC VGI+
Sbjct: 3 LIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGID 62
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + LPE T+E E+L+ I N+D SVH ILVQLPLP HI++ +++ ++ EKDVDGFH
Sbjct: 63 SQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 122
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
P N+GRL +R ++ L CTPKG + +L YG +G AVV+G SN+VG P + LL
Sbjct: 123 PTNVGRLQLRDKKCLE-SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA 181
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
ATV+ H T + + T +ADI+I AVG+PN + +K GAV+IDVGIN V+
Sbjct: 182 KATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG----- 236
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
++VGDV + + +AITPVPGGVGPMTI LL NT A+ ++
Sbjct: 237 --KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 281
|
Length = 282 |
| >gnl|CDD|172669 PRK14181, PRK14181, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 5e-87
Identities = 136/289 (47%), Positives = 184/289 (63%), Gaps = 10/289 (3%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
++ G A+ I I +S A PGLAV+L+G+ S YV K K +G+
Sbjct: 2 LLKGAPAAEHILATIKENISASSTA----PGLAVVLIGNDPASEVYVGMKVKKATDLGMV 57
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S LP D + ++LK I N+DP++HGILVQLPLP H+D Q+IL A+S +KDVDG H
Sbjct: 58 SKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMP-AALLLQR 260
P+N+G+L + G FIPCTP G IELL Y + G+ ++GRSNIVG P AALL+Q+
Sbjct: 118 PVNMGKLLL-GETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQK 176
Query: 261 E---DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317
+ATV+++HS+++N EI + ADIII+A+G P ++ I AVI+DVG + V A
Sbjct: 177 HPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVP-A 235
Query: 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
+P+GY LVGDV + AITPVPGGVGPMT+AML+ NT S R
Sbjct: 236 ANPKGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLR 284
|
Length = 287 |
| >gnl|CDD|172659 PRK14171, PRK14171, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 4e-84
Identities = 123/284 (43%), Positives = 178/284 (62%), Gaps = 7/284 (2%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
+IDGKA+A +I ++ E+ +K P LA++LVGD S YV+NK K +GI+
Sbjct: 4 IIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGID 63
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
+ V+L +++ I+ N D + GI+VQLPLP ID+ IL+AVS KD+DGFH
Sbjct: 64 TLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
PLN+G L G FIPCT GC+ ++ +Y ++ GK V+IGRSNIVG P + LL +E
Sbjct: 124 PLNVGYL-HSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE 182
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
+ +V+I HS+T N IT +ADI+++A+G P + + P +++IDVGIN +
Sbjct: 183 NCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRIS------ 236
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
G +++GDV +E ITPVPGG+GPMTIA LL NT+ + K
Sbjct: 237 GNKIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFK 280
|
Length = 288 |
| >gnl|CDD|172665 PRK14177, PRK14177, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 254 bits (649), Expect = 5e-83
Identities = 132/284 (46%), Positives = 182/284 (64%), Gaps = 12/284 (4%)
Query: 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGIN 141
++DGK ++++IR+EI + K +P LA ILVG+ S TYV K KAC VG+
Sbjct: 5 LLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMG 64
Query: 142 SFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201
S + L E T+ +E+L I N DP+V GIL+Q P+P IDE++ + +++EKDVDG
Sbjct: 65 SEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVT 124
Query: 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE 261
L+ G+L+M G E ++PCTP G + LL YG D+ GK AVV+GRS I+G P A+LL
Sbjct: 125 TLSFGKLSM-GVET-YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM 182
Query: 262 DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321
+ATV++ HS+T+N I RQADII+ AVG+P ++ WI GAV++D G NP
Sbjct: 183 NATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNPGN------ 236
Query: 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
VGD+ +A + +S TPVPGGVGPMTIA+LL TL S K
Sbjct: 237 ----VGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFK 276
|
Length = 284 |
| >gnl|CDD|201431 pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 2e-54
Identities = 68/118 (57%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
K++DGKA+AK+I++E+ EV+++K G+ P LAVILVGD S YVR+K+KA + +GI
Sbjct: 1 KILDGKALAKKIKEELKEEVAKLK-EKGITPKLAVILVGDDPASQVYVRSKRKAAEELGI 59
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
S + LPED +E+E+L I N DPSVHGILVQLPLP HIDE ILNA+ EKDVD
Sbjct: 60 ESELIRLPEDITEEELLALIEKLNADPSVHGILVQLPLPKHIDENKILNAIDPEKDVD 117
|
Length = 117 |
| >gnl|CDD|133451 cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 3e-34
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 218 IPCTPKGC-------IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270
PCTP ELL++ G + GK+ +V+GRS IVG P LLQR+ ATV
Sbjct: 1 GPCTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW 60
Query: 271 RTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVC 330
+T + AD+++ +P V WIKPGA +I+ +
Sbjct: 61 KTIQLQSKVHDADVVVVGSPKPEKVPTEWIKPGATVINCSPT---------------KLS 105
Query: 331 YEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365
++ E AS P+ GGVG +T+AM + N + S +
Sbjct: 106 GDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSVR 140
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, mono-functional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express a monofunctional DH. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 140 |
| >gnl|CDD|133447 cd01079, NAD_bind_m-THF_DH, NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 6e-17
Identities = 56/207 (27%), Positives = 77/207 (37%), Gaps = 58/207 (28%)
Query: 194 EKDVDGFHPL-------NIGRLAMRGREPLFIPCTPKGCIELLH---------RYGFDIK 237
KDV+G NI L R+ +PCTP +++L YG +
Sbjct: 2 HKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLY 61
Query: 238 GKRAVVIGRSNIVGMPAALLLQREDATV-SI--------------------VHSRTKNPE 276
GK +I RS +VG P A LL + A V S+ V
Sbjct: 62 GKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTL 121
Query: 277 EITRQADIIISAVGQPNM-VRGSWIKPGAVIIDV-GINPVEDAKSPRGYRLVGDVCYEEA 334
+ Q+D++I+ V PN V +K GA+ I+ I E
Sbjct: 122 DCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIKNFEP----------------SV 165
Query: 335 CEVASAITPVPGGVGPMTIAMLLSNTL 361
E AS P +G +TIAMLL N L
Sbjct: 166 KEKASIYVPS---IGKVTIAMLLRNLL 189
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional DHs from S. cerevisiae and certain bacteria. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 197 |
| >gnl|CDD|133449 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-06
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 21/99 (21%)
Query: 220 CTPKGCIELLHRYGF----DIKGKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTKN 274
T G + LL G +KGK VV+G VG A LL V +
Sbjct: 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGE-VGKGIAKLLADEGGKKVVLCDR---- 55
Query: 275 PEEITRQADIIISAVGQPNMVRG---SWIKPGAVIIDVG 310
DI+++A V + I GAV+ID+
Sbjct: 56 --------DILVTATPAGVPVLEEATAKINEGAVVIDLA 86
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 86 |
| >gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.002
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 263 ATVSIVHSRTKNPEEITRQADIIISAVGQPN----------MVRGSWIKPGAVIIDVGI- 311
A + ++S+ + EE ++AD++I AV P MV+ +KPG+VI+DV
Sbjct: 65 ARFTTLYSQAELLEEAVKEADLVIGAVLIPGAKAPKLVTREMVKS--MKPGSVIVDVAAD 122
Query: 312 --NPVEDAK 318
+E ++
Sbjct: 123 QGGCIETSR 131
|
Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149 |
| >gnl|CDD|240630 cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 38.5 bits (91), Expect = 0.004
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 12/57 (21%)
Query: 265 VSIVHSRTKNPEEITRQADIIISAVGQPN----------MVRGSWIKPGAVIIDVGI 311
V+ ++S N EE ++AD++I AV P MV+ +KPG+VI+DV I
Sbjct: 215 VTTLYSNPANLEEALKEADLVIGAVLIPGAKAPKLVTEEMVK--TMKPGSVIVDVAI 269
|
Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms. Length = 359 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 100.0 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 100.0 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 100.0 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 100.0 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14174 | 295 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| KOG4230 | 935 | consensus C1-tetrahydrofolate synthase [Coenzyme t | 100.0 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 100.0 | |
| KOG0089 | 309 | consensus Methylenetetrahydrofolate dehydrogenase/ | 100.0 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 100.0 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 100.0 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 100.0 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 100.0 | |
| PF00763 | 117 | THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cycloh | 100.0 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 99.91 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 99.9 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 99.9 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 99.89 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 99.89 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 99.89 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 99.89 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 99.88 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 99.87 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 99.83 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 99.81 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 99.59 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 99.48 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 99.16 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 99.15 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 99.09 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 99.02 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 98.99 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 98.97 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 98.85 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.74 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 98.74 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.68 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 98.67 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.59 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.46 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 98.45 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.45 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 98.42 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.4 | |
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 98.3 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 98.29 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 98.28 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.27 | |
| PLN02928 | 347 | oxidoreductase family protein | 98.22 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.21 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 98.19 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.09 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 98.05 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 98.02 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 97.99 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.97 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 97.96 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 97.95 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 97.95 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 97.93 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 97.92 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 97.89 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 97.88 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 97.87 | |
| PRK12862 | 763 | malic enzyme; Reviewed | 97.87 | |
| KOG1370 | 434 | consensus S-adenosylhomocysteine hydrolase [Coenzy | 97.86 | |
| COG5322 | 351 | Predicted dehydrogenase [General function predicti | 97.86 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 97.83 | |
| PRK07232 | 752 | bifunctional malic enzyme oxidoreductase/phosphotr | 97.83 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 97.79 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 97.79 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.79 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 97.78 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 97.77 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 97.73 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 97.7 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 97.68 | |
| PRK11790 | 409 | D-3-phosphoglycerate dehydrogenase; Provisional | 97.68 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 97.67 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 97.67 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 97.6 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 97.59 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 97.58 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.56 | |
| COG0281 | 432 | SfcA Malic enzyme [Energy production and conversio | 97.54 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.53 | |
| PRK12861 | 764 | malic enzyme; Reviewed | 97.53 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 97.49 | |
| PF08501 | 83 | Shikimate_dh_N: Shikimate dehydrogenase substrate | 97.43 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.37 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.33 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.3 | |
| KOG0069 | 336 | consensus Glyoxylate/hydroxypyruvate reductase (D- | 97.24 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.23 | |
| PLN02342 | 348 | ornithine carbamoyltransferase | 97.22 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 97.2 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.06 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.04 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.03 | |
| PF02423 | 313 | OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst | 97.0 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.95 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.95 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.95 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.94 | |
| PLN02256 | 304 | arogenate dehydrogenase | 96.93 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.93 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.91 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.9 | |
| PRK14804 | 311 | ornithine carbamoyltransferase; Provisional | 96.9 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 96.87 | |
| cd05312 | 279 | NAD_bind_1_malic_enz NAD(P) binding domain of mali | 96.85 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.81 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 96.8 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 96.76 | |
| cd00762 | 254 | NAD_bind_malic_enz NAD(P) binding domain of malic | 96.75 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.74 | |
| PLN03129 | 581 | NADP-dependent malic enzyme; Provisional | 96.74 | |
| PRK13814 | 310 | pyrB aspartate carbamoyltransferase catalytic subu | 96.7 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 96.69 | |
| PRK03515 | 336 | ornithine carbamoyltransferase subunit I; Provisio | 96.66 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.6 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.6 | |
| PRK01713 | 334 | ornithine carbamoyltransferase; Provisional | 96.59 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 96.57 | |
| PRK12562 | 334 | ornithine carbamoyltransferase subunit F; Provisio | 96.57 | |
| PRK13529 | 563 | malate dehydrogenase; Provisional | 96.56 | |
| PF03949 | 255 | Malic_M: Malic enzyme, NAD binding domain; InterPr | 96.56 | |
| PRK00856 | 305 | pyrB aspartate carbamoyltransferase catalytic subu | 96.55 | |
| PRK02255 | 338 | putrescine carbamoyltransferase; Provisional | 96.55 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 96.53 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.52 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.52 | |
| TIGR00670 | 301 | asp_carb_tr aspartate carbamoyltransferase. Ornith | 96.51 | |
| PRK04284 | 332 | ornithine carbamoyltransferase; Provisional | 96.5 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 96.5 | |
| PRK02102 | 331 | ornithine carbamoyltransferase; Validated | 96.5 | |
| PRK14031 | 444 | glutamate dehydrogenase; Provisional | 96.49 | |
| PRK11891 | 429 | aspartate carbamoyltransferase; Provisional | 96.45 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 96.44 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.42 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.42 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 96.41 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.33 | |
| PLN02527 | 306 | aspartate carbamoyltransferase | 96.33 | |
| TIGR00658 | 304 | orni_carb_tr ornithine carbamoyltransferase. Most | 96.31 | |
| TIGR03316 | 357 | ygeW probable carbamoyltransferase YgeW. Members o | 96.24 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.24 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.2 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.19 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.19 | |
| PTZ00317 | 559 | NADP-dependent malic enzyme; Provisional | 96.17 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.15 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.13 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 96.12 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.11 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.11 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.1 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.09 | |
| PRK00779 | 304 | ornithine carbamoyltransferase; Provisional | 96.07 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.0 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.0 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.98 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 95.97 | |
| PRK14805 | 302 | ornithine carbamoyltransferase; Provisional | 95.95 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.94 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.92 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 95.91 | |
| PRK08192 | 338 | aspartate carbamoyltransferase; Provisional | 95.9 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 95.85 | |
| PLN02712 | 667 | arogenate dehydrogenase | 95.8 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 95.77 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 95.76 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.75 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 95.74 | |
| PRK09414 | 445 | glutamate dehydrogenase; Provisional | 95.66 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 95.66 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.65 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 95.62 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 95.6 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 95.56 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.55 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 95.54 | |
| PRK07200 | 395 | aspartate/ornithine carbamoyltransferase family pr | 95.54 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 95.54 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 95.51 | |
| PRK14030 | 445 | glutamate dehydrogenase; Provisional | 95.46 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.44 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.4 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 95.37 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.36 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 95.35 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 95.32 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.31 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 95.3 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.29 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 95.27 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 95.27 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.26 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 95.26 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.22 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 95.22 | |
| PLN02477 | 410 | glutamate dehydrogenase | 95.2 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 95.2 | |
| PRK04523 | 335 | N-acetylornithine carbamoyltransferase; Reviewed | 95.2 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.18 | |
| PRK06199 | 379 | ornithine cyclodeaminase; Validated | 95.14 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 95.07 | |
| COG0078 | 310 | ArgF Ornithine carbamoyltransferase [Amino acid tr | 95.07 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.06 | |
| PRK01368 | 454 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.99 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.97 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 94.97 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 94.96 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 94.96 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 94.96 | |
| COG0771 | 448 | MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas | 94.93 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 94.92 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 94.91 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.89 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 94.88 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 94.87 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 94.86 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 94.85 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.84 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 94.77 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 94.75 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 94.72 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 94.72 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 94.71 | |
| COG0677 | 436 | WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas | 94.69 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.65 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 94.65 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.63 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.6 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 94.55 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 94.54 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 94.52 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 94.5 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 94.49 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 94.49 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 94.45 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 94.45 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 94.44 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 94.43 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 94.42 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 94.4 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 94.39 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 94.38 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 94.36 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.32 | |
| PRK05717 | 255 | oxidoreductase; Validated | 94.32 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 94.31 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 94.3 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 94.29 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 94.27 | |
| KOG0068 | 406 | consensus D-3-phosphoglycerate dehydrogenase, D-is | 94.25 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 94.24 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 94.24 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.18 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 94.18 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 94.16 | |
| PRK04690 | 468 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.15 | |
| PRK05225 | 487 | ketol-acid reductoisomerase; Validated | 94.15 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.12 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 94.11 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 94.1 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 94.1 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 94.06 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.05 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.03 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 94.03 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 94.03 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 94.03 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 94.02 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 94.01 | |
| PRK02006 | 498 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.0 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 94.0 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.96 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 93.95 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 93.95 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 93.93 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 93.93 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 93.92 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 93.92 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.92 | |
| PRK08223 | 287 | hypothetical protein; Validated | 93.89 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 93.89 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 93.89 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 93.88 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 93.87 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 93.87 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 93.84 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 93.79 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 93.75 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 93.75 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 93.72 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 93.72 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 93.71 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 93.71 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 93.7 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 93.69 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 93.68 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 93.66 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 93.65 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 93.65 | |
| PF13738 | 203 | Pyr_redox_3: Pyridine nucleotide-disulphide oxidor | 93.64 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 93.6 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 93.59 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 93.58 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 93.58 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.56 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 93.56 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 93.55 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 93.55 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 93.54 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 93.54 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 93.52 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 93.51 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 93.48 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 93.46 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 93.46 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 93.46 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 93.45 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 93.43 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 93.43 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 93.41 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.38 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 93.38 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 93.37 | |
| TIGR03376 | 342 | glycerol3P_DH glycerol-3-phosphate dehydrogenase ( | 93.34 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 93.33 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 93.29 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 93.29 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 93.28 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 93.28 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.27 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 93.26 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 93.24 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 93.24 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 93.23 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.23 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 93.23 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 93.18 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.18 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 93.17 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.17 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 93.17 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 93.16 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 93.1 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 93.09 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 93.08 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 93.03 | |
| PRK10727 | 343 | DNA-binding transcriptional regulator GalR; Provis | 92.98 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 92.98 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 92.96 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 92.93 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 92.91 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 92.91 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 92.91 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 92.9 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 92.89 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 92.89 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 92.89 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 92.87 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 92.85 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 92.82 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 92.81 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 92.8 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 92.8 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 92.79 | |
| PLN02602 | 350 | lactate dehydrogenase | 92.78 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 92.69 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 92.69 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 92.68 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 92.66 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 92.64 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 92.62 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 92.61 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 92.61 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 92.59 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 92.54 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 92.53 | |
| PRK00683 | 418 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 92.51 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 92.5 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 92.49 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.47 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 92.46 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 92.45 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 92.44 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 92.44 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 92.43 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 92.41 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 92.36 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 92.35 | |
| COG0059 | 338 | IlvC Ketol-acid reductoisomerase [Amino acid trans | 92.35 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 92.32 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 92.32 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 92.31 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 92.3 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 92.3 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 92.28 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 92.28 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 92.24 | |
| PRK11303 | 328 | DNA-binding transcriptional regulator FruR; Provis | 92.22 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 92.21 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 92.2 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 92.2 | |
| PRK08643 | 256 | acetoin reductase; Validated | 92.19 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 92.18 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 92.15 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 92.14 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 92.11 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 92.09 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 92.08 | |
| COG2072 | 443 | TrkA Predicted flavoprotein involved in K+ transpo | 92.07 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 92.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 91.99 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 91.98 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 91.97 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 91.95 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 91.91 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 91.9 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 91.89 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 91.89 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 91.88 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 91.85 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 91.81 | |
| PLN00106 | 323 | malate dehydrogenase | 91.81 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 91.78 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 91.76 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 91.75 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 91.75 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 91.75 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 91.73 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 91.72 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 91.7 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 91.7 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 91.69 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 91.69 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 91.62 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 91.59 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 91.59 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 91.57 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 91.51 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 91.51 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 91.49 | |
| PTZ00345 | 365 | glycerol-3-phosphate dehydrogenase; Provisional | 91.48 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 91.48 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 91.39 | |
| PRK10423 | 327 | transcriptional repressor RbsR; Provisional | 91.33 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 91.3 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 91.28 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 91.28 | |
| PRK13376 | 525 | pyrB bifunctional aspartate carbamoyltransferase c | 91.23 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 91.21 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 91.2 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 91.16 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 91.14 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 91.13 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 91.13 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 91.1 | |
| PF00185 | 158 | OTCace: Aspartate/ornithine carbamoyltransferase, | 91.09 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 91.06 | |
| PRK12779 | 944 | putative bifunctional glutamate synthase subunit b | 91.04 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 91.03 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 91.02 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 90.93 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 90.92 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 90.91 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 90.89 | |
| PRK03806 | 438 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 90.86 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 90.83 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 90.8 |
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-105 Score=788.74 Aligned_cols=363 Identities=81% Similarity=1.197 Sum_probs=336.9
Q ss_pred ccceeccccccccccccccccccccCCCccccccccccccCCCCCCccccccceeecCCCCCcccccccccccccceeee
Q 017438 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVID 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a~ild 84 (371)
+|++|+|||||+++||+||+|..+ ||+|++..|+.. +...++.+...+.|.+.+++. .....+.+++++|++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ild 77 (364)
T PLN02616 2 ASLMFTDCSSSTTSRLIHFNRIST-PFNGTFLLRRCV--GPLRVRTTASGRGCCINSSSS-PSPVINADTGSEGGAKVID 77 (364)
T ss_pred chhhhccccccchhhhhHHhhccc-ccccccccceec--cccccCccccccccccCCCCC-cchhhhhhcCccccCeEeE
Confidence 689999999999999999999866 899999998733 233344444457888877776 4555667888998889999
Q ss_pred cHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhc
Q 017438 85 GKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFN 164 (371)
Q Consensus 85 Gk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN 164 (371)
||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||
T Consensus 78 Gk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN 157 (364)
T PLN02616 78 GKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFN 157 (364)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEE
Q 017438 165 DDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVI 244 (371)
Q Consensus 165 ~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVI 244 (371)
+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|++.++|+||||.||+++|++|+++++||+|+||
T Consensus 158 ~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVI 237 (364)
T PLN02616 158 NDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVI 237 (364)
T ss_pred CCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999976546789999999999999999999999999999
Q ss_pred cCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCce
Q 017438 245 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYR 324 (371)
Q Consensus 245 G~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~k 324 (371)
|||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+++++++++|+|
T Consensus 238 GRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~~~~~~~g~k 317 (364)
T PLN02616 238 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVEDASSPRGYR 317 (364)
T ss_pred CCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccccccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999976544455668
Q ss_pred eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 325 LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 325 l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
++|||||+++.++|++||||||||||||++|||+|++++++++.+++
T Consensus 318 lvGDVdfe~v~~~as~ITPVPGGVGpmTva~Ll~N~~~aa~~~~~~~ 364 (364)
T PLN02616 318 LVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTSAKRIHNFQ 364 (364)
T ss_pred EEecCcHHHHHhhccccCCCCCchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999998874
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-100 Score=752.86 Aligned_cols=344 Identities=59% Similarity=0.952 Sum_probs=309.7
Q ss_pred ccceeccccccccccccccccccccCCCccccccccccccCCCCCCccccccceeecCCCCCcccccccccccccceeee
Q 017438 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVID 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a~ild 84 (371)
+|++|+|||||+|+||++|+|....| |+ ...-.+..|+ +.+ . ....++.++|+.+++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~-~~~-----~---~~~~~~~~~~~~~~ild 60 (345)
T PLN02897 2 LASAHTKAFRLATRDVHCFSSILVSP---------PL---VSLDLPENWI-PYS-----D---PPPPVSFETEQKTVVID 60 (345)
T ss_pred chhhhhhccccchhhhhhhhhhhcCC---------cc---cccccccCCC-ccc-----c---ccccccccccccceEee
Confidence 67999999999999999998775544 11 0111112221 111 0 11112355666789999
Q ss_pred cHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhc
Q 017438 85 GKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFN 164 (371)
Q Consensus 85 Gk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN 164 (371)
||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||
T Consensus 61 Gk~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN 140 (345)
T PLN02897 61 GNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFN 140 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEE
Q 017438 165 DDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVI 244 (371)
Q Consensus 165 ~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVI 244 (371)
+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+++++|+||||.||+++|++|+++++||+|+||
T Consensus 141 ~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVI 220 (345)
T PLN02897 141 EDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVI 220 (345)
T ss_pred CCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999876545789999999999999999999999999999
Q ss_pred cCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCce
Q 017438 245 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYR 324 (371)
Q Consensus 245 G~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~k 324 (371)
|||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+.+++++..|+|
T Consensus 221 GRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~~~~~~~g~k 300 (345)
T PLN02897 221 GRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYR 300 (345)
T ss_pred CCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccccccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999976544445668
Q ss_pred eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 325 LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 325 l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 301 lvGDVdfe~v~~~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 301 LVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred eEecccHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999874
|
|
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-93 Score=681.31 Aligned_cols=282 Identities=57% Similarity=0.921 Sum_probs=274.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|+++++++++++++++++.++.|+|++|+|||||+|+.|+++|.|+|+++||.++.++||++++|+||++.|
T Consensus 1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I 80 (283)
T COG0190 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI 80 (283)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence 37999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|..+ ++.|+||||.|++++|++|+++++||+
T Consensus 81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~ 158 (283)
T COG0190 81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN 158 (283)
T ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 788999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||||++++|+++|||||+||++|+|+.+++++|||||+|+|+|+++++||||||++|||+|+|++++
T Consensus 159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~~---- 234 (283)
T COG0190 159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVND---- 234 (283)
T ss_pred EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|++|||||++++++|+|||||||||||||++|||+|++++++++.+.
T Consensus 235 --~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 235 --GKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred --CceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 289999999999999999999999999999999999999999987764
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-92 Score=679.30 Aligned_cols=282 Identities=43% Similarity=0.757 Sum_probs=273.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 2 ~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (288)
T PRK14171 2 NNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISK 81 (288)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 58999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|. .++|+||||.||+++|++|+++++||
T Consensus 82 I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~GK 160 (288)
T PRK14171 82 INELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTGK 160 (288)
T ss_pred HHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999763 37899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|++++|+++|||||+||++|+||++++++|||||+|+|+|++|++||||||++|||+|+|+.++
T Consensus 161 ~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~~--- 237 (288)
T PRK14171 161 NVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRISG--- 237 (288)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.++|+|||||||||||||++|||+|+++++++.+
T Consensus 238 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 238 --N-KIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred --C-CeECCccHHHHHhhceEeCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 2 899999999999999999999999999999999999999998654
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=679.56 Aligned_cols=290 Identities=64% Similarity=1.080 Sum_probs=278.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 9 ~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~ 88 (299)
T PLN02516 9 AQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISK 88 (299)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.++..++|+||||.||+++|++|+++++||
T Consensus 89 I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk 168 (299)
T PLN02516 89 VHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGK 168 (299)
T ss_pred HHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999765467899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+.+++..
T Consensus 169 ~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~~~~~ 248 (299)
T PLN02516 169 KAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVSDPSK 248 (299)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754333
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
..|++++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus 249 ~~g~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 249 KSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred cCCCceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 33558999999999999999999999999999999999999999999974
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-91 Score=676.56 Aligned_cols=282 Identities=51% Similarity=0.895 Sum_probs=274.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 80 (284)
T PRK14170 2 GEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSV 80 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999999887 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (284)
T PRK14170 81 VEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGK 158 (284)
T ss_pred HHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 56899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||++++|+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 159 ~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~~--- 235 (284)
T PRK14170 159 RAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDEN--- 235 (284)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++++.+
T Consensus 236 --g-kl~GDvdfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 283 (284)
T PRK14170 236 --N-KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKM 283 (284)
T ss_pred --C-CeecccchHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence 2 89999999999999999999999999999999999999999998875
|
|
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-91 Score=678.00 Aligned_cols=286 Identities=48% Similarity=0.807 Sum_probs=274.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (293)
T PRK14185 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV 81 (293)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~ 159 (293)
T PRK14185 82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK 159 (293)
T ss_pred HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|++++
T Consensus 160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~~ 239 (293)
T PRK14185 160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVPD 239 (293)
T ss_pred EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCccccc
Confidence 999999999999999999998 7999999999999999999999999999999999999999999999999999755
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 240 ~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 291 (293)
T PRK14185 240 ATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKAI 291 (293)
T ss_pred ccccCCCeeEcCCCHHHHHhhccEeCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3333455899999999999999999999999999999999999999997643
|
|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-91 Score=678.94 Aligned_cols=293 Identities=50% Similarity=0.822 Sum_probs=277.2
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|+|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~ 80 (297)
T PRK14168 1 MSAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELL 80 (297)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999988789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~ 160 (297)
T PRK14168 81 ALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETS 160 (297)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998754478999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~ 313 (371)
||+|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+
T Consensus 161 Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 161 GAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNR 240 (297)
T ss_pred CCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCc
Confidence 999999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 314 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 314 ~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+.+..+..+++++|||||+++.++|++||||||||||||++|||+|+++++++|++.
T Consensus 241 ~~~~~~~g~~~~~GDVdfe~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 241 VGTNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred cCccccCCCcceeccccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 632111112249999999999999999999999999999999999999999999873
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-91 Score=671.93 Aligned_cols=281 Identities=48% Similarity=0.814 Sum_probs=272.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
|++||||++|+++++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 79 (282)
T PRK14169 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK 79 (282)
T ss_pred CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 468999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.+ .++|+||||+||+++|++|+++++||
T Consensus 80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 157 (282)
T PRK14169 80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK 157 (282)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|++.+
T Consensus 158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~~--- 234 (282)
T PRK14169 158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGAD--- 234 (282)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus 235 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 281 (282)
T PRK14169 235 --G-KLLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKRRAN 281 (282)
T ss_pred --C-CeeecCcHHHHHhhccEecCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 2 8999999999999999999999999999999999999999987643
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-91 Score=673.85 Aligned_cols=286 Identities=48% Similarity=0.784 Sum_probs=274.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~ 81 (294)
T PRK14187 2 TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEK 81 (294)
T ss_pred cEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk 161 (294)
T PRK14187 82 INELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGS 161 (294)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999875446899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+++++.
T Consensus 162 ~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~~~~- 240 (294)
T PRK14187 162 DAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEEGG- 240 (294)
T ss_pred EEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999974421
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
..|++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus 241 --~~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 287 (294)
T PRK14187 241 --VKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQK 287 (294)
T ss_pred --ccceeCCccHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHHhh
Confidence 12799999999999999999999999999999999999999998764
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-91 Score=674.98 Aligned_cols=287 Identities=49% Similarity=0.828 Sum_probs=275.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|+++++++++++++|+++ |++|+||+|+||+||+|..|+++|+|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~ 80 (297)
T PRK14167 2 TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDT 80 (297)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999999876 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| ++.|+||||.||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (297)
T PRK14167 81 IDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEGA 158 (297)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 315 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~ 315 (371)
+|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+++
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~~ 238 (297)
T PRK14167 159 DVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRVD 238 (297)
T ss_pred EEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccC
Confidence 9999999999999999999998 899999999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 316 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+. +.+|++++|||||+++.++|++||||||||||||++|||+|+++++++++++
T Consensus 239 ~~-~~~g~kl~GDVd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 239 AD-TEKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred cc-cccCCceeecCcHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 31 2235589999999999999999999999999999999999999999988765
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-91 Score=670.75 Aligned_cols=280 Identities=51% Similarity=0.820 Sum_probs=271.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14166 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI 80 (282)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|. +++|+||||+||+++|++|+++++||+
T Consensus 81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~ 159 (282)
T PRK14166 81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD 159 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 468999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||.+||||++++|+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||||++|||+|+|+.++
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~~---- 235 (282)
T PRK14166 160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES---- 235 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 236 -g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 236 -G-KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred -C-CeeCCCCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 2 799999999999999999999999999999999999999998754
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-91 Score=669.91 Aligned_cols=279 Identities=52% Similarity=0.866 Sum_probs=270.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14182 2 NLIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALI 80 (282)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc-cccCCHHHHHHHHHHhCCCCCCC
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL-FIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~-~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| .++ |+||||.||+++|++|+++++||
T Consensus 81 ~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk 158 (282)
T PRK14182 81 ARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGK 158 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999976 445 89999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+..+
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~~--- 235 (282)
T PRK14182 159 RALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLAD--- 235 (282)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| +++|||||+++.++|+++|||||||||||++|||+|+++++++|.
T Consensus 236 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 236 --G-KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred --C-CeeCCCCHHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 2 799999999999999999999999999999999999999999884
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-91 Score=671.33 Aligned_cols=283 Identities=55% Similarity=0.904 Sum_probs=274.5
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|+++++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 ~~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 79 (284)
T PRK14190 1 MMAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELL 79 (284)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~ 157 (284)
T PRK14190 80 ALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDIS 157 (284)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||||++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||||++|||+|+|++++
T Consensus 158 Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~~- 236 (284)
T PRK14190 158 GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLEN- 236 (284)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 237 ----g-kl~GDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 237 ----G-KLCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred ----C-CeeccCcHHHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999999875
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=668.22 Aligned_cols=277 Identities=42% Similarity=0.738 Sum_probs=268.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++++++++++++++++++..+|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (278)
T PRK14172 2 GQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINE 81 (278)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999988733569999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~Gk 159 (278)
T PRK14172 82 IEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGK 159 (278)
T ss_pred HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999977 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 160 ~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~g--- 236 (278)
T PRK14172 160 EVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVNG--- 236 (278)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
|++|||||+++.++|++||||||||||||++|||+|++++++
T Consensus 237 ----kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 237 ----KITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK 278 (278)
T ss_pred ----ceeeeccHHHHHhhccEecCCCCCccHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999864
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-90 Score=667.67 Aligned_cols=279 Identities=47% Similarity=0.775 Sum_probs=271.0
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++|++++++++++|+++++.+|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 ~~~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~ 80 (284)
T PRK14177 1 MSPILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELL 80 (284)
T ss_pred CCCeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 56789999999999999999999999988778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~ 158 (284)
T PRK14177 81 GVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVT 158 (284)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||||++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||||++|||+|+|+
T Consensus 159 Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~---- 234 (284)
T PRK14177 159 GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP---- 234 (284)
T ss_pred CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ------~~~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 279 (284)
T PRK14177 235 ------GNVGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHF 279 (284)
T ss_pred ------cccCCcCHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHhcc
Confidence 479999999999999999999999999999999999999997654
|
|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-90 Score=667.51 Aligned_cols=280 Identities=52% Similarity=0.837 Sum_probs=272.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (286)
T PRK14184 2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI 81 (286)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~ 159 (286)
T PRK14184 82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK 159 (286)
T ss_pred HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhcc----CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~----~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||+|+++||++ +|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~~ 239 (286)
T PRK14184 160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDD 239 (286)
T ss_pred EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccCC
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++|||||+++.++|+|||||||||||||++|||+|+++++++..|
T Consensus 240 -------~l~GDVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~ 285 (286)
T PRK14184 240 -------GLVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKERVG 285 (286)
T ss_pred -------CccCCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhC
Confidence 6999999999999999999999999999999999999999987765
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-90 Score=665.19 Aligned_cols=280 Identities=46% Similarity=0.795 Sum_probs=271.3
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
.+||||++|++|++++++++++|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (282)
T PRK14180 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI 81 (282)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999987789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+++.|+ ..+|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~ 160 (282)
T PRK14180 82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY 160 (282)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 378999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~g---- 236 (282)
T PRK14180 161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG---- 236 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999632
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
|++|||||+++.++|+|||||||||||||++|||+|+++++++++
T Consensus 237 ---kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 237 ---KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred ---ceeCCcCHHHHHhhccEeccCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 799999999999999999999999999999999999999998764
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-90 Score=667.86 Aligned_cols=286 Identities=51% Similarity=0.830 Sum_probs=274.4
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|+++++++++++++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (297)
T PRK14186 2 ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEAL 81 (297)
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| ...|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk 159 (297)
T PRK14186 82 IAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAGK 159 (297)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 46799999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++++++|||+|++|||+|+|+.+++ +
T Consensus 160 ~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~~~-~ 238 (297)
T PRK14186 160 KAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLPSS-D 238 (297)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996532 1
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
.+| |++|||||+++.++|++||||||||||||++|||+|++++++++.+
T Consensus 239 ~~g-kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 239 GKT-RLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred cCC-ceeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence 124 8999999999999999999999999999999999999999987653
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-90 Score=662.83 Aligned_cols=279 Identities=53% Similarity=0.875 Sum_probs=270.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|+++++++++.|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (281)
T PRK14183 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI 81 (281)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999874489999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|++|+|+++.| +++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (281)
T PRK14183 82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD 159 (281)
T ss_pred HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||+|++|||+|+|+.++
T Consensus 160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~~---- 235 (281)
T PRK14183 160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTED---- 235 (281)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
| |++|||||+++.+++++||||||||||||++|||+|+++++++.
T Consensus 236 -g-kl~GDVd~~~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~ 280 (281)
T PRK14183 236 -G-RLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAKNR 280 (281)
T ss_pred -C-CeECCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 2 89999999999999999999999999999999999999999753
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-90 Score=665.01 Aligned_cols=280 Identities=47% Similarity=0.787 Sum_probs=267.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017438 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 161 (371)
Q Consensus 82 ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~ 161 (371)
+||||++|++|++++++++++| +++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus 2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~ 77 (287)
T PRK14181 2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH 77 (287)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999988 679999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017438 162 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241 (371)
Q Consensus 162 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~v 241 (371)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||+++|++|+++++||+|
T Consensus 78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v 156 (287)
T PRK14181 78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV 156 (287)
T ss_pred HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999763 4679999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 242 VVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 242 vVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|++.+.
T Consensus 157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~~~ 236 (287)
T PRK14181 157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVPAA 236 (287)
T ss_pred EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
..+|++++|||||+++.++|+|+|||||||||||++|||+|++++++++
T Consensus 237 -~~~g~kl~GDVd~e~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 237 -NPKGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred -cCCCCeeEeccchHHHHhhcccccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 1224589999999999999999999999999999999999999999865
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=663.91 Aligned_cols=284 Identities=54% Similarity=0.878 Sum_probs=275.3
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|+++++++++++++|+++++++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 M~~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~ 80 (285)
T PRK10792 1 MTAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELL 80 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999988788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~ 158 (285)
T PRK10792 81 ALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTY 158 (285)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|++++
T Consensus 159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~~- 237 (285)
T PRK10792 159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLED- 237 (285)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccccccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| +++|||||+++.++|+++|||||||||||++|||+|+++++++|++
T Consensus 238 ----g-k~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 238 ----G-KLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred ----C-CcCCCcCHHHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 7999999999999999999999999999999999999999999985
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-89 Score=662.56 Aligned_cols=281 Identities=46% Similarity=0.828 Sum_probs=270.6
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++.+||||++|++|+++++++++.|+++ |++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~ 80 (284)
T PRK14193 2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNA 80 (284)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 4679999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| ...|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~G 158 (284)
T PRK14193 81 VIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 5679999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhcc--CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR--EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~--~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|+|||||++||+|++++|++ +|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|++++
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~~ 238 (284)
T PRK14193 159 AHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAGD 238 (284)
T ss_pred CEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccCC
Confidence 9999999999999999999998 79999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||| +++.++|++||||||||||||++|||+|+++++++..|
T Consensus 239 -----g-kl~GDvd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (284)
T PRK14193 239 -----G-KLVGDVH-PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG 284 (284)
T ss_pred -----C-cEEeecC-HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHHhhC
Confidence 2 8999999 88999999999999999999999999999999987543
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-89 Score=661.13 Aligned_cols=283 Identities=52% Similarity=0.846 Sum_probs=273.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 M~~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~ 79 (285)
T PRK14189 1 MTAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELL 79 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 157 (285)
T PRK14189 80 ARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLR 157 (285)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++++++|+|||++|||+|+|+..+
T Consensus 158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~~- 236 (285)
T PRK14189 158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDA- 236 (285)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|++++++++..
T Consensus 237 ----g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~ 283 (285)
T PRK14189 237 ----G-KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283 (285)
T ss_pred ----C-CeeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999998764
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-89 Score=661.00 Aligned_cols=280 Identities=48% Similarity=0.811 Sum_probs=271.5
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++++||||++|++|+++++++++.|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus 7 ~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~ 86 (287)
T PRK14176 7 ESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLE 86 (287)
T ss_pred ceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 37899999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| +++|+||||+||+++|++|+++++|
T Consensus 87 ~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~G 164 (287)
T PRK14176 87 LIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIEG 164 (287)
T ss_pred HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 5689999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~ 318 (371)
|+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus 165 k~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~--- 241 (287)
T PRK14176 165 KNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE--- 241 (287)
T ss_pred CEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
| |++|||||+++.++|+++|||||||||||++|||+|+++++++.
T Consensus 242 ---g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 242 ---D-KVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred ---C-CccCCcCHHHHHhhceEcCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 2 89999999999999999999999999999999999999998754
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-89 Score=657.33 Aligned_cols=280 Identities=49% Similarity=0.783 Sum_probs=272.2
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++.|++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (285)
T PRK14191 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI 81 (285)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999987789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (285)
T PRK14191 82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD 159 (285)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|+|++|+++|||||+||++|+++++++++|||||+|+|+|++++++|||||++|||+|+|++++
T Consensus 160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~~---- 235 (285)
T PRK14191 160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLND---- 235 (285)
T ss_pred EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.+++++||||||||||||++|||+|+++++++..
T Consensus 236 -g-klvGDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 236 -G-RLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred -C-ceeccccHHHHhhhccEEecCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 2 899999999999999999999999999999999999999998754
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-88 Score=655.11 Aligned_cols=282 Identities=52% Similarity=0.883 Sum_probs=274.2
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++++++++++++++++++|++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (284)
T PRK14179 2 TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDL 81 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 159 (284)
T PRK14179 82 IERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEGK 159 (284)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||+|++||+|+|++|+++|||||+||++|+++++++++|||||+++|+|++++++|+++|++|||+|+|++.+
T Consensus 160 ~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~~--- 236 (284)
T PRK14179 160 HAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDEN--- 236 (284)
T ss_pred EEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|+-
T Consensus 237 --g-kl~GDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14179 237 --G-KLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSLH 283 (284)
T ss_pred --C-CeecCccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 2 8999999999999999999999999999999999999999999863
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-88 Score=654.65 Aligned_cols=280 Identities=49% Similarity=0.821 Sum_probs=266.9
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++|++++++++++| +++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 m~~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 76 (287)
T PRK14173 1 MAARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELL 76 (287)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999988 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||+++|++|+++++
T Consensus 77 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~ 154 (287)
T PRK14173 77 ELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLA 154 (287)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 467999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||+|++|||+|+|++.+.
T Consensus 155 Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~~~ 234 (287)
T PRK14173 155 GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVGGN 234 (287)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996210
Q ss_pred CCCCCce--eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 318 KSPRGYR--LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 318 ~~~~g~k--l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+| | ++|||| +++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ---~g-k~~l~GDVd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (287)
T PRK14173 235 ---GG-RDILTGDVH-PEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALRRR 282 (287)
T ss_pred ---CC-ceeeecccc-HhHHhhCcEEecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 13 5 999999 6789999999999999999999999999999998754
|
|
| >PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-88 Score=654.95 Aligned_cols=288 Identities=54% Similarity=0.876 Sum_probs=274.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (295)
T PRK14174 2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKI 81 (295)
T ss_pred EEEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+++.|+..++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~ 161 (295)
T PRK14174 82 EDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKH 161 (295)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998753478999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhcc----CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~----~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||+|+++||++ +|++|++||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|++++++
T Consensus 162 vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~~ 241 (295)
T PRK14174 162 CVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIED 241 (295)
T ss_pred EEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeecccccc
Confidence 99999999999999999988 78999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 242 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 293 (295)
T PRK14174 242 PSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVN 293 (295)
T ss_pred ccccCCCceECCcCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3333455899999999999999999999999999999999999999998764
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=650.64 Aligned_cols=284 Identities=51% Similarity=0.840 Sum_probs=273.6
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++++++++++++.|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~ 79 (286)
T PRK14175 1 MVAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVL 79 (286)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~ 157 (286)
T PRK14175 80 NELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLE 157 (286)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|.++||+||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+++..+
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~~- 236 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDEN- 236 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998544
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| |++|||||+++.++++++|||||||||||++|||+|+++++++..+.
T Consensus 237 ----g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 237 ----G-KLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred ----C-CeecCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 89999999999999999999999999999999999999999876653
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-87 Score=649.72 Aligned_cols=286 Identities=52% Similarity=0.862 Sum_probs=274.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 2 m~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~ 80 (301)
T PRK14194 2 MSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLL 80 (301)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 55679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 158 (301)
T PRK14194 81 ALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLT 158 (301)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||+|++||+|++.+|+++|++||+||++|+++++++++|||||+++|.|++++++|+|+|++|||+|+|++.+.
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~~~ 238 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRIDDD 238 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCC-ceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 318 KSPRG-YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 318 ~~~~g-~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| +|++|||||+++.++|++||||||||||||++|||+|+++++++|+..
T Consensus 239 ----g~~kl~GDvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~~ 288 (301)
T PRK14194 239 ----GRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAHA 288 (301)
T ss_pred ----CCcceecccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 2 279999999999999999999999999999999999999999998754
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=639.68 Aligned_cols=273 Identities=51% Similarity=0.839 Sum_probs=265.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017438 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 161 (371)
Q Consensus 82 ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~ 161 (371)
+||||++|++|+++++++++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|+
T Consensus 2 il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~ 77 (279)
T PRK14178 2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIR 77 (279)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017438 162 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241 (371)
Q Consensus 162 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~v 241 (371)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+|
T Consensus 78 ~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V 155 (279)
T PRK14178 78 RLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRA 155 (279)
T ss_pred HHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999976 5789999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCC
Q 017438 242 VVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321 (371)
Q Consensus 242 vVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~ 321 (371)
+|+|+|..||+|++++|.++||+||+||++|+++++++++|||||+|+|+|++|+++|+|||++|||+|+++.++
T Consensus 156 ~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~g----- 230 (279)
T PRK14178 156 VVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVNG----- 230 (279)
T ss_pred EEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccCC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999632
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 322 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
|++|||||+++.++++++|||||||||||++|||+|++++++++
T Consensus 231 --kl~GDvdf~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 231 --KLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred --CCcCCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999864
|
|
| >KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-86 Score=671.94 Aligned_cols=292 Identities=53% Similarity=0.901 Sum_probs=286.3
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEV 156 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el 156 (371)
|++.||+||++|++++++++++|+.+|++. +++|.|+|||||++++|..|+|+|.|+++++||++.+++||++++|-||
T Consensus 1 ~~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~el 80 (935)
T KOG4230|consen 1 MVAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGEL 80 (935)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHH
Confidence 467899999999999999999999999887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCC
Q 017438 157 LKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI 236 (371)
Q Consensus 157 ~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l 236 (371)
+..|.+||+|+.||||+||+|||.|||++.+.++|+|+||||||+..|.|+|..++.++.|+||||.|||+||+++++.+
T Consensus 81 l~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v 160 (935)
T KOG4230|consen 81 LREIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFV 160 (935)
T ss_pred HHHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
.||++||+|||.+||.|++.+|...|+|||+|||+|+++.+++.+|||||.|+|.|+||+.||+|||++|||||+|++.|
T Consensus 161 ~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvpD 240 (935)
T KOG4230|consen 161 AGKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVPD 240 (935)
T ss_pred ccceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++..|+|++|||||+++.+++++||||||||||||+||||+|++++++|+.-
T Consensus 241 ~~Kksg~klvGDVdfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r~ 293 (935)
T KOG4230|consen 241 PSKKSGFKLVGDVDFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQRE 293 (935)
T ss_pred CCCcccceEeeecchHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998763
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-84 Score=632.38 Aligned_cols=287 Identities=56% Similarity=0.913 Sum_probs=273.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (296)
T PRK14188 2 ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLAL 81 (296)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++||
T Consensus 82 i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~Gk 159 (296)
T PRK14188 82 IARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSGL 159 (296)
T ss_pred HHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||+.+|+|+|.+|+++|++|++||++|+++++++++|||||+++|.|++++++|+++|++|||+|+|++++..+
T Consensus 160 ~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~~~~~ 239 (296)
T PRK14188 160 NAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEK 239 (296)
T ss_pred EEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642111
Q ss_pred CCCc-eeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGY-RLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
..|+ +++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 240 ~~g~~~l~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 240 GEGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred cCCCceeeCCCCHHHHHhhccEecCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 1133 799999999999999999999999999999999999999998754
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-81 Score=604.67 Aligned_cols=282 Identities=48% Similarity=0.804 Sum_probs=272.4
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|+++|+++||+++++.||++++++||++
T Consensus 2 ~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~ 81 (283)
T PRK14192 2 MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLA 81 (283)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 35799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|++|.|+++.| ++.|.||||.|++++|++|+++++|
T Consensus 82 ~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 82 KIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAG 159 (283)
T ss_pred HHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999876 5789999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~ 318 (371)
|+|+|||||++||||++++|+++||+||+|||+++++.+.+++|||||+|||+|++++.+|+++|++|||+|||++++
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~~-- 237 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDG-- 237 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecCC--
Confidence 999999999988999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++|||||+++.+++++||||||||||||++|||+|+++++++.+|
T Consensus 238 -----~~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 238 -----GGVGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred -----CCcccccHHHhhccceEeCCCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999999999999999988764
|
|
| >KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=580.89 Aligned_cols=293 Identities=62% Similarity=0.935 Sum_probs=282.8
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
.+.+++||.+|+.+++++..+++.+++.+|..|+|+.++||+||+|+.|+.+|+|+|+++||.++.+.||+..+++++++
T Consensus 7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~ 86 (309)
T KOG0089|consen 7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES 86 (309)
T ss_pred ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|.++|+|++||||+||+|+|.|++++++++.++|+|||||+|+.|.|+|...++.+.|+||||.||+|+|+++++.+.|
T Consensus 87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G 166 (309)
T KOG0089|consen 87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG 166 (309)
T ss_pred HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence 99999999999999999999999999999999999999999999999999988777889999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccC--------CCeEEEEeCCCCC--HHhhccCCcEEEEccCCCCcccCCCcCCCeEEEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE--------DATVSIVHSRTKN--PEEITRQADIIISAVGQPNMVRGSWIKPGAVIID 308 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~--------gAtVtv~h~~t~~--l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVID 308 (371)
|+++|+|||++||+|+|++|.+. .||||++||.|++ ++.++++|||+|+|+|.|++|+.||||+|+.|||
T Consensus 167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vid 246 (309)
T KOG0089|consen 167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVID 246 (309)
T ss_pred ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEe
Confidence 99999999999999999999998 6899999999965 5899999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 309 VGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 309 vgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+|+|++.++++..++||+||||||++.++|++||||||||||||++|||+|+++++++.+..+
T Consensus 247 vgin~v~dp~~a~~~klvgdvdFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~~~ 309 (309)
T KOG0089|consen 247 VGINRVHDPSTAVGIKLVGDVDFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFLSK 309 (309)
T ss_pred cCCCcccccccceeeEEeeeccHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhccC
Confidence 999999998887788999999999999999999999999999999999999999999877653
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-53 Score=379.81 Aligned_cols=160 Identities=62% Similarity=1.018 Sum_probs=138.9
Q ss_pred CcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhcc
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR 280 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~ 280 (371)
||+|+|+|+.| +++|+||||+||+++|++|+++++||+|+|||||++||+|++++|+++|||||+||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 79999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHH
Q 017438 281 QADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNT 360 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~ 360 (371)
+|||||+|+|+|++|++||||||++|||+|+++... +++++|||||++++++++++|||||||||||++|||+|+
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~~-----~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~~N~ 153 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVPG-----DGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLMKNL 153 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEETT-----TTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCccccc-----cceeeecccHHHhhccceEEeeCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999822 239999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 017438 361 LTSAKRV 367 (371)
Q Consensus 361 v~a~~~~ 367 (371)
+++++++
T Consensus 154 v~a~~~~ 160 (160)
T PF02882_consen 154 VKAAKRQ 160 (160)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999874
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-48 Score=353.83 Aligned_cols=158 Identities=34% Similarity=0.483 Sum_probs=145.1
Q ss_pred cccccCccCcchhhhhccCCC-------ccccccCCHHHHHHHHHHhCC---------CCCCCEEEEEcCCcccHHHHHH
Q 017438 193 MEKDVDGFHPLNIGRLAMRGR-------EPLFIPCTPKGCIELLHRYGF---------DIKGKRAVVIGRSNIVGMPAAL 256 (371)
Q Consensus 193 p~KDVDgl~~~N~G~l~~g~~-------~~~~~PcTa~gvi~lL~~~~i---------~l~GK~vvVIG~s~~VGkpla~ 256 (371)
|+|||||+|+.|+|+|+.|.. .++|+||||+||+++|++|++ +++||+|+|||||++||+|+++
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 789999999999999987631 158999999999999999977 8999999999999999999999
Q ss_pred HhccCCCeEEEE---------------eCCC--CC----HHhhccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecCC
Q 017438 257 LLQREDATVSIV---------------HSRT--KN----PEEITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 257 lL~~~gAtVtv~---------------h~~t--~~----l~~~l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~~ 314 (371)
||+++|||||+| |++| ++ +++++++|||||+|+|+|++ |++||||||++|||+|++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 6776 46 88999999999999999999 9999999999999999873
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
|+| +++.++|+++||| |||||++|||+|+++++++++
T Consensus 160 -------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~ 196 (197)
T cd01079 160 -------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH 196 (197)
T ss_pred -------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence 455 6789999999998 999999999999999998775
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=296.77 Aligned_cols=137 Identities=36% Similarity=0.599 Sum_probs=129.8
Q ss_pred CccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCC
Q 017438 213 REPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 213 ~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p 292 (371)
.++.|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|.++|++|++||++|+++++++++|||||+|+|+|
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 293 NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 293 ~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++|+++|+|||++|||+|+++. +|+++.++++++|||||||||||++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~---------------~~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKL---------------SGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCcc---------------cchhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 9999999999999999998862 14567889999999999999999999999999875
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=303.73 Aligned_cols=168 Identities=64% Similarity=1.041 Sum_probs=157.7
Q ss_pred cccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 193 MEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 193 p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999854 57899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHH
Q 017438 273 KNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 273 ~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T 352 (371)
.++.+.+++|||||+|||+|++|+.+|++++.++||++.+++.+ +.+| |++||+||+.+.+++.++||+||||||+|
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdvd--~~~~-~~~G~~d~~~~~~~~~~~~~~pggvgp~t 155 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVPD--KSGG-KLVGDVDFESAKEKASAITPVPGGVGPMT 155 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCccc--ccCC-CeeCCcCHHHHHhhccCcCCCCCcChHHH
Confidence 99999999999999999999999999999999999999999765 2234 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017438 353 IAMLLSNTLTSAK 365 (371)
Q Consensus 353 ~amLl~n~v~a~~ 365 (371)
+++||+|++++++
T Consensus 156 ~a~l~~n~~~~~~ 168 (168)
T cd01080 156 VAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=244.80 Aligned_cols=117 Identities=56% Similarity=0.905 Sum_probs=103.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++|+||++|++|+++++++++.|+++ |++|+|++|+||+|++|..|+++|.|.|+++||+++.+.||++++++|+++.|
T Consensus 1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i 79 (117)
T PF00763_consen 1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI 79 (117)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence 48999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 198 (371)
++||+|++||||+||+|||+|+++.+++++|+|+||||
T Consensus 80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD 117 (117)
T PF00763_consen 80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD 117 (117)
T ss_dssp HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence 99999999999999999999999999999999999998
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B .... |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=202.54 Aligned_cols=225 Identities=16% Similarity=0.168 Sum_probs=174.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhC
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAV 191 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I 191 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+-+ +++++|.+.++.+.. .++.|++|++|+|. ...++++.+
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~~D~~ 84 (284)
T PRK12549 8 AGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCKQ--AVIPHLDEL 84 (284)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCHH--HHHHHhccC
Confidence 345665433333344667899999999999999632 357889999999875 48999999999997 556788888
Q ss_pred Cc-ccccCccCc-ch-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEE
Q 017438 192 SM-EKDVDGFHP-LN-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSI 267 (371)
Q Consensus 192 ~p-~KDVDgl~~-~N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv 267 (371)
+| .+.+.+++. ++ -|++. |+|+|+ .|+++.|+....++++|+|+|||+|++ |++++..|...|+ +|++
T Consensus 85 ~~~A~~iGAvNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I 156 (284)
T PRK12549 85 SDDARALGAVNTVVFRDGRRI-GHNTDW------SGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTI 156 (284)
T ss_pred CHHHHHhCCceEEEecCCEEE-EEcCCH------HHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEE
Confidence 88 788777733 33 34554 666665 999999998777899999999999997 9999999999997 7999
Q ss_pred EeCCCC----------------------CHHhhccCCcEEEEccCC-----CC-cccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 268 VHSRTK----------------------NPEEITRQADIIISAVGQ-----PN-MVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 268 ~h~~t~----------------------~l~~~l~~ADIVIsAvG~-----p~-~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
++|+.. ++.+.++++|+||++|+. +. .++.++++++.+|+|+.|+|.+|
T Consensus 157 ~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T--- 233 (284)
T PRK12549 157 FDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLET--- 233 (284)
T ss_pred ECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC---
Confidence 998631 223356789999999642 22 26678899999999999999877
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|.. .++..|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 234 ----~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 234 ----ELLR------AARALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred ----HHHH------HHHHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 4554 3566787 4566777 9999999999999985
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=201.50 Aligned_cols=223 Identities=20% Similarity=0.283 Sum_probs=173.3
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+ +.+++|.+.++.++. .++.|++|++|+|. +..++++.++|
T Consensus 12 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~ld~~~~~ 86 (289)
T PRK12548 12 LGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKT-FNMRGANVTMPCKS--EAAKYMDELSPA 86 (289)
T ss_pred EEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHH-CCCCEEEECccCHH--HHHHHhhcCCHH
Confidence 3455654322222345678899999999999996 778899999999986 48999999999987 56778888888
Q ss_pred ccccCccCc-ch-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeC
Q 017438 194 EKDVDGFHP-LN-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHS 270 (371)
Q Consensus 194 ~KDVDgl~~-~N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~ 270 (371)
.+-+..++. ++ -|++. |+|+|+ .|+++.|++++.+++||+++|+|+|++ |++++..|...|++ |++++|
T Consensus 87 A~~iGavNTi~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R 158 (289)
T PRK12548 87 ARIIGAVNTIVNDDGKLT-GHITDG------LGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNI 158 (289)
T ss_pred HHHhCceeEEEeECCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeC
Confidence 777777633 23 35554 666665 999999999988999999999999997 99999999999985 999998
Q ss_pred CC---CC---------------------------HHhhccCCcEEEEccC---CCC----cc-cCCCcCCCeEEEEeeec
Q 017438 271 RT---KN---------------------------PEEITRQADIIISAVG---QPN----MV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 271 ~t---~~---------------------------l~~~l~~ADIVIsAvG---~p~----~v-~~d~ik~gavVIDvgin 312 (371)
+. .. +++.+..+|+||++|+ .|+ .+ +.+++.++.+|+|+.|+
T Consensus 159 ~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 159 KDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred CchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 63 11 1123356799998885 232 24 45789999999999999
Q ss_pred CCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 313 PVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 313 ~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|.+| +|+. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 P~~T-------~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 239 PKKT-------KLLE------DAEAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CCCC-------HHHH------HHHHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 9887 4554 3566787 5677787 9999999999999985
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=201.35 Aligned_cols=221 Identities=19% Similarity=0.216 Sum_probs=171.6
Q ss_pred EeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017438 117 LVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 195 (371)
Q Consensus 117 ~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 195 (371)
++|+.-+--.-=..-+.+++++|+++.|..|+ +++++|.+.++.++.. ++.|++|++|+|. ...++++.+++ .|
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K~--~~~~~~D~l~~~A~ 86 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNKQ--LACEYVDELTPAAK 86 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhccCCHHHH
Confidence 45653322223346688999999999999996 7888999999999764 7999999999987 55778888888 88
Q ss_pred ccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 196 DVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 196 DVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
.+.+++.+ + .|++. |+|+|+ .|+++.|++.+++++||+++|+|+|++ +|+++..|..+|+ .|+|++|+.
T Consensus 87 ~iGAVNTv~~~~g~l~-G~NTD~------~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 87 LVGAINTIVNDDGYLR-GYNTDG------TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HhCceeEEEccCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence 87776433 3 35554 665665 999999999999999999999999998 9999999998896 899999973
Q ss_pred C---C--------------------H------HhhccCCcEEEEccCC---CC----c-ccCCCcCCCeEEEEeeecCCC
Q 017438 273 K---N--------------------P------EEITRQADIIISAVGQ---PN----M-VRGSWIKPGAVIIDVGINPVE 315 (371)
Q Consensus 273 ~---~--------------------l------~~~l~~ADIVIsAvG~---p~----~-v~~d~ik~gavVIDvgin~~~ 315 (371)
. . + .+.+.++|+||++|+. |+ . ++.++++++.+|+|+.|+|.+
T Consensus 159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 238 (288)
T PRK12749 159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM 238 (288)
T ss_pred cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence 1 0 1 1134578999998862 32 1 244568899999999999988
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 316 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| +|.. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 T-------~ll~------~A~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~ 273 (288)
T PRK12749 239 T-------KLLQ------QAQQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK 273 (288)
T ss_pred C-------HHHH------HHHHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence 7 4555 3566787 4556676 9999999999999985
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=196.25 Aligned_cols=225 Identities=14% Similarity=0.163 Sum_probs=174.6
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHH
Q 017438 108 GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSI 187 (371)
Q Consensus 108 g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i 187 (371)
+..++|..=++|+. -|.+-. .-+.+++++|+++.|..|+ .++|.+.++.++.. ++.|++|++|++. ...++
T Consensus 6 ~~~~~~~~gliG~P-~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~~-~~~G~nVT~P~K~--~~~~~ 76 (272)
T PRK12550 6 NKDTQLCISLAARP-SNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRAL-GIRGCAVSMPFKE--AVIPL 76 (272)
T ss_pred CCCceEEEEEEccc-hhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHH
Confidence 34567666677864 555555 7889999999999999995 46788888888763 7999999999997 55778
Q ss_pred HhhCCc-ccccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-
Q 017438 188 LNAVSM-EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA- 263 (371)
Q Consensus 188 ~~~I~p-~KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA- 263 (371)
++.++| .+.+.+++.+ + -|++. |+|+|+ .|+++.|++++.+ .+|+|+|+|+|++ +|+++..|.+.|+
T Consensus 77 lD~l~~~A~~iGAVNTi~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~ 147 (272)
T PRK12550 77 VDELDPSAQAIESVNTIVNTDGHLK-AYNTDY------IAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFT 147 (272)
T ss_pred hhcCCHHHHHhCCeeEEEeeCCEEE-EEecCH------HHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCC
Confidence 888888 7887776332 3 34443 555555 9999999988875 4789999999998 9999999999997
Q ss_pred eEEEEeCCCCCHH-----------hhc--cCCcEEEEccC---CCC------cccCCCcCCCeEEEEeeecCCCCCCCCC
Q 017438 264 TVSIVHSRTKNPE-----------EIT--RQADIIISAVG---QPN------MVRGSWIKPGAVIIDVGINPVEDAKSPR 321 (371)
Q Consensus 264 tVtv~h~~t~~l~-----------~~l--~~ADIVIsAvG---~p~------~v~~d~ik~gavVIDvgin~~~~~~~~~ 321 (371)
+|+|++|+.+..+ +.+ ..+|+||++|+ .++ .++.++++++.+|+|+.|+|.+|
T Consensus 148 ~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T----- 222 (272)
T PRK12550 148 DGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET----- 222 (272)
T ss_pred EEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC-----
Confidence 6999999742211 111 45899999886 221 26678899999999999999887
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 322 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|.. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 223 --~ll~------~A~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 223 --PLIR------YARARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred --HHHH------HHHHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 4554 3566777 4567777 9999999999999985
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-23 Score=197.36 Aligned_cols=208 Identities=19% Similarity=0.288 Sum_probs=167.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-h-hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-IG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~-N-~G 206 (371)
.-+.+++++|+++.|..|. +.+++|.+.++.+... ++.|++|++|++. +..++++.++| .+.+..++.+ + -|
T Consensus 23 ~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~igavNtv~~~~g 97 (278)
T PRK00258 23 IHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFKE--AAFALADELSERARLIGAVNTLVLEDG 97 (278)
T ss_pred HHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCHH--HHHHHhhcCCHHHHHhCCceEEEeeCC
Confidence 4588999999999999995 7788999999999875 7999999999987 56778888888 7887776433 3 34
Q ss_pred hhccCCCccccccCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCCC----------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTKN---------- 274 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~~---------- 274 (371)
++. |+|+++ .|+++.|++ .+.++++|+|+|+|+|++ |+.++..|..+| ++|++++|+...
T Consensus 98 ~l~-G~NTD~------~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~ 169 (278)
T PRK00258 98 RLI-GDNTDG------IGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA 169 (278)
T ss_pred EEE-EEcccH------HHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 443 555555 999999986 578999999999999996 999999999999 699999987321
Q ss_pred ---------HHhhccCCcEEEEccCCCC-------cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhc
Q 017438 275 ---------PEEITRQADIIISAVGQPN-------MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVA 338 (371)
Q Consensus 275 ---------l~~~l~~ADIVIsAvG~p~-------~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a 338 (371)
+.+.+.++||||++|+... .+..++++++.+|+|+.|+|.+| .|.. .+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-------~ll~------~A~~~ 236 (278)
T PRK00258 170 LGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-------PFLA------WAKAQ 236 (278)
T ss_pred ccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-------HHHH------HHHHC
Confidence 1234578999999997421 24557899999999999999876 3443 36677
Q ss_pred ceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 339 SAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 339 ~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 237 G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 237 GA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred cC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 87 5667777 9999999999999985
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-23 Score=198.26 Aligned_cols=209 Identities=20% Similarity=0.333 Sum_probs=169.3
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCcc-Ccchh-
Q 017438 129 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGF-HPLNI- 205 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl-~~~N~- 205 (371)
..-+.+++++|+++.|..|. +..++|.+.|+.+. ++++.|.+|++|+|+ ...++++.+++ ++-+..+ |.++.
T Consensus 23 ~~Hn~~~~~lGl~~~Y~a~~--v~~~~l~~~v~~~~-~~g~~G~NVTiP~Ke--~~~~~lD~l~~~A~~iGAVNTl~~~~ 97 (283)
T COG0169 23 RMHNAAFRALGLDYVYLAFE--VPPEDLPEAVSGIR-ALGFRGLNVTIPFKE--AALPLLDELSPRARLIGAVNTLVRED 97 (283)
T ss_pred HHHHHHHHHcCCCceEEEee--cCHHHHHHHHHHHH-hcCCCeeEECCccHH--HHHHHHhcCCHHHHHhCCceEEEEcc
Confidence 35678999999999999996 67899999999999 579999999999997 56788899998 7777777 44454
Q ss_pred -hhhccCCCccccccCCHHHHHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCC---HH--
Q 017438 206 -GRLAMRGREPLFIPCTPKGCIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---PE-- 276 (371)
Q Consensus 206 -G~l~~g~~~~~~~PcTa~gvi~lL~~~~--i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~---l~-- 276 (371)
|++. |+|+|+ .|+.+.|++++ .+.+|++|+|+|+||+ +|+++..|++.|+ +|+|+||+... |.
T Consensus 98 ~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~ 169 (283)
T COG0169 98 DGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELADL 169 (283)
T ss_pred CCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 5665 777776 99999999987 5777999999999998 9999999999995 79999997421 11
Q ss_pred ----------------hhccCCcEEEEccCC---CC----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhh
Q 017438 277 ----------------EITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEE 333 (371)
Q Consensus 277 ----------------~~l~~ADIVIsAvG~---p~----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~ 333 (371)
+...++|+||++|+. ++ +++.+.++++.+|+|+.|+|.+| +|+-
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------plL~------ 236 (283)
T COG0169 170 FGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET-------PLLR------ 236 (283)
T ss_pred hhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC-------HHHH------
Confidence 111159999999872 22 35567899999999999999988 4554
Q ss_pred hhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 334 ACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 334 v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.++..|+. +-.|.| ||++|.+++|+.|+|+
T Consensus 237 ~A~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 237 EARAQGAK--TIDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred HHHHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 35566765 445677 9999999999999986
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=194.31 Aligned_cols=224 Identities=16% Similarity=0.214 Sum_probs=170.1
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc
Q 017438 114 AVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM 193 (371)
Q Consensus 114 aiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p 193 (371)
-.-.+|+.-+.-.-=..-+.+++++|+++.|+.|+. .+.++|.+.++.+.. ++.|++|++|+|. ...++++.++|
T Consensus 7 ~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~-~~~~~l~~~~~~~~~--~~~G~nVT~P~K~--~~~~~~d~~~~ 81 (282)
T TIGR01809 7 KAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFET-CSAEELKEVLSGFGP--QFGGASVTIPLKF--AILRFADEHTD 81 (282)
T ss_pred EEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeec-CCHHHHHHHHHhcCC--CCcEEEECCCCHH--HHHHHhhcCCH
Confidence 345667533322233456778999999999999962 245789999998843 7999999999997 56778888888
Q ss_pred -ccccCccCcc-h--hhhhccCCCccccccCCHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEE
Q 017438 194 -EKDVDGFHPL-N--IGRLAMRGREPLFIPCTPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVS 266 (371)
Q Consensus 194 -~KDVDgl~~~-N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i--~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVt 266 (371)
.|-+..++.+ + -|++. |+|+|+ .|+++.|++.+. +++||+|+|||+|++ ||+++..|...|+ +|+
T Consensus 82 ~A~~iGAVNTv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~ 153 (282)
T TIGR01809 82 RASLIGSVNTLLRTQNGIWK-GDNTDW------DGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDIT 153 (282)
T ss_pred HHHHhCceeEEEEcCCCcEE-EecCCH------HHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEE
Confidence 8887777433 3 25554 666666 999999998874 689999999999997 9999999999996 799
Q ss_pred EEeCCCC----------------------CHHhhccCCcEEEEccCCCCcccCCC------------cCCCeEEEEeeec
Q 017438 267 IVHSRTK----------------------NPEEITRQADIIISAVGQPNMVRGSW------------IKPGAVIIDVGIN 312 (371)
Q Consensus 267 v~h~~t~----------------------~l~~~l~~ADIVIsAvG~p~~v~~d~------------ik~gavVIDvgin 312 (371)
|++|+.. ++.+.+.++|+||++|+....++.+. ++++.+|+|+.|+
T Consensus 154 I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~ 233 (282)
T TIGR01809 154 VINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYD 233 (282)
T ss_pred EEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeC
Confidence 9998631 11234577899999998643333322 3467899999999
Q ss_pred CCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 313 PVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 313 ~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|.+| .|.. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 234 P~~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 234 PWPT-------PLVA------IVSAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred CCCC-------HHHH------HHHHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 9887 4554 3566787 4556777 9999999999999985
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=195.76 Aligned_cols=211 Identities=14% Similarity=0.145 Sum_probs=168.5
Q ss_pred HHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-
Q 017438 129 RNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL- 203 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~- 203 (371)
..-+.+++++|+++.|..|+-. +++++|.+.++.+... ++.|++|++|+|. ...++++.++| .+.+..++.+
T Consensus 21 ~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~lD~l~~~A~~iGAVNTv~ 97 (283)
T PRK14027 21 AMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYKQ--AVLPLLDEVSEQATQLGAVNTVV 97 (283)
T ss_pred HHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCHH--HHHHHhhhCCHHHHHhCCceEEE
Confidence 4567889999999999999622 3468899999998764 8999999999987 66788899999 8888887543
Q ss_pred h--hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCC---H--
Q 017438 204 N--IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---P-- 275 (371)
Q Consensus 204 N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~---l-- 275 (371)
+ -|++. |+|+|+ .|+++.|++.+.+++||+|+|+|+|++ ||+++..|...|+ +|+|++|+... |
T Consensus 98 ~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~nR~~~ka~~La~ 169 (283)
T PRK14027 98 IDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_pred ECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 3 35554 776776 999999998767889999999999997 9999999999996 79999986311 1
Q ss_pred -------------------HhhccCCcEEEEccCC---CC---cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccc
Q 017438 276 -------------------EEITRQADIIISAVGQ---PN---MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVC 330 (371)
Q Consensus 276 -------------------~~~l~~ADIVIsAvG~---p~---~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd 330 (371)
.+.+.++|+||++|+. ++ .++.++++++.+|+|+.|+|.+| +|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------~ll~--- 239 (283)
T PRK14027 170 VINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET-------ELLK--- 239 (283)
T ss_pred HHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCC-------HHHH---
Confidence 1234568999988862 21 25566788999999999999887 4655
Q ss_pred hhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 331 YEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 331 ~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 240 ---~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~ 269 (283)
T PRK14027 240 ---AARALGC--ETLDGTR-----MAIHQAVDAFRLFTGL 269 (283)
T ss_pred ---HHHHCCC--EEEccHH-----HHHHHHHHHHHHHhCC
Confidence 3666787 4567777 9999999999999985
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-22 Score=190.02 Aligned_cols=209 Identities=20% Similarity=0.231 Sum_probs=165.2
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-h-h
Q 017438 129 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-I 205 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~-N-~ 205 (371)
..-+.+++++|+++.|..|+ +.+++|.+.++.++.. ++.|++|++|++. +..++++.+++ .+-+.+++.+ + -
T Consensus 17 ~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~~gavNti~~~~ 91 (270)
T TIGR00507 17 LIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFKE--EAFQFLDEIDERAKLAGAVNTLKLED 91 (270)
T ss_pred HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhhhCCHHHHHhCCceEEEeeC
Confidence 35678899999999999996 7788899999999874 8999999999987 55788888988 7877776433 3 3
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH---------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------- 276 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--------- 276 (371)
|++. |+|+|+ .|+++.|++.+...++|+++|+|+|++ |++++..|...|+.|++++|+....+
T Consensus 92 g~l~-g~NTD~------~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~ 163 (270)
T TIGR00507 92 GKLV-GYNTDG------IGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQRY 163 (270)
T ss_pred CEEE-EEcCCH------HHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc
Confidence 4443 555554 999999998777788999999999986 99999999999999999988632211
Q ss_pred ---------h-hccCCcEEEEccCC---CC----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc
Q 017438 277 ---------E-ITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS 339 (371)
Q Consensus 277 ---------~-~l~~ADIVIsAvG~---p~----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~ 339 (371)
+ ...++|+||++++. +. .+..++++++.+|+|+.|+|.++ .|. ..++.+|
T Consensus 164 ~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-------~ll------~~A~~~G 230 (270)
T TIGR00507 164 GEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-------PFL------AEAKSLG 230 (270)
T ss_pred CceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-------HHH------HHHHHCC
Confidence 1 22578999999985 22 23456789999999999998766 333 3356677
Q ss_pred eeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 340 AITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 340 ~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+ ++-.|.+ ||++|.+.+++.|+|.
T Consensus 231 ~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 231 T--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred C--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 6 4566777 9999999999999985
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-20 Score=190.92 Aligned_cols=221 Identities=21% Similarity=0.306 Sum_probs=169.6
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+ + +++.+.++.++. +++.|++|++|++. ...++++.++|
T Consensus 255 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v--~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~lD~~~~~ 327 (529)
T PLN02520 255 YGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLL--V--DDLAKFLQTYSS-PDFAGFSCTIPHKE--DALKCCDEVDPI 327 (529)
T ss_pred EEEEcCCcccccCHHHHHHHHHHCCCCcEEEEee--h--hhHHHHHHHHhh-CCCCEEEECcCCHH--HHHHHhccCCHH
Confidence 3467864333333356788999999999999996 3 467788887766 58999999999987 55778888888
Q ss_pred ccccCccCcc-h---hhhhccCCCccccccCCHHHHHHHHHHh----------CCCCCCCEEEEEcCCcccHHHHHHHhc
Q 017438 194 EKDVDGFHPL-N---IGRLAMRGREPLFIPCTPKGCIELLHRY----------GFDIKGKRAVVIGRSNIVGMPAALLLQ 259 (371)
Q Consensus 194 ~KDVDgl~~~-N---~G~l~~g~~~~~~~PcTa~gvi~lL~~~----------~i~l~GK~vvVIG~s~~VGkpla~lL~ 259 (371)
.+.+.+++.+ + -|++. |+|+|+ .|+++.|++. +.+++||+|+|+|+|++ |++++..|.
T Consensus 328 A~~iGAVNTvv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~ 399 (529)
T PLN02520 328 AKSIGAINTIIRRPSDGKLV-GYNTDY------IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAK 399 (529)
T ss_pred HHHhCCceEEEEeCCCCEEE-EEcccH------HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHH
Confidence 8888887443 3 35554 666666 9999999852 56789999999999996 999999999
Q ss_pred cCCCeEEEEeCCCCCHH-----------------hh-ccCCcEEEEccC---CCC----cccCCCcCCCeEEEEeeecCC
Q 017438 260 REDATVSIVHSRTKNPE-----------------EI-TRQADIIISAVG---QPN----MVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 260 ~~gAtVtv~h~~t~~l~-----------------~~-l~~ADIVIsAvG---~p~----~v~~d~ik~gavVIDvgin~~ 314 (371)
++|++|++++|+.+..+ +. ...+||||++++ .|+ .++.++++++.+|+|+.|+|.
T Consensus 400 ~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~ 479 (529)
T PLN02520 400 EKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPK 479 (529)
T ss_pred HCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCC
Confidence 99999999988632111 11 135789997775 232 256678999999999999998
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+| .|+. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 480 ~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 515 (529)
T PLN02520 480 IT-------RLLR------EAEESGA--IIVSGTE-----MFIRQAYEQFERFTGL 515 (529)
T ss_pred cC-------HHHH------HHHHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence 87 4554 3566787 4566776 9999999999999985
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-20 Score=188.90 Aligned_cols=221 Identities=18% Similarity=0.231 Sum_probs=170.0
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-.+|+.-+--.-=..-+.+++++|+++.|..|+ +.++++.+.++.+.. +++.|++|++|++. ....+++.++|
T Consensus 218 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~~d~~~~~ 292 (477)
T PRK09310 218 YGLIGDPVDRSISHLSHNPLFSQLSLNCPYIKLP--LTPQELPKFFSTIRD-LPFLGLSVTMPLKT--AVLDFLDKLDPS 292 (477)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHh-CCCCEEEECccCHH--HHHHHhccCCHH
Confidence 3467764333333346788999999999999996 777889888888876 47999999999987 55778888888
Q ss_pred ccccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 194 EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 194 ~KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+-+.+++.+ + -|++. |+|+|+ .|+++.|++.+.+++||+++|+|+|++ |++++..|.+.|++|++++++
T Consensus 293 A~~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~ 364 (477)
T PRK09310 293 VKLCGSCNTLVFRNGKIE-GYNTDG------EGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRT 364 (477)
T ss_pred HHHhCcceEEEeeCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCC
Confidence 8888777443 3 35554 666666 999999999999999999999999986 999999999999999999886
Q ss_pred CCCHH--------------h--hccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhh
Q 017438 272 TKNPE--------------E--ITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC 335 (371)
Q Consensus 272 t~~l~--------------~--~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~ 335 (371)
....+ + .+.++|+||++++..-.+. +.+. .+|+|+.|+|.++ .|. ..+
T Consensus 365 ~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~-~~l~--~~v~D~~Y~P~~T-------~ll------~~A 428 (477)
T PRK09310 365 KAHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIP-KAFP--PCVVDINTLPKHS-------PYT------QYA 428 (477)
T ss_pred HHHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcch-hHHh--hhEEeccCCCCCC-------HHH------HHH
Confidence 32211 1 1467899999997533333 2333 3899999999876 343 335
Q ss_pred hhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 336 EVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 336 ~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+..|+ ++-+|.+ ||++|.+++++.|+|.+
T Consensus 429 ~~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~~ 457 (477)
T PRK09310 429 RSQGS--SIIYGYE-----MFAEQALLQFRLWFPTL 457 (477)
T ss_pred HHCcC--EEECcHH-----HHHHHHHHHHHHHcCCc
Confidence 66777 4556777 99999999999999863
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.9e-15 Score=144.19 Aligned_cols=131 Identities=26% Similarity=0.364 Sum_probs=106.1
Q ss_pred CCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCC
Q 017438 220 CTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 282 (371)
Q Consensus 220 cTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~A 282 (371)
.|+.+ +.+.++++++++.|++|+|||.|.+ |++++..|.+.|++|++++++.. ++.+.++++
T Consensus 133 ~~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~a 211 (296)
T PRK08306 133 PTAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKI 211 (296)
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCC
Confidence 34455 6677888899999999999999985 99999999999999999998742 456788999
Q ss_pred cEEEEccCCCCcccCC---CcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHH
Q 017438 283 DIIISAVGQPNMVRGS---WIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 283 DIVIsAvG~p~~v~~d---~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amL 356 (371)
|+||++++. .+++.+ ++++|++|||+++++ |++||+.+.+. +-+.+++||+|+|+|++.+
T Consensus 212 DiVI~t~p~-~~i~~~~l~~~~~g~vIIDla~~p-------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~~~ 277 (296)
T PRK08306 212 DIIFNTIPA-LVLTKEVLSKMPPEALIIDLASKP-------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAGQI 277 (296)
T ss_pred CEEEECCCh-hhhhHHHHHcCCCCcEEEEEccCC-------------CCcCeeehhhCCeEEEEECCCCccCCHHHHHHH
Confidence 999999864 345555 469999999999875 35677554443 4556899999999999999
Q ss_pred HHHHHHHHH
Q 017438 357 LSNTLTSAK 365 (371)
Q Consensus 357 l~n~v~a~~ 365 (371)
+.|.+..+-
T Consensus 278 ~~~~i~~~l 286 (296)
T PRK08306 278 LANVLSQLL 286 (296)
T ss_pred HHHHHHHHH
Confidence 999987763
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-13 Score=134.52 Aligned_cols=128 Identities=27% Similarity=0.411 Sum_probs=101.8
Q ss_pred CCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCC
Q 017438 220 CTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 282 (371)
Q Consensus 220 cTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~A 282 (371)
+|+++ +...++.++++++||+++|+|.|++ |+.++..|...|++|++++|+.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 55665 5556677889999999999999995 99999999999999999998642 345678999
Q ss_pred cEEEEccCCCCcccC---CCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc---eecc-CCCCccHHHHHH
Q 017438 283 DIIISAVGQPNMVRG---SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS---AITP-VPGGVGPMTIAM 355 (371)
Q Consensus 283 DIVIsAvG~p~~v~~---d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~---~iTP-VPGGVGp~T~am 355 (371)
|+||++++.+ +++. +.+++++++||++++| |.+||+. +++.| ...| .||.|+|.|++.
T Consensus 211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P-------------g~tdf~~-Ak~~G~~a~~~~glPg~~ap~ta~~ 275 (287)
T TIGR02853 211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP-------------GGTDFEY-AKKRGIKALLAPGLPGIVAPKTAGK 275 (287)
T ss_pred CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC-------------CCCCHHH-HHHCCCEEEEeCCCCcccCchhHHH
Confidence 9999998653 4444 3578999999999876 4567744 44443 2335 899999999999
Q ss_pred HHHHHHHH
Q 017438 356 LLSNTLTS 363 (371)
Q Consensus 356 Ll~n~v~a 363 (371)
++.|++..
T Consensus 276 i~~~~~~~ 283 (287)
T TIGR02853 276 ILANVLSE 283 (287)
T ss_pred HHHHHHHH
Confidence 99999865
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.5e-10 Score=97.73 Aligned_cols=127 Identities=25% Similarity=0.383 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC-------------------CHHhhccC
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-------------------NPEEITRQ 281 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~-------------------~l~~~l~~ 281 (371)
..|+.+.+++.++++++++++|+|.|++ |+.++..|.+.| ..|++++++.. +..+.+.+
T Consensus 3 ~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (155)
T cd01065 3 GLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAE 81 (155)
T ss_pred HHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhcccc
Confidence 4799999999999999999999999875 999999999886 78999977531 23344688
Q ss_pred CcEEEEccCCCCc------ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHH
Q 017438 282 ADIIISAVGQPNM------VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAM 355 (371)
Q Consensus 282 ADIVIsAvG~p~~------v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~am 355 (371)
+|+||++++.... +....+++|.+|+|+++.+..+ .+.+..+..+. .=++| . .|
T Consensus 82 ~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-------------~l~~~~~~~g~-~~v~g-~-----~~ 141 (155)
T cd01065 82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-------------PLLKEARALGA-KTIDG-L-----EM 141 (155)
T ss_pred CCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-------------HHHHHHHHCCC-ceeCC-H-----HH
Confidence 9999999985432 2334468999999999876422 22233444554 22454 4 49
Q ss_pred HHHHHHHHHHHHhc
Q 017438 356 LLSNTLTSAKRVHN 369 (371)
Q Consensus 356 Ll~n~v~a~~~~~~ 369 (371)
|+.|.+++++.|+|
T Consensus 142 ~~~q~~~~~~~~~~ 155 (155)
T cd01065 142 LVYQAAEAFELWTG 155 (155)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999986
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-11 Score=105.19 Aligned_cols=88 Identities=28% Similarity=0.363 Sum_probs=70.1
Q ss_pred HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC--------------------CCHHhhccCCcEEE
Q 017438 228 LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT--------------------KNPEEITRQADIII 286 (371)
Q Consensus 228 lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t--------------------~~l~~~l~~ADIVI 286 (371)
+.++...+++||+++|||+|++ |+.++..|..+|++ |++++|+. .++.+.+.++||||
T Consensus 2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI 80 (135)
T ss_dssp HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence 4444555899999999999997 99999999999986 99999972 24456788999999
Q ss_pred EccCCCCc-ccCCCcCCC----eEEEEeeecCCCC
Q 017438 287 SAVGQPNM-VRGSWIKPG----AVIIDVGINPVED 316 (371)
Q Consensus 287 sAvG~p~~-v~~d~ik~g----avVIDvgin~~~~ 316 (371)
++|+.+.. ++.+++++. .+|+|+++++.-+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~ 115 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVPRDID 115 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB-
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccCCCCC
Confidence 99998765 788999887 4999999876543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-10 Score=91.57 Aligned_cols=78 Identities=35% Similarity=0.501 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHhC----CCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCc
Q 017438 220 CTPKGCIELLHRYG----FDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTKNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 220 cTa~gvi~lL~~~~----i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
||+.++++.|++.. .++++|+++|+|+|.+ |++++.+|.+. +.+|+++++ |++|+++|.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 78999999888764 4599999999999775 99999999998 578999977 999999999999
Q ss_pred ccC---CCcCCCeEEEEee
Q 017438 295 VRG---SWIKPGAVIIDVG 310 (371)
Q Consensus 295 v~~---d~ik~gavVIDvg 310 (371)
+.+ .+++++.+|+|+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 876 7889999999973
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.2e-10 Score=117.42 Aligned_cols=116 Identities=22% Similarity=0.247 Sum_probs=88.5
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEccCCCC
Q 017438 227 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 227 ~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+++..+..+.||+|+|+|.|. +|+.+|..|...|++|+++++. ..++.+.++.|||||+++|.++
T Consensus 243 ~~~R~~~~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 243 GIFRATDVMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred HHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccc
Confidence 3445568899999999999998 5999999999999999999765 2357788999999999999999
Q ss_pred cccCCCc---CCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC
Q 017438 294 MVRGSWI---KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG 346 (371)
Q Consensus 294 ~v~~d~i---k~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG 346 (371)
+|+.+++ |+|+++|++|....+..- .+-+..+|+|..++.+....+| .|.
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i--~aL~~~~~vdv~evep~v~~~~-~~~ 374 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQV--AELEAYPGIEIVEIKPQVDRYT-FPD 374 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhH--HHHHhcCCceeecccCCCCeEE-eCC
Confidence 9987766 999999999987422100 0112345777666666655555 453
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.4e-10 Score=99.66 Aligned_cols=91 Identities=30% Similarity=0.444 Sum_probs=65.7
Q ss_pred HHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEc
Q 017438 223 KGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~lL~-~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsA 288 (371)
+.+++-+. ..+..+.||+++|+|.|. |||.+|..|...||.|+|+... +..+++.++++||+|++
T Consensus 7 ~S~~d~i~r~t~~~l~Gk~vvV~GYG~-vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vta 85 (162)
T PF00670_consen 7 QSLVDGIMRATNLMLAGKRVVVIGYGK-VGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTA 85 (162)
T ss_dssp HHHHHHHHHHH-S--TTSEEEEE--SH-HHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-
T ss_pred hhHHHHHHhcCceeeCCCEEEEeCCCc-ccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEEC
Confidence 34444443 568999999999999999 5999999999999999999765 24678999999999999
Q ss_pred cCCCCcccCCC---cCCCeEEEEeeecCC
Q 017438 289 VGQPNMVRGSW---IKPGAVIIDVGINPV 314 (371)
Q Consensus 289 vG~p~~v~~d~---ik~gavVIDvgin~~ 314 (371)
||..+.++.++ +|+|++|.++|.-..
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 99988888765 599999999996543
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.1e-10 Score=112.66 Aligned_cols=157 Identities=20% Similarity=0.321 Sum_probs=116.4
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++..++..-.-..=.|-. . .+-..-...+|.-.|-|-.-|..|.|.+..
T Consensus 100 AsGLDSmV------lGE~QILGQVK~Ay~~a~~~g~~-----g-~~L~~lFqkAi~~gKrvRseT~I~~~~VSi------ 161 (414)
T COG0373 100 ASGLDSLV------LGETQILGQVKDAYAKAQENGTL-----G-KVLNRLFQKAISVGKRVRSETGIGKGAVSI------ 161 (414)
T ss_pred hccchhhh------cCcHHHHHHHHHHHHHHHHcCCc-----h-HHHHHHHHHHHHHHHHhhcccCCCCCccch------
Confidence 45777653 46677777776553321111111 1 112244566787788877767666555432
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-----------------CCHHhh
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEI 278 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-----------------~~l~~~ 278 (371)
+.+.+++.++...+|++|+|+|||+|.+ |.-+|..|.++| ..|+|+||+- .++.++
T Consensus 162 -----~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~ 235 (414)
T COG0373 162 -----SSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235 (414)
T ss_pred -----HHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHh
Confidence 3789999999999999999999999997 999999999999 5899999972 467789
Q ss_pred ccCCcEEEEccCCCCc-ccCCCcCCC------eEEEEeeecCCCCC
Q 017438 279 TRQADIIISAVGQPNM-VRGSWIKPG------AVIIDVGINPVEDA 317 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~-v~~d~ik~g------avVIDvgin~~~~~ 317 (371)
+.++||||++||.|++ |+.+++... .++||++.+|+-++
T Consensus 236 l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~ 281 (414)
T COG0373 236 LAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEP 281 (414)
T ss_pred hhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence 9999999999999997 687776443 69999999997554
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.4e-09 Score=105.62 Aligned_cols=157 Identities=17% Similarity=0.200 Sum_probs=109.4
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++.++++.-+...=.|.. ..+-..-+..++.-.|.|---|..+.|..
T Consensus 103 asGLdSmV------lGE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~v-------- 162 (414)
T PRK13940 103 ACGLESMV------LGEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPV-------- 162 (414)
T ss_pred Hhccchhh------cCcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCc--------
Confidence 45777653 46777777776654321111111 01112344556666777654443333222
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC------------------CCHHh
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT------------------KNPEE 277 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t------------------~~l~~ 277 (371)
.-+.+.+++.++...++.||+|+|||+|++ |+.++..|..+|+ .+++++|+. .++.+
T Consensus 163 ---Sv~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~ 238 (414)
T PRK13940 163 ---SVAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ 238 (414)
T ss_pred ---CHHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH
Confidence 234677899988877899999999999997 9999999999995 799999872 23456
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC-CeEEEEeeecCCCCC
Q 017438 278 ITRQADIIISAVGQPNM-VRGSWIKP-GAVIIDVGINPVEDA 317 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~-v~~d~ik~-gavVIDvgin~~~~~ 317 (371)
.+.+||+||+||+.|++ |+.++++. ..++||++.+++-+|
T Consensus 239 ~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdidp 280 (414)
T PRK13940 239 LIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDP 280 (414)
T ss_pred HhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCCCc
Confidence 78999999999999997 68777753 479999999998664
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.9e-08 Score=87.29 Aligned_cols=96 Identities=33% Similarity=0.389 Sum_probs=71.8
Q ss_pred CHHHHHH----HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------
Q 017438 221 TPKGCIE----LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------- 273 (371)
Q Consensus 221 Ta~gvi~----lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------- 273 (371)
|+.+.++ .|++++.++++++++|+|+.+.+|+.++..|.+.|+.|+++.|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 4455444 4455678999999999997444699999999999999999877521
Q ss_pred ---CHHhhccCCcEEEEccCCCC--cccCC-CcCCCeEEEEeeecCCCC
Q 017438 274 ---NPEEITRQADIIISAVGQPN--MVRGS-WIKPGAVIIDVGINPVED 316 (371)
Q Consensus 274 ---~l~~~l~~ADIVIsAvG~p~--~v~~d-~ik~gavVIDvgin~~~~ 316 (371)
++.+.++++|+||++++.+. ....+ ..+++.+|+|+.++|..+
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCC
Confidence 12356788999999998766 33333 345689999999998755
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-08 Score=93.56 Aligned_cols=93 Identities=27% Similarity=0.429 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe---EEEEeCC----CC--------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT---VSIVHSR----TK-------------------- 273 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt---Vtv~h~~----t~-------------------- 273 (371)
+-.|++..++..+.++++++++|+|+|++ |+.++.+|...|++ |++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 45789999999999999999999999997 99999999999975 9999987 11
Q ss_pred ---CHHhhccCCcEEEEccCCCCcccCCCcC---CCeEEEEeeecCCCC
Q 017438 274 ---NPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVGINPVED 316 (371)
Q Consensus 274 ---~l~~~l~~ADIVIsAvG~p~~v~~d~ik---~gavVIDvgin~~~~ 316 (371)
++.+.++++|+||++++ ++++++++++ ++.+|+|+. ||.++
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~e 133 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVPE 133 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCCc
Confidence 24456677999999999 8888888876 889999987 88654
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=94.78 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=76.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC-C-CeEEEEeCCCC---------------CHHhhccCCcEE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSRTK---------------NPEEITRQADII 285 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-g-AtVtv~h~~t~---------------~l~~~l~~ADIV 285 (371)
.++....+..+.+++||+|+|+|++|.+|+.++..|..+ | ..+++++|+.. ++.+.+.++|+|
T Consensus 140 ~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiV 219 (340)
T PRK14982 140 RQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIV 219 (340)
T ss_pred HHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEE
Confidence 345555556778999999999999877899999999754 5 48999988631 233677899999
Q ss_pred EEccCCCCc--ccCCCcCCCeEEEEeeecCCCCC
Q 017438 286 ISAVGQPNM--VRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 286 IsAvG~p~~--v~~d~ik~gavVIDvgin~~~~~ 317 (371)
|++++.|+. +++++++++.++||++.+++-++
T Consensus 220 v~~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~ 253 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKPCLMIDGGYPKNLDT 253 (340)
T ss_pred EECCcCCcCCcCCHHHhCCCeEEEEecCCCCCCc
Confidence 999998765 78899999999999999987554
|
|
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.1e-08 Score=96.03 Aligned_cols=168 Identities=14% Similarity=0.086 Sum_probs=106.6
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++..+++.-....=+|-. ...-..-+..++.-.|.|---|..+.|.+
T Consensus 97 asGLDSmV------lGE~QIlGQVK~Ay~~A~~~g~~------g~~L~~lf~~A~~~aKrVRteT~I~~~~v-------- 156 (338)
T PRK00676 97 TSGMDSLI------LGETEIQGQVKRAYLKAARERKL------PFALHFLFQKALKEGKVFRSKGGAPYAEV-------- 156 (338)
T ss_pred hcccchhh------cCcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCc--------
Confidence 46777754 46677777776654321111110 01112344556666777654443332221
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-----CCHH----hhccCCcEEE
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----KNPE----EITRQADIII 286 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-----~~l~----~~l~~ADIVI 286 (371)
.-+.+++++++.. -+++||+|+|||+|++ |+.++..|.++|+ .|+++||+. .++. ++..++||||
T Consensus 157 ---Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVI 231 (338)
T PRK00676 157 ---TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIF 231 (338)
T ss_pred ---CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEE
Confidence 1234567777665 5799999999999997 9999999999995 799999983 2222 4577999999
Q ss_pred Ec---cCCCCc-ccCCCcCCC--eEEEEeeecCCCCC-CCCCCceeecccc
Q 017438 287 SA---VGQPNM-VRGSWIKPG--AVIIDVGINPVEDA-KSPRGYRLVGDVC 330 (371)
Q Consensus 287 sA---vG~p~~-v~~d~ik~g--avVIDvgin~~~~~-~~~~g~kl~GDVd 330 (371)
++ |+.|+. ++.+++++. -++||++.+++-++ ....+..++ |+|
T Consensus 232 s~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly-~iD 281 (338)
T PRK00676 232 FGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL-DMD 281 (338)
T ss_pred EcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE-EhH
Confidence 97 677876 566666432 48999999997654 222333443 555
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=9.6e-08 Score=98.18 Aligned_cols=94 Identities=24% Similarity=0.332 Sum_probs=79.6
Q ss_pred cCCHHHHHHHHHHh-CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcE
Q 017438 219 PCTPKGCIELLHRY-GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADI 284 (371)
Q Consensus 219 PcTa~gvi~lL~~~-~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADI 284 (371)
-+|.++++.-+++. ++.+.||+|+|+|.|.+ |+.++..|...|++|+++++.. .++++.++.+|+
T Consensus 192 ~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDV 270 (425)
T PRK05476 192 YGTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDI 270 (425)
T ss_pred HHHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCE
Confidence 35788888877776 88899999999999985 9999999999999999997642 246777889999
Q ss_pred EEEccCCCCcccCC---CcCCCeEEEEeeecC
Q 017438 285 IISAVGQPNMVRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 285 VIsAvG~p~~v~~d---~ik~gavVIDvgin~ 313 (371)
||+++|.++.++.+ .+|+|++++++|...
T Consensus 271 VI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 271 FVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred EEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 99999998888754 469999999999754
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.4e-07 Score=92.21 Aligned_cols=93 Identities=28% Similarity=0.371 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEE
Q 017438 220 CTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADII 285 (371)
Q Consensus 220 cTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIV 285 (371)
+|.+.+++.+.+ .++.+.||+|+|+|.|.+ |+.+++.|...|+.|+++.+.. .++++.++++|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 456666665555 478899999999999995 9999999999999999986542 2456778999999
Q ss_pred EEccCCCCcccC---CCcCCCeEEEEeeecC
Q 017438 286 ISAVGQPNMVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 286 IsAvG~p~~v~~---d~ik~gavVIDvgin~ 313 (371)
|+++|.++.++. ..+|+|++++.+|...
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 999999988876 4579999999999754
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.1e-07 Score=95.75 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------CCHHh
Q 017438 221 TPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEE 277 (371)
Q Consensus 221 Ta~gvi~lL~~~~i--~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~~l~~ 277 (371)
-+.+.+++.++..- ++.+++|+|||+|++ |+.++..|...|+ .|++++++. .++.+
T Consensus 247 v~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~ 325 (519)
T PLN00203 247 VSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA 325 (519)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH
Confidence 34577888887644 499999999999886 9999999999996 799998862 13446
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC----------CeEEEEeeecCCCCC
Q 017438 278 ITRQADIIISAVGQPNM-VRGSWIKP----------GAVIIDVGINPVEDA 317 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~-v~~d~ik~----------gavVIDvgin~~~~~ 317 (371)
.+.++|+||++|+.++. ++++|+++ ..++||++.+++-+|
T Consensus 326 al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp 376 (519)
T PLN00203 326 CAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGA 376 (519)
T ss_pred HHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCcc
Confidence 67899999999998775 78888643 259999999997554
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.5e-07 Score=89.96 Aligned_cols=123 Identities=29% Similarity=0.377 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHhhccCCcEEEEccC---C
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVG---Q 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG---~ 291 (371)
+.+++|+|+|+|.+ |+.++..|...|++|++++++. .++.+.++++|+||++++ .
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57889999999875 9999999999999999998641 134567889999999984 2
Q ss_pred --CCcccCCC---cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017438 292 --PNMVRGSW---IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 292 --p~~v~~d~---ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
|.+++.++ +++|.+|||+++.+--. -. ..+ .+..|++.+.. ..-.+.-.||-+ |.|...++.|.+..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~GG~--~e-~~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~l~~ 318 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQGGC--VE-TSR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNATMP 318 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCCCC--cc-CCc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHHHHH
Confidence 55677765 48899999999876311 00 001 22222211111 122345678888 99999998888755
Q ss_pred H
Q 017438 364 A 364 (371)
Q Consensus 364 ~ 364 (371)
+
T Consensus 319 ~ 319 (370)
T TIGR00518 319 Y 319 (370)
T ss_pred H
Confidence 4
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=5e-07 Score=92.55 Aligned_cols=94 Identities=21% Similarity=0.374 Sum_probs=73.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC-----------------CHHhhccCCcE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK-----------------NPEEITRQADI 284 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~-----------------~l~~~l~~ADI 284 (371)
...+++.+....++.|++|+|||+|.+ |+.++..|...|+ .|++++++.. ++.+.+.++|+
T Consensus 167 ~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 245 (423)
T PRK00045 167 SAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADI 245 (423)
T ss_pred HHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCE
Confidence 445566655444789999999999886 9999999999997 7999988631 23356788999
Q ss_pred EEEccCCCCc-ccCCCcCC--------CeEEEEeeecCCCCC
Q 017438 285 IISAVGQPNM-VRGSWIKP--------GAVIIDVGINPVEDA 317 (371)
Q Consensus 285 VIsAvG~p~~-v~~d~ik~--------gavVIDvgin~~~~~ 317 (371)
||++||.|+. ++.+|+++ +.++||++.++.-++
T Consensus 246 VI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 246 VISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred EEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCCcc
Confidence 9999998875 78888844 479999998776553
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.7e-07 Score=92.68 Aligned_cols=95 Identities=29% Similarity=0.404 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC-----------------CHHhhccCCc
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-----------------NPEEITRQAD 283 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~-----------------~l~~~l~~AD 283 (371)
+.+.+++.++...++.|++|+|+|+|.+ |+.++..|...| ..|++++++.. ++.+.+.++|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 3455666666655799999999999886 999999999999 68999987631 3445678999
Q ss_pred EEEEccCCCCc-ccCCCcCC-------CeEEEEeeecCCCCC
Q 017438 284 IIISAVGQPNM-VRGSWIKP-------GAVIIDVGINPVEDA 317 (371)
Q Consensus 284 IVIsAvG~p~~-v~~d~ik~-------gavVIDvgin~~~~~ 317 (371)
+||++||.|+. ++.+|+++ ..++||++.++.-++
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 99999998875 78888753 359999998775443
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-06 Score=87.24 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=73.2
Q ss_pred HHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEc
Q 017438 223 KGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~lL~-~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsA 288 (371)
++.+.-+. ..++-+.||++||.|.|. |||..|+.|...||.|.|..-.. ..+++..+.+||+||+
T Consensus 193 qS~~DgI~RaTn~liaGK~vVV~GYG~-vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~ 271 (420)
T COG0499 193 QSLLDGILRATNVLLAGKNVVVAGYGW-VGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTA 271 (420)
T ss_pred hhHHHHHHhhhceeecCceEEEecccc-cchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEc
Confidence 44444333 478889999999999999 69999999999999999986542 2466888999999999
Q ss_pred cCCCCcccCCCc---CCCeEEEEeee
Q 017438 289 VGQPNMVRGSWI---KPGAVIIDVGI 311 (371)
Q Consensus 289 vG~p~~v~~d~i---k~gavVIDvgi 311 (371)
||.-+.|+.+++ |+|++|.++|.
T Consensus 272 TGnkdVi~~eh~~~MkDgaIl~N~GH 297 (420)
T COG0499 272 TGNKDVIRKEHFEKMKDGAILANAGH 297 (420)
T ss_pred cCCcCccCHHHHHhccCCeEEecccc
Confidence 999999988764 88999999994
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-06 Score=79.39 Aligned_cols=81 Identities=27% Similarity=0.407 Sum_probs=64.9
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccC-CC---C
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVG-QP---N 293 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG-~p---~ 293 (371)
..+.++.||+|.|||.|.+ |+.+|.+|...|++|+.++++. .++++.+++||+|+...+ .| +
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence 3467899999999999996 9999999999999999998763 467889999999998887 33 4
Q ss_pred cccCCC---cCCCeEEEEeeec
Q 017438 294 MVRGSW---IKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~---ik~gavVIDvgin 312 (371)
+|+.+. +|+|+++|+++--
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSG
T ss_pred eeeeeeeeccccceEEEeccch
Confidence 677654 5999999999843
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-06 Score=88.31 Aligned_cols=92 Identities=25% Similarity=0.399 Sum_probs=74.5
Q ss_pred CHHHHH-HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEE
Q 017438 221 TPKGCI-ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 286 (371)
Q Consensus 221 Ta~gvi-~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVI 286 (371)
|-++++ .+++..++.+.|++|+|+|.|.+ |+.++..+...|++|+++.... .++++.++.+|+||
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI 262 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFV 262 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEE
Confidence 444444 45555688899999999999985 9999999999999999986542 24567788999999
Q ss_pred EccCCCCcccC---CCcCCCeEEEEeeecC
Q 017438 287 SAVGQPNMVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 287 sAvG~p~~v~~---d~ik~gavVIDvgin~ 313 (371)
.++|.++.+.. +++++|.+++.+|...
T Consensus 263 ~atG~~~~i~~~~l~~mk~GgilvnvG~~~ 292 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDGAIVCNIGHFD 292 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 99999887754 4679999999999653
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-06 Score=89.86 Aligned_cols=90 Identities=22% Similarity=0.342 Sum_probs=73.7
Q ss_pred CHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEE
Q 017438 221 TPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 286 (371)
Q Consensus 221 Ta~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVI 286 (371)
|-+.+++.+.+ .++.+.||+|+|+|.|.+ |+.+|+.+...|++|+++.+.. .++.+.++++||||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 44555555544 478899999999999985 9999999999999999986543 13567789999999
Q ss_pred EccCCCCcccC---CCcCCCeEEEEeee
Q 017438 287 SAVGQPNMVRG---SWIKPGAVIIDVGI 311 (371)
Q Consensus 287 sAvG~p~~v~~---d~ik~gavVIDvgi 311 (371)
+++|..+++.. +++|+|++++.+|.
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 99999888744 46799999999997
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.3e-06 Score=85.83 Aligned_cols=133 Identities=22% Similarity=0.284 Sum_probs=88.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------------CCHHhhccCCcEEEEc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------------~~l~~~l~~ADIVIsA 288 (371)
.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4799999999999996 9999999999999999987641 2577889999999999
Q ss_pred cCC----CCcccCC---CcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccchhh-------h-hhhcceeccCC
Q 017438 289 VGQ----PNMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCYEE-------A-CEVASAITPVP 345 (371)
Q Consensus 289 vG~----p~~v~~d---~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~~~-------v-~~~a~~iTPVP 345 (371)
++. .++|+.+ .+|+|+++|++|--.+-+... ..| ++.| ||-..+ . .--.-.+||=-
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g-~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPHi 312 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESG-HLGGLAIDVAWSEPFDPDDPILKHPNVIITPHV 312 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcC-CeeEEEEccCCCCCCCCCChhhcCCCEEECCcC
Confidence 873 3467665 459999999998544321000 011 3433 552111 0 11133678877
Q ss_pred CCccHHHHHHHHHHHHHHHHHHh
Q 017438 346 GGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 346 GGVGp~T~amLl~n~v~a~~~~~ 368 (371)
||.-.-+..-+...+++..++|.
T Consensus 313 a~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 313 AGVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CCChHHHHHHHHHHHHHHHHHHH
Confidence 77655554445555555555554
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.9e-06 Score=82.67 Aligned_cols=93 Identities=27% Similarity=0.396 Sum_probs=69.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-----------------CCHHhhccCCcE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEITRQADI 284 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-----------------~~l~~~l~~ADI 284 (371)
...+++.+...-++.|++|+|||.|.+ |+.++..|...| ..|++++++. .++.+.+.++|+
T Consensus 163 ~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 241 (311)
T cd05213 163 SAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADV 241 (311)
T ss_pred HHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCE
Confidence 445666666545589999999999886 999999998877 4799998762 124566788999
Q ss_pred EEEccCCCCc---ccC---CCcCCCeEEEEeeecCCCC
Q 017438 285 IISAVGQPNM---VRG---SWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 285 VIsAvG~p~~---v~~---d~ik~gavVIDvgin~~~~ 316 (371)
||++||.|+. +.. .+-+++.++||++.++.-+
T Consensus 242 Vi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 242 VISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred EEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence 9999998876 221 1223578999999776544
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.6e-06 Score=85.75 Aligned_cols=77 Identities=36% Similarity=0.538 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------CCCHHhhccCCcEEEEccC----
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------TKNPEEITRQADIIISAVG---- 290 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG---- 290 (371)
+...+|+|||.|- ||...|+++...||+|||...+ ..++++.+++||+||.|+=
T Consensus 166 V~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 4556899999865 6999999999999999999754 1368899999999998873
Q ss_pred -CCCcccCCCc---CCCeEEEEeeecC
Q 017438 291 -QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 291 -~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
.|.+++.+|+ |||+++|||.++.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDq 271 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQ 271 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcC
Confidence 4678888865 8999999999985
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.2e-05 Score=82.67 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=70.9
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------C---
Q 017438 223 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N--- 274 (371)
Q Consensus 223 ~gvi~lL~~~~i----------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~--- 274 (371)
.|+++..++++- .+.+.+|+|+|+|.+ |...+..+...|+.|+++..+.. +
T Consensus 139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e 217 (511)
T TIGR00561 139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 217 (511)
T ss_pred HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 677777776653 245689999999885 99999999999999999865420 0
Q ss_pred -----------------------HHhhccCCcEEEEcc---C--CCCcccCCCc---CCCeEEEEeeecC
Q 017438 275 -----------------------PEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 275 -----------------------l~~~l~~ADIVIsAv---G--~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+.++++++||||+++ | .|.+++.+++ |+|++|||++..+
T Consensus 218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 345678999999999 5 4667888775 8999999999864
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=1e-05 Score=82.37 Aligned_cols=143 Identities=20% Similarity=0.237 Sum_probs=94.2
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P--- 292 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p--- 292 (371)
+.+.++.+.++.||++.|||.|.+ |+.++..|...|++|..++... .++++.+++||+|+..++- +
T Consensus 104 L~l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~ 182 (381)
T PRK00257 104 LTLAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGE 182 (381)
T ss_pred HHHhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCcc
Confidence 334456678999999999999995 9999999999999999986421 3678889999999988872 2
Q ss_pred ----CcccCC---CcCCCeEEEEeeecCCCCCCC-----CCC--ceeecccchh------hhhhhcceeccCCCCccHHH
Q 017438 293 ----NMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRG--YRLVGDVCYE------EACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 293 ----~~v~~d---~ik~gavVIDvgin~~~~~~~-----~~g--~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T 352 (371)
++++.+ .+|+|+++|+++--.+-+... ..| ....=||=.. ...+..-.+||=-+|.-.=+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~aRG~vVde~AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~ 262 (381)
T PRK00257 183 HPTRHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDG 262 (381)
T ss_pred ccccccCCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHH
Confidence 467654 569999999999655422000 001 0133455211 12223456788777766554
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017438 353 IAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 353 ~amLl~n~v~a~~~~~~ 369 (371)
..-....+++...+|++
T Consensus 263 ~~r~~~~~~~nl~~~~~ 279 (381)
T PRK00257 263 KARGTAQIYQALCRFFG 279 (381)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44444445555555544
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=81.87 Aligned_cols=143 Identities=19% Similarity=0.229 Sum_probs=92.1
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------CCCHHhhccCCcEEEEccCC-C---
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIIISAVGQ-P--- 292 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------t~~l~~~l~~ADIVIsAvG~-p--- 292 (371)
+.+.++.+.++.||++.|||.|.+ |+.+|..|...|++|..++.. ..++++.+++||||+..++- +
T Consensus 104 L~l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~ 182 (378)
T PRK15438 104 LMLAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGP 182 (378)
T ss_pred HHHhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcc
Confidence 334455688999999999999996 999999999999999998742 13588999999999977761 1
Q ss_pred ----CcccCC---CcCCCeEEEEeeecCCCCCC-------CCCCceeecccchh------hhhhhcceeccCCCCccHHH
Q 017438 293 ----NMVRGS---WIKPGAVIIDVGINPVEDAK-------SPRGYRLVGDVCYE------EACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 293 ----~~v~~d---~ik~gavVIDvgin~~~~~~-------~~~g~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T 352 (371)
++++.+ .+|+|+++|+++--.+-|.. +.+-....=||=.. ...+....+||=-+|.-.=+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~ 262 (378)
T PRK15438 183 YKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEG 262 (378)
T ss_pred cccccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHH
Confidence 356554 46899999999965542200 00001234455211 11222337888778776544
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017438 353 IAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 353 ~amLl~n~v~a~~~~~~ 369 (371)
.......++++..++++
T Consensus 263 ~~~~~~~~~~~l~~~~~ 279 (378)
T PRK15438 263 KARGTTQVFEAYSKFIG 279 (378)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44333334444444443
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.3e-05 Score=79.91 Aligned_cols=81 Identities=23% Similarity=0.371 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. +++.
T Consensus 145 g~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 35789999999999986 9999999999999999987642 25778899999999999842 3565
Q ss_pred C---CCcCCCeEEEEeeecCC
Q 017438 297 G---SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~ 314 (371)
. +.+|+|+++||++--.+
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh
Confidence 4 45799999999996654
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.9e-05 Score=73.31 Aligned_cols=94 Identities=22% Similarity=0.242 Sum_probs=67.1
Q ss_pred cCCHHHHHHHHH----Hh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH--------------Hhh
Q 017438 219 PCTPKGCIELLH----RY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--------------EEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~----~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l--------------~~~ 278 (371)
|.|..|+...++ +. +.+++||+++|+|.|+ +|+.++..|.+.|++|++++++...+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 678888755555 33 7899999999999997 59999999999999999987753221 122
Q ss_pred c-cCCcEEEEccCCCCcccCCCcCC--CeEEEEeeecCC
Q 017438 279 T-RQADIIISAVGQPNMVRGSWIKP--GAVIIDVGINPV 314 (371)
Q Consensus 279 l-~~ADIVIsAvG~p~~v~~d~ik~--gavVIDvgin~~ 314 (371)
. .++||++.++.. +.|+.+.++. .-+|++-+-+|.
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQL 119 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCcc
Confidence 2 379999955542 3555554422 457788776655
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=78.57 Aligned_cols=75 Identities=17% Similarity=0.354 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc-cCC-CeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ-RED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~-~~g-AtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
..++++|||+|+. |+..+..|. .++ .+|+|++|+. .++++.+++|||||++|+.+.
T Consensus 128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~ 206 (326)
T TIGR02992 128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET 206 (326)
T ss_pred CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence 5789999999997 999988886 466 4799998762 356678899999999999765
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|+++|+.|.++|.+
T Consensus 207 p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 207 PILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cEecHHHcCCCcEEEeeCCC
Confidence 4789999999999999964
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.4e-05 Score=79.01 Aligned_cols=80 Identities=26% Similarity=0.409 Sum_probs=65.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------CCHHhhccCCcEEEEccCC-C---CcccCC---
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------KNPEEITRQADIIISAVGQ-P---NMVRGS--- 298 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------~~l~~~l~~ADIVIsAvG~-p---~~v~~d--- 298 (371)
.++.||++.|||.|.+ |+.+|.+|...|++|..+++.. .++.+.+++||+|+..++- | ++|+.+
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 4689999999999996 9999999999999998776432 2578999999999998872 2 467665
Q ss_pred CcCCCeEEEEeeecCC
Q 017438 299 WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 ~ik~gavVIDvgin~~ 314 (371)
++|+|+++|++|--.+
T Consensus 222 ~mk~ga~lIN~aRG~~ 237 (314)
T PRK06932 222 LMKPTAFLINTGRGPL 237 (314)
T ss_pred hCCCCeEEEECCCccc
Confidence 4699999999986543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.6e-05 Score=78.44 Aligned_cols=80 Identities=23% Similarity=0.328 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccC---
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRG--- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~--- 297 (371)
.+|.||++.|||.|.+ |+.+|.+|...|++|..++++. .++++.+++||+|+...+. | +++..
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999996 9999999999999999998642 3678889999999999883 2 35654
Q ss_pred CCcCCCeEEEEeeecCC
Q 017438 298 SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d~ik~gavVIDvgin~~ 314 (371)
+.+|+|+++|+++--..
T Consensus 197 ~~mk~ga~lIN~sRG~~ 213 (303)
T PRK06436 197 SLFRKGLAIINVARADV 213 (303)
T ss_pred hcCCCCeEEEECCCccc
Confidence 35699999999997654
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.7e-05 Score=78.50 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------CCHHhhccCCcEEEEccCC----CCcccCC---C
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------KNPEEITRQADIIISAVGQ----PNMVRGS---W 299 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------~~l~~~l~~ADIVIsAvG~----p~~v~~d---~ 299 (371)
.++.||++.|||.|.+ |+.+|.+|...|++|...++.. .++++.+++||+|+...+- -++|+.+ .
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 4689999999999996 9999999999999998776541 2588999999999998883 3467765 4
Q ss_pred cCCCeEEEEeeecCC
Q 017438 300 IKPGAVIIDVGINPV 314 (371)
Q Consensus 300 ik~gavVIDvgin~~ 314 (371)
+|+|+++|++|--.+
T Consensus 223 mk~ga~lIN~aRG~v 237 (317)
T PRK06487 223 MKPGALLINTARGGL 237 (317)
T ss_pred CCCCeEEEECCCccc
Confidence 699999999996543
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.1e-05 Score=77.67 Aligned_cols=80 Identities=30% Similarity=0.372 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccCC--
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRGS-- 298 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~d-- 298 (371)
.+|.||++.|||.|.+ |+.+|.+|...|++|..+++.. .++++.+++||+|+..++. | ++|..+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4689999999999996 9999999999999999887642 2578999999999988873 2 467665
Q ss_pred -CcCCCeEEEEeeecCC
Q 017438 299 -WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 -~ik~gavVIDvgin~~ 314 (371)
.+|||+++|+++--.+
T Consensus 220 ~~Mk~~a~lIN~aRG~v 236 (311)
T PRK08410 220 KLLKDGAILINVGRGGI 236 (311)
T ss_pred HhCCCCeEEEECCCccc
Confidence 5699999999996544
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=80.04 Aligned_cols=133 Identities=16% Similarity=0.284 Sum_probs=88.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
.++.||+|.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++. | +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4689999999999996 9999999999999999988652 3577889999999999983 2 356
Q ss_pred cCC---CcCCCeEEEEeeecCCCCCCC-----CCCce---eecccchhhh--------hhhcceeccCCCCccHHHHHHH
Q 017438 296 RGS---WIKPGAVIIDVGINPVEDAKS-----PRGYR---LVGDVCYEEA--------CEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~~~~~~-----~~g~k---l~GDVd~~~v--------~~~a~~iTPVPGGVGp~T~amL 356 (371)
+.+ .+|+|+++||++--.+-+... ..| + ...||=+.+= .--.-.+||=-+|.-.=+..-+
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~~ 345 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRALESG-HLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQARY 345 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhC-CccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHHH
Confidence 654 469999999998654321000 001 2 3456633210 0013367887777654444444
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
...+++..++|+
T Consensus 346 ~~~~~~ni~~~~ 357 (385)
T PRK07574 346 AAGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=2.5e-05 Score=77.41 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---CcccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMVRG 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v~~ 297 (371)
.+++||++.|||.|.+ |+.+|..|...|+.|+.++++. .++.+.+++||+|+...+. | +++..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999996 9999999999999999887542 2578889999999999884 2 24554
Q ss_pred C---CcCCCeEEEEeeecCC
Q 017438 298 S---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d---~ik~gavVIDvgin~~ 314 (371)
+ .+|+|+++|++|--.+
T Consensus 211 ~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred HHHhcCCCCcEEEECCCccc
Confidence 3 5699999999996543
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.2e-05 Score=77.03 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=64.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHh-ccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLL-QREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL-~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.+|.|++|.|||.|.+ |+.+|..| ...|++|+..+++. .++.+.+++||+|+.+++.. +++.
T Consensus 141 ~~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred cceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 34689999999999986 99999999 56788998887532 37888999999999998742 3454
Q ss_pred C---CCcCCCeEEEEeeecCC
Q 017438 297 G---SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~ 314 (371)
. +++|+|+++||++--..
T Consensus 220 ~~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 3 46799999999996543
|
|
| >PRK12862 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.8e-05 Score=81.55 Aligned_cols=172 Identities=15% Similarity=0.232 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcc
Q 017438 125 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 203 (371)
Q Consensus 125 ~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~ 203 (371)
.--.+.|.-.++.+| |++..+.+... +.+|+++.++.+- |++-||++.= -..-+--++++.+..+-|+.-||.
T Consensus 94 ~pv~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED--~~~~~~f~i~~~~~~~~~ip~f~D- 167 (763)
T PRK12862 94 KPVMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLED--IKAPECFYIERELRERMKIPVFHD- 167 (763)
T ss_pred cchHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeec--ccCchHHHHHHHHHhcCCCceEec-
Confidence 445567888887775 88777777643 7899999999987 7788877641 011123445555544445555552
Q ss_pred hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC---------
Q 017438 204 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 271 (371)
Q Consensus 204 N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~--------- 271 (371)
++.+-.-.+..|++..++-.+.+++..++++.|+|.+ |..++.+|...|. .+++|+++
T Consensus 168 ---------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 237 (763)
T PRK12862 168 ---------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTE 237 (763)
T ss_pred ---------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCc
Confidence 2334334566789999999999999999999999997 9999999999997 68898754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++|||+. .-+|+=+. ||.
T Consensus 238 ~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 238 LMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred cccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 1358899999999998887 89999999854 66777666 443
|
|
| >KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.5e-05 Score=73.54 Aligned_cols=82 Identities=28% Similarity=0.390 Sum_probs=70.1
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCCcccC
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNMVRG 297 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~~v~~ 297 (371)
...+-+.||.+||.|.|. |||.-|..|...|+.|+|..-.. ..+++.++++||+|++||.-+.|..
T Consensus 207 aTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 207 ATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 356778999999999999 59999999999999999986442 3578999999999999999888877
Q ss_pred CC---cCCCeEEEEeeecC
Q 017438 298 SW---IKPGAVIIDVGINP 313 (371)
Q Consensus 298 d~---ik~gavVIDvgin~ 313 (371)
+. .|.+++|.++|+.-
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd 304 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFD 304 (434)
T ss_pred HHHHhCcCCcEEecccccc
Confidence 65 48899999999753
|
|
| >COG5322 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.6e-05 Score=73.70 Aligned_cols=93 Identities=17% Similarity=0.266 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhccCCc
Q 017438 224 GCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEITRQAD 283 (371)
Q Consensus 224 gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l~~AD 283 (371)
++++-.++.|++++...|.|+|+-+.+|..+++.|..++......+|... ++.....++|
T Consensus 153 ~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e~ 232 (351)
T COG5322 153 QVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQED 232 (351)
T ss_pred HHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeeccccccccc
Confidence 45666667899999999999999999999999999999988888875420 1222334445
Q ss_pred EEE-EccCCCC-cccCCCcCCCeEEEEeeecCCCC
Q 017438 284 III-SAVGQPN-MVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 284 IVI-sAvG~p~-~v~~d~ik~gavVIDvgin~~~~ 316 (371)
++| +|+-.++ .|.+.++|||++|+|-|++.+-+
T Consensus 233 i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dvd 267 (351)
T COG5322 233 ILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDVD 267 (351)
T ss_pred eEEEEeecCCCceechhhccCCeEEEcCCcCcccc
Confidence 544 7776666 48999999999999999987644
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.6e-05 Score=77.81 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCCC----CcccC--
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQP----NMVRG-- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~p----~~v~~-- 297 (371)
.++.|+++.|||.|.+ |+++|..|...|++|+.++++. .++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 4689999999999986 9999999999999999988642 36788999999999999853 24443
Q ss_pred -CCcCCCeEEEEeeecCC
Q 017438 298 -SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 -d~ik~gavVIDvgin~~ 314 (371)
..+|+|+++|+++--.+
T Consensus 221 l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 221 FDHVKKGAILVNAARGAV 238 (330)
T ss_pred HhcCCCCcEEEEcCCccc
Confidence 34689999999985543
|
|
| >PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00012 Score=80.34 Aligned_cols=173 Identities=17% Similarity=0.255 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCc
Q 017438 124 SATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHP 202 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~ 202 (371)
+.--.+.|.-.++.+| |++..+.+... +.+|+++.++.+- |.+-||++.== ..-+--++++.+..+-|+.-||.
T Consensus 85 ~~pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~--~~p~~f~i~~~~~~~~~ip~f~D 159 (752)
T PRK07232 85 SKPVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDI--KAPECFYIEEKLRERMDIPVFHD 159 (752)
T ss_pred CccHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeec--CCchHHHHHHHHHHhcCCCeecc
Confidence 3444567888888775 88877777643 7889999998886 77888886411 11123345555544445555552
Q ss_pred chhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC--------
Q 017438 203 LNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR-------- 271 (371)
Q Consensus 203 ~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~-------- 271 (371)
++.+-.-.+..|++..|+-.+.+++..++++.|+|.+ |-.++.+|...|. .+++|+++
T Consensus 160 ----------D~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~ 228 (752)
T PRK07232 160 ----------DQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRT 228 (752)
T ss_pred ----------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCc
Confidence 2333334455789999999999999999999999987 9999999999987 68888754
Q ss_pred ---------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 ---------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 ---------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++||++. ..+|+=+. ||.
T Consensus 229 ~~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 229 EGMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred ccccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 1368899999999998777 89999999854 66777666 443
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=4e-05 Score=76.26 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=65.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
+.+|.||++.|||.|.+ |+.+|..|. ..|++|...++.. .++.+.+++||+|+..++. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999996 999999997 8899988776542 2578899999999988873 3 467
Q ss_pred cCC---CcCCCeEEEEeeecCC
Q 017438 296 RGS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~ 314 (371)
..+ .+|||+++|+++--.+
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~v 240 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPV 240 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccc
Confidence 665 4699999999985543
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=97.79 E-value=4e-05 Score=78.11 Aligned_cols=80 Identities=24% Similarity=0.295 Sum_probs=64.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCC----------------------------CCCHHhhccCCc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSR----------------------------TKNPEEITRQAD 283 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~----------------------------t~~l~~~l~~AD 283 (371)
+.++.||++.|||.|.+ |+.+|.+|. ..|++|..++++ ..++++.+++||
T Consensus 160 g~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sD 238 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREAD 238 (386)
T ss_pred CcCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCC
Confidence 34689999999999996 999999985 889999877542 136888999999
Q ss_pred EEEEccCC----CCcccCC---CcCCCeEEEEeeecC
Q 017438 284 IIISAVGQ----PNMVRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 284 IVIsAvG~----p~~v~~d---~ik~gavVIDvgin~ 313 (371)
||+..++- .++|+.+ ++|+|+++|+++--.
T Consensus 239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~ 275 (386)
T PLN02306 239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGP 275 (386)
T ss_pred EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 99988772 3467665 569999999999543
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.6e-05 Score=71.62 Aligned_cols=113 Identities=19% Similarity=0.316 Sum_probs=73.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCH-----------------HhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l-----------------~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ |.-.+..|++.|+.|+++.... +.+ ++.+..+|+||+||+.+.+
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 5789999999999885 9999999999999999996542 111 2357889999999998764
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTLT 362 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v~ 362 (371)
|..+. +.+. .+++.-++. .+|+-|.++.+. .-+|+ -||-.|..+..|=+++-+
T Consensus 85 ~~i~~~a-~~~~-lvn~~d~~~-----------~~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 85 EQVKEDL-PENA-LFNVITDAE-----------SGNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELEA 142 (202)
T ss_pred HHHHHHH-HhCC-cEEECCCCc-----------cCeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHHH
Confidence 43332 4454 334432221 134433332222 23343 478899888776555443
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.5e-05 Score=76.10 Aligned_cols=81 Identities=25% Similarity=0.374 Sum_probs=67.7
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCC-C---Cc
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ-P---NM 294 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~-p---~~ 294 (371)
.+.+|.||++-|||.|.+ |+.++..|...|++|..+++.. .+|.+.+++||||+.-++. | ++
T Consensus 136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~ 214 (324)
T COG0111 136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL 214 (324)
T ss_pred ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence 356889999999999996 9999999999999999998732 3588999999999998883 2 46
Q ss_pred ccCC---CcCCCeEEEEeeecC
Q 017438 295 VRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 295 v~~d---~ik~gavVIDvgin~ 313 (371)
|+.+ .+|+|+++|+++--.
T Consensus 215 i~~~~~a~MK~gailIN~aRG~ 236 (324)
T COG0111 215 INAEELAKMKPGAILINAARGG 236 (324)
T ss_pred cCHHHHhhCCCCeEEEECCCcc
Confidence 7665 469999999998544
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=8.2e-05 Score=73.90 Aligned_cols=87 Identities=21% Similarity=0.354 Sum_probs=67.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCC---------------------CCCHHhhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR---------------------TKNPEEIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~---------------------t~~l~~~l 279 (371)
.|++....-. .-..++++|||+|+. |+..+..|.. ++ .+|++++|+ ..++++.+
T Consensus 119 ~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al 195 (330)
T PRK08291 119 AGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAV 195 (330)
T ss_pred HHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHH
Confidence 5666655322 335689999999997 9987777763 55 579999876 13566788
Q ss_pred cCCcEEEEccCCCC-cccCCCcCCCeEEEEeeec
Q 017438 280 RQADIIISAVGQPN-MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ~~ADIVIsAvG~p~-~v~~d~ik~gavVIDvgin 312 (371)
++|||||++|+... +++.+|+++|+.|+.+|.+
T Consensus 196 ~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 196 AGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred ccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 99999999999655 5789999999999999865
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.3e-05 Score=77.28 Aligned_cols=133 Identities=17% Similarity=0.258 Sum_probs=87.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCC----Ccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQP----NMV 295 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p----~~v 295 (371)
.+|.||+|.|||.|.+ |+.+|..|...|+.|..++++. .++++.++++|+|+..++.. ++|
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4799999999999996 9999999999999999887541 36888999999999988742 256
Q ss_pred cCC---CcCCCeEEEEeeecCCCCCCC-----CCCce---eecccchhhhh-------h-hcceeccCCCCccHHHHHHH
Q 017438 296 RGS---WIKPGAVIIDVGINPVEDAKS-----PRGYR---LVGDVCYEEAC-------E-VASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~~~~~~-----~~g~k---l~GDVd~~~v~-------~-~a~~iTPVPGGVGp~T~amL 356 (371)
+.+ .+|+|+++||++--.+-|... ..| + ...||=+.+=. . -.-.+||=-+|.-.-+..-+
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~ 352 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDTQAVADACSSG-HIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRY 352 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcC-CceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHH
Confidence 554 469999999999654321000 001 2 34577432210 0 13367776676554444444
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
...+++..++|+
T Consensus 353 ~~~~~~nl~~~~ 364 (386)
T PLN03139 353 AAGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHHH
Confidence 444444444444
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=97.70 E-value=2.3e-05 Score=70.39 Aligned_cols=78 Identities=31% Similarity=0.458 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------C------------------------CC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------T------------------------KN 274 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------t------------------------~~ 274 (371)
.+...+|+|+|+|. ||+.++.+|...|++|++.+.. + ..
T Consensus 17 ~~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 35678999999987 5999999999999999998653 1 13
Q ss_pred HHhhccCCcEEEEcc-----CCCCcccCCCc---CCCeEEEEeeecC
Q 017438 275 PEEITRQADIIISAV-----GQPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 275 l~~~l~~ADIVIsAv-----G~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+.+.++.+|+||++. ..|.+|+.+++ ++|.+|+|+..+.
T Consensus 96 f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 96 FAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 557789999999654 25778888775 8899999998764
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00019 Score=71.16 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc-cCCC-eEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ-REDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~-~~gA-tVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
..++++|||.|+. |+..+..++ .+++ +|++++++. .++++.++++||||++|+.++
T Consensus 126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 5789999999997 988776654 4564 788887751 346678899999999999777
Q ss_pred c-ccCCCcCCCeEEEEeeec
Q 017438 294 M-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~-v~~d~ik~gavVIDvgin 312 (371)
. +. +|+++|+.|+-+|.+
T Consensus 205 p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 205 PVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred cchH-HhcCCCcEEEecCCC
Confidence 5 78 999999999999975
|
|
| >PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=6.9e-05 Score=76.83 Aligned_cols=78 Identities=27% Similarity=0.495 Sum_probs=65.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC-C---CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ-P---NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~-p---~~v~~d 298 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++. + +++..+
T Consensus 146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~ 224 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE 224 (409)
T ss_pred cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence 35799999999999996 9999999999999999887542 2688999999999998873 2 367654
Q ss_pred ---CcCCCeEEEEeee
Q 017438 299 ---WIKPGAVIIDVGI 311 (371)
Q Consensus 299 ---~ik~gavVIDvgi 311 (371)
.+|+|+++|+++-
T Consensus 225 ~l~~mk~ga~lIN~aR 240 (409)
T PRK11790 225 ELALMKPGAILINASR 240 (409)
T ss_pred HHhcCCCCeEEEECCC
Confidence 5699999999993
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.67 E-value=8.3e-05 Score=78.51 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEccCC----CCcc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQ----PNMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsAvG~----p~~v 295 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++ ..++++.+++||+|+..++. -+++
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 45799999999999996 999999999999999998763 13688999999999999883 2356
Q ss_pred cCC---CcCCCeEEEEeeecCC
Q 017438 296 RGS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~ 314 (371)
..+ .+|+|+++||++--.+
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~ 233 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI 233 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce
Confidence 543 4699999999996543
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00019 Score=70.92 Aligned_cols=77 Identities=30% Similarity=0.380 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
....+++.|||.|.. |++.+..+.. ++ .+|++++|+. .++++.+++|||||++|+.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 357899999999986 9999874443 44 6899998762 24567789999999999976
Q ss_pred Cc-ccCCCcCCCeEEEEeeec
Q 017438 293 NM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 293 ~~-v~~d~ik~gavVIDvgin 312 (371)
.. ++.+|++||++|.=+|.+
T Consensus 201 ~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 201 EPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCEecHHHcCCCCEEEeeCCC
Confidence 65 788999999954445543
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00012 Score=77.39 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=66.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+..++.. +++.
T Consensus 135 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 34689999999999996 9999999999999999987631 15778899999999999843 4665
Q ss_pred CC---CcCCCeEEEEeeecCC
Q 017438 297 GS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~~ 314 (371)
.+ .+|+|+++||++--.+
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~ 234 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI 234 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce
Confidence 54 5699999999996543
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00035 Score=68.88 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+...+++.|||.|.. |+..+..+.. ++ -+|.+++++. .++++.+++|||||++|+.++
T Consensus 122 ~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~ 200 (304)
T PRK07340 122 PAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRT 200 (304)
T ss_pred CCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCC
Confidence 457899999999996 9999888864 45 4799988751 256778899999999999877
Q ss_pred c-ccCCCcCCCeEEEEeeec
Q 017438 294 M-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~-v~~d~ik~gavVIDvgin 312 (371)
. ++. |+|||+.|.=+|.+
T Consensus 201 Pl~~~-~~~~g~hi~~iGs~ 219 (304)
T PRK07340 201 PVYPE-AARAGRLVVAVGAF 219 (304)
T ss_pred ceeCc-cCCCCCEEEecCCC
Confidence 5 565 89999999999965
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=97.58 E-value=9.8e-05 Score=61.33 Aligned_cols=60 Identities=30% Similarity=0.520 Sum_probs=46.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccCCCCc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
++++||+|+|||.|.+ |..-+..|++.||+|+++.... +.+++.+..+|+||.|++.+.+
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHH
Confidence 5789999999999985 9999999999999999997762 3456778899999999987653
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.56 E-value=8.1e-05 Score=66.36 Aligned_cols=73 Identities=26% Similarity=0.412 Sum_probs=55.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-c---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-R--- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~--- 296 (371)
++|-+||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||+++..+. .+ .
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 58999999986 9999999999999999999873 467788999999999998643 22 3
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
...+++|.++||++..
T Consensus 81 ~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTI 96 (163)
T ss_dssp GGGS-TTEEEEE-SS-
T ss_pred hhccccceEEEecCCc
Confidence 2456889999999865
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >COG0281 SfcA Malic enzyme [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00033 Score=71.84 Aligned_cols=172 Identities=18% Similarity=0.283 Sum_probs=124.9
Q ss_pred chHHHHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC-CCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSV-GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQL-PLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~-GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVql-PLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
++.--.+.|.-.++++ ||++.-+.+.. -+.+|+.+.|+.+. |.+-||+++- -.|+ --.+...+..+.||.-|
T Consensus 98 ag~pVmeGKa~Lfk~faGid~~pI~ld~-~~~~ei~~~Vkal~--p~FgginLedi~ap~---cf~ie~~lr~~~~IPvF 171 (432)
T COG0281 98 AGKPVMEGKAVLFKAFAGIDVLPIELDV-GTNNEIIEFVKALE--PTFGGINLEDIDAPR---CFAIEERLRYRMNIPVF 171 (432)
T ss_pred cCcchhhhHHHHHHHhcCCCceeeEeeC-CChHHHHHHHHHhh--hcCCCcceeecccch---hhHHHHHHhhcCCCCcc
Confidence 4445566788888775 69998898875 46678999999997 5799999873 1222 12344455557777777
Q ss_pred CcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC-----
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----- 272 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t----- 272 (371)
|.-- .+-.--|..|++..|+-.|.+|+..++++.|+|-+ |-.++.+|...|. +|++|+|+-
T Consensus 172 hDDq----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~ 240 (432)
T COG0281 172 HDDQ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDG 240 (432)
T ss_pred cccc----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCC
Confidence 6332 23222345789999999999999999999999887 9999999999996 699998761
Q ss_pred -CCH-------------------HhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecC
Q 017438 273 -KNP-------------------EEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINP 313 (371)
Q Consensus 273 -~~l-------------------~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~ 313 (371)
.++ .+.+..|||+|...|. +.+++|||+. +.+|+=+. ||
T Consensus 241 r~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP 302 (432)
T COG0281 241 REDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NP 302 (432)
T ss_pred CcccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CC
Confidence 010 2346789999988887 8889888854 45666555 44
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0002 Score=75.52 Aligned_cols=90 Identities=27% Similarity=0.446 Sum_probs=67.7
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------
Q 017438 223 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------- 272 (371)
Q Consensus 223 ~gvi~lL~~~~i----------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------- 272 (371)
.++++..++++. ...|.+|+|+|+|.+ |...+..+...||.|+++..+.
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 678887777653 346999999999885 9999999999999988876541
Q ss_pred -------------CC--------HHhhccCCcEEEEccCCCC-----cccCCC---cCCCeEEEEeeecC
Q 017438 273 -------------KN--------PEEITRQADIIISAVGQPN-----MVRGSW---IKPGAVIIDVGINP 313 (371)
Q Consensus 273 -------------~~--------l~~~l~~ADIVIsAvG~p~-----~v~~d~---ik~gavVIDvgin~ 313 (371)
.+ +.+.++.+|+||.++|.|. +++.++ +|+|.+|+|+|..+
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 01 0122367999999999644 565554 58999999999863
|
|
| >PRK12861 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00034 Score=76.87 Aligned_cols=172 Identities=15% Similarity=0.205 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcc
Q 017438 125 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 203 (371)
Q Consensus 125 ~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~ 203 (371)
.--.+.|.-.++++| |++..+.+.. -+.+|+++.++.+.. .+-||++.= -..-+--++++.+..+=|+..||.-
T Consensus 90 ~pvmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~~--~fg~i~lED--~~~p~~f~il~~~~~~~~ipvf~DD 164 (764)
T PRK12861 90 KPVMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLEP--TFGGINLED--IKAPECFTVERKLRERMKIPVFHDD 164 (764)
T ss_pred cchHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHHh--hcCCceeee--ccCchHHHHHHHHHhcCCCCeeccc
Confidence 344567888888775 8877777764 577899999988874 577755421 1111223344444332255555532
Q ss_pred hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC---------
Q 017438 204 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 271 (371)
Q Consensus 204 N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~--------- 271 (371)
+.+-.-.+..|++..|+-.+.+++..++++.|+|.+ |..++.+|...|. .+++|+++
T Consensus 165 ----------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~ 233 (764)
T PRK12861 165 ----------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTT 233 (764)
T ss_pred ----------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcc
Confidence 333223455789999999999999999999999997 9999999999997 68999754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++|||+. .-+|+=+. ||.
T Consensus 234 ~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 234 LMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 1368899999999997776 89999999854 66777666 554
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00019 Score=71.70 Aligned_cols=81 Identities=26% Similarity=0.445 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccC-CC---Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVG-QP---NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG-~p---~~v~ 296 (371)
+.+++||++-|||.|.+ |+.+|+.|..-|+.|...+++. -++.+.+++||+|+...+ .| |+|.
T Consensus 141 ~~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin 219 (324)
T COG1052 141 GFDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLIN 219 (324)
T ss_pred ccCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcC
Confidence 45899999999999997 9999999998899999888663 137789999999998887 33 4687
Q ss_pred CC---CcCCCeEEEEeeecCC
Q 017438 297 GS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~~ 314 (371)
.+ .+|+|+++|++|--.+
T Consensus 220 ~~~l~~mk~ga~lVNtaRG~~ 240 (324)
T COG1052 220 AEELAKMKPGAILVNTARGGL 240 (324)
T ss_pred HHHHHhCCCCeEEEECCCccc
Confidence 65 4699999999985543
|
|
| >PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase [] | Back alignment and domain information |
|---|
Probab=97.43 E-value=7.1e-05 Score=60.13 Aligned_cols=59 Identities=14% Similarity=0.318 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM 193 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p 193 (371)
.-+++++++|++..|..++ ++++++.+.++.+.+ +++.|++|++|++. +...+++.+++
T Consensus 14 ~hn~~f~~~g~~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~~VT~P~K~--~~~~~~D~~~~ 72 (83)
T PF08501_consen 14 IHNAAFEALGLDAVYIPFE--VEPEDLEDFLDALRA-PNFRGLNVTMPHKE--AAIPYLDELSP 72 (83)
T ss_dssp HHHHHHHHTTSSEEEEEEE--TSTTCHHHHHHHHHH-TTESEEEE-TTSTT--HHGGGSSEE-H
T ss_pred HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHhc-CCCCeeeecchHHH--HHHHHhccCCH
Confidence 3478899999999999996 667788888888888 78999999999996 33334444444
|
Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A .... |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00028 Score=69.44 Aligned_cols=73 Identities=25% Similarity=0.426 Sum_probs=59.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCc-----ccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM-----VRGS 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~-----v~~d 298 (371)
.+|..||.|.+ |.|+|..|++.|..|++++++. .+..+..++||+||+.++.+.- +.++
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 36889999986 9999999999999999999873 2445789999999999986542 2323
Q ss_pred ----CcCCCeEEEEeeec
Q 017438 299 ----WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 ----~ik~gavVIDvgin 312 (371)
..+||.++||+.+.
T Consensus 80 g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred chhhcCCCCCEEEECCCC
Confidence 35789999999865
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0003 Score=63.08 Aligned_cols=115 Identities=20% Similarity=0.215 Sum_probs=71.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCHH--------------hhccCCcEEEEccCCCCc---
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNPE--------------EITRQADIIISAVGQPNM--- 294 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~--------------~~l~~ADIVIsAvG~p~~--- 294 (371)
.++++||+|+|||.|.+ |.-.+..|++.|++|+++.... +++. +.+.++|+||.+|+.+..
T Consensus 8 ~l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N~~ 86 (157)
T PRK06719 8 MFNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHAVNMM 86 (157)
T ss_pred EEEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHHHHHH
Confidence 36899999999999885 9999999999999999985331 1111 247889999999997653
Q ss_pred ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017438 295 VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 295 v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
+. .+-+.+. .+.+.-++.. +|+-+.+..+ ..-+++ -||-+|.-+..|=+++-+.
T Consensus 87 i~-~~a~~~~-~vn~~d~~~~-----------~~f~~pa~v~~~~l~iais--T~G~sP~la~~lr~~ie~~ 143 (157)
T PRK06719 87 VK-QAAHDFQ-WVNVVSDGTE-----------SSFHTPGVIRNDEYVVTIS--TSGKDPSFTKRLKQELTSI 143 (157)
T ss_pred HH-HHHHHCC-cEEECCCCCc-----------CcEEeeeEEEECCeEEEEE--CCCcChHHHHHHHHHHHHH
Confidence 21 1223332 3333322211 2333322211 222343 4788998888876655443
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00044 Score=67.78 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCHHhhccCCcEEEEccCCCCc---c---cCCCcCCCeEEEEe
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPNM---V---RGSWIKPGAVIIDV 309 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~~~l~~ADIVIsAvG~p~~---v---~~d~ik~gavVIDv 309 (371)
++++|.|||.|.+ |.+++..|.+.|.+|++.+|+. .++.+.++++|+||.+++.... + .+..++++.+|||+
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 5678999999885 9999999999999999998764 5788889999999999986432 2 22236788999997
Q ss_pred e
Q 017438 310 G 310 (371)
Q Consensus 310 g 310 (371)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
|
|
| >KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00046 Score=69.22 Aligned_cols=79 Identities=22% Similarity=0.378 Sum_probs=62.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccC-CC---Ccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVG-QP---NMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG-~p---~~v 295 (371)
+.+++||+|.|+|.|.+ |+.+|..|..-|+.+.-+.|+.. ++.+.++++|+||.+.+ .+ ++|
T Consensus 157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li 235 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI 235 (336)
T ss_pred cccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence 56789999999999997 99999999998844444433321 67788999999998887 22 356
Q ss_pred cCC---CcCCCeEEEEeeec
Q 017438 296 RGS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin 312 (371)
..+ +.|+|+++|+++--
T Consensus 236 Nk~~~~~mk~g~vlVN~aRG 255 (336)
T KOG0069|consen 236 NKKFIEKMKDGAVLVNTARG 255 (336)
T ss_pred hHHHHHhcCCCeEEEecccc
Confidence 554 67999999999843
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00055 Score=69.35 Aligned_cols=74 Identities=18% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCCEEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCC-CCHHhhccCCcEEEEccCCCC---cccC-CCcCCCeEEEEee
Q 017438 237 KGKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPN---MVRG-SWIKPGAVIIDVG 310 (371)
Q Consensus 237 ~GK~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~~~l~~ADIVIsAvG~p~---~v~~-d~ik~gavVIDvg 310 (371)
..++|+||| .|. +|..++..|.+.|.+|+++++.. .+.++.+++||+||.+++... ++.. ..+++|++|+|+|
T Consensus 97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~ 175 (374)
T PRK11199 97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT 175 (374)
T ss_pred ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence 347899999 666 59999999999999999998754 356778899999999998433 2211 1178999999998
Q ss_pred e
Q 017438 311 I 311 (371)
Q Consensus 311 i 311 (371)
.
T Consensus 176 S 176 (374)
T PRK11199 176 S 176 (374)
T ss_pred C
Confidence 6
|
|
| >PLN02342 ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.021 Score=57.84 Aligned_cols=188 Identities=13% Similarity=0.119 Sum_probs=119.2
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhcc--C------CCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAI--G------VVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED-- 150 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~--g------~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~-- 150 (371)
.+|+-..+.++=.+.|-+...++|+.. + ..-+....++-+ .|..---.=..++.++|.++.++.-.+.
T Consensus 47 ~~lsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~~L~gk~va~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~ 124 (348)
T PLN02342 47 HFLHIDDFDKEEILGLLDRAKEVKALLKSGDRSFQPFKGKSMAMIFTK--PSMRTRVSFETGFFLLGGHALYLGPDDIQL 124 (348)
T ss_pred CccchhhCCHHHHHHHHHHHHHHHhhhhcCccccccCCCCEEEEEecC--CCcchHHHHHHHHHHcCCcEEEeCcccccC
Confidence 366666666544445555555555421 1 112233333332 3433334567889999999987632210
Q ss_pred CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHH
Q 017438 151 TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELL 229 (371)
Q Consensus 151 v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL 229 (371)
...|.+.+.+.-|..- +|+|.+-.|-. ..++.+...- .+-.+|.| .+.+.||=+.+ ++.+.
T Consensus 125 ~kGESl~DTarvLs~y--~D~IviR~~~~------~~~~~la~~~---~vPVINA~-------~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 125 GKREETRDIARVLSRY--NDIIMARVFAH------QDVLDLAEYS---SVPVINGL-------TDYNHPCQIMADALTII 186 (348)
T ss_pred CCCcCHHHHHHHHHHh--CCEEEEeCCCh------HHHHHHHHhC---CCCEEECC-------CCCCChHHHHHHHHHHH
Confidence 1235677777777764 78999886522 2233332221 24555642 23467998888 55555
Q ss_pred HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------CCCHHhhccCCcEEEE
Q 017438 230 HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------TKNPEEITRQADIIIS 287 (371)
Q Consensus 230 ~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------t~~l~~~l~~ADIVIs 287 (371)
++.| +++|++|+++|-+.-|.+.++.++...|++|++|+-. +.|+++.+++||+|.+
T Consensus 187 e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~ 265 (348)
T PLN02342 187 EHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAAGISKIEITNDPAEAVKGADVVYT 265 (348)
T ss_pred HHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEE
Confidence 5555 7999999999998888999999999999999998522 2567788999999997
Q ss_pred cc
Q 017438 288 AV 289 (371)
Q Consensus 288 Av 289 (371)
-.
T Consensus 266 ~~ 267 (348)
T PLN02342 266 DV 267 (348)
T ss_pred CC
Confidence 63
|
|
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00084 Score=66.78 Aligned_cols=75 Identities=19% Similarity=0.345 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc--cCCCeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCCC-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ--REDATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN- 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~--~~gAtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p~- 293 (371)
.-+++.|||.|.. |+..+..|. ....+|.+++++. .+.++.+++|||||++|+..+
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4578999999886 887544443 2335788887652 356788999999999998654
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
++..+|+|||+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 5789999999999999964
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00076 Score=59.91 Aligned_cols=69 Identities=33% Similarity=0.457 Sum_probs=51.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
||+|+|+|.. |.++|..|..+|.+|++..++ |.|+++.+++||+||.+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999996 999999999999999999654 35788999999999999986
Q ss_pred CCc---cc--CCCcCCCeEEEEe
Q 017438 292 PNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 292 p~~---v~--~d~ik~gavVIDv 309 (371)
..+ ++ ..+++++..+|-+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 432 21 2355778777754
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0011 Score=72.03 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=60.8
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhcc-CCcEEEEccCCCC---c
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITR-QADIIISAVGQPN---M 294 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~-~ADIVIsAvG~p~---~ 294 (371)
.+.++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. ++|+||.+++... +
T Consensus 363 ~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 363 CVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred ccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 345788999999999886 99999999999999999887632 3444454 5899999998432 2
Q ss_pred cc---CCCcCCCeEEEEeeec
Q 017438 295 VR---GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v~---~d~ik~gavVIDvgin 312 (371)
+. ...+++|++|+|++..
T Consensus 442 i~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 442 LKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHhcCCCCcEEEECCCc
Confidence 22 2347899999999743
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0021 Score=66.42 Aligned_cols=129 Identities=24% Similarity=0.272 Sum_probs=76.8
Q ss_pred HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----CHHhhccCCcEEEEccCC-CCcccCCCcCCC
Q 017438 229 LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----NPEEITRQADIIISAVGQ-PNMVRGSWIKPG 303 (371)
Q Consensus 229 L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----~l~~~l~~ADIVIsAvG~-p~~v~~d~ik~g 303 (371)
|.+++.+++||+|+|||.|.+ |..+|..|.++|++|+++++... .+.+.+++..|-+-. |. +. .....+
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~-~~~~~----~~~~~D 80 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL-GPGPT----LPEDTD 80 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE-CCCcc----ccCCCC
Confidence 567788899999999999996 99999999999999999986542 122333333332211 11 10 112234
Q ss_pred eEEEEeeecCCCCC---CCCCCceeecccchh-hhhh---hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 304 AVIIDVGINPVEDA---KSPRGYRLVGDVCYE-EACE---VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 304 avVIDvgin~~~~~---~~~~g~kl~GDVd~~-~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.+|+-.|+.+...- -...|-.+.++.++- ...+ +.-.| -|-|=.|.-|+.-|+.++++.+
T Consensus 81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence 45555555443110 011233566766642 1111 11112 3568899999999999998764
|
|
| >PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0019 Score=64.00 Aligned_cols=73 Identities=26% Similarity=0.361 Sum_probs=40.9
Q ss_pred CEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCCC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN--- 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p~--- 293 (371)
+++.|||.|.- |+.-+..|.. ++ -+|.|.+++. .+.++.+++|||||++|+...
T Consensus 129 ~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 129 RTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp -EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred ceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 45666666553 5544444332 22 2555555441 367899999999999999655
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|+-+|.+
T Consensus 208 ~~~~~~l~~g~hi~~iGs~ 226 (313)
T PF02423_consen 208 VFDAEWLKPGTHINAIGSY 226 (313)
T ss_dssp SB-GGGS-TT-EEEE-S-S
T ss_pred cccHHHcCCCcEEEEecCC
Confidence 6899999999999999975
|
The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A. |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0013 Score=63.70 Aligned_cols=71 Identities=21% Similarity=0.383 Sum_probs=55.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-cC---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-RG--- 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~~--- 297 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++... .+ ..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4789999886 9999999999999999998762 356678899999999998542 11 21
Q ss_pred -CCcCCCeEEEEeee
Q 017438 298 -SWIKPGAVIIDVGI 311 (371)
Q Consensus 298 -d~ik~gavVIDvgi 311 (371)
..+++|.++||.+.
T Consensus 80 ~~~~~~g~iivd~st 94 (291)
T TIGR01505 80 IEGAKPGKTLVDMSS 94 (291)
T ss_pred hhcCCCCCEEEECCC
Confidence 24578999999764
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0014 Score=61.22 Aligned_cols=59 Identities=19% Similarity=0.395 Sum_probs=48.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-CH-----------------HhhccCCcEEEEccCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NP-----------------EEITRQADIIISAVGQPN 293 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l-----------------~~~l~~ADIVIsAvG~p~ 293 (371)
++++||+|+|||.|.+ |..-+..|++.||.|||+..+.. .+ .+.+..+|+||.|+|.+.
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ 81 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE 81 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH
Confidence 5789999999999885 99999999999999999965431 11 234778999999999764
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0013 Score=65.87 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=59.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCC---cccC-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN---MVRG- 297 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~---~v~~- 297 (371)
.|+||+|.|||.|.+ |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+. ++..
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 478999999999886 9999999999999999986542 157788999999999887533 3432
Q ss_pred --CCcCCCeEE-EEeeec
Q 017438 298 --SWIKPGAVI-IDVGIN 312 (371)
Q Consensus 298 --d~ik~gavV-IDvgin 312 (371)
..+++|+++ +-=|+|
T Consensus 92 il~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 92 VEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHhcCCCCCEEEECCCcc
Confidence 356888754 333444
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0011 Score=62.46 Aligned_cols=73 Identities=30% Similarity=0.429 Sum_probs=57.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------CHHhhccCCcEEEEccCCCCc---cc--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------NPEEITRQADIIISAVGQPNM---VR-- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~l~~~l~~ADIVIsAvG~p~~---v~-- 296 (371)
+++.|+|+|++ |..++..|...|.+|++-+|+.+ ..++..+.|||||.|++.... +.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 57899999996 99999999999999999977643 345788999999999996543 21
Q ss_pred CCCcCCCeEEEEeeecCC
Q 017438 297 GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~~ 314 (371)
.+++. |.+|||+. ||.
T Consensus 81 ~~~~~-~KIvID~t-np~ 96 (211)
T COG2085 81 RDALG-GKIVIDAT-NPI 96 (211)
T ss_pred HHHhC-CeEEEecC-CCc
Confidence 24445 89999987 554
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0021 Score=63.59 Aligned_cols=76 Identities=16% Similarity=0.280 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l-~~ADIVIsAvG~p~---~v~- 296 (371)
+-+++++.|||.|.+ |..++..|.+.|.+|+++++.. .++++.+ .++|+||.+++... ++.
T Consensus 33 ~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~ 111 (304)
T PLN02256 33 KSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRS 111 (304)
T ss_pred cCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHh
Confidence 447889999999886 9999999999898899887653 2334444 46999999998432 232
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
...++++++|+|++.
T Consensus 112 l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 112 LPLQRLKRSTLFVDVLS 128 (304)
T ss_pred hhhhccCCCCEEEecCC
Confidence 234688999999996
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0017 Score=62.78 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=57.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-cC--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-RG-- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~~-- 297 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ ..
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 47999999886 9999999999999999998752 356677899999999998433 22 11
Q ss_pred --CCcCCCeEEEEeeecC
Q 017438 298 --SWIKPGAVIIDVGINP 313 (371)
Q Consensus 298 --d~ik~gavVIDvgin~ 313 (371)
..+++|.++||++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 2458899999997543
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.00051 Score=55.20 Aligned_cols=70 Identities=27% Similarity=0.396 Sum_probs=52.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCC---CeEEEE-eCCC---------------C-CHHhhccCCcEEEEccCCCCc--ccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED---ATVSIV-HSRT---------------K-NPEEITRQADIIISAVGQPNM--VRG 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g---AtVtv~-h~~t---------------~-~l~~~l~~ADIVIsAvG~p~~--v~~ 297 (371)
++.|||.|++ |..++..|.+.| .+|+++ +++. . +..+.+++||+||.++.-..+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 5789999996 999999999999 899965 6652 2 566788899999999975442 211
Q ss_pred --CCcCCCeEEEEee
Q 017438 298 --SWIKPGAVIIDVG 310 (371)
Q Consensus 298 --d~ik~gavVIDvg 310 (371)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 2466788999874
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0013 Score=64.15 Aligned_cols=74 Identities=18% Similarity=0.333 Sum_probs=58.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cccC-C-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG-S- 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~~-d- 298 (371)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||.+++... .+.. +
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 37999999986 9999999999999999998752 355677899999999998653 1221 1
Q ss_pred ---CcCCCeEEEEeeecC
Q 017438 299 ---WIKPGAVIIDVGINP 313 (371)
Q Consensus 299 ---~ik~gavVIDvgin~ 313 (371)
.+++|.++||++...
T Consensus 81 i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 357899999998654
|
|
| >PRK14804 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.024 Score=56.44 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=99.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCC-CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPE-DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~-~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
.|..=--+=..++.++|-++.++.-.+ +...+.+.+.++-|+. .+|+|.+-.| .|-... .+...- .+-
T Consensus 53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~----~~a~~~---~vP 121 (311)
T PRK14804 53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLL----VMKNGS---QVP 121 (311)
T ss_pred CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHH----HHHHHC---CCC
Confidence 344444456789999999988775432 1222344445666666 5899998865 322222 222211 234
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
.+|.| ...+.||=+.+ ++.+.|+.|. +++|++|++||.++-|.+.++.++...|++|++++-.
T Consensus 122 VINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 194 (311)
T PRK14804 122 VINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA 194 (311)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence 45643 12467998888 5555566654 6999999999997778999999999999999998632
Q ss_pred --------------CCCHHhhccCCcEEEEc
Q 017438 272 --------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.++.||+|.+-
T Consensus 195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 24667888999999973
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0021 Score=63.82 Aligned_cols=40 Identities=23% Similarity=0.482 Sum_probs=34.5
Q ss_pred CCHHhhccCCcEEEEccCCCC-cccCCCcCCCeEEEEeeec
Q 017438 273 KNPEEITRQADIIISAVGQPN-MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 273 ~~l~~~l~~ADIVIsAvG~p~-~v~~d~ik~gavVIDvgin 312 (371)
.+.++.+++||||+++|+... +++.+|++||+.|+=+|.+
T Consensus 184 ~~~~~av~~ADIV~taT~s~~P~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 184 LDAAEVAHAANLIVTTTPSREPLLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred CCHHHHhcCCCEEEEecCCCCceeCHHHcCCCcEEEecCCC
Confidence 357788999999999999655 5899999999999999954
|
|
| >cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0016 Score=63.92 Aligned_cols=92 Identities=18% Similarity=0.334 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC----CC-------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~----gA-------tVtv~h~~------------------ 271 (371)
+-.|++..|+-.+.+|+..+++++|+|.+ |..++.+|... |. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a 86 (279)
T cd05312 8 ALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFA 86 (279)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHH
Confidence 45789999999999999999999999987 99999888765 76 68888765
Q ss_pred --C-----CCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 --T-----KNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 --t-----~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
+ .+|.+.++ ++|++|...+.|+.+++|+|+ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 143 (279)
T cd05312 87 RKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NPT 143 (279)
T ss_pred hhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 1 25788888 899999999988999999874 356776666 543
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0023 Score=62.72 Aligned_cols=74 Identities=24% Similarity=0.350 Sum_probs=57.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCH-HhhccCCcEEEEccCCCC---cc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNP-EEITRQADIIISAVGQPN---MV 295 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l-~~~l~~ADIVIsAvG~p~---~v 295 (371)
-++|+|+|.|.+ |+.++..|..+|..|.++.+.. .+. .+....||+||.+++... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 468999999886 9999999999999998886542 122 566788999999998543 22
Q ss_pred cC--CCcCCCeEEEEeeec
Q 017438 296 RG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~~--d~ik~gavVIDvgin 312 (371)
+. ..+++|++|.|++..
T Consensus 82 ~~l~~~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAPHLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcccCCCCCEEEecccc
Confidence 11 168999999999964
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0024 Score=65.33 Aligned_cols=111 Identities=22% Similarity=0.248 Sum_probs=77.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
++|+|||+|+ ||+++|+.|++++ ..|++..|+. +.+.+++++.|+||++.+...
T Consensus 2 ~~ilviGaG~-Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGG-VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCch-hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 6899999988 5999999999998 7999998761 245688999999999998654
Q ss_pred c--ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC-CccHHHHHHHHHHHHHH
Q 017438 294 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG-GVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG-GVGp~T~amLl~n~v~a 363 (371)
- +-...++-|.-++|+.+.... . -++++.+++||. |-++| |+-|=-+..+...+++-
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~---------~---~~~~~~a~~Agi-t~v~~~G~dPGi~nv~a~~a~~~ 140 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEP---------P---WKLDEEAKKAGI-TAVLGCGFDPGITNVLAAYAAKE 140 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCch---------h---hhhhHHHHHcCe-EEEcccCcCcchHHHHHHHHHHH
Confidence 2 333557889999999876532 1 122344666762 33443 55565555666555443
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0031 Score=62.63 Aligned_cols=74 Identities=26% Similarity=0.418 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CCC-eEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-EDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~gA-tVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.-+++.|||.|.. |+..+..|.. .+. .|.+++++. .++++.+. +|+||++|+...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4578999999996 8888777763 344 688887652 24556665 999999999544
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|+|+|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 5899999999999999964
|
|
| >cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0016 Score=63.07 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-----------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-----------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-----------tVtv~h~~------------------ 271 (371)
|-.|++..++-.+.+|+..+++++|+|-+ |..++.+|...+. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 45688999999999999999999999987 9999998876543 58888765
Q ss_pred --------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 --------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 --------t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ ++|++|...+.|+.+++|+|+ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 144 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NPT 144 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-CcC
Confidence 126778888 999999999999999999884 355666665 443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0018 Score=63.26 Aligned_cols=73 Identities=26% Similarity=0.368 Sum_probs=56.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~ 296 (371)
.++|.|||.|.+ |..++..|.+.|. .|++++++. .++.+.++++|+||.+++... ++.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999999885 9999999998884 788887652 245667889999999998533 121
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
..+++++.+|+|+|.
T Consensus 85 ~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHhhCCCCCEEEeCcc
Confidence 246789999999985
|
|
| >PLN03129 NADP-dependent malic enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0088 Score=63.96 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=78.3
Q ss_pred cccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-----CCC-------eEEEEeCC-----------
Q 017438 215 PLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-----EDA-------TVSIVHSR----------- 271 (371)
Q Consensus 215 ~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-----~gA-------tVtv~h~~----------- 271 (371)
.+-.-++-.|++..++-.+.+|+..+++++|+|.+ |..+|.+|.. .|. .+++++++
T Consensus 298 QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l 376 (581)
T PLN03129 298 QGTAAVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSL 376 (581)
T ss_pred chHHHHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccC
Confidence 34345666889999999999999999999999987 9999988876 354 68888654
Q ss_pred -------------CCCHHhhccC--CcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 -------------TKNPEEITRQ--ADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 -------------t~~l~~~l~~--ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++. +|++|...+.++.++++||+ +.-+|+=+. ||.
T Consensus 377 ~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 377 QPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred hHHHHHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1367788888 99999999988999999886 566777666 543
|
|
| >PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.21 Score=49.79 Aligned_cols=146 Identities=12% Similarity=0.064 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..---+=..++.++|..+.++ .... ..|-+.+.++-|+.- .+++|.+--| .|-..+.+.+.+ ..
T Consensus 56 STRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~------~~ 124 (310)
T PRK13814 56 STRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL------SS 124 (310)
T ss_pred cchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC------CC
Confidence 3333335577889999987664 3221 124566666666652 3567777654 322222232222 12
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCC-eEEEEeCC----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDA-TVSIVHSR---- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gA-tVtv~h~~---- 271 (371)
+-++|.| ..+.+.||=+.+ ++.+.|+.| +++|++|+++|-+ +-|.+.++.++...|. +|++|+-.
T Consensus 125 vPvINag------~g~~~HPtQaLaDl~Ti~e~~g-~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p 197 (310)
T PRK13814 125 GVVINAG------DGNHQHPSQALIDLMTIKQHKP-HWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLP 197 (310)
T ss_pred CCeEECC------cCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCc
Confidence 4556643 234677998888 444444444 7999999999985 4469999999999998 89998632
Q ss_pred ----------CCCHHhhccCCcEEEE
Q 017438 272 ----------TKNPEEITRQADIIIS 287 (371)
Q Consensus 272 ----------t~~l~~~l~~ADIVIs 287 (371)
+.++++.+++||+|.+
T Consensus 198 ~~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 198 DKVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred CccccceEEEEcCHHHHhCCCCEEEE
Confidence 2577899999999986
|
|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0035 Score=63.23 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=51.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCC--------------------CCCHHhhccCCcEEEEccCCC---
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR--------------------TKNPEEITRQADIIISAVGQP--- 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~--------------------t~~l~~~l~~ADIVIsAvG~p--- 292 (371)
-+++.|||.|.- ++.-+..+.. +. -+|++.+++ ..++++.+++||||+++|+..
T Consensus 129 a~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 129 SRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 356777777664 5544333321 22 356666554 145788999999999999854
Q ss_pred CcccCCCcCCCeEEEEeeec
Q 017438 293 NMVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 293 ~~v~~d~ik~gavVIDvgin 312 (371)
.+++.+|+|||+.|.=+|.+
T Consensus 208 Pvl~~~~lkpG~hV~aIGs~ 227 (346)
T PRK07589 208 TILTDDMVEPGMHINAVGGD 227 (346)
T ss_pred ceecHHHcCCCcEEEecCCC
Confidence 35899999999999999954
|
|
| >PRK03515 ornithine carbamoyltransferase subunit I; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.025 Score=56.92 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=100.0
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 198 (371)
.|..=--+=..++.++|.++.+.. .+. ..|.+.+.++-|+.- +|+|.+--| .| ..++.+...-.
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~--~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~----~~~~~~a~~~~-- 122 (336)
T PRK03515 55 DSTRTRCSFEVAAYDQGARVTYLG--PSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQ----EIVETLAEYAG-- 122 (336)
T ss_pred CChhHHHHHHHHHHHcCCcEEEeC--CccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--Ch----HHHHHHHHhCC--
Confidence 344444456788999999988753 222 236688888888774 789999865 32 22333322112
Q ss_pred ccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC----
Q 017438 199 GFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR---- 271 (371)
Q Consensus 199 gl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~---- 271 (371)
+-.+|.+ .+...||=+.+ ++.+.++.|. +++|+++++||-+ .-|.+.++.++...|++|++|+-.
T Consensus 123 -vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~ 194 (336)
T PRK03515 123 -VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWP 194 (336)
T ss_pred -CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcC
Confidence 3445631 23567998888 5566566553 7999999999975 347999999999999999998632
Q ss_pred ---------------------CCCHHhhccCCcEEEEc
Q 017438 272 ---------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ---------------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 195 EAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred cHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 25677889999999975
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0017 Score=62.76 Aligned_cols=71 Identities=24% Similarity=0.275 Sum_probs=54.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------HHhhccCCcEEEEccCCCCc---cc--CCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------PEEITRQADIIISAVGQPNM---VR--GSW 299 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------l~~~l~~ADIVIsAvG~p~~---v~--~d~ 299 (371)
+|.|||.|.+ |..++..|.+.|.+|++++++... ..+.+++||+||.+++.... ++ ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999885 999999999999999999875321 12357899999999984322 21 134
Q ss_pred cCCCeEEEEeee
Q 017438 300 IKPGAVIIDVGI 311 (371)
Q Consensus 300 ik~gavVIDvgi 311 (371)
++++++|.|++.
T Consensus 81 l~~~~ii~d~~S 92 (279)
T PRK07417 81 LPPEAIVTDVGS 92 (279)
T ss_pred CCCCcEEEeCcc
Confidence 688999999984
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0032 Score=63.23 Aligned_cols=73 Identities=25% Similarity=0.392 Sum_probs=55.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccCCcEEEEccCCCC---cc--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQADIIISAVGQPN---MV-- 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~ADIVIsAvG~p~---~v-- 295 (371)
++|.|||.|.+ |..++..|.+.|..|.+..+.. .++++.+++||+||.+++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999886 9999999999998887776432 234566789999999998532 22
Q ss_pred -cCCCcCCCeEEEEeeec
Q 017438 296 -RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 -~~d~ik~gavVIDvgin 312 (371)
.+..++++++|.|++.-
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22147889999999854
|
|
| >PRK01713 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.031 Score=56.15 Aligned_cols=145 Identities=14% Similarity=0.117 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++..+ +.+. ..|.+.+.++-|..- +|+|.+--| .| ..++.+...-+
T Consensus 57 STRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~----~~~~~~a~~~~--- 123 (334)
T PRK01713 57 STRTRCAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQ----SIVNELAEYAG--- 123 (334)
T ss_pred CchHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--ch----HHHHHHHHhCC---
Confidence 4433345567889999998765 3221 235677787777774 889998755 22 22333322222
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.+ .+...||=+.+ ++.+.++.+.+++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 124 vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~ 196 (334)
T PRK01713 124 VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEA 196 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCCH
Confidence 3445642 23467998887 56666666657999999999986 447999999999999999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEc
Q 017438 272 -------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.+++||+|.+-
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 197 SLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 24677889999999973
|
|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0043 Score=61.26 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.-+++.|||+|.- |+.-+..+.. ++ -+|.|.+++. .+.++.+++||||+++|+...
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 4688889999775 7766655553 33 3677776552 357788999999999999665
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|.=+|.+
T Consensus 195 P~~~~~~l~pg~hV~aiGs~ 214 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSN 214 (301)
T ss_pred cEecHHHcCCCceEEecCCC
Confidence 5799999999999999965
|
|
| >PRK12562 ornithine carbamoyltransferase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.16 Score=51.13 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=101.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++.- .+ ...|.+.+.++-|+.- +++|.+--|-. ..+..+...-+
T Consensus 55 pSTRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~------~~~~~~a~~~~--- 122 (334)
T PRK12562 55 DSTRTRCSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQ------EVVETLAEYAG--- 122 (334)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCch------HHHHHHHHhCC---
Confidence 3444444567889999999987742 22 1235678888877774 88999986522 23333432223
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR----- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~----- 271 (371)
+-.+|.| .+...||=+.+ ++.+.++.+. .++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 123 vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~ 195 (334)
T PRK12562 123 VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPE 195 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCc
Confidence 3455642 23466998887 5555566653 5899999999985 347999999999999999998632
Q ss_pred --------------------CCCHHhhccCCcEEEEcc
Q 017438 272 --------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 --------------------t~~l~~~l~~ADIVIsAv 289 (371)
+.|+++.+++||+|.+-.
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 196 ASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 256778899999999754
|
|
| >PRK13529 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.015 Score=62.12 Aligned_cols=164 Identities=20% Similarity=0.247 Sum_probs=110.9
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhcCCCCccEEEEeCCC
Q 017438 129 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 178 (371)
Q Consensus 129 ~~k~k~~~~~-GI~---~~~~~lp~~v~--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 178 (371)
..|.-.+..+ ||+ +.-+.|+..+. -+|+.++++.+- |++ ++|+==
T Consensus 173 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~Ll~DP~YlG~r~~R~~g~eY~~f~defv~av~~~~--P~~---~I~~ED 247 (563)
T PRK13529 173 IGKLSLYTACGGIDPARTLPVVLDVGTNNEQLLNDPLYLGWRHPRIRGEEYDEFVDEFVQAVKRRF--PNA---LLQFED 247 (563)
T ss_pred ccHHHHhhccCCCChhheeceEEecCCCchhhccCccccCcCCCCCchHHHHHHHHHHHHHHHHhC--CCe---EEehhh
Confidence 4677777776 688 77777764322 367777777775 553 444321
Q ss_pred CCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHh
Q 017438 179 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258 (371)
Q Consensus 179 p~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL 258 (371)
...-+.-++++.. .+++-.|| ++..+-.-+|-.|++..++-.+.+++..+++++|+|.+ |..+|.+|
T Consensus 248 f~~~~af~iL~ry--r~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll 314 (563)
T PRK13529 248 FAQKNARRILERY--RDEICTFN----------DDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQI 314 (563)
T ss_pred cCCchHHHHHHHh--ccCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 1111333444443 22332222 22334445666889999999999999999999999987 99999988
Q ss_pred cc----CCC-------eEEEEeCC--------------------C------------CCHHhhccCC--cEEEEccCCCC
Q 017438 259 QR----EDA-------TVSIVHSR--------------------T------------KNPEEITRQA--DIIISAVGQPN 293 (371)
Q Consensus 259 ~~----~gA-------tVtv~h~~--------------------t------------~~l~~~l~~A--DIVIsAvG~p~ 293 (371)
.. +|. .+++|+++ + .+|.+.++.+ |++|...+.|+
T Consensus 315 ~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g 394 (563)
T PRK13529 315 VAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPG 394 (563)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCC
Confidence 86 576 68888754 0 2578889988 99999999899
Q ss_pred cccCCCcCC------CeEEEEee
Q 017438 294 MVRGSWIKP------GAVIIDVG 310 (371)
Q Consensus 294 ~v~~d~ik~------gavVIDvg 310 (371)
.+++|+|+. .-+|+=+.
T Consensus 395 ~Ft~evv~~Ma~~~erPIIFaLS 417 (563)
T PRK13529 395 AFTEEIVKEMAAHCERPIIFPLS 417 (563)
T ss_pred CCCHHHHHHHHhcCCCCEEEECC
Confidence 999988753 45666555
|
|
| >PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0023 Score=62.03 Aligned_cols=92 Identities=22% Similarity=0.334 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC----CC-------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~----gA-------tVtv~h~~------------------ 271 (371)
|-.|++..++-.+.+|+..+++++|+|.+ |-.++.+|... |. .+++++++
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 34678999999999999999999999987 98888888765 76 48999865
Q ss_pred -----C---CCHHhhccCC--cEEEEccCCCCcccCCCcCC------CeEEEEeeecCC
Q 017438 272 -----T---KNPEEITRQA--DIIISAVGQPNMVRGSWIKP------GAVIIDVGINPV 314 (371)
Q Consensus 272 -----t---~~l~~~l~~A--DIVIsAvG~p~~v~~d~ik~------gavVIDvgin~~ 314 (371)
. .+|.+.++++ |++|...|.|+.+++|+|+. .-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NPt 144 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NPT 144 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SSC
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CCC
Confidence 1 2788999999 99999999999999998853 45666665 443
|
g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B .... |
| >PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.031 Score=55.50 Aligned_cols=149 Identities=13% Similarity=0.221 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC--CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPE--DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~--~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
|..=--+=..++.++|.++.++.-.+ -...|-+.+.++-|+.- ++|+|.+--| .| ..+..+...- .+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~----~~~~~~a~~~---~vP 125 (305)
T PRK00856 56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QS----GAARLLAESS---DVP 125 (305)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--Ch----HHHHHHHHHC---CCC
Confidence 44444466788999999987654221 01224566666666652 3788888755 22 2233332211 234
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
.+|.|- .+...||=+.+ ++.+.|+.| +++|++|++||-+ +-|.+.++.++...|++|++|+-.
T Consensus 126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 556421 13567998888 666666665 6999999999885 446999999999999999999632
Q ss_pred -----CCCHHhhccCCcEEEEcc
Q 017438 272 -----TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----t~~l~~~l~~ADIVIsAv 289 (371)
+.++.+.++.||+|.+-.
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~ 221 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLR 221 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECC
Confidence 356788999999999855
|
|
| >PRK02255 putrescine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.047 Score=54.98 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|-++.++.- .+. ..|.+.+.+.-|+.- +|+|.+-.+ .|-. ++.+...- .+
T Consensus 53 STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~----~~~~a~~~---~v 120 (338)
T PRK02255 53 STRTRVSFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQT----VVELAKYA---TV 120 (338)
T ss_pred CcchHHHHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHH----HHHHHHhC---CC
Confidence 433334567889999999887752 221 235677788777774 788888754 3222 22232211 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~--i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.+ .+...||=+.+ ++.+.++.+ -+++|++|++||-..-|.+.++.++...|++|++|+-.
T Consensus 121 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 193 (338)
T PRK02255 121 PVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPE 193 (338)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCH
Confidence 455631 23457998887 555556664 36999999999997778999999999999999998632
Q ss_pred -------------------CCCHHhhccCCcEEEE
Q 017438 272 -------------------TKNPEEITRQADIIIS 287 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIs 287 (371)
+.++++.++.||+|.+
T Consensus 194 ~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~ 228 (338)
T PRK02255 194 EHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT 228 (338)
T ss_pred HHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence 2567889999999998
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0036 Score=60.74 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=54.6
Q ss_pred EEcCCcccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCcEEEEccCCCCc----cc--C---CC
Q 017438 243 VIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQPNM----VR--G---SW 299 (371)
Q Consensus 243 VIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~ADIVIsAvG~p~~----v~--~---d~ 299 (371)
+||.|.+ |.+++..|.+.|.+|++++++ +.+..+.++++|+||.+++.+.. +. . +.
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 5799886 999999999999999999876 24667788999999999986542 21 1 24
Q ss_pred cCCCeEEEEeeec
Q 017438 300 IKPGAVIIDVGIN 312 (371)
Q Consensus 300 ik~gavVIDvgin 312 (371)
+++|.++||++..
T Consensus 80 ~~~g~~vid~st~ 92 (288)
T TIGR01692 80 VAKGSLLIDCSTI 92 (288)
T ss_pred CCCCCEEEECCCC
Confidence 5789999999854
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.005 Score=60.21 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=55.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~---ADIVIsAvG~p~~----v~-- 296 (371)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+.++..++ +|+||++++.+.. +.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 5899999986 9999999999999999998762 345566555 6999999987632 21
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
.+.+++|.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1346789999999654
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.004 Score=63.33 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCC---CCCHHhhccCCcEEEEccCCCC---cccC-----CCcCCCe
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSR---TKNPEEITRQADIIISAVGQPN---MVRG-----SWIKPGA 304 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~---t~~l~~~l~~ADIVIsAvG~p~---~v~~-----d~ik~ga 304 (371)
.-.+|+|||.+|.+|..++..|.+. +.+|+.+.+. ..++.+.+++||+||.|++... ++.. .++++|+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~ 82 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ 82 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence 4568999999444599999999865 7788888653 3457788999999999998533 2321 2379999
Q ss_pred EEEEeeec
Q 017438 305 VIIDVGIN 312 (371)
Q Consensus 305 vVIDvgin 312 (371)
+|.|+|.-
T Consensus 83 iVtDVgSv 90 (370)
T PRK08818 83 LWLDVTSI 90 (370)
T ss_pred EEEECCCC
Confidence 99999963
|
|
| >TIGR00670 asp_carb_tr aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.17 Score=50.21 Aligned_cols=147 Identities=15% Similarity=0.186 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|.++.++.-+.+. ..|-+.+...-|+.- +|+|.+--| .|-....+.+.. .+
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~v 118 (301)
T TIGR00670 50 STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------EV 118 (301)
T ss_pred CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------CC
Confidence 4444446678999999998776441221 235577777777663 788988865 332333332222 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.|- ...+.||=+.+ ++.+.++.| +++|++|+++|-+ +-|.+.++.++...|++|++++-.
T Consensus 119 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~ 191 (301)
T TIGR00670 119 PVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK 191 (301)
T ss_pred CEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 4556421 13467998888 555555555 7999999999996 457999999999999999999633
Q ss_pred ---------------CCCHHhhccCCcEEEEc
Q 017438 272 ---------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ---------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.++.||+|.+-
T Consensus 192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 192 EILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 24667889999998874
|
Ornithine carbamoyltransferases are in the same superfamily and form an outgroup. |
| >PRK04284 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.04 Score=55.33 Aligned_cols=145 Identities=12% Similarity=-0.007 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++.+. +...+ -|.+.+.+.-|+.- +|+|.+--| .| ..++.+...-.
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~----~~~~~~a~~s~--- 122 (332)
T PRK04284 56 STRTRCAFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQ----RTVETLAEYSG--- 122 (332)
T ss_pred ChhHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--ch----HHHHHHHHhCC---
Confidence 4433345678899999998754 32222 36678888877774 889998755 22 23333322212
Q ss_pred cCcchhhhhccCCCccccccCCHHHHHHHHHHh-CCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRY-GFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~-~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.| .+...||=+.+=+--+.++ ..+++|++|++||-+ +-|.+.++.+|...|++|++|+-.
T Consensus 123 vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 195 (332)
T PRK04284 123 VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPDD 195 (332)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 3455632 2346799888844444444 347999999999975 347999999999999999998633
Q ss_pred -------------------CCCHHhhccCCcEEEEc
Q 017438 272 -------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.+++||+|.+-
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 196 ELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 24677889999999975
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0049 Score=58.08 Aligned_cols=115 Identities=21% Similarity=0.372 Sum_probs=71.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ |.-=+.+|++.||+|+|..-.. .-..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~v-a~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSV-ALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 5789999999999885 9889999999999999985432 1112455669999999997653
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
|-.. -++-.+.+++.-.|. .+|+-|.+..++ .-+|+ -||-+|+.+.|+.+.....
T Consensus 87 ~~i~~~-a~~~~i~vNv~D~p~-----------~~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~ 146 (210)
T COG1648 87 ERIAKA-ARERRILVNVVDDPE-----------LCDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEAL 146 (210)
T ss_pred HHHHHH-HHHhCCceeccCCcc-----------cCceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHH
Confidence 2111 111123334332221 134444332222 22333 4788888888888766543
|
|
| >PRK02102 ornithine carbamoyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.044 Score=55.07 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=102.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
+....++-+ .|..=--+=..++.++|.++.+..- .+ ...|.+.+.+.-|..- +++|.+--|-. ..+
T Consensus 47 k~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~~------~~~ 115 (331)
T PRK02102 47 KNIALIFEK--TSTRTRCAFEVAAIDLGAHVTYLGP-NDSQLGKKESIEDTARVLGRM--YDGIEYRGFKQ------EIV 115 (331)
T ss_pred CEEEEEeCC--CChhHHHHHHHHHHHcCCCEEEcCc-ccccCCCCcCHHHHHHHHhhc--CCEEEEECCch------HHH
Confidence 334444432 3444444567889999999875532 11 1235678888877764 88999886522 233
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEE
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSI 267 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv 267 (371)
+.+...-+ +-.+|.| .+...||=+.+=+-.++++...++|+++++||-+ .-|.+.++.++...|++|++
T Consensus 116 ~~~a~~~~---vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~ 185 (331)
T PRK02102 116 EELAKYSG---VPVWNGL-------TDEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRI 185 (331)
T ss_pred HHHHHhCC---CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence 33333223 3345642 2346699888844444444457999999999996 34799999999999999999
Q ss_pred EeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 268 VHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 268 ~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
++-. +.++++.+++||+|.+-
T Consensus 186 ~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 231 (331)
T PRK02102 186 CAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTD 231 (331)
T ss_pred ECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 8632 24667889999999975
|
|
| >PRK14031 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.014 Score=60.72 Aligned_cols=52 Identities=29% Similarity=0.280 Sum_probs=43.8
Q ss_pred ccccCCHHHHHHHH----HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 216 LFIPCTPKGCIELL----HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 216 ~~~PcTa~gvi~lL----~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
+-.+.|..|++..+ ++.+.+++||+|+|.|.|+ ||..++..|.+.||.|+.+
T Consensus 202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaV 257 (444)
T PRK14031 202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTM 257 (444)
T ss_pred CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 34578999866554 5678999999999999988 5999999999999998874
|
|
| >PRK11891 aspartate carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.05 Score=56.50 Aligned_cols=150 Identities=13% Similarity=0.085 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|.-=--+=..++.++|..+.++.=+.+. ..|-+.+.+.-|+.- +|+|.+--| .|-..+++.+.. .+
T Consensus 137 STRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~v 205 (429)
T PRK11891 137 STRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NL 205 (429)
T ss_pred CchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CC
Confidence 4444445678899999998876322211 124566666666663 788888754 322223332221 24
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCC---CCCCCEEEEEcCC--cccHHHHHHHhccC-CCeEEEEeCC--
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF---DIKGKRAVVIGRS--NIVGMPAALLLQRE-DATVSIVHSR-- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i---~l~GK~vvVIG~s--~~VGkpla~lL~~~-gAtVtv~h~~-- 271 (371)
-.+|.| + .+.+.||=+.+ ++.+.++.+. .++|++|+++|-+ +-+...++.+|... |++|++++-.
T Consensus 206 PVINAg-----d-g~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~ 279 (429)
T PRK11891 206 PVINGG-----D-GPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTL 279 (429)
T ss_pred CEEECC-----C-CCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCcc
Confidence 455642 1 24567998888 6666666642 4899999999996 34588888887765 9999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEccC
Q 017438 272 -------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAvG 290 (371)
+.|+++.+++||+|.+..+
T Consensus 280 ~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 280 EMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred ccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 3577889999999998664
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0045 Score=56.39 Aligned_cols=76 Identities=28% Similarity=0.434 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 297 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~---p~~v~~- 297 (371)
|+||+|.|||.|.- |+.-|+.|.+.|.+|+|..+.. .+..|.+++||+|+..++- +.+...
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~ 80 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE 80 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence 58999999999986 9999999999999999998764 3567899999999999872 222211
Q ss_pred --CCcCCCeEE-EEeeec
Q 017438 298 --SWIKPGAVI-IDVGIN 312 (371)
Q Consensus 298 --d~ik~gavV-IDvgin 312 (371)
..+++|+++ +==|+|
T Consensus 81 I~p~l~~G~~L~fahGfn 98 (165)
T PF07991_consen 81 IAPNLKPGATLVFAHGFN 98 (165)
T ss_dssp HHHHS-TT-EEEESSSHH
T ss_pred HHhhCCCCCEEEeCCcch
Confidence 247888643 333444
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0045 Score=63.59 Aligned_cols=74 Identities=26% Similarity=0.367 Sum_probs=55.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------HHhh---------------ccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------PEEI---------------TRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------l~~~---------------l~~ADIVIsA 288 (371)
++|.|||.|.+ |.|+|..|+++|.+|+.++++... +.+. ..+||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999885 999999999999999999876422 2222 2379999999
Q ss_pred cCCC---------Cccc------CCCcCCCeEEEEeeecC
Q 017438 289 VGQP---------NMVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 289 vG~p---------~~v~------~d~ik~gavVIDvgin~ 313 (371)
++.| ..+. ...+++|++||+..+-+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9986 1221 13468899998877644
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0042 Score=60.28 Aligned_cols=71 Identities=20% Similarity=0.350 Sum_probs=52.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC----eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCcc----
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA----TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMV---- 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA----tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v---- 295 (371)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++|||||.++. |..+
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl 80 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI 80 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence 47999999986 9999999998773 688887642 234456789999999998 4422
Q ss_pred cC--CCcCCCeEEEEeee
Q 017438 296 RG--SWIKPGAVIIDVGI 311 (371)
Q Consensus 296 ~~--d~ik~gavVIDvgi 311 (371)
.. +.++++.+|||+.-
T Consensus 81 ~~l~~~~~~~~lvISi~A 98 (272)
T PRK12491 81 NQIKDQIKNDVIVVTIAA 98 (272)
T ss_pred HHHHHhhcCCcEEEEeCC
Confidence 11 34677889999863
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.005 Score=60.27 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=55.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCC----cc-cCC---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN----MV-RGS--- 298 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~----~v-~~d--- 298 (371)
+|.+||.|.+ |.+++..|.+.|..|++++++. .+..+..+++|+||.++..+. .+ ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999986 9999999999999999987642 245566789999999998653 12 222
Q ss_pred -CcCCCeEEEEeeec
Q 017438 299 -WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 -~ik~gavVIDvgin 312 (371)
.+++|.+|||++..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 25789999998854
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0063 Score=58.77 Aligned_cols=72 Identities=15% Similarity=0.266 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCCc--
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM-- 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~~-- 294 (371)
++.++.+||.|.+ |.+++..|++.| ..|++++++. .+..+.++++|+||.++....+
T Consensus 2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~ 80 (279)
T PRK07679 2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAE 80 (279)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHH
Confidence 3468999999886 999999999887 6788888742 2334567899999999984332
Q ss_pred -cc--CCCcCCCeEEEEe
Q 017438 295 -VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 -v~--~d~ik~gavVIDv 309 (371)
+. .+.++++.+|||+
T Consensus 81 vl~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 81 ALIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHHhhcCCCCEEEEE
Confidence 21 1346788999997
|
|
| >PLN02527 aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.082 Score=52.50 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC-CC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPE-DT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~-~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++.++.-.. +. ..|-+.+.+.-|+.- +|+|.+--|- |-..+.+.+.. .
T Consensus 50 StRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~~--~~~~~~~a~~~----~--- 118 (306)
T PLN02527 50 STRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHFE--SGAARRAAATA----E--- 118 (306)
T ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECCC--hhHHHHHHHhC----C---
Confidence 44444466789999999988775431 11 236677777777764 7899988653 22223332221 2
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-c-ccHHHHHHHhccC-CCeEEEEeCC----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-N-IVGMPAALLLQRE-DATVSIVHSR---- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~-~VGkpla~lL~~~-gAtVtv~h~~---- 271 (371)
+-.+|.|- .+...||=+.+ ++.+.++.| +++|++|+++|-+ + -+.+.++..|... |++|++++-.
T Consensus 119 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~ 191 (306)
T PLN02527 119 IPVINAGD------GPGQHPTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM 191 (306)
T ss_pred CCEEECCC------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 34456421 23467998888 444445555 6999999999976 3 2588888887776 8999988632
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv 289 (371)
+.|+++.+++||+|.+-.
T Consensus 192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 257789999999999854
|
|
| >TIGR00658 orni_carb_tr ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.067 Score=53.00 Aligned_cols=146 Identities=18% Similarity=0.260 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
|..=--+=..++.++|.++.++.-... ...|-+.+.+.-|+.- +++|.+--|-. ..++.+...-+ +-
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~------~~~~~~a~~~~---vP 118 (304)
T TIGR00658 50 STRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH------EDVEELAKYAS---VP 118 (304)
T ss_pred CcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh------HHHHHHHHhCC---CC
Confidence 443344557889999999887643211 1135677777777774 78888886522 22233322212 34
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------- 271 (371)
.+|.| .....||=+.+ ++.+.++.| .++|.+|+++|-..-|.+.++.+|...|++|++++-.
T Consensus 119 VINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~ 190 (304)
T TIGR00658 119 VINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIV 190 (304)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence 55653 13466998887 455555555 5999999999996668999999999999999999622
Q ss_pred ----------------CCCHHhhccCCcEEEEc
Q 017438 272 ----------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ----------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 191 ~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 191 KKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred HHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 24677899999999974
|
Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. |
| >TIGR03316 ygeW probable carbamoyltransferase YgeW | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.073 Score=54.07 Aligned_cols=155 Identities=17% Similarity=0.157 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhcCCCCccEEEEeCCCC---CCCCHHHHHhhCC-cccc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLP---CHIDEQSILNAVS-MEKD 196 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~---~~el~~~I~~LN~D~~V~GIlVqlPLp---~~i~~~~i~~~I~-p~KD 196 (371)
|..---+=..++.++|.++.++.- .+.+ -|-+.+.++-|+.- +|+|.+-.|-. .|-..+.+.+... --||
T Consensus 53 STRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~~ 129 (357)
T TIGR03316 53 STRTRFSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKD 129 (357)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhcccc
Confidence 333334567789999999988763 2221 35577777777764 78999887642 2111122222211 0122
Q ss_pred -c--CccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEEcC-------CcccHHHHHHHhccCCC
Q 017438 197 -V--DGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVIGR-------SNIVGMPAALLLQREDA 263 (371)
Q Consensus 197 -V--Dgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVIG~-------s~~VGkpla~lL~~~gA 263 (371)
| -.+-.+|.| .+.+.||=+.+ ++.+.++.|. +++|++|+++|. ...|.+.++.++...|+
T Consensus 130 ~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G~ 202 (357)
T TIGR03316 130 GVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGM 202 (357)
T ss_pred ccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCC
Confidence 0 013345643 23477998888 5555566663 489999999974 33567788888888999
Q ss_pred eEEEEeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 264 TVSIVHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 264 tVtv~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
+|++++-. +.++.+.+++||||.+-
T Consensus 203 ~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 252 (357)
T TIGR03316 203 DVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK 252 (357)
T ss_pred EEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 99999633 24567888999999866
|
Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0078 Score=52.85 Aligned_cols=53 Identities=26% Similarity=0.481 Sum_probs=43.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
||+|||+++.||..++.+|...+. ++.+++... .+.++.+++|||||.+.|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966679999999998873 688887651 24568899999999999976
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.01 Score=58.03 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=54.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~---ADIVIsAvG~p~~----v~-- 296 (371)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+. +|+||++++.... +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999886 9999999999999999998863 244455554 6999999886532 11
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
.+.+++|.++||.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 1346788999998654
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0083 Score=57.05 Aligned_cols=68 Identities=24% Similarity=0.386 Sum_probs=50.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC----eEEEE-eCCC--------------CCHHhhccCCcEEEEccCCCCccc----
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA----TVSIV-HSRT--------------KNPEEITRQADIIISAVGQPNMVR---- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA----tVtv~-h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v~---- 296 (371)
+|.+||.|.+ |.+++..|.+.|. +|+++ +++. .+..+.++++|+||.++ .|..+.
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHHHHHHHH
Confidence 5899999886 9999999999887 88888 6542 34556678999999999 454221
Q ss_pred --CCCcCCCeEEEEe
Q 017438 297 --GSWIKPGAVIIDV 309 (371)
Q Consensus 297 --~d~ik~gavVIDv 309 (371)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1245677777765
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0079 Score=58.42 Aligned_cols=74 Identities=26% Similarity=0.433 Sum_probs=55.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~~ADIVIsAvG 290 (371)
.+|.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999885 9999999999999999997641 134456789999999998
Q ss_pred CCCc---cc--CCCcCCCeEEEEe--eecC
Q 017438 291 QPNM---VR--GSWIKPGAVIIDV--GINP 313 (371)
Q Consensus 291 ~p~~---v~--~d~ik~gavVIDv--gin~ 313 (371)
...+ +. ..+++++++|||+ |+.+
T Consensus 81 ~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 81 SQALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 6431 11 1356789999999 5543
|
|
| >PTZ00317 NADP-dependent malic enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.033 Score=59.42 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=109.1
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhcCCCCccEEEEeCCC
Q 017438 129 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 178 (371)
Q Consensus 129 ~~k~k~~~~~-GI~---~~~~~lp~~v~--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 178 (371)
..|.-.+..+ ||+ +.-+.|+..++ -+|+.++++++- |+ .+||.==
T Consensus 175 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnN~~LL~DPlYlG~r~~R~~g~eY~~f~defv~av~~~~--P~---~~Iq~ED 249 (559)
T PTZ00317 175 IGKLSLYVAGGGINPSRVLPVVLDVGTNNEKLLNDPLYLGLREKRLDDDEYYELLDEFMEAVSSRW--PN---AVVQFED 249 (559)
T ss_pred ccHHHHHHhhcCCChhhccceEEecCCChhhhccCcccccccCCCCChhhHHHHHHHHHHHHHHhC--CC---eEEehhh
Confidence 4566666666 588 66666654222 366677776664 44 2444421
Q ss_pred CCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHh
Q 017438 179 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258 (371)
Q Consensus 179 p~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL 258 (371)
...-+.-++++... +++-. +| ++..+-.-++-.|++..++-.+.+|+..+++++|+|.+ |..+|.+|
T Consensus 250 f~~~naf~iL~kyr--~~i~~---Fn-------DDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll 316 (559)
T PTZ00317 250 FSNNHCFDLLERYQ--NKYRC---FN-------DDIQGTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNI 316 (559)
T ss_pred cCCccHHHHHHHhc--cCCCE---ec-------ccchhHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 11223333444332 12222 22 22334445677889999999999999999999999987 99999888
Q ss_pred cc----CCC-------eEEEEeCC-----------------------------CCCHHhhccCC--cEEEEccCCCCccc
Q 017438 259 QR----EDA-------TVSIVHSR-----------------------------TKNPEEITRQA--DIIISAVGQPNMVR 296 (371)
Q Consensus 259 ~~----~gA-------tVtv~h~~-----------------------------t~~l~~~l~~A--DIVIsAvG~p~~v~ 296 (371)
.. .|. .+++++++ ..+|.+.++.+ |++|.+.+.|+.++
T Consensus 317 ~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft 396 (559)
T PTZ00317 317 ADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFT 396 (559)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCC
Confidence 73 565 68887643 12577888888 99999999899999
Q ss_pred CCCcC------CCeEEEEeeecC
Q 017438 297 GSWIK------PGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~ik------~gavVIDvgin~ 313 (371)
+|+|+ +.-+|+=+. ||
T Consensus 397 ~evv~~Ma~~~~rPIIFaLS-NP 418 (559)
T PTZ00317 397 EEVVKTMASNVERPIIFPLS-NP 418 (559)
T ss_pred HHHHHHHHhcCCCCEEEECC-CC
Confidence 88875 345666555 44
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.009 Score=61.88 Aligned_cols=71 Identities=21% Similarity=0.367 Sum_probs=55.1
Q ss_pred EEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCC---ccc--CC
Q 017438 240 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPN---MVR--GS 298 (371)
Q Consensus 240 ~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~---~v~--~d 298 (371)
++.||| .|. +|..++..|.+.|..|+++.++. .+..+.+.++|+||.+++... ++. ..
T Consensus 2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAP 80 (437)
T ss_pred EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHh
Confidence 689998 465 59999999999999999987653 244566789999999998432 222 23
Q ss_pred CcCCCeEEEEeee
Q 017438 299 WIKPGAVIIDVGI 311 (371)
Q Consensus 299 ~ik~gavVIDvgi 311 (371)
+++++++|+|++.
T Consensus 81 ~l~~~~iViDvsS 93 (437)
T PRK08655 81 HVKEGSLLMDVTS 93 (437)
T ss_pred hCCCCCEEEEccc
Confidence 5789999999995
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0084 Score=59.10 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=56.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhccCCcEEEEcc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~~ADIVIsAv 289 (371)
..+|.|||.|.+ |.+++..|.+.|..|++++++. .++++.++++|+||.++
T Consensus 4 ~m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 347999999886 9999999999999999998741 14456678899999999
Q ss_pred CCCCccc-CCCcCCCeEEEEeee
Q 017438 290 GQPNMVR-GSWIKPGAVIIDVGI 311 (371)
Q Consensus 290 G~p~~v~-~d~ik~gavVIDvgi 311 (371)
....+-. -+.++++.++||+..
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEee
Confidence 8654311 134678899999864
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.011 Score=56.93 Aligned_cols=70 Identities=24% Similarity=0.321 Sum_probs=51.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCc---cc--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM---VR--G 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~---v~--~ 297 (371)
+|.|||.|.+ |.+++..|.+.|. +|++++++. .+..+. .++|+||.+++.... +. .
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEEL-KKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHH-hcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999885 9999999998885 688777642 234443 459999999985432 21 1
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
. ++++++|+|+|..
T Consensus 80 ~-l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D-IKENTTIIDLGST 93 (275)
T ss_pred c-cCCCCEEEECccc
Confidence 2 7889999999864
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.03 Score=57.54 Aligned_cols=94 Identities=26% Similarity=0.311 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHhC--CCCCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC--------
Q 017438 220 CTPKGCIELLHRYG--FDIKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK-------- 273 (371)
Q Consensus 220 cTa~gvi~lL~~~~--i~l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~-------- 273 (371)
..|.-+++.++++- -+++||+|+|-|+ ||-.|+.+|..|..+||+|+++++...
T Consensus 168 ~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~ 247 (399)
T PRK05579 168 AEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVK 247 (399)
T ss_pred CCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcE
Confidence 34556655555432 4689999999998 775699999999999999999875421
Q ss_pred --------CH----HhhccCCcEEEEccCCCCcc----cCCCcCCC--eEEEEeeecC
Q 017438 274 --------NP----EEITRQADIIISAVGQPNMV----RGSWIKPG--AVIIDVGINP 313 (371)
Q Consensus 274 --------~l----~~~l~~ADIVIsAvG~p~~v----~~d~ik~g--avVIDvgin~ 313 (371)
++ .+...+.|++|.++|...+- ...-+|++ ...+.+--||
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~p 305 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNP 305 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCc
Confidence 11 13346789999998865442 22335543 3566766665
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0082 Score=58.73 Aligned_cols=72 Identities=14% Similarity=0.174 Sum_probs=54.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCH---HhhccCCcEEEEccCCCC---ccc--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNP---EEITRQADIIISAVGQPN---MVR--G 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l---~~~l~~ADIVIsAvG~p~---~v~--~ 297 (371)
+|.|||.|.+ |.+++..|.+.|.+|++.+++. .++ .+.+.++|+||.+++... ++. .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999886 9999999999999999998763 122 234567899999988642 121 1
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
..+++|.+|||++..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 346889999998754
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.01 Score=59.66 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN---MVRG 297 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~---~v~~ 297 (371)
.++||+|.|||.|.+ |.++|..|...|.+|.+..+.. .+..+.+++||+|+.+++... ++..
T Consensus 14 ~L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~ 92 (330)
T PRK05479 14 LIKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEE 92 (330)
T ss_pred hhCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHH
Confidence 368999999999986 9999999999999998876541 256678899999999998322 2311
Q ss_pred ---CCcCCCeEE
Q 017438 298 ---SWIKPGAVI 306 (371)
Q Consensus 298 ---d~ik~gavV 306 (371)
..+++|++|
T Consensus 93 ~I~~~Lk~g~iL 104 (330)
T PRK05479 93 EIEPNLKEGAAL 104 (330)
T ss_pred HHHhcCCCCCEE
Confidence 246778766
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.011 Score=60.41 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|+|+|+|.|. .|.++|..|+++|++|+++.+..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999999 59999999999999999998763
|
|
| >PRK00779 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.11 Score=51.58 Aligned_cols=147 Identities=16% Similarity=0.202 Sum_probs=98.7
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
.|..=--+=..++.++|.++.++.-... ...|.+.+.+.-|+.- +|+|.+--| .+ ..++.+... -.+
T Consensus 53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~--~~----~~~~~~a~~---~~v 121 (304)
T PRK00779 53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTF--EH----ETLEELAEY---STV 121 (304)
T ss_pred CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCC--Ch----hHHHHHHHh---CCC
Confidence 3444444668899999999887643210 1135577777777764 778887755 32 233333221 224
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.|. +...||=+.+ ++.+.++.| .++|++++++|-.+-|.+.++.+|...|++|++|+-.
T Consensus 122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g-~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~ 193 (304)
T PRK00779 122 PVINGLT-------DLSHPCQILADLLTIYEHRG-SLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEI 193 (304)
T ss_pred CEEeCCC-------CCCChHHHHHHHHHHHHHhC-CcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 5667642 2356887777 444444554 6999999999995567999999999999999998632
Q ss_pred --------------CCCHHhhccCCcEEEEc
Q 017438 272 --------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 194 ~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 194 VEKIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24677889999999975
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.014 Score=57.33 Aligned_cols=53 Identities=23% Similarity=0.430 Sum_probs=42.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCCC------------------------CHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK------------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t~------------------------~l~~~l~~ADIVIsAvG~p 292 (371)
++|+|||+|+ ||..++..|+.+| .+|++++++.. .-.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 4799999988 5999999999998 37999986421 1124578999999999976
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.012 Score=57.00 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=54.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------------------------------CCCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------------------------t~~l~~~l~ 280 (371)
++|.|||.|.+ |.++|..|++.|.+|++++++ +.++++.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999875 999999999999999998754 234556789
Q ss_pred CCcEEEEccCCCCccc-------CCCcCCCeEE-EEeee
Q 017438 281 QADIIISAVGQPNMVR-------GSWIKPGAVI-IDVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~-------~d~ik~gavV-IDvgi 311 (371)
+||+||.+++...-++ .+.+++++++ +|...
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999998543111 2356778755 56654
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.014 Score=59.57 Aligned_cols=123 Identities=18% Similarity=0.263 Sum_probs=68.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---HHhhccCCcEEEEccCCCCcccCCCcC--CCeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITRQADIIISAVGQPNMVRGSWIK--PGAVIIDV 309 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---l~~~l~~ADIVIsAvG~p~~v~~d~ik--~gavVIDv 309 (371)
+++||+++|+|.|+ .|+++|..|+++|++|+++.++... ..+.++...+-+. .|. ...+.+. ...+|.--
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~---~~~~~~~~~~d~vV~s~ 76 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGS---HPLELLDEDFDLMVKNP 76 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCC---CCHHHhcCcCCEEEECC
Confidence 36899999999999 5999999999999999999765321 1122222121111 110 0001111 22344444
Q ss_pred eecCCCCCC----CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 310 GINPVEDAK----SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 310 gin~~~~~~----~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
|+.+.. +- ...|-+++++.++...... .-+.-|-|-.|.-|+..|+.++++.+
T Consensus 77 gi~~~~-~~~~~a~~~~i~v~~~~el~~~~~~-~~~I~VTGT~GKTTTt~ll~~iL~~~ 133 (447)
T PRK02472 77 GIPYTN-PMVEKALEKGIPIITEVELAYLISE-APIIGITGSNGKTTTTTLIGEMLKAG 133 (447)
T ss_pred CCCCCC-HHHHHHHHCCCcEEeHHHHHHHhcC-CCEEEEeCCCchHHHHHHHHHHHHHC
Confidence 443320 00 0123356777665221111 11223668999999999999998764
|
|
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.018 Score=55.92 Aligned_cols=54 Identities=28% Similarity=0.258 Sum_probs=44.8
Q ss_pred ccccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 216 LFIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
+--+.|..|++..++ +.+.+++|++|+|-|.|+ ||..++.+|.+.|+.|+ |+.+
T Consensus 12 gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~ 70 (254)
T cd05313 12 IRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDS 70 (254)
T ss_pred CCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 445788888666554 568899999999999998 59999999999999877 7764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >PRK14805 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.18 Score=50.10 Aligned_cols=145 Identities=15% Similarity=0.193 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|.++.++. +.+. .-|.+.+.++-|..- +|+|.+--| .| ..++.+...-+ +
T Consensus 49 STRTR~SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~----~~~~~~a~~~~---v 116 (302)
T PRK14805 49 SLRTRVSFDIGINKLGGHCLYLD-QQNGALGKRESVADFAANLSCW--ADAIVARVF--SH----STIEQLAEHGS---V 116 (302)
T ss_pred CchHHHHHHHHHHHcCCcEEECC-CCcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--Ch----hHHHHHHHhCC---C
Confidence 44434456789999999988764 2221 235677777777764 889988765 32 23333322222 4
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.| .+...||=+.+ ++.+.++.| +++|++|+++|-+.-|.+.++.++...|++|++|+-.
T Consensus 117 PVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~ 188 (302)
T PRK14805 117 PVINAL-------CDLYHPCQALADFLTLAEQFG-DVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQI 188 (302)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhC-CcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHHH
Confidence 556652 22467998888 444445554 7999999999998888999999999999999999632
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv 289 (371)
+.++ +.++.||+|.+-+
T Consensus 189 ~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 189 VAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 2333 4588999998733
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0086 Score=52.20 Aligned_cols=72 Identities=29% Similarity=0.389 Sum_probs=47.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC-------c
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN-------M 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~-------~ 294 (371)
--+|.|||+|+ ||..++..|.+.|..|.-+.+++ .++.+.+++||++|-+++--. +
T Consensus 10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 35899999999 59999999999999988876553 355678999999999998532 1
Q ss_pred ccCCCcCCCeEEEEee
Q 017438 295 VRGSWIKPGAVIIDVG 310 (371)
Q Consensus 295 v~~d~ik~gavVIDvg 310 (371)
-....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 2223467888887654
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.018 Score=58.82 Aligned_cols=72 Identities=29% Similarity=0.404 Sum_probs=54.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------------------------CHHhhccCCcEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------------------NPEEITRQADII 285 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------------------~l~~~l~~ADIV 285 (371)
+|.|||.|.+ |.++|..|.+.|.+|++++++.. ++.+.++++|+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999885 99999999999999999976421 234457889999
Q ss_pred EEccCCCCc---------cc------CCCcCCCeEEEEeeec
Q 017438 286 ISAVGQPNM---------VR------GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 286 IsAvG~p~~---------v~------~d~ik~gavVIDvgin 312 (371)
|.+++.|.- +. ...+++|.+|||.+.-
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 999997631 11 1235788999988743
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.0098 Score=56.64 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=45.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCH-----------------HhhccCCcEEEEccCCCCc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l-----------------~~~l~~ADIVIsAvG~p~~ 294 (371)
++++|++|+|||.|.+ +.-=+..|++.||.|||+.-.- .++ .+.+..+++||.||+.+.+
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHH
Confidence 5677999999999985 7666778888999999985432 111 1347789999999987653
|
|
| >PRK08192 aspartate carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.15 Score=51.51 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=92.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhh
Q 017438 130 NKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G 206 (371)
+=..++.++|.++.++.=+++. ..|-+.+.++-|+.- +|+|.+--|-. -...++.+. -. +-.+|.|
T Consensus 61 SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~~~--~~~~~~a~~----~~---vPVINa~ 129 (338)
T PRK08192 61 SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDA--GSVKEFAEG----SR---VPVINGG 129 (338)
T ss_pred HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCCch--hHHHHHHHh----CC---CCEEECC
Confidence 5578899999998764212221 235677777777764 78999886532 222222222 12 3455642
Q ss_pred hhccCCCccccccCCHHH-HHHHHHHh---CCCCCCCEEEEEcCC--cccHHHHHHHhcc-CCCeEEEEeCC--------
Q 017438 207 RLAMRGREPLFIPCTPKG-CIELLHRY---GFDIKGKRAVVIGRS--NIVGMPAALLLQR-EDATVSIVHSR-------- 271 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~g-vi~lL~~~---~i~l~GK~vvVIG~s--~~VGkpla~lL~~-~gAtVtv~h~~-------- 271 (371)
. .+.+.||=+.+ ++.+.|+. |-+++|++|+++|-+ +-+...++..|.. .|++|++++-.
T Consensus 130 ~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~ 203 (338)
T PRK08192 130 D------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYV 203 (338)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHH
Confidence 1 13567998888 55555554 347999999999995 3357777766553 48999888632
Q ss_pred -------------CCCHHhhccCCcEEEEccC
Q 017438 272 -------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 272 -------------t~~l~~~l~~ADIVIsAvG 290 (371)
+.|+++.+++||||.+..+
T Consensus 204 ~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~~ 235 (338)
T PRK08192 204 ISDIENAGHKITITDQLEGNLDKADILYLTRI 235 (338)
T ss_pred HHHHHHcCCeEEEEcCHHHHHccCCEEEEcCc
Confidence 2577899999999998543
|
|
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.022 Score=57.19 Aligned_cols=74 Identities=22% Similarity=0.425 Sum_probs=55.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC-C-CeEEEEeCC---------------------CCCHHhhccCCcEEEEccCCC-C
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSR---------------------TKNPEEITRQADIIISAVGQP-N 293 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~-g-AtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG~p-~ 293 (371)
-+...|||+|.. ++.-...+... + -+|.|..++ ..+.++.++.|||||++|... .
T Consensus 130 a~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 130 ASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 467788888764 76655555432 2 367776654 246788999999999999853 4
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|.=+|-+
T Consensus 209 il~~~~l~~G~hI~aiGad 227 (330)
T COG2423 209 VLKAEWLKPGTHINAIGAD 227 (330)
T ss_pred eecHhhcCCCcEEEecCCC
Confidence 7899999999999999965
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.014 Score=63.73 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l-~~ADIVIsAvG~p~---~v~- 296 (371)
+-+.+++.|||.|.+ |..++..|.+.|.+|+++++.. .++.+.+ .+||+||.+++... ++.
T Consensus 49 ~~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~ 127 (667)
T PLN02712 49 NTTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKS 127 (667)
T ss_pred cCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHh
Confidence 345578999999885 9999999999999999887652 2344434 56999999998422 232
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
...+++|++|+|++.
T Consensus 128 l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 128 LPLQRLKRNTLFVDVLS 144 (667)
T ss_pred hhhhcCCCCeEEEECCC
Confidence 234789999999983
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.03 Score=55.87 Aligned_cols=90 Identities=26% Similarity=0.386 Sum_probs=66.5
Q ss_pred HHHHHHHHH----------hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------
Q 017438 223 KGCIELLHR----------YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------- 271 (371)
Q Consensus 223 ~gvi~lL~~----------~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------- 271 (371)
.+++..+.+ .+....+.+++++|.|-+ |-.++..-...|+-||-..-+
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 667777777 345778889999999765 887777666778776654311
Q ss_pred ---------C--------CCHHhhccCCcEEEEcc---C--CCCcccCCCc---CCCeEEEEeeecC
Q 017438 272 ---------T--------KNPEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 272 ---------t--------~~l~~~l~~ADIVIsAv---G--~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+ +-+.+++++.||||+.. | .|.+|+.+|+ |||++|+|+....
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~ 284 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAET 284 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhc
Confidence 0 12347899999999877 3 3567999886 9999999998653
|
|
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.021 Score=54.26 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=44.3
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 217 FIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 217 ~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
..|.|..|+...++ +.+.+++|++|+|.|.|+ ||+.++.+|.++|++|+ |+.+
T Consensus 6 ~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 6 REEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 34788888766655 557789999999999988 59999999999999987 7765
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.15 Score=52.41 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCCCCCCEEEEEcCC---------cccHHHHHHHhccCC-CeEEEEeCC-------------CCCHHhhccCCcEEEEcc
Q 017438 233 GFDIKGKRAVVIGRS---------NIVGMPAALLLQRED-ATVSIVHSR-------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~g-AtVtv~h~~-------------t~~l~~~l~~ADIVIsAv 289 (371)
+.+++||+|.|+|.+ +.-...++..|.++| +.|.+..-. ..++++.++.||+||..|
T Consensus 315 ~~~~~~~~v~vlGlafK~~t~d~r~Sp~~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 394 (415)
T PRK11064 315 DKRASEVKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLDGLVTLVSLDEALATADVLVMLV 394 (415)
T ss_pred ccCcCCCEEEEEeeEECCCCcchhhChHHHHHHHHHhcCCcEEEEECCCCCchhhhccCceeeCCHHHHHhCCCEEEECC
Confidence 667899999999953 223678899999996 999885422 135778899999999999
Q ss_pred CCCCcccCCC--cCCCeEEEE
Q 017438 290 GQPNMVRGSW--IKPGAVIID 308 (371)
Q Consensus 290 G~p~~v~~d~--ik~gavVID 308 (371)
..+.|-..+| ++. -+|||
T Consensus 395 ~~~~~~~~~~~~~~~-~~v~D 414 (415)
T PRK11064 395 DHSQFKAINGDNVHQ-QWVVD 414 (415)
T ss_pred CCHHhccCCHHHhCC-CEEEe
Confidence 9887743333 443 37777
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.018 Score=57.38 Aligned_cols=55 Identities=29% Similarity=0.389 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~ 291 (371)
|+||++.|||.|.+ |.+++..|.+.|.+|++..+.. .+..+.+++||+||.+++-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 58999999999996 9999999999998877654321 1355678999999999984
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK09414 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.059 Score=56.25 Aligned_cols=51 Identities=29% Similarity=0.256 Sum_probs=43.0
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 217 FIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 217 ~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-.+.|..|+...++ +.+.+++|++|+|.|.|+ ||..+|.+|.+.|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 44788888665554 568899999999999988 5999999999999998766
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.015 Score=53.85 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999988899999999999999999887653
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.016 Score=54.10 Aligned_cols=69 Identities=22% Similarity=0.332 Sum_probs=49.9
Q ss_pred EEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------CHHhhccCCcEEEEccCCCC
Q 017438 240 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK-------------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
++.||| .|. +|..++..|.+.|.+|++..++.. +..+.+.++|+||.++....
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 666 599999999999999998876421 23456789999999998543
Q ss_pred c---cc--CCCcCCCeEEEEee
Q 017438 294 M---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 294 ~---v~--~d~ik~gavVIDvg 310 (371)
+ +. ...++ +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 2 21 12233 47999984
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.013 Score=57.00 Aligned_cols=72 Identities=25% Similarity=0.332 Sum_probs=51.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH-------------------------------------HhhccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP-------------------------------------EEITRQ 281 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l-------------------------------------~~~l~~ 281 (371)
|+|.|||.|.+ |.++|..|+..|.+|++++++...+ .+.+++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD 83 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence 68999999886 9999999999999999997643111 135788
Q ss_pred CcEEEEccCC-CC----ccc--CCCcCCCeEEE-Eeee
Q 017438 282 ADIIISAVGQ-PN----MVR--GSWIKPGAVII-DVGI 311 (371)
Q Consensus 282 ADIVIsAvG~-p~----~v~--~d~ik~gavVI-Dvgi 311 (371)
||+||.++.- |. ++. .+.++++++++ |.+.
T Consensus 84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 9999999873 22 111 13567787775 5543
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.019 Score=60.12 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=53.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhhcc---CCcEEEEccCCCCc-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEITR---QADIIISAVGQPNM- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~l~---~ADIVIsAvG~p~~- 294 (371)
.++.|||.|.+ |.++|..|+++|.+|++++++. .++++.+. ++|+||..+..+..
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999886 9999999999999999998763 23444444 57988866554332
Q ss_pred ---cc--CCCcCCCeEEEEeeec
Q 017438 295 ---VR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDvgin 312 (371)
+. ...+++|.+|||.|..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 21 1346889999999854
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.018 Score=60.70 Aligned_cols=72 Identities=25% Similarity=0.386 Sum_probs=55.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhcc---CCcEEEEccCCCCcc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITR---QADIIISAVGQPNMV 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~---~ADIVIsAvG~p~~v 295 (371)
+|-+||-|.+ |.++|..|+++|.+|+++||+.. ++++.++ ++|+||+.+..+..+
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 6899999886 99999999999999999998631 2334444 499999988765532
Q ss_pred c------CCCcCCCeEEEEeeec
Q 017438 296 R------GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~------~d~ik~gavVIDvgin 312 (371)
+ ...+++|.++||.+..
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCC
Confidence 1 1346889999999976
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.0081 Score=50.95 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=49.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-Ce-EEEEeCCC---CCH-------------------HhhccCCcEEEEccCCC--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-AT-VSIVHSRT---KNP-------------------EEITRQADIIISAVGQP--N 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-At-Vtv~h~~t---~~l-------------------~~~l~~ADIVIsAvG~p--~ 293 (371)
||.|||+.|.+|+-+..+|.++- .+ +.++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988889999999998853 44 44443332 111 13468999999998741 1
Q ss_pred cccCCCcCCCeEEEEeeecC
Q 017438 294 MVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin~ 313 (371)
-+-+..++.|..|||.+...
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHhhCCcEEEeCCHHH
Confidence 12233478899999998655
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.043 Score=56.66 Aligned_cols=120 Identities=23% Similarity=0.183 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCcccHHH-HHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCeEEEEeeecC
Q 017438 236 IKGKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINP 313 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkp-la~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgin~ 313 (371)
.++|++.|+|.|+. |+. +|.+|.++|++|++++.+.....+.+++..+.+.. |.+ .+.+ ....+|+--|+++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 46899999999997 999 79999999999999987543222223333333322 211 1112 1234555555544
Q ss_pred CCCCC---CCCCceeecccchhh-hhh--hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 314 VEDAK---SPRGYRLVGDVCYEE-ACE--VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 314 ~~~~~---~~~g~kl~GDVd~~~-v~~--~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
....- ...|-++.++.++-. ..+ +.-+ |-|=-|.-|+..|+.++++.+
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I~---ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFRTSIA---VAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEEE---EECCCCHHHHHHHHHHHHHhc
Confidence 21000 012336788877632 211 2223 558889999999999999765
|
|
| >PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.35 Score=49.86 Aligned_cols=167 Identities=17% Similarity=0.207 Sum_probs=103.9
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCC---CCCCCHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPL---PCHIDEQS 186 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPL---p~~i~~~~ 186 (371)
++++.++-+ .|..=--+=..++.++|.++.++.-.+. ..-|-+.+.++-|+.- +|+|.+--|- ..|-..++
T Consensus 60 ~~~~~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e 135 (395)
T PRK07200 60 GLGISVFRD--NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE 135 (395)
T ss_pred CeEEEEEcC--CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence 344334432 3444444567889999999887643210 1125577777777764 8899998764 22211222
Q ss_pred HHhhCCc--cccc-CccC-cchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEEc-------CCcccHH
Q 017438 187 ILNAVSM--EKDV-DGFH-PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVIG-------RSNIVGM 252 (371)
Q Consensus 187 i~~~I~p--~KDV-Dgl~-~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVIG-------~s~~VGk 252 (371)
+.+...- .++| -..- .+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++| ++..|.+
T Consensus 136 la~~~~~~~~~~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~ 208 (395)
T PRK07200 136 VGAAVDDGYKQGVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ 208 (395)
T ss_pred HHHHhhhhcccccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence 2222110 0111 1222 35642 23567998888 5666666664 38999999986 3446788
Q ss_pred HHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 253 PAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 253 pla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
.++.+|...|++|++++-. +.|+++.+++||+|.+-+
T Consensus 209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 9999989999999998633 256778999999999753
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.028 Score=52.91 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|++..++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5789999999999889999999999999999987654
|
|
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.018 Score=55.30 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=51.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCCc----c
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM----V 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~~----v 295 (371)
++.|||.|.+ |..++..|.+.| .+|++++++. .+.++.+.++|+||.++. |.. +
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~-p~~~~~vl 79 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK-PLDIYPLL 79 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC-HHHHHHHH
Confidence 5899999885 999999999887 3789988752 244556789999999984 332 2
Q ss_pred c--CCCcCCCeEEEEee
Q 017438 296 R--GSWIKPGAVIIDVG 310 (371)
Q Consensus 296 ~--~d~ik~gavVIDvg 310 (371)
+ ...++++.+||++.
T Consensus 80 ~~l~~~l~~~~~iis~~ 96 (273)
T PRK07680 80 QKLAPHLTDEHCLVSIT 96 (273)
T ss_pred HHHHhhcCCCCEEEEEC
Confidence 1 13467788999987
|
|
| >PRK14030 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.086 Score=55.03 Aligned_cols=51 Identities=31% Similarity=0.315 Sum_probs=42.8
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 217 FIPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 217 ~~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-.+.|..|++.. +++.+.+++|++|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus 203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVav 257 (445)
T PRK14030 203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVTI 257 (445)
T ss_pred CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 346799986654 45678899999999999988 5999999999999997773
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.041 Score=54.67 Aligned_cols=55 Identities=25% Similarity=0.452 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC--------------------------CCCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~--------------------------t~~l~~~l~~ADIVIsA 288 (371)
++.++|+|||+|. ||..++..|+..| +++.+++.+ +.+++ .+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 4678999999976 5999999999888 688877642 13444 78999999999
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|.|
T Consensus 81 ag~~ 84 (319)
T PTZ00117 81 AGVQ 84 (319)
T ss_pred CCCC
Confidence 9764
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.031 Score=54.23 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=53.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------------------------CCCHHhhc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------------------------TKNPEEIT 279 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------------------------------t~~l~~~l 279 (371)
++|.|||+|.+ |..+|..|++.|.+|+++.+. +.++++.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999999775 999999999999999998653 23556678
Q ss_pred cCCcEEEEccCCCC-----ccc--CCCcCCCeEEEEeee
Q 017438 280 RQADIIISAVGQPN-----MVR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 ~~ADIVIsAvG~p~-----~v~--~d~ik~gavVIDvgi 311 (371)
++||+||.+++..- ++. ...+++++++.+...
T Consensus 83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntS 121 (287)
T PRK08293 83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSS 121 (287)
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECcc
Confidence 99999999998431 111 134677887766443
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.03 Score=53.05 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-C---------------------CHHhhccCCcEEEEccCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K---------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~---------------------~l~~~l~~ADIVIsAvG~ 291 (371)
..++||+++|.|+|+-+|+.++..|+++|++|+++.++. . ++.+...+.|++|+.+|.
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 356899999999998889999999999999998876543 1 122344567888877774
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.034 Score=50.88 Aligned_cols=57 Identities=21% Similarity=0.316 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CH----H---hhccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NP----E---EITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l----~---~~l~~ADIVIsAvG~ 291 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. |+ + +.....|+||..+|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 478999999999998999999999999999998876421 11 1 123457888887774
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.022 Score=53.38 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++|++++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~ 39 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA 39 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988899999999999999999987653
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.022 Score=66.80 Aligned_cols=75 Identities=20% Similarity=0.272 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCcc-----cC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMV-----RG 297 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v-----~~ 297 (371)
.+++|-+||.|.+ |.++|..|++.|.+|++.+++. .+..+..+++|+||+.+..+.-+ ..
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4678999999986 9999999999999999998863 35668889999999998865522 11
Q ss_pred ----CCcCCCeEEEEeeec
Q 017438 298 ----SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 ----d~ik~gavVIDvgin 312 (371)
+.+++|.++||+++.
T Consensus 82 ~g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hhHHhcCCCcCEEEECCCC
Confidence 235789999999865
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.042 Score=54.60 Aligned_cols=55 Identities=20% Similarity=0.387 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCCC-----------------------CHHhhccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK-----------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t~-----------------------~l~~~l~~ADIVIsAvG~ 291 (371)
.+++|.|||+|. ||..++..|+.+|. ++.+++.+.. +-.+.+++|||||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 578999999977 69999999998885 6777765321 123568999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 5
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.027 Score=49.70 Aligned_cols=51 Identities=25% Similarity=0.347 Sum_probs=43.1
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l~~~l~~ADIVIsAvG~ 291 (371)
|+|+|+++.+|+.++..|+++|.+|+..-|+.. .+.+.++.+|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689999888999999999999999999877632 234667899999998884
|
... |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.052 Score=54.07 Aligned_cols=93 Identities=19% Similarity=0.267 Sum_probs=62.6
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~ 277 (371)
+|.....+..+...+..-.|++|+|.|.|. +|..+++++...|++|+++...... +.+
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 243 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA 243 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence 444444555565555444799999999876 6999999999999987765432211 112
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
.+..+|+||.++|.+..+. -+.+++|..++.+|..
T Consensus 244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 2234799999998765332 2457888888888864
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.039 Score=51.36 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999889999999999999999888764
|
|
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.022 Score=59.24 Aligned_cols=113 Identities=14% Similarity=0.225 Sum_probs=68.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-CCCH-----------------HhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-TKNP-----------------EEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-t~~l-----------------~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ +.-=+..|++.||.|||+... ++++ .+.+..+++||.||+.+.+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 6899999999999985 766677888899999998433 1112 2457789999999987653
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTL 361 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v 361 (371)
|-.+ -+..-+.+++.-++. .+|+-|.++.+. .-+|+ -+|-.|..+..|-+++-
T Consensus 87 ~~i~~~-a~~~~~lvN~~d~~~-----------~~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie 144 (457)
T PRK10637 87 QRVSEA-AEARRIFCNVVDAPK-----------AASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_pred HHHHHH-HHHcCcEEEECCCcc-----------cCeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 2111 122224455553332 123333332222 22343 36788887777655443
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.035 Score=57.41 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.+|+|.|+|.|.. |+++|.+|.++|++|+++..+
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999997 999999999999999999865
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.017 Score=53.04 Aligned_cols=53 Identities=32% Similarity=0.429 Sum_probs=35.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------------CCCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------------t~~l~~~l~~ADI 284 (371)
++|+|+|.|- ||-|+|..|++.|.+|+.+..+ +.+.++.+++||+
T Consensus 1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 4799999988 5999999999999999999643 2344566777888
Q ss_pred EEEccCCC
Q 017438 285 IISAVGQP 292 (371)
Q Consensus 285 VIsAvG~p 292 (371)
+|.+++.|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88777755
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.023 Score=55.12 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=49.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||.|.+ |.++|..|+..|.+|++.+++. .++ +.+.
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 82 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLA 82 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhc
Confidence 68999999886 9999999999999999987642 122 3467
Q ss_pred CCcEEEEccCCCCc-----cc--CCCcCCCeEEE
Q 017438 281 QADIIISAVGQPNM-----VR--GSWIKPGAVII 307 (371)
Q Consensus 281 ~ADIVIsAvG~p~~-----v~--~d~ik~gavVI 307 (371)
+||+||.+++...- +. ...++++++++
T Consensus 83 ~aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~ 116 (292)
T PRK07530 83 DCDLVIEAATEDETVKRKIFAQLCPVLKPEAILA 116 (292)
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEE
Confidence 89999999975321 21 13467788776
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.043 Score=51.87 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 224 GCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 224 gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
++.+.+++.+.+++|++|+|.|.|+ ||+.++..|.++|+ .|.++.++.
T Consensus 9 ~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 9 AMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3455566778899999999999988 59999999999987 577776543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.038 Score=57.12 Aligned_cols=53 Identities=26% Similarity=0.332 Sum_probs=44.3
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeCC
Q 017438 218 IPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 271 (371)
Q Consensus 218 ~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~~ 271 (371)
.+.|..|+... +++++.+++|++|+|.|.|+ ||+.++.+|.++|+.|+ |+.++
T Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 182 EAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 47788886554 45678899999999999988 59999999999999877 77654
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.23 Score=52.19 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=56.7
Q ss_pred HhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCCC-----------------------------
Q 017438 231 RYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRT----------------------------- 272 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~t----------------------------- 272 (371)
.+.-+++|++|.|+|.+ +.-...++..|.++|++|.+..-.-
T Consensus 317 ~l~~~~~~~~VavlGlafK~~tdD~R~Spa~~li~~L~~~G~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (473)
T PLN02353 317 SMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTA 396 (473)
T ss_pred HhhcccCCCEEEEEeeeecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChHHHHHHhhccccccccccccccccccc
Confidence 33346899999999952 2236789999999999999875331
Q ss_pred -------CCHHhhccCCcEEEEccCCCCcccCCC------cCCCeEEEEee
Q 017438 273 -------KNPEEITRQADIIISAVGQPNMVRGSW------IKPGAVIIDVG 310 (371)
Q Consensus 273 -------~~l~~~l~~ADIVIsAvG~p~~v~~d~------ik~gavVIDvg 310 (371)
.++.+.+++||+||.++..+.|-..+| +++..+|||.-
T Consensus 397 ~~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m~~~~~viD~r 447 (473)
T PLN02353 397 VKQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNMQKPAFVFDGR 447 (473)
T ss_pred ccceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhccCCCEEEECC
Confidence 022467899999999999887632222 34445899943
|
|
| >PRK04523 N-acetylornithine carbamoyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.27 Score=49.54 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=97.2
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--------------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCC-----
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--------------TSEQEVLKHISVFNDDPSVHGILVQLPLPCHID----- 183 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--------------v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~----- 183 (371)
.|..---.=..++.++|-++.++.-... ...|.+.+.+.-|+.- +++|.+-.|-.. .+
T Consensus 48 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~ 124 (335)
T PRK04523 48 PSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFELGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDR 124 (335)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCcccccchhhcccccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccch
Confidence 3444444567889999999887643321 1236677777777764 788888865221 11
Q ss_pred HHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCC-CCCEEEEEcCC------cccHHHHHH
Q 017438 184 EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI-KGKRAVVIGRS------NIVGMPAAL 256 (371)
Q Consensus 184 ~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l-~GK~vvVIG~s------~~VGkpla~ 256 (371)
....++.+...-+ +-.+|. + .. +.||=+.+=+-.++++...+ +|++++|++.| .-|.+.++.
T Consensus 125 ~~~~~~~~a~~s~---vPVINa-----~--~~-~HPtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~ 193 (335)
T PRK04523 125 QDQVLNSFAKYST---VPVINM-----E--TI-THPCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALL 193 (335)
T ss_pred hHHHHHHHHHhCC---CCEEEC-----C--CC-CChHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHH
Confidence 1223333333222 344564 2 23 77998888444444433458 89999887643 236888888
Q ss_pred HhccCCCeEEEEeC-C-------------------------CCCHHhhccCCcEEEEcc
Q 017438 257 LLQREDATVSIVHS-R-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 257 lL~~~gAtVtv~h~-~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
++...|++|++|+- . +.++++.+++||+|.+-.
T Consensus 194 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 194 IATRLGMDVTLLCPTPDYILDERYMDWAEQNAAESGGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred HHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEece
Confidence 89999999999975 2 246678899999998644
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.021 Score=55.46 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=28.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|.|||+|.+ |.++|..|++.|..|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999885 999999999999999999764
|
|
| >PRK06199 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.035 Score=56.67 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=52.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhcc-C-C-CeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQR-E-D-ATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~-~-g-AtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
-+++.|||.|.- ++.-...+.. + + -+|.+.+++. .+.++.+++|||||++|+.
T Consensus 155 a~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s 233 (379)
T PRK06199 155 SKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSG 233 (379)
T ss_pred CCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCC
Confidence 467777777765 7666555544 2 2 3677766541 3467889999999999974
Q ss_pred C-------CcccCCCcCCCeEEEEeeecC
Q 017438 292 P-------NMVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 292 p-------~~v~~d~ik~gavVIDvgin~ 313 (371)
. .++..+|+|||+.|+=+|...
T Consensus 234 ~~~~~s~~Pv~~~~~lkpG~hv~~ig~~e 262 (379)
T PRK06199 234 ETGDPSTYPYVKREWVKPGAFLLMPAACR 262 (379)
T ss_pred CCCCCCcCcEecHHHcCCCcEEecCCccc
Confidence 2 368999999999998777543
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.019 Score=60.05 Aligned_cols=71 Identities=25% Similarity=0.280 Sum_probs=52.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CHHhh---ccCCcEEEEccCCCCc---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEI---TRQADIIISAVGQPNM--- 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l~~~---l~~ADIVIsAvG~p~~--- 294 (371)
++.|||.|.+ |.++|..|+++|.+|++.+++.. ++++. +.++|+||..+.....
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3779999886 99999999999999999987631 22222 3468988888765432
Q ss_pred -cc--CCCcCCCeEEEEeee
Q 017438 295 -VR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 295 -v~--~d~ik~gavVIDvgi 311 (371)
+. ...+++|.+|||.|.
T Consensus 80 Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred HHHHHHhhCCCCCEEEECCC
Confidence 21 135688999999995
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.08 Score=52.64 Aligned_cols=140 Identities=20% Similarity=0.274 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNI 205 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~ 205 (371)
+=.-++..+|-+..++.= +-+ .|-+.+.-+-|.. =++||.+--. .| ..++.+.-.-. +-..|
T Consensus 61 SFeva~~qlGg~~~~l~~--~~~Qlgr~Esi~DTArVLsr--~~D~I~~R~~--~~----~~ve~lA~~s~---VPViN- 126 (310)
T COG0078 61 SFEVAATQLGGHAIYLGP--GDSQLGRGESIKDTARVLSR--MVDAIMIRGF--SH----ETLEELAKYSG---VPVIN- 126 (310)
T ss_pred hHHHHHHHcCCCeEEeCC--CccccCCCCcHHHHHHHHHh--hhheEEEecc--cH----HHHHHHHHhCC---CceEc-
Confidence 345677889999877542 221 1334444444444 2889987643 22 22333322222 22233
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------- 271 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------- 271 (371)
+.++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+.......|..|+++.-+
T Consensus 127 ------gLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~~ 200 (310)
T COG0078 127 ------GLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKE 200 (310)
T ss_pred ------ccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHHH
Confidence 236678899999955555555445999999999999999999988888899999998532
Q ss_pred -----------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------t~~l~~~l~~ADIVIsAv 289 (371)
|.|..+..+.||+|.+-+
T Consensus 201 ~a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 201 NAKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred HHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 468889999999999654
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.038 Score=57.52 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcC-CCeEEEEeeecC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK-PGAVIIDVGINP 313 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik-~gavVIDvgin~ 313 (371)
.+.+|+|+|+|.|++ |++++.+|.++|++|++++++.....+.+.+..|.+.. |.- ..+++. ...+|+-=|+++
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~---~~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADIS-TAE---ASDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEe-CCC---chhHhcCCCEEEeCCCCCC
Confidence 468999999999997 99999999999999999986532222222222222211 100 011221 234444444443
Q ss_pred CCCCC----CCCCceeecccchhhhhh------hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 314 VEDAK----SPRGYRLVGDVCYEEACE------VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 314 ~~~~~----~~~g~kl~GDVd~~~v~~------~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.. +- ...|-++.|++++..... ....+--|-|=.|.-|+.-|+.++++..
T Consensus 87 ~~-p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 87 DS-PLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CC-HHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 21 00 012335777776521110 0111223568899999999999998764
|
|
| >PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.064 Score=55.75 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCeEEEEeeecCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINPVE 315 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgin~~~ 315 (371)
.||+|+|+|.|.. |++++.+|. +|++|++...+.....+.-..-+..+ .|. + +.+.+ ....+|+-=|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999997 999999998 59999999855432221100001111 111 0 00111 123444444444320
Q ss_pred CCC----CCCCceeecccchhh-hhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 316 DAK----SPRGYRLVGDVCYEE-ACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 316 ~~~----~~~g~kl~GDVd~~~-v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
+- ...|-++++++++-. ..+ ...+--|-|--|.-|+.-|+.++++.+
T Consensus 78 -p~~~~a~~~gi~v~~e~el~~~~~~-~~~~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 -EIVKIAKNFNIPITSDIDLLFEKSK-NLKFIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred -HHHHHHHHCCCceecHHHHHHHHhc-CCCEEEEECCCcHHHHHHHHHHHHHhc
Confidence 00 012336888887632 111 111223668899999999999998764
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.04 Score=53.75 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=43.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------------CCHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------KNPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------------~~l~~~l~~ADIV 285 (371)
++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++++|+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999885 9999999999999999987532 2344567899999
Q ss_pred EEccCCC
Q 017438 286 ISAVGQP 292 (371)
Q Consensus 286 IsAvG~p 292 (371)
|.++...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9998753
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.031 Score=65.61 Aligned_cols=74 Identities=22% Similarity=0.273 Sum_probs=59.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-cC-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-RG- 297 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~~- 297 (371)
.++|.+||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||++++.|.. + ..
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 378999999986 9999999999999999998752 3556778999999999986652 2 11
Q ss_pred ---CCcCCCeEEEEeeec
Q 017438 298 ---SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 ---d~ik~gavVIDvgin 312 (371)
+.+++|.++||+++.
T Consensus 403 g~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTV 420 (1378)
T ss_pred hHHhcCCCCCEEEECCCC
Confidence 235789999998763
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.03 Score=53.28 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=49.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVRG 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~~ 297 (371)
++.|||.|.+ |.+++..|.+.|. .+.+++++. .+..+.++++|+||.++.... ++..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 5889999886 9999999988774 356676541 245566789999999998322 2333
Q ss_pred CCcCCCeEEEEee
Q 017438 298 SWIKPGAVIIDVG 310 (371)
Q Consensus 298 d~ik~gavVIDvg 310 (371)
-++++|.+||++.
T Consensus 81 l~~~~~~~vis~~ 93 (258)
T PRK06476 81 LRFRPGQTVISVI 93 (258)
T ss_pred hccCCCCEEEEEC
Confidence 3467888888866
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.039 Score=50.34 Aligned_cols=49 Identities=31% Similarity=0.472 Sum_probs=38.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------------------------------CCCHHhhccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITRQ 281 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------------------------t~~l~~~l~~ 281 (371)
+|.|||+|.+ |+.+|.+++..|..|+++..+ +.++++.. +
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 6899999875 999999999999999999754 24666666 9
Q ss_pred CcEEEEccC
Q 017438 282 ADIIISAVG 290 (371)
Q Consensus 282 ADIVIsAvG 290 (371)
||+||=++.
T Consensus 79 adlViEai~ 87 (180)
T PF02737_consen 79 ADLVIEAIP 87 (180)
T ss_dssp ESEEEE-S-
T ss_pred hheehhhcc
Confidence 999998875
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.022 Score=53.09 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=36.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
+++||+++|.|+|.-+|+.++..|.++|++|.++.|+...+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l 42 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL 42 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 57899999999999999999999999999999998765443
|
|
| >COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.083 Score=55.22 Aligned_cols=124 Identities=22% Similarity=0.307 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH--HhhccCCcEEEEccCCCCcccCCCcCC-CeEEEEeeec
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--EEITRQADIIISAVGQPNMVRGSWIKP-GAVIIDVGIN 312 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l--~~~l~~ADIVIsAvG~p~~v~~d~ik~-gavVIDvgin 312 (371)
+.||+|+|+|-|.. |++++..|.++|+.|+++..+.... +..-...+-|=...|. +.. +|... ..+|..=|+.
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence 45999999999998 9999999999999999998654330 0110001111111121 011 22222 3444444444
Q ss_pred CCCCC----CCCCCceeecccchhhhh-hhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 313 PVEDA----KSPRGYRLVGDVCYEEAC-EVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 313 ~~~~~----~~~~g~kl~GDVd~~~v~-~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
+.. | -...|-++.||++.-.-. ..+-++ -|-|==|.-|+..|+.++++++-
T Consensus 81 ~~~-p~v~~A~~~gi~i~~dieL~~r~~~~~p~v-aITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTH-PLVEAAKAAGIEIIGDIELFYRLSGEAPIV-AITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCC-HHHHHHHHcCCcEEeHHHHHHHhcCCCCEE-EEECCCchHHHHHHHHHHHHhcC
Confidence 321 1 011344789998743211 012222 24477789999999999998864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.031 Score=50.71 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 46899999999999999999999999999999988754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.041 Score=53.18 Aligned_cols=41 Identities=37% Similarity=0.445 Sum_probs=35.8
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
....++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~ 74 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE 74 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35567899999999988889999999999999999987753
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.045 Score=57.29 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH----------------hhccCCcEEEEccCCCCcccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE----------------EITRQADIIISAVGQPNMVRGSW 299 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~----------------~~l~~ADIVIsAvG~p~~v~~d~ 299 (371)
+.||+|+|+|.|.. |++++.+|..+|++|+++......++ +.++++|+||.+.|.|.--+ .
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~~~p--~ 86 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRPTAP--V 86 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCCCCH--H
Confidence 37899999999997 99999999999999999986432222 22334555555555432100 0
Q ss_pred cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 300 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 300 ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~------a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++. . ...|-+++|++++-..... ...+--|-|-.|.-|+.-|+.++++.+
T Consensus 87 ~~~-------a--------~~~gi~v~~~iel~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~ 142 (488)
T PRK03369 87 LAA-------A--------AAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAA 142 (488)
T ss_pred HHH-------H--------HHCCCcEeeHHHHhhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 000 0 0012356676665210100 001112558899999999999998764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.03 Score=52.09 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.+.+++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~ 44 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP 44 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 57899999999988899999999999999999887753
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.022 Score=52.90 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~ 53 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDD 53 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecC
Confidence 578999999999995 9999999999996 7888853
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.051 Score=55.99 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
...++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999999999999999999999999999887654
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.055 Score=53.22 Aligned_cols=69 Identities=23% Similarity=0.403 Sum_probs=51.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------------------CCHHhhccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------------------~~l~~~l~~ADIVIsA 288 (371)
.+|.|||.|.+ |.++|..|.+.|.+|+++.+.. .+. +.+..+|+||.+
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~ 80 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVT 80 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEE
Confidence 47999999885 9999999999999999987641 112 345789999999
Q ss_pred cCCCCc---cc--CCCcCCCeEEEEe
Q 017438 289 VGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 289 vG~p~~---v~--~d~ik~gavVIDv 309 (371)
+..+.. +. ...++++.+|+++
T Consensus 81 vk~~~~~~~~~~l~~~~~~~~iii~~ 106 (341)
T PRK08229 81 VKSAATADAAAALAGHARPGAVVVSF 106 (341)
T ss_pred ecCcchHHHHHHHHhhCCCCCEEEEe
Confidence 976543 11 1245778889888
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.12 Score=52.27 Aligned_cols=112 Identities=22% Similarity=0.287 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CCCe---EEEEeCCC----------C-------CHHhhccCCcEEEEccCCCC--
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-EDAT---VSIVHSRT----------K-------NPEEITRQADIIISAVGQPN-- 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~gAt---Vtv~h~~t----------~-------~l~~~l~~ADIVIsAvG~p~-- 293 (371)
++.+|.|||+++.||+-+..+|.+ .+.. +..+.+.. + +. +...+.|+++.|+|.--
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~-~~~~~~Divf~a~~~~~s~ 82 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKI-NSFEGVDIAFFSAGGEVSR 82 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCH-HHhcCCCEEEECCChHHHH
Confidence 456899999999999999999984 5555 55554431 1 11 23478999999987421
Q ss_pred cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHH
Q 017438 294 MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amL 356 (371)
-+-+...+.|++|||.+-.+.-++.-+ =.+-.|..+.+.+..+.+ ..|| -.|++|+
T Consensus 83 ~~~~~~~~~G~~VID~Ss~fR~~~~vp---lvvPEvN~e~i~~~~~iI-anPn---C~tt~~~ 138 (347)
T PRK06728 83 QFVNQAVSSGAIVIDNTSEYRMAHDVP---LVVPEVNAHTLKEHKGII-AVPN---CSALQMV 138 (347)
T ss_pred HHHHHHHHCCCEEEECchhhcCCCCCC---eEeCCcCHHHHhccCCEE-ECCC---CHHHHHH
Confidence 122233467999999997764332111 234445545544422433 4675 5666666
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.083 Score=51.89 Aligned_cols=85 Identities=19% Similarity=0.312 Sum_probs=58.6
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHHhhcc---CC
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEEITR---QA 282 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~~~l~---~A 282 (371)
+..+++.+. ..|++|+|+|+|. +|..+++++...|+ .|+++.+. ..++.+.++ ..
T Consensus 159 ~~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~ 236 (343)
T PRK09880 159 IHAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYF 236 (343)
T ss_pred HHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCC
Confidence 333444443 3799999999865 69999999999998 56665432 122333322 37
Q ss_pred cEEEEccCCCCcc--cCCCcCCCeEEEEeeec
Q 017438 283 DIIISAVGQPNMV--RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 283 DIVIsAvG~p~~v--~~d~ik~gavVIDvgin 312 (371)
|++|.++|.+..+ --+.+++|..++.+|..
T Consensus 237 D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 237 DVSFEVSGHPSSINTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 9999999986543 23568899999999964
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.039 Score=52.21 Aligned_cols=52 Identities=27% Similarity=0.425 Sum_probs=42.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------CHHhh-ccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------NPEEI-TRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------~l~~~-l~~ADIVIsAvG~ 291 (371)
++++|+|.|. +|..+|..|.++|.+|++..+... -|++. +.+||++|.+||.
T Consensus 1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 5799999998 499999999999999999875521 13444 7889999999986
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.028 Score=52.24 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=35.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
...++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~ 45 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA 45 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence 3468999999999999999999999999999999998764
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.035 Score=56.70 Aligned_cols=76 Identities=16% Similarity=0.277 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCC---------------C------CHH-hhccCCcEEEEccCCC-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT---------------K------NPE-EITRQADIIISAVGQP- 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t---------------~------~l~-~~l~~ADIVIsAvG~p- 292 (371)
..++|.|+|++|.+|+-+..+|.++ +.+|+...+.. . +++ +.++++|+||.|.|.-
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5579999999999999999999988 67888775431 0 111 1247799999999852
Q ss_pred --CcccCCCcCCCeEEEEeeecCC
Q 017438 293 --NMVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 293 --~~v~~d~ik~gavVIDvgin~~ 314 (371)
++++. + +.|..|||++-...
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 23443 3 67899999997654
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.088 Score=52.48 Aligned_cols=56 Identities=27% Similarity=0.385 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC--------------------------CCCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~--------------------------t~~l~~~l~~ADIVIsA 288 (371)
++.++|+|||+|. ||..++..|+..| ++|.+.+.. +.++ +.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 4558999999977 5999999998888 477777543 1344 578999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 82 ag~~~ 86 (321)
T PTZ00082 82 AGLTK 86 (321)
T ss_pred CCCCC
Confidence 98653
|
|
| >COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.52 Score=48.70 Aligned_cols=160 Identities=21% Similarity=0.280 Sum_probs=101.3
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCC---C---CCHHHHHhhCCcccccCccC
Q 017438 128 VRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC---H---IDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 128 v~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~---~---i~~~~i~~~I~p~KDVDgl~ 201 (371)
++--...|+++||+ +.+.|+..|.-|. +++.+|=|. | +|.-.+ -.-+++..... .
T Consensus 229 aNElali~~~~GId--------------vwevIeaAnt~P~---~~~~~PGpGvGGHCIpvDP~fl-~~ka~~yg~~~-r 289 (436)
T COG0677 229 ANELALICNAMGID--------------VWEVIEAANTKPR---VNIFYPGPGVGGHCIPVDPYFL-TWKAPEYGLPA-R 289 (436)
T ss_pred HHHHHHHHHHhCCc--------------HHHHHHHhccCCc---eeecCCCCCCCCcccccCchhe-eecccccCCch-H
Confidence 44456677888876 5568888999886 778888764 2 333222 22222222211 1
Q ss_pred cchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC-
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~- 271 (371)
..-+.+.. ++..+.| ...-+.+.|.+.+..++|.+|+|+|-. +.=...+..+|.+.|++|.++.-+
T Consensus 290 lI~tAreI-N~~mP~~---Vv~~~~~al~~~~k~~~~skIlvlGlayK~dvdD~ReSPa~~ii~~l~~~g~~v~~~DP~v 365 (436)
T COG0677 290 LIRTAREI-NDSMPRH---VVDRVKEALNKAGKPLSGSKILVLGLAYKGDVDDLRESPALDIIELLEEWGGEVLVYDPYV 365 (436)
T ss_pred HHHHHHHH-hccCCHH---HHHHHHHHHHHcCCCCcCceEEEEEeeecCCCcccccCchHHHHHHHHHhCCeEEEECCCC
Confidence 11122222 1222222 123355566689999999999999942 122456788899999999988532
Q ss_pred ------------C-CCHHhhccCCcEEEEccCCCCc--ccCCCcC-CCeEEEEee
Q 017438 272 ------------T-KNPEEITRQADIIISAVGQPNM--VRGSWIK-PGAVIIDVG 310 (371)
Q Consensus 272 ------------t-~~l~~~l~~ADIVIsAvG~p~~--v~~d~ik-~gavVIDvg 310 (371)
+ ..+++.++++|+||.+|-...| ++.+.+. ...+|+|.-
T Consensus 366 ~~~~~~~~~~~~~~~~~e~al~~~D~vVi~tDH~~fk~id~~~i~~~~~vivDtr 420 (436)
T COG0677 366 KELPTREDGEGVTLAILEEALKDADAVVIATDHSEFKEIDYEAIGKEAKVIVDTR 420 (436)
T ss_pred CcchhhhhccccchhhHHHHhccCCEEEEEeccHHhhcCCHHHhccCCcEEEECc
Confidence 2 4677899999999999988776 7766664 467888854
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.07 Score=51.15 Aligned_cols=53 Identities=26% Similarity=0.346 Sum_probs=41.6
Q ss_pred EEEEcCCcccHHHHHHHhccCC----CeEEEEeCC-------------------------CCCHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED----ATVSIVHSR-------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|||+|+.+|..++..|+..| .+|++++.+ +.|+++.+++||+||.++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799996678999999988888 577777532 24567889999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 53
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.06 Score=49.41 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 4679999999998888999999999999998887654
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.024 Score=53.43 Aligned_cols=77 Identities=21% Similarity=0.409 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC------------------------------------------
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR------------------------------------------ 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~------------------------------------------ 271 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++..
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 578899999999995 9999999999996 78777321
Q ss_pred -----CCCHHhhccCCcEEEEccCCCCc---ccCCCcCCCeEEEEeeec
Q 017438 272 -----TKNPEEITRQADIIISAVGQPNM---VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 272 -----t~~l~~~l~~ADIVIsAvG~p~~---v~~d~ik~gavVIDvgin 312 (371)
..++.+.++++|+||.++..+.. +..-..+.+.-+|+.|+.
T Consensus 97 ~~~i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~~ 145 (228)
T cd00757 97 NERLDAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAVL 145 (228)
T ss_pred cceeCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 01234567889999999886542 322223345556666543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.045 Score=50.29 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|+++|+|+++-+|+.++..|+++|++|++..|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999899999999999999999988764
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.08 Score=49.55 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999887654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.038 Score=51.69 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~ 42 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE 42 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468999999999998899999999999999999887653
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.071 Score=50.90 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC-----------------CCH----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-----------------KNP----E 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t-----------------~~l----~ 276 (371)
+|....++..+++.+. ..|++|+|+|.|. +|..+++++...|++ |+++.+.. .+. .
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~ 180 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG 180 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence 4433444555555544 3899999999976 699999999999986 77664321 111 1
Q ss_pred hhc--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EIT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+ +.+|++|-++|.+..+. -+.++++..++.+|..
T Consensus 181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence 112 34899999999776432 3567888889999953
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.059 Score=50.31 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45889999999999999999999999999999888665
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.042 Score=52.01 Aligned_cols=38 Identities=29% Similarity=0.403 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 45899999999998888999999999999999998765
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.035 Score=51.64 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~ 43 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA 43 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 57899999999999999999999999999999988763
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.036 Score=51.43 Aligned_cols=38 Identities=32% Similarity=0.446 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.+..|+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999999999999999999999999887763
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.054 Score=49.94 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 5789999999998889999999999999999887654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.048 Score=51.09 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999888999999999999999998765
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.068 Score=50.51 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999999989999999999999999888654
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.047 Score=50.30 Aligned_cols=37 Identities=30% Similarity=0.466 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4789999999999999999999999999999888665
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.075 Score=52.12 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=43.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||.|-+ |.++|..|+++|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 47999998775 9999999999999999997652 24446678
Q ss_pred CCcEEEEccCCC
Q 017438 281 QADIIISAVGQP 292 (371)
Q Consensus 281 ~ADIVIsAvG~p 292 (371)
++|+||.+++..
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 999999998753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.047 Score=50.82 Aligned_cols=38 Identities=34% Similarity=0.479 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL 43 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999988889999999999999999887653
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.053 Score=59.23 Aligned_cols=73 Identities=30% Similarity=0.360 Sum_probs=55.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~- 296 (371)
++|.|||.|.+ |..++..|.+.| ..|++++++. .++.+.+.++|+||.+++... .+.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 68999999885 999999999888 4788887652 245566889999999998432 121
Q ss_pred -CCCcCCCeEEEEeeec
Q 017438 297 -GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 -~d~ik~gavVIDvgin 312 (371)
...++++.+|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1346788999999853
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.057 Score=50.23 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++++||+++|.|+++-+|+.++..|+++|+.|.++.+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 467999999999999989999999999999998887654
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.13 Score=51.81 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---------------CCH-HhhccCCcEEEEccCCCCc--c
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNP-EEITRQADIIISAVGQPNM--V 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---------------~~l-~~~l~~ADIVIsAvG~p~~--v 295 (371)
...+|.|+|+++.+|+-+..+|.+++. ++....+.. .++ .+.+.++|+||.|+|.-.. +
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 467899999999999999999988653 443333221 111 1345789999999974311 1
Q ss_pred cCCCcCCCeEEEEeeecCC
Q 017438 296 RGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d~ik~gavVIDvgin~~ 314 (371)
-++..+.|+.|||.+-.+.
T Consensus 86 ~~~~~~~g~~VIDlS~~fR 104 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAFR 104 (344)
T ss_pred HHHHHhCCCEEEECCchhh
Confidence 1223467999999986653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.045 Score=51.01 Aligned_cols=39 Identities=23% Similarity=0.241 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+..++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 467899999999999889999999999999999988543
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.041 Score=51.35 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999988764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.049 Score=51.19 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA 40 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999988889999999999999999987753
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.044 Score=54.70 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---------------CCHH-hhccCCcEEEEccCCCC--ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNPE-EITRQADIIISAVGQPN--MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---------------~~l~-~~l~~ADIVIsAvG~p~--~v~ 296 (371)
+.+|.|+|+++.+|+-+..+|.+++. ++....+.. .++. ..+.++|+||.|+|.-. -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 46899999999999999999998764 345454331 0111 22468999999997421 122
Q ss_pred CCCcCCCeEEEEeeecC
Q 017438 297 GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~ 313 (371)
+..++.|++|||.+-.+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 23456789999998654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.048 Score=50.82 Aligned_cols=38 Identities=34% Similarity=0.483 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++.+|..++..|+++|++|+++.+.
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999999999999999999999999998765
|
|
| >KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.059 Score=54.47 Aligned_cols=78 Identities=29% Similarity=0.391 Sum_probs=62.6
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccC-CC---Ccc
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVG-QP---NMV 295 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG-~p---~~v 295 (371)
.+.++.||+.-|+|.|.+ |.-+|..+...|..|.-.+--+ -.++|.+.+||.|-.-++ .| +++
T Consensus 140 ~G~el~GKTLgvlG~GrI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~li 218 (406)
T KOG0068|consen 140 LGWELRGKTLGVLGLGRI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLL 218 (406)
T ss_pred eeeEEeccEEEEeecccc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhcc
Confidence 467899999999999996 9999999999998877765432 257899999999987776 33 356
Q ss_pred cCC---CcCCCeEEEEee
Q 017438 296 RGS---WIKPGAVIIDVG 310 (371)
Q Consensus 296 ~~d---~ik~gavVIDvg 310 (371)
+.+ ..|+|..||++.
T Consensus 219 n~~tfA~mKkGVriIN~a 236 (406)
T KOG0068|consen 219 NDETFAKMKKGVRIINVA 236 (406)
T ss_pred CHHHHHHhhCCcEEEEec
Confidence 554 359999999986
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.098 Score=53.49 Aligned_cols=71 Identities=25% Similarity=0.338 Sum_probs=51.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------CCHHhhccCCcEEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------KNPEEITRQADIIIS 287 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------~~l~~~l~~ADIVIs 287 (371)
+|.|||.|- ||.|+|.+|. .|.+|+.++++. .+..+...+||+||.
T Consensus 2 kI~VIGlGy-vGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGY-VGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCH-HHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 589999987 5999998777 489999997541 123345689999999
Q ss_pred ccCCCC----------ccc------CCCcCCCeEEEEeeecC
Q 017438 288 AVGQPN----------MVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 288 AvG~p~----------~v~------~d~ik~gavVIDvgin~ 313 (371)
+++.|- .+. .. +++|.+||+-.+-+
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 999761 111 12 47888998876644
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.069 Score=49.71 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
-.|+.++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 17 ~~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 53 (200)
T TIGR02354 17 QKLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDF 53 (200)
T ss_pred HHHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 3578899999999995 9999999999997 7888853
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.077 Score=49.43 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998889999999999999999887544
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.058 Score=50.27 Aligned_cols=38 Identities=29% Similarity=0.386 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|+|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~ 41 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP 41 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 37899999999988899999999999999999887653
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.059 Score=51.54 Aligned_cols=34 Identities=18% Similarity=0.464 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD 55 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLD 55 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 468899999999996 9999999999995 788874
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.1 Score=54.29 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-CHHh--hccCCcEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NPEE--ITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l~~--~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
++||+|+|+|.|.. |++++.+|.++|+.|++...+.. +..+ .+++ +++..-.+.+ .+.+ ....+|.--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 47999999999987 99999999999999999875432 2221 2333 3222222211 1112 23456666666
Q ss_pred cCCCCCC----CCCCceeecccchh--hhhh-h--cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVEDAK----SPRGYRLVGDVCYE--EACE-V--ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~~~~----~~~g~kl~GDVd~~--~v~~-~--a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++.. +- ...|-.+++++++. ...+ . ...+.-|-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~~-p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYR-PEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCC-HHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 5431 10 01233578888751 1111 0 011223669999999999999998764
|
|
| >PRK05225 ketol-acid reductoisomerase; Validated | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.055 Score=56.69 Aligned_cols=79 Identities=27% Similarity=0.372 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhhccCCcEEEEccCCCC--
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEITRQADIIISAVGQPN-- 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~l~~ADIVIsAvG~p~-- 293 (371)
.|+||+|+|||.|.. |+.-|..|...|.+|++.-|. ..++.+.+++||+|+..++-..
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~ 111 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 111 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHH
Confidence 368999999999886 998888888889998865433 1357788999999999998321
Q ss_pred cccC---CCcCCCe-EEEEeeecCC
Q 017438 294 MVRG---SWIKPGA-VIIDVGINPV 314 (371)
Q Consensus 294 ~v~~---d~ik~ga-vVIDvgin~~ 314 (371)
.|-. ..+|+|+ +.+-=|+|..
T Consensus 112 ~v~~~i~p~LK~Ga~L~fsHGFni~ 136 (487)
T PRK05225 112 DVVRAVQPLMKQGAALGYSHGFNIV 136 (487)
T ss_pred HHHHHHHhhCCCCCEEEecCCceee
Confidence 2222 3567775 3444455543
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.11 Score=48.04 Aligned_cols=38 Identities=26% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++++|+++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 45789999999999888999999999999999888654
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.077 Score=53.38 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=47.8
Q ss_pred cHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCCCcc----c--CCCcCCCe
Q 017438 250 VGMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPNMV----R--GSWIKPGA 304 (371)
Q Consensus 250 VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p~~v----~--~d~ik~ga 304 (371)
-|.++|..|++.|.+|++++++. .+..+..+++|+||+.++.++-+ . .+.+++|+
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 47788888888888888886531 24668899999999999976532 2 24568899
Q ss_pred EEEEeeecC
Q 017438 305 VIIDVGINP 313 (371)
Q Consensus 305 vVIDvgin~ 313 (371)
+|||.++..
T Consensus 111 IVID~STIs 119 (341)
T TIGR01724 111 VICNTCTVS 119 (341)
T ss_pred EEEECCCCC
Confidence 999998653
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.074 Score=49.32 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999999999999999999999999999888764
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.14 Score=52.50 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHh---CCCCCCCEEEEEcCC----------------cccHHHHHHHhccCCCeEEEEeCCC-------
Q 017438 219 PCTPKGCIELLHRY---GFDIKGKRAVVIGRS----------------NIVGMPAALLLQREDATVSIVHSRT------- 272 (371)
Q Consensus 219 PcTa~gvi~lL~~~---~i~l~GK~vvVIG~s----------------~~VGkpla~lL~~~gAtVtv~h~~t------- 272 (371)
++++.-++..+.+. +-+++||+|+|-|.+ |-.|..+|..|..+||+|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 66777777666643 246999999999873 3359999999999999999987542
Q ss_pred ---------CCH-H----hhccCCcEEEEccCCCCc
Q 017438 273 ---------KNP-E----EITRQADIIISAVGQPNM 294 (371)
Q Consensus 273 ---------~~l-~----~~l~~ADIVIsAvG~p~~ 294 (371)
.++ + +...+.|++|.+++...+
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 123 2 223568999999987665
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.12 Score=51.20 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~ 277 (371)
+|.....+..+...+....|.+++|.|.|. +|..+++++...|+.|+++.+.... +.+
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 444344455555555555799999999866 6999999999999987766433211 122
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
....+|++|.++|.+..+. -+.++++..++.+|..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 2335799999988654332 2467888888889864
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.12 Score=51.68 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=52.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------------CCCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------------t~~l~~~l~~ADI 284 (371)
++|.|||+|-+ |..+|..++..|..|++.+.. +.++++.+.+||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999999775 999999999999999998653 2356678899999
Q ss_pred EEEccCCCCcccC-------CCcCCCeEEEEeeec
Q 017438 285 IISAVGQPNMVRG-------SWIKPGAVIIDVGIN 312 (371)
Q Consensus 285 VIsAvG~p~~v~~-------d~ik~gavVIDvgin 312 (371)
||-++.-..-++. +..++++ ||+..+.
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~a-IlaSnTS 120 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPDA-IIASSTS 120 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCCe-EEEECCC
Confidence 9998863211222 2356666 6665444
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.15 Score=47.20 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
-.|+.++|+|+|.|+ +|-.+++.|...|. ++++++..
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 346889999999999 59999999999996 79998643
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.075 Score=48.91 Aligned_cols=39 Identities=28% Similarity=0.296 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~ 41 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK 41 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH
Confidence 478999999999999999999999999999998887653
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.064 Score=49.16 Aligned_cols=39 Identities=31% Similarity=0.455 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~ 43 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA 43 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999988889999999999999999887754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.049 Score=51.12 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
..+++||+++|.|+++-+|+.++..|+.+|++|.+..+..
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~ 44 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ 44 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4578999999999999999999999999999998887653
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.073 Score=53.50 Aligned_cols=37 Identities=22% Similarity=0.375 Sum_probs=31.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+-.|++++|+|||.|++ |.+++..|...|. .+++++.
T Consensus 19 Q~~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (338)
T PRK12475 19 QRKIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR 56 (338)
T ss_pred HHhhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 34578999999999995 9999999999996 7888754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.061 Score=49.79 Aligned_cols=36 Identities=31% Similarity=0.335 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999999999999999999988764
|
|
| >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.12 Score=53.90 Aligned_cols=124 Identities=20% Similarity=0.283 Sum_probs=68.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-HHhhccCC--cEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-PEEITRQA--DIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-l~~~l~~A--DIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
+++|+|.|+|.|+. |+++|.+|.++|+.|++++.+... ..+.++.. .+-+. .|. ..++.+ ....+|+.-|+
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~-~g~---~~~~~~~~~d~vv~sp~I 79 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFV-GGP---FDPALLDGVDLVALSPGL 79 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEE-eCC---CchhHhcCCCEEEECCCC
Confidence 57899999999997 999999999999999999865321 11122222 11111 110 001112 12345555555
Q ss_pred cCCC-C--CC----CCCCceeecccchh-hhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVE-D--AK----SPRGYRLVGDVCYE-EACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~-~--~~----~~~g~kl~GDVd~~-~v~~~------a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++.. + +- ...|-++++++++- .+.+. ...+--|-|=-|.-|+..|+.++++.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~ 146 (498)
T PRK02006 80 SPLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERA 146 (498)
T ss_pred CCcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 5421 0 00 00123566666541 11110 001112568889999999999998764
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.13 Score=50.78 Aligned_cols=53 Identities=28% Similarity=0.465 Sum_probs=41.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..+|..|+.+|. +|++++.. +.++++ +++||+||.++|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 4799999977 69999999998774 78888642 234444 7999999999996
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.12 Score=50.60 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=51.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||+|.+ |.++|..|+..|..|+++++.. .++ +.++
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~ 83 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA 83 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence 48999999875 9999999999999999997542 233 4478
Q ss_pred CCcEEEEccCCCCcccC-------CCc-CCCeEEEEeee
Q 017438 281 QADIIISAVGQPNMVRG-------SWI-KPGAVIIDVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~-------d~i-k~gavVIDvgi 311 (371)
+||+||-++.--.-++. .+. ++++++..--.
T Consensus 84 ~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 84 DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 99999988763211221 345 77888776443
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.1 Score=48.77 Aligned_cols=54 Identities=17% Similarity=0.197 Sum_probs=41.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC---Ce-EEEEeCC----------------CCCHHhhccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED---AT-VSIVHSR----------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g---At-Vtv~h~~----------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
+..+|.|||.|.+ |.+++..|.+.+ .+ +++++++ +.+.++.+.++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999886 999999888765 23 6666543 13456678899999999984
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.069 Score=49.86 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.11 Score=54.59 Aligned_cols=53 Identities=23% Similarity=0.190 Sum_probs=43.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~ADI 284 (371)
++|.|||.|.+ |.++|..|++.|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 57999999886 9999999999999999987541 245567899999
Q ss_pred EEEccCCC
Q 017438 285 IISAVGQP 292 (371)
Q Consensus 285 VIsAvG~p 292 (371)
||.++...
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99988743
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.095 Score=50.80 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=47.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC-----------------CCHHhhccCCcEEEEccCCCCc---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT-----------------KNPEEITRQADIIISAVGQPNM--- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t-----------------~~l~~~l~~ADIVIsAvG~p~~--- 294 (371)
.++.|||.|.+ |..++..|.+.| .+|+++.++. .+..+.++++|+||.++....+
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~~~~v 80 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLAVLPL 80 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHHHHHH
Confidence 36899999886 999999998887 5788776542 2344567889999999874321
Q ss_pred cc--CCCcCCCeEEEEe
Q 017438 295 VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 v~--~d~ik~gavVIDv 309 (371)
+. ...++++.+||.+
T Consensus 81 l~~l~~~l~~~~~ivS~ 97 (277)
T PRK06928 81 LKDCAPVLTPDRHVVSI 97 (277)
T ss_pred HHHHHhhcCCCCEEEEE
Confidence 11 0234556566544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.049 Score=52.50 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE 43 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999988899999999999999999887653
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.14 Score=49.89 Aligned_cols=53 Identities=28% Similarity=0.424 Sum_probs=41.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..++..|+..|. +|.+++.. +.+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999966 59999999988764 88888643 1234 458999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 64
|
|
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.11 Score=53.64 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+|.|+|.|+. |+++|.+|.++|++|++++..
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67999999999997 999999999999999999865
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.1 Score=51.61 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|+.++|+|||.|+. |-+++..|...|. ++++++
T Consensus 23 ~kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD 58 (287)
T PRK08223 23 QRLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIAD 58 (287)
T ss_pred HHHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEe
Confidence 3578899999999995 9999999999995 788874
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.051 Score=50.60 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999999998888999999999999999988765
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.12 Score=52.05 Aligned_cols=71 Identities=27% Similarity=0.349 Sum_probs=54.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsAvG 290 (371)
++|.|||+|.- |.++|..|.+.|..|++--++ |.|+.+.+.+||+||-+++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 57999999886 999999999999888887542 3588899999999999998
Q ss_pred CCCc---cc--CCCcCCCeEEEEee
Q 017438 291 QPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 291 ~p~~---v~--~d~ik~gavVIDvg 310 (371)
.-.+ ++ ...+++++.++-+.
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 6332 11 14567777776653
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.12 Score=50.05 Aligned_cols=89 Identities=17% Similarity=-0.006 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhhc---
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEIT--- 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~l--- 279 (371)
...+..|.+..---.|.+|+|.|+++.+|..+++++...|++|+...++. .++.+.+
T Consensus 124 ~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 124 LTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKA 203 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHh
Confidence 33344443333234689999999877789999999999999877654321 1222221
Q ss_pred --cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 280 --RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+..|+++.++|.+.+- --+.++++..++.+|.
T Consensus 204 ~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 204 SPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 2368888888865331 1245788888888885
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.092 Score=52.78 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=52.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccC-CCeEE-EEeCCC---C--------------------CHHhhccCCcEEEEccCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE-DATVS-IVHSRT---K--------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~-gAtVt-v~h~~t---~--------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+|.|+|++|.+|+-++.+|.++ +.++. ++.++. + +.++...++|+||.|++...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999888999999999877 56766 544321 1 11233458999999997431
Q ss_pred c--ccCCCcCCCeEEEEeeecCC
Q 017438 294 M--VRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~ 314 (371)
. +-+...+.|..|||.+-...
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhhh
Confidence 1 22234567999999997653
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.063 Score=49.67 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~ 38 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK 38 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence 5799999999998899999999999999998886653
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.08 Score=48.49 Aligned_cols=38 Identities=29% Similarity=0.293 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
++++|+++|+|+++-+|+.++..|+++|+ +|+++.+..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 46889999999988899999999999999 999988754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.079 Score=48.82 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|++..|.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999998875
|
|
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.13 Score=53.86 Aligned_cols=53 Identities=28% Similarity=0.271 Sum_probs=44.2
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeCC
Q 017438 218 IPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 271 (371)
Q Consensus 218 ~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~~ 271 (371)
.+.|..|++.. |++.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++.++
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 35788886654 55678899999999999988 59999999999999877 77665
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.081 Score=44.52 Aligned_cols=75 Identities=23% Similarity=0.222 Sum_probs=47.2
Q ss_pred EEEEEcCCcccHHHHHHHhcc-CCCeEEEE-eCCC---CC-------H--------H-hhc--cCCcEEEEccCCCCc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQR-EDATVSIV-HSRT---KN-------P--------E-EIT--RQADIIISAVGQPNM-- 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~-~gAtVtv~-h~~t---~~-------l--------~-~~l--~~ADIVIsAvG~p~~-- 294 (371)
++.|+|+++.+|+-++..|.+ .+.+++.+ .++. +. + . +.+ .++|+||.+++....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 477889777778888887777 46665555 2211 00 0 0 112 489999999985432
Q ss_pred -cc--CCCcCCCeEEEEeeecCC
Q 017438 295 -VR--GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 295 -v~--~d~ik~gavVIDvgin~~ 314 (371)
+. ....++|.+|||++....
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred HHHHHHhhhcCCCEEEECCcccc
Confidence 11 123578999999996543
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.095 Score=48.51 Aligned_cols=38 Identities=34% Similarity=0.522 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|..++..|+++|++|+++.|.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999988764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.057 Score=52.74 Aligned_cols=38 Identities=37% Similarity=0.400 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|++.-+|+.++..|+++|++|+++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999999889999999999999999998765
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.16 Score=49.10 Aligned_cols=36 Identities=25% Similarity=0.117 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-+||+|+|.|+++.+|+.++..|+++|.+|+.+.++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999866543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.14 Score=47.91 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||.++|.|+++-+|+.++..|.++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999998999999999999999887654
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.24 Score=47.26 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=60.4
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH---
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE--- 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~--- 276 (371)
++.+...+..++...+ -.|.+++|.|.++.+|..+++++...|++|++..++. .++.
T Consensus 122 ~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 200 (324)
T cd08292 122 IAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV 200 (324)
T ss_pred cccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence 3334444444544332 3589999999988889999999999999877664321 1111
Q ss_pred -hhc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 277 -EIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 277 -~~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+.+ +..|+|+.++|.+..- --+.++++..++++|.
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 222 2589999988875321 1235678888899885
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.11 Score=50.88 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~ 271 (371)
++||+++|.|+++.+|+.++..|+++| ++|+++.+.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 579999999999999999999999886 688877543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.12 Score=50.88 Aligned_cols=77 Identities=29% Similarity=0.450 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---C------------------CCHH--hhccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---T------------------KNPE--EITRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---t------------------~~l~--~~l~~ADIVIsAvG~p 292 (371)
..|++|+|+|.|. +|..+++++...|+.|+++.++ . .++. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999865 6999999999999998887652 1 1111 1123579999999986
Q ss_pred Cccc--CCCcCCCeEEEEeeecC
Q 017438 293 NMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 293 ~~v~--~d~ik~gavVIDvgin~ 313 (371)
..+. -+.++++..++-+|...
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecCC
Confidence 5432 24578887788888643
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.14 Score=50.48 Aligned_cols=52 Identities=17% Similarity=0.302 Sum_probs=41.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCCC-------CH----------------HhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK-------NP----------------EEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t~-------~l----------------~~~l~~ADIVIsAvG~p 292 (371)
+|.|||+|. ||.+++..|+.+| ..|.++++... ++ .+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999976 6999999999998 47888876531 01 24578999999999975
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.066 Score=52.02 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999998889999999999999999988765
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.06 Score=49.85 Aligned_cols=39 Identities=36% Similarity=0.500 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++++|.++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~ 42 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL 42 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999999999999999999999999887653
|
|
| >PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.11 Score=46.58 Aligned_cols=37 Identities=35% Similarity=0.554 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+|+|||.|.. |--++..|.+.|.+|++++|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 678999999999998 9999999999999999999864
|
... |
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.084 Score=49.49 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3579999999999998999999999999999988754
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.11 Score=51.90 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=53.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC----CCHHhhccCCcEEEEccCCC---CcccCCCcCCCeEEEEee
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT----KNPEEITRQADIIISAVGQP---NMVRGSWIKPGAVIIDVG 310 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t----~~l~~~l~~ADIVIsAvG~p---~~v~~d~ik~gavVIDvg 310 (371)
-+|.|+|++|..|.-+..+|.++. .++.-..++. .+.++.+.++|++|.|++.- .++ +...+.|..|||.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~-~~~~~~g~~VIDlS 80 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAV-SLVDNPNTCIIDAS 80 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHH-HHHHhCCCEEEECC
Confidence 379999999999999999999875 4544443332 24455668899999998642 122 22335689999998
Q ss_pred ecCC
Q 017438 311 INPV 314 (371)
Q Consensus 311 in~~ 314 (371)
-.+.
T Consensus 81 adfR 84 (310)
T TIGR01851 81 TAYR 84 (310)
T ss_pred hHHh
Confidence 6654
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.14 Score=47.19 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999987753
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.074 Score=48.70 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999888765
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.17 Score=51.89 Aligned_cols=121 Identities=17% Similarity=0.272 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-HHhhccC--CcEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-PEEITRQ--ADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-l~~~l~~--ADIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
+.+|+++|+|.|++ |+.+|..|.++|+.|++.+..... ..+.++. .-+.+. .|. .+.+.+ ....+|+--|+
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~---~~~~~~~~~d~vv~spgi 77 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGR---LKDALDNGFDILALSPGI 77 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCC---CCHHHHhCCCEEEECCCC
Confidence 57999999999986 999999999999999998754321 1111211 011110 010 000001 12344444444
Q ss_pred cCCCCCC---CCCCceeecccchh-hhh----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVEDAK---SPRGYRLVGDVCYE-EAC----EVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~~~~---~~~g~kl~GDVd~~-~v~----~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++..--- ...|-.+.++.++- ... ...-+ |-|=-|.-|+..|+.++++.+
T Consensus 78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~li~~iL~~~ 135 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIA---ITGSNGKTTVTSLVGYLCIKC 135 (445)
T ss_pred CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEEE---EECCCcHHHHHHHHHHHHHHc
Confidence 4320000 00122566666652 111 12233 558889999999999988764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.068 Score=50.05 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999998888999999999999999988765
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.14 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.217 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999999999999988765
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.068 Score=49.65 Aligned_cols=37 Identities=38% Similarity=0.517 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|.+..++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999889999999999999999988765
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.19 Score=48.18 Aligned_cols=93 Identities=17% Similarity=0.020 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhhc
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEIT 279 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~l 279 (371)
|+.....+..|.+..---.|.+++|.|+++.||..+++++...|++|+.+.+. ..++.+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 44444455555443333469999999987778999999999999988765432 12222211
Q ss_pred -----cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 280 -----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 -----~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+..|+|+.++|.+.+- --+.++++..++.+|.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 2368888888863321 1245677777788774
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.1 Score=50.05 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=30.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|+.++|+|||.|++ |.+++..|...|. ++++++
T Consensus 28 ~~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD 63 (245)
T PRK05690 28 EKLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD 63 (245)
T ss_pred HHhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 3578999999999985 9999999999995 788874
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.064 Score=50.63 Aligned_cols=38 Identities=37% Similarity=0.553 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.+..++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999998888999999999999999988775
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.11 Score=48.05 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999999999999999999999999887664
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.2 Score=49.86 Aligned_cols=52 Identities=21% Similarity=0.412 Sum_probs=40.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.||.|||+|. ||..+|..|+..+. ++.+++.+. .+. +.+++|||||.++|.
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence 4899999977 59999999988873 577775431 233 458999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 4
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.079 Score=49.05 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++.+|+.++..|+++|++|.++.+.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 4679999999999999999999999999999888664
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.086 Score=49.61 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999999999999999999999888765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.078 Score=50.18 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999998888999999999999999988764
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.23 Score=50.05 Aligned_cols=93 Identities=20% Similarity=0.286 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHHhCCC-CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HH
Q 017438 219 PCTPKGCIELLHRYGFD-IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PE 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~-l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~ 276 (371)
+|.....+..+...+.. -.|+.|+|.|.|. +|..+++++...|++|+++.+.... +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 44444455555555443 3699999999866 6999999999999987776433111 11
Q ss_pred hhccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+..+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 22234799999998764332 2457888888888864
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.17 Score=52.42 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=54.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------------CHHhhccCCcEEEEcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------------NPEEITRQADIIISAV 289 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------------~l~~~l~~ADIVIsAv 289 (371)
-+|.|||-|- ||.|+|..|.. +.+|+.++.+.. .-.+.+++||++|+++
T Consensus 7 mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 5799999988 59999999876 689999875421 1123578999999999
Q ss_pred CCCC---------ccc------CCCcCCCeEEEEeeecCC
Q 017438 290 GQPN---------MVR------GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 290 G~p~---------~v~------~d~ik~gavVIDvgin~~ 314 (371)
|.|. .+. ...+++|++|||-.+-+.
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p 124 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP 124 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 9772 121 134688999999876553
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.1 Score=48.11 Aligned_cols=37 Identities=38% Similarity=0.528 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~ 38 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLND 38 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999999999999999999999999887653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.12 Score=48.05 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999888664
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.094 Score=47.94 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|..++..|.++|++|++..++.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999999999999999887754
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.081 Score=50.13 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999998888999999999999999988765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.11 Score=48.45 Aligned_cols=37 Identities=32% Similarity=0.420 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|+|+++-+|+.++..|.++|+.|.++.++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999999999999999999998887664
|
|
| >TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)) | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.13 Score=51.90 Aligned_cols=69 Identities=22% Similarity=0.334 Sum_probs=52.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--------CeEEEEeC-----C----------------------------CCCHHhh
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--------ATVSIVHS-----R----------------------------TKNPEEI 278 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--------AtVtv~h~-----~----------------------------t~~l~~~ 278 (371)
+|+|||+|.- |.++|..|.++| .+|++..+ . +.|+++.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999885 999999999888 78888854 1 2467788
Q ss_pred ccCCcEEEEccCCCCc---cc--CCCcCCCeEEEEe
Q 017438 279 TRQADIIISAVGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~---v~--~d~ik~gavVIDv 309 (371)
+++||+||.+++...+ +. ..+++++..+|-+
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~ 115 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISC 115 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEE
Confidence 9999999999985321 11 1356777777765
|
Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.094 Score=49.47 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+.+|++|+++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998765
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.078 Score=48.73 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 3679999999999999999999999999998877654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.11 Score=48.65 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999999999999999999999887653
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.36 Score=44.21 Aligned_cols=94 Identities=30% Similarity=0.418 Sum_probs=63.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh-
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI- 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~- 278 (371)
|+.....+..++....-..|++++|.|.|. +|..++.++...|++|+.+.++. .+..+.
T Consensus 116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (271)
T cd05188 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL 194 (271)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence 444444555565555445799999999999 89999999999999988775531 111111
Q ss_pred ----ccCCcEEEEccCCCCcc--cCCCcCCCeEEEEeeecC
Q 017438 279 ----TRQADIIISAVGQPNMV--RGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 279 ----l~~ADIVIsAvG~p~~v--~~d~ik~gavVIDvgin~ 313 (371)
-+..|++|.++|.+..+ -.+.++++..++++|...
T Consensus 195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24579999888863332 224567788888888543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.2 Score=48.20 Aligned_cols=35 Identities=26% Similarity=0.218 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+||+|+|.|+++-+|+.++..|+++|.+|+++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47999999998889999999999999998876543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.12 Score=46.84 Aligned_cols=38 Identities=37% Similarity=0.472 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++.+|+++|.|+++-+|+.++..|.++|++|+++.|+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999888764
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.18 Score=50.47 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=45.3
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCCC----------------------------CHHhhccCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTK----------------------------NPEEITRQA 282 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t~----------------------------~l~~~l~~A 282 (371)
-|-.++.++|+|.|+.|.+|+.++..|+++ |..|..+.+... .+++.++++
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 345677789999999999999999999988 588887764321 134556789
Q ss_pred cEEEEccC
Q 017438 283 DIIISAVG 290 (371)
Q Consensus 283 DIVIsAvG 290 (371)
|+||..++
T Consensus 88 d~ViHlAa 95 (386)
T PLN02427 88 DLTINLAA 95 (386)
T ss_pred CEEEEccc
Confidence 99997665
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.11 Score=48.88 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+.+|++|.++.++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999888765
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.082 Score=49.21 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 678999999998889999999999999999988765
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.22 Score=48.52 Aligned_cols=93 Identities=15% Similarity=0.035 Sum_probs=59.6
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~ 277 (371)
+|.....+..|.+..---.|.+|+|.|+++.||..+++++..+|++|+...+.. .++.+
T Consensus 133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 212 (338)
T cd08295 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDA 212 (338)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHH
Confidence 444445555565443334699999999977789999999999999877654321 12222
Q ss_pred hc-----cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 278 IT-----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 278 ~l-----~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
.+ +.+|+++.++|...+- --+.++++..++.+|.
T Consensus 213 ~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 213 ALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred HHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 11 2468888877753221 1245777777778774
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.095 Score=50.53 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=28.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++|.|||.|.+ |.+++..|+..|.+|++++.
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence 57999999875 99999999999999999874
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.15 Score=49.70 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=40.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVG 290 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG 290 (371)
+|+|.|++|.+|+.++..|+++|.+|++..|+.. .+.+.++.+|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 7999999999999999999999999998876521 23455777888887655
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.2 Score=50.02 Aligned_cols=54 Identities=17% Similarity=0.356 Sum_probs=40.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-C------eEEEEeCCC--------------------------CCHHhhccCCcEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-A------TVSIVHSRT--------------------------KNPEEITRQADIII 286 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-A------tVtv~h~~t--------------------------~~l~~~l~~ADIVI 286 (371)
+|+|+|+++.||..++..|...+ + ++.+..... .+..+.+++|||||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 79999996667999999998765 2 266654432 23457899999999
Q ss_pred EccCCCC
Q 017438 287 SAVGQPN 293 (371)
Q Consensus 287 sAvG~p~ 293 (371)
.+.|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999753
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.11 Score=47.77 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|.++|.|+++-+|+.++..|+++|++|.+++|+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999998763
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.21 Score=49.94 Aligned_cols=52 Identities=29% Similarity=0.454 Sum_probs=40.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-C-eEEEEeCCC--------------------------CCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-A-TVSIVHSRT--------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-A-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG 290 (371)
++|+|||+|+ ||.++|++|..++ + ++.+..... .+ .+.++.|||||-+.|
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 4899999977 5999999998887 3 677765431 12 577999999998888
Q ss_pred CC
Q 017438 291 QP 292 (371)
Q Consensus 291 ~p 292 (371)
.|
T Consensus 79 ~p 80 (313)
T COG0039 79 VP 80 (313)
T ss_pred CC
Confidence 54
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.099 Score=47.76 Aligned_cols=38 Identities=37% Similarity=0.450 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE-eCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV-HSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~-h~~t 272 (371)
++.+|+++|+|+++-+|+.++..|+++|++|++. .++.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4789999999998889999999999999999888 6653
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.1 Score=49.87 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3789999999999999999999999999999988765
|
|
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.21 Score=48.45 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCCCCHH-----------h-hccCCcEEEEccCCCCccc--CCCc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRTKNPE-----------E-ITRQADIIISAVGQPNMVR--GSWI 300 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t~~l~-----------~-~l~~ADIVIsAvG~p~~v~--~d~i 300 (371)
..|++++|+|.|. ||..+++++...|++ |.++..+...++ + .-..+|+||-++|.+..+. -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 4688999999876 599999988889997 444533221111 1 1134799999999876543 2678
Q ss_pred CCCeEEEEeeec
Q 017438 301 KPGAVIIDVGIN 312 (371)
Q Consensus 301 k~gavVIDvgin 312 (371)
+++..++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 888888888864
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.09 Score=52.94 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC---CCeEEEEeCCC---------------CCHHhhc-cCCcEEEEccCCCC--cc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE---DATVSIVHSRT---------------KNPEEIT-RQADIIISAVGQPN--MV 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~---gAtVtv~h~~t---------------~~l~~~l-~~ADIVIsAvG~p~--~v 295 (371)
++.+|.|||+++.+|+-+..+|.++ ..++....+.. .++.+.. .++|+++.|+|..- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 5678999999999999999999984 35666665431 1222222 67899999997421 12
Q ss_pred cCCCcCCCeEEEEeeecCC
Q 017438 296 RGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d~ik~gavVIDvgin~~ 314 (371)
-++..+.|+.|||.+-.+.
T Consensus 83 ~~~~~~~g~~VIDlS~~fR 101 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLFA 101 (336)
T ss_pred HHHHHHCCCEEEECChHhc
Confidence 2334567999999986654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.2 Score=46.75 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999999999999999999988754
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.45 Score=48.09 Aligned_cols=77 Identities=25% Similarity=0.385 Sum_probs=54.2
Q ss_pred ccCCHHHHHHHHHHhC------CCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC------------------C
Q 017438 218 IPCTPKGCIELLHRYG------FDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR------------------T 272 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~------i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~------------------t 272 (371)
+|+++.-.++.|-+.. -.=+|+.|+|+|+|+.||..+.+++...| +.|+.+.+. +
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 4665555555555555 44579999999999999999999999999 555555433 2
Q ss_pred CCHHhhccC-----CcEEEEccCCCCc
Q 017438 273 KNPEEITRQ-----ADIIISAVGQPNM 294 (371)
Q Consensus 273 ~~l~~~l~~-----ADIVIsAvG~p~~ 294 (371)
.|..+.+++ -|+|+-++|.+.+
T Consensus 212 ~~~~e~~kk~~~~~~DvVlD~vg~~~~ 238 (347)
T KOG1198|consen 212 ENVVELIKKYTGKGVDVVLDCVGGSTL 238 (347)
T ss_pred HHHHHHHHhhcCCCccEEEECCCCCcc
Confidence 344455544 7999988887543
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.19 Score=50.06 Aligned_cols=57 Identities=23% Similarity=0.396 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
-.-+++=-||-|.+ |.+++..|++.|.+|||.+++. ..-.|..+++|+||+-++.|.
T Consensus 33 ~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~ 103 (327)
T KOG0409|consen 33 PSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPK 103 (327)
T ss_pred cccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChH
Confidence 35788999999986 9999999999999999999873 234588999999999999775
|
|
| >PRK10727 DNA-binding transcriptional regulator GalR; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=4.4 Score=39.39 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=53.1
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017438 81 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 145 (371)
Q Consensus 81 ~ildGk~-la~~i~~~ik~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~ 145 (371)
++|+|+. ++++-|+.|.+.+++| |.+| .+++|.-. .++--...++...+.|++.|......
T Consensus 20 rvLn~~~~Vs~~tr~rV~~~a~el----gY~pn~~ar~l~~~~~~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~ 95 (343)
T PRK10727 20 RVINNSPKASEASRLAVHSAMESL----SYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIG 95 (343)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHhhhhCCCCeEEEEeCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 4677764 6666666666655554 4444 45555432 23333344567888999999887655
Q ss_pred eCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q 017438 146 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 175 (371)
Q Consensus 146 ~lp~~v~~~el~~~I~~LN~D~~V~GIlVq 175 (371)
... -+.++..+.++.+.. .+++||++.
T Consensus 96 ~~~--~~~~~~~~~i~~l~~-~~vdgiIi~ 122 (343)
T PRK10727 96 NGY--HNEQKERQAIEQLIR-HRCAALVVH 122 (343)
T ss_pred eCC--CCHHHHHHHHHHHHh-cCCCEEEEe
Confidence 443 233444566666654 479999996
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.22 Score=48.04 Aligned_cols=69 Identities=25% Similarity=0.355 Sum_probs=48.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+|+|||+|.+ |..++..|.+.|.+|+++.+.. .+..+....+|+||.++..+.
T Consensus 2 kI~IiG~G~i-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~~ 80 (305)
T PRK12921 2 RIAVVGAGAV-GGTFGGRLLEAGRDVTFLVRPKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAYQ 80 (305)
T ss_pred eEEEECCCHH-HHHHHHHHHHCCCceEEEecHHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecccC
Confidence 6899999885 9999999999999999887610 122333478999999988654
Q ss_pred c---cc--CCCcCCCeEEEEe
Q 017438 294 M---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 294 ~---v~--~d~ik~gavVIDv 309 (371)
+ +. ..+++++.+||-+
T Consensus 81 ~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 81 LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred HHHHHHHHHhhcCCCCEEEEe
Confidence 2 11 1245667777655
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.12 Score=48.50 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|++ .-+|+.++..|+++|++|.++.++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 789999999997 335999999999999999988654
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.21 Score=46.79 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=43.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
.++.|||+++-+|+-++..+.++|.+||-.-|+. ..+.+.+..-|+||+|.|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4789999999999999999999999999886652 12335677889999998854
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.13 Score=52.21 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=30.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
.+++++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~ 167 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDH 167 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 468899999999995 9999999999997 7888864
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.078 Score=52.61 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~ 41 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE 41 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999988889999999999999999987753
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.15 Score=47.06 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=41.6
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
|+|+|+.|.+|++++..|+..+.+|+++.|.. ..|.+.++.+|.||..++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 68999988889999999999999999988763 1345678888888888874
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.26 Score=48.70 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=33.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
..-+++|+|+|.|+.|-+|..++..|+++|.+|+.+.+
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 35578899999999999999999999999999987754
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.2 Score=46.02 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++++|+++|.|+++-+|+.++..|+++|+.|++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 367899999999999999999999999999876543
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.15 Score=47.79 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
-.|+.++|+|||.|++ |..++..|...|. ++++++.
T Consensus 24 ~~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 60 (212)
T PRK08644 24 EKLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDF 60 (212)
T ss_pred HHHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 3468899999999995 9999999999996 5888753
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.13 Score=50.02 Aligned_cols=40 Identities=35% Similarity=0.409 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
..++||.++|-|++.-+|+++|..|++.||+|+++.|+.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4689999999999998999999999999999999988743
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.095 Score=48.06 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|++++|+|.++-+|..++..|.++|++|+++.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999997778999999999999999888765
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.13 Score=58.74 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=31.3
Q ss_pred HHhhccCCcEEEEccC----CCCcccCC-C---cCCCe----EEEEeeecC
Q 017438 275 PEEITRQADIIISAVG----QPNMVRGS-W---IKPGA----VIIDVGINP 313 (371)
Q Consensus 275 l~~~l~~ADIVIsAvG----~p~~v~~d-~---ik~ga----vVIDvgin~ 313 (371)
++++++.||+||+++- .|.+|+.+ + +|+|. +|+||.++.
T Consensus 291 ~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~mk~G~~~l~vI~DVs~D~ 341 (1042)
T PLN02819 291 HEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLTRKGGCPLVGVCDITCDI 341 (1042)
T ss_pred HHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhhcCCCccceEEEEEccCC
Confidence 4578899999999984 47789887 4 47787 999999774
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.16 Score=47.33 Aligned_cols=39 Identities=33% Similarity=0.494 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|.++-+|+.++..|.++|++|.++.++.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999899999999999999999987653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.1 Score=47.73 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.|++++|+|+++-+|+.++..|+++|++|.++.|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 568999999998889999999999999999998765
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.24 Score=48.10 Aligned_cols=74 Identities=20% Similarity=0.127 Sum_probs=51.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------CCHHhhc-----cCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEEIT-----RQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~~l~~~l-----~~ADIVIsAvG~ 291 (371)
|.+|+|.|+++.+|..+.+++...|+ .|+.+.++. .++.+.+ +..|+++.++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 48999999977789999999999998 677764321 1222221 247888888886
Q ss_pred CCcc-cCCCcCCCeEEEEeee
Q 017438 292 PNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 292 p~~v-~~d~ik~gavVIDvgi 311 (371)
+.+- .-+.++++..++++|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 5431 1245788888888884
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.14 Score=48.42 Aligned_cols=52 Identities=19% Similarity=0.287 Sum_probs=42.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC------HHhhccCC--cEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------PEEITRQA--DIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~------l~~~l~~A--DIVIsAvG~ 291 (371)
+|+|+|+++.+|+.++..|+++|.+|+++.+...| +++.+... |+||..+|.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 48999998889999999999999999988776433 44556655 999988774
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.086 Score=45.31 Aligned_cols=33 Identities=27% Similarity=0.533 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+.++|+|+|.|++ |..++..|...|. .+++++.
T Consensus 1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEES
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCC
Confidence 3589999999985 9999999999997 7999864
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.29 Score=49.58 Aligned_cols=52 Identities=25% Similarity=0.423 Sum_probs=40.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..+|..|+.++. ++.+++... .+ .+.+++|||||.+.|.
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCC
Confidence 6999999977 69999999988873 577775431 12 2458999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 116 ~ 116 (350)
T PLN02602 116 R 116 (350)
T ss_pred C
Confidence 5
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.13 Score=47.29 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|.+..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 579999999999999999999999999999887554
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.19 Score=49.46 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=45.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------------CHHhhccCCcEEE
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------NPEEITRQADIII 286 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------------~l~~~l~~ADIVI 286 (371)
+-+-.+++|+|.|+++.+|+.++..|+++|++|+++.+... .+.+.+++.|+||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34557899999999999999999999999999988754321 1234456789999
Q ss_pred EccCC
Q 017438 287 SAVGQ 291 (371)
Q Consensus 287 sAvG~ 291 (371)
..++.
T Consensus 85 h~A~~ 89 (353)
T PLN02896 85 HVAAS 89 (353)
T ss_pred ECCcc
Confidence 77764
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.29 Score=47.76 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+.++|+|+|.|+++-+|+.++..|+++|++|.++.+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r 41 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR 41 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 467999999999999999999999999999876543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.16 Score=46.39 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 468999999999888899999999999999877643
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.23 Score=48.89 Aligned_cols=51 Identities=25% Similarity=0.431 Sum_probs=40.5
Q ss_pred EEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+.|||+|. ||.+++..|+.+| .++++++.+. .+ .+.+++|||||.++|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 47999988 6999999999888 4788886431 12 467899999999999753
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.14 Score=48.07 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999998888999999999999999988764
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.19 Score=50.38 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------C------HHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N------PEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~------l~~~l~~ADIVIsAvG 290 (371)
++|+|+|.|+.|-+|+.++..|.++|.+|+.+.+... | +.+.++++|+||..++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 6899999999999999999999999999998865311 1 2234567899997765
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.13 Score=50.97 Aligned_cols=58 Identities=29% Similarity=0.509 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE----------------eCCC----------CCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV----------------HSRT----------KNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~----------------h~~t----------~~l~~~l~~ADIVIsA 288 (371)
.-.+.+|.|+|+++-+|.|++++|. .+-.|+-. |-.| +.|++.++.||+||-+
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3467799999999989999998665 44334333 2222 4688999999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 104 AGVPR 108 (345)
T KOG1494|consen 104 AGVPR 108 (345)
T ss_pred CCCCC
Confidence 99653
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.18 Score=45.78 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5688999999999999999999999999999777654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.14 Score=47.63 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t 272 (371)
.+++|+++|.|+++-+|+.++..|.++|++ |+++.++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~ 41 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA 41 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence 478999999999988999999999999998 88887653
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=92.53 E-value=0.14 Score=51.44 Aligned_cols=112 Identities=21% Similarity=0.250 Sum_probs=63.5
Q ss_pred EEEEcCCcccHHHHHHHhccCC-C-eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED-A-TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g-A-tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
|+|+|+ |.+|+.++..|.+++ . +|++..++. .+|.+.++++|+||+++|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 688999 446999999888886 3 788887652 126678999999999998641
Q ss_pred c--ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 294 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
- +-...++-|.-.||..+-. ...-. +++.++.++..-=.-=|.-|--+.++...+++.+.
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~~~----------~~~~~--l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSYVT----------EEMLA--LDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD 141 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-HH----------HHHHH--CHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCeeccchhH----------HHHHH--HHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence 1 2223456688888854300 00111 11223333321101225666677788777776554
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.28 Score=50.10 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH--------------hhccCCcEEEEccCCCCc---ccCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------------EITRQADIIISAVGQPNM---VRGSW 299 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--------------~~l~~ADIVIsAvG~p~~---v~~d~ 299 (371)
+.++|+|||-|.+ |..+|.+|.++|++|+.+..+...+. ....++|++|...|.+.. +. +-
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~~~~l~-~A 79 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKEHPWVQ-AA 79 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCCcHHHH-HH
Confidence 4578999999997 99999999999999999886543211 123567888887775421 11 11
Q ss_pred cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhh-----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 300 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC-----EVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 300 ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~-----~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.+.|.. ++.|.++.... ...-+ |-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~g~~-------------------vv~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 80 IASHIP-------------------VVTDIQLAFQTPEFTRYPSLG---ITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HHCCCc-------------------EEEHHHHHHhhhhcCCCCEEE---EECCCChHHHHHHHHHHHHHc
Confidence 233432 33333321100 01122 558899999999999998764
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.15 Score=53.85 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=29.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|.|||.|.+ |.++|..|+..|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999875 999999999999999999865
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.19 Score=47.37 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|++ + +|+.++..|+++|++|.++.++
T Consensus 6 ~~~~~k~~lItGas~g~G-IG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQS-IAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCc-HHHHHHHHHHHcCCEEEEEeCC
Confidence 45789999999986 5 5999999999999999988665
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.17 Score=51.44 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=31.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD 72 (370)
T PRK05600 37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLID 72 (370)
T ss_pred HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 4578999999999996 9999999999995 888885
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.42 Score=46.41 Aligned_cols=93 Identities=25% Similarity=0.324 Sum_probs=61.7
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC-------------------CC---
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-------------------KN--- 274 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t-------------------~~--- 274 (371)
++|.....+..++..++ ..|.+|+|+|.|. +|..+++++...|+. |+++.+.. .+
T Consensus 145 l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~ 222 (339)
T cd08239 145 LLCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQE 222 (339)
T ss_pred hcchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHH
Confidence 34444444555555544 3599999999865 699999999999998 87765431 11
Q ss_pred HHhhcc--CCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 275 PEEITR--QADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 275 l~~~l~--~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+.+. .+|+||.++|.+..+. -+.++++..++-+|..
T Consensus 223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 112222 5899999998765432 2457887788888854
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.22 Score=50.53 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+...+|++|+|+|+++-+|+.++..|+++|..|+.+.|.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 455789999999999999999999999999999888764
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.16 Score=53.64 Aligned_cols=71 Identities=17% Similarity=0.285 Sum_probs=51.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||+|.+ |.++|..|+..|..|++.+++. .++. .+.
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~~ 85 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DLA 85 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhC
Confidence 68999999875 9999999999999999997652 1232 357
Q ss_pred CCcEEEEccCCCCcccC-------CCcCCCeEEE-Eeee
Q 017438 281 QADIIISAVGQPNMVRG-------SWIKPGAVII-DVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~-------d~ik~gavVI-Dvgi 311 (371)
+||+||.++.-..-++. ...++++++. |..+
T Consensus 86 ~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntSt 124 (507)
T PRK08268 86 DCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSS 124 (507)
T ss_pred CCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999999875332222 2346777663 5554
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.4 Score=47.59 Aligned_cols=55 Identities=22% Similarity=0.389 Sum_probs=39.3
Q ss_pred CEEEEEcCCcccHHHHHHHhcc-C--CCeEEEEeCC-----------------------CCCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR-E--DATVSIVHSR-----------------------TKNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~-~--gAtVtv~h~~-----------------------t~~l~~~l~~ADIVIsAvG~p 292 (371)
++++|||+++.+|..++..|.. . +..++++.+. ..++.+.++++|+||.+.|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999955579999987743 2 2356665421 124567789999999999975
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.17 Score=48.31 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+|. -+|+.+|..|+++|++|.++.++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 6899999999983 35999999999999999988654
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.33 Score=49.54 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=59.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcE
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADI 284 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADI 284 (371)
+++.+.++-.+++||+|.|+|-+ +.-...++..|.++|++|.+..-.- .++.+.++.||+
T Consensus 300 ~~~~~~~~l~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~ 379 (411)
T TIGR03026 300 VVEKILDLLGPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADA 379 (411)
T ss_pred HHHHHHHHhhcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCE
Confidence 34444333246899999999952 2236788999999999999885431 467788999999
Q ss_pred EEEccCCCCcccCCC--cCC---CeEEEEe
Q 017438 285 IISAVGQPNMVRGSW--IKP---GAVIIDV 309 (371)
Q Consensus 285 VIsAvG~p~~v~~d~--ik~---gavVIDv 309 (371)
||..+..+.|-..+| +++ .-+|||.
T Consensus 380 ~v~~t~~~~~~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 380 LVILTDHDEFKDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred EEEecCCHHHhccCHHHHHHhcCCCEEEeC
Confidence 999999887743332 321 3478883
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.19 Score=46.74 Aligned_cols=37 Identities=32% Similarity=0.370 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4789999999999989999999999999999988764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.35 Score=47.10 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=41.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---HHhhcc--CCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITR--QADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---l~~~l~--~ADIVIsAvG~ 291 (371)
.++|+|.|++|.+|..++..|+++|.+|+.....-.+ +...++ +.|+||.+++.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4789999999999999999999999998865443333 333333 68999977763
|
|
| >COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.24 Score=49.47 Aligned_cols=78 Identities=26% Similarity=0.349 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 297 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~---p~~v~~- 297 (371)
|+||+|+|||.|.- |++=|+.|...|.+|+|--+.. .+.++..++||+|..-++- +.....
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 68999999999886 9999999999999999987652 3567899999999999873 222221
Q ss_pred --CCcCCCe-EEEEeeecCC
Q 017438 298 --SWIKPGA-VIIDVGINPV 314 (371)
Q Consensus 298 --d~ik~ga-vVIDvgin~~ 314 (371)
..+++|+ +.+-=|+|..
T Consensus 95 I~p~Lk~G~aL~FaHGfNih 114 (338)
T COG0059 95 IAPNLKEGAALGFAHGFNIH 114 (338)
T ss_pred hhhhhcCCceEEecccccee
Confidence 1355564 4455555554
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.1 Score=50.24 Aligned_cols=37 Identities=30% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999887654
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.25 Score=46.97 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=41.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCC---------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRT---------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.++.|||.|.+ |..++..|.+.| ..|++++++. .+..+.+.++|+||.++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999885 999999998887 6788887752 2445567899999988863
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.15 Score=50.85 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=51.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC-CCC---HHhhccCCcEEEEccCCCC--cccCCCcCCCeEEEEeee
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR-TKN---PEEITRQADIIISAVGQPN--MVRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~-t~~---l~~~l~~ADIVIsAvG~p~--~v~~d~ik~gavVIDvgi 311 (371)
-+|.|||+++.+|.-+..+|.++. .++.-..++ ..+ .++...++|+||.|++.-- -+-+...+.|..|||.+-
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 478999999999999999998876 233333222 112 2334578999999996311 122233467999999997
Q ss_pred cCC
Q 017438 312 NPV 314 (371)
Q Consensus 312 n~~ 314 (371)
.+.
T Consensus 83 dfR 85 (313)
T PRK11863 83 AHR 85 (313)
T ss_pred hhh
Confidence 764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.23 Score=46.86 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=31.3
Q ss_pred CCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||.++|.|++ .-+|+.++..|+++|++|+++.+
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 35789999999985 23599999999999999998854
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.19 Score=45.89 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++++|+++|.|+++.+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 467899999999999999999999999999888543
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.2 Score=53.92 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999998888999999999999999988664
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.44 Score=49.28 Aligned_cols=53 Identities=34% Similarity=0.310 Sum_probs=43.5
Q ss_pred cccCCHHHHHH----HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 217 FIPCTPKGCIE----LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 217 ~~PcTa~gvi~----lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
-.+.|..|+.. .++..+.+|+|++|+|=|.|+ ||.-++..|...||+|+.+.-
T Consensus 182 r~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~sd 238 (411)
T COG0334 182 RSEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVSD 238 (411)
T ss_pred CCcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEEc
Confidence 34678888554 445667789999999999999 599999999999999888753
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.32 Score=48.11 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++|+|+|.|+++.+|+.++..|+++|..|+.+.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999988999999999999999887654
|
|
| >PRK11303 DNA-binding transcriptional regulator FruR; Provisional | Back alignment and domain information |
|---|
Probab=92.22 E-value=2.9 Score=40.10 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=56.1
Q ss_pred eeeecHH----HHHHHHHHHHHHHHHhH-------h--ccCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEEe
Q 017438 81 KVIDGKA----VAKQIRDEITGEVSRMK-------D--AIGVVPGLAVILVG-DRKDSATYVRNKKKACQSVGINSFEVH 146 (371)
Q Consensus 81 ~ildGk~----la~~i~~~ik~~v~~l~-------~--~~g~~P~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~~ 146 (371)
++|+|++ ++++-++.+.+.+++|- . +.+....+++|.-. +++--....+...+.|++.|.+.....
T Consensus 19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~ 98 (328)
T PRK11303 19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC 98 (328)
T ss_pred HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 4677874 77777777777766651 0 01223345555432 233334445678889999999987654
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q 017438 147 LPEDTSEQEVLKHISVFNDDPSVHGILVQL 176 (371)
Q Consensus 147 lp~~v~~~el~~~I~~LN~D~~V~GIlVql 176 (371)
... +.+...+.++.+.. .+++||++.-
T Consensus 99 ~~~--~~~~~~~~~~~l~~-~~vdgiIi~~ 125 (328)
T PRK11303 99 SDD--QPDNEMRCAEHLLQ-RQVDALIVST 125 (328)
T ss_pred CCC--CHHHHHHHHHHHHH-cCCCEEEEcC
Confidence 432 33334456666654 3799999853
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.2 Score=50.56 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=30.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
..|++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 24 ~~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD 59 (355)
T PRK05597 24 QSLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIID 59 (355)
T ss_pred HHHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEe
Confidence 3568899999999996 9999999999995 788875
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.18 Score=46.03 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++-+|+.++..|.++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5789999999999989999999999999988776544
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.19 Score=47.32 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++|.++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~ 37 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP 37 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999999999999999999999998886653
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.19 Score=46.66 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||.++|+|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999888765
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.64 Score=43.52 Aligned_cols=94 Identities=22% Similarity=0.227 Sum_probs=61.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CC----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KN----P 275 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~----l 275 (371)
+|....++..+.+..---+|++++|.|.++.+|..++.++..+|++|++..++. .+ +
T Consensus 126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 205 (325)
T cd08253 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205 (325)
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHH
Confidence 444444555555533334799999999877789999999999999987765421 11 1
Q ss_pred Hhhc--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 276 EEIT--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ~~~l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
.+.+ +..|+++..+|.... ...++++++..++++|..
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 1222 357888888776432 123556777788888864
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.23 Score=46.28 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=30.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999998889999999999999999998765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.2 Score=47.00 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-...+++++|+|+++-+|+.++..|+++|++|+.+.|+
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 34678999999998888999999999999999876543
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.22 Score=46.02 Aligned_cols=78 Identities=26% Similarity=0.386 Sum_probs=47.5
Q ss_pred CCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhc
Q 017438 236 IKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEIT 279 (371)
Q Consensus 236 l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l 279 (371)
|+||+|+|-+. ||-.|..+|..+..+||+|+++|..+. .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 46777777643 355699999999999999999987631 233567
Q ss_pred cCCcEEEEccCCCCccc----CCCcCC---CeEEEEeeecC
Q 017438 280 RQADIIISAVGQPNMVR----GSWIKP---GAVIIDVGINP 313 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~----~d~ik~---gavVIDvgin~ 313 (371)
+++|++|.++-...|-. ..-+|+ ....+.+--+|
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~p 121 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTP 121 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-G
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeCh
Confidence 88999998887666522 234663 35777776665
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.25 Score=46.18 Aligned_cols=58 Identities=16% Similarity=0.258 Sum_probs=42.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCC-CeEEEEeee
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKP-GAVIIDVGI 311 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~-gavVIDvgi 311 (371)
+++|||..|-+|+-++..|.+.|..|+ +++||+||.|++.... .+++++ ..+|+|+|.
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~--~~~i~~~~~~v~Dv~S 60 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAA--LNYIESYDNNFVEISS 60 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHH--HHHHHHhCCeEEeccc
Confidence 689999955569999999999999886 4789999999984321 112211 237889985
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.21 Score=47.36 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999999999999999999999999988764
|
|
| >COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.19 Score=52.17 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+|+|||+|.. |--++..|.+.|++||+.-|+
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 5899999999999998 999999999999999999765
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.23 Score=45.44 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 4689999999998889999999999999998877543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.22 Score=46.42 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 3679999999999999999999999999999988765
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.2 Score=46.65 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|+|+++-+|+.++..|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999999999999999999999999998887654
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.22 Score=48.43 Aligned_cols=39 Identities=38% Similarity=0.384 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999999999999999999888653
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.3 Score=47.72 Aligned_cols=51 Identities=27% Similarity=0.413 Sum_probs=38.4
Q ss_pred EEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~p~ 293 (371)
|.|||+|. ||..++..|+.+|. +|++++.. +.+. +.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence 57899966 59999998887764 88887643 1343 45899999999998653
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.19 Score=47.74 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|.++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999998888999999999999999998775
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.38 Score=49.10 Aligned_cols=111 Identities=16% Similarity=0.149 Sum_probs=67.7
Q ss_pred CEEEEEcCCcccHHHHHHHhc-cCCC---eEEEEeCC---------------CCCHHh--hccCCcEEEEccCCC--Ccc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQ-REDA---TVSIVHSR---------------TKNPEE--ITRQADIIISAVGQP--NMV 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~-~~gA---tVtv~h~~---------------t~~l~~--~l~~ADIVIsAvG~p--~~v 295 (371)
|+|.|||+-+.||+-+..+|. +++. ++....+. .+++.+ ..++.||++.++|.- .-+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~~~~~~vDivffa~g~~~s~~~ 80 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDIDALKALDIIITCQGGDYTNEI 80 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCcccccccCCCEEEEcCCHHHHHHH
Confidence 579999999999999999888 5553 33333321 012322 467899999999852 123
Q ss_pred cCCCcCCC--eEEEEeeecCCCCCCCCCCceeecccchhhhhhh--cce--eccCCCCccHHHHHHH
Q 017438 296 RGSWIKPG--AVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV--ASA--ITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d~ik~g--avVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~--a~~--iTPVPGGVGp~T~amL 356 (371)
-+...+.| ++|||-.....-++.-+ -++-.|+.+.+.+. .++ +. .|+ ..|+.|+
T Consensus 81 ~p~~~~aG~~~~VIDnSSa~Rmd~dVP---LVVPeVN~~~i~~~~~~gi~~ia-nPN---Cst~~l~ 140 (366)
T TIGR01745 81 YPKLRESGWQGYWIDAASSLRMKDDAV---IILDPVNQDVITDGLNNGIRTFV-GGN---CTVSLML 140 (366)
T ss_pred HHHHHhCCCCeEEEECChhhhcCCCCC---EEeCCcCHHHHHhHHhCCcCeEE-CcC---HHHHHHH
Confidence 34456779 89999886654332111 35666666654432 333 22 344 4566665
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.27 Score=48.81 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=39.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------C------CHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------K------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------~------~l~~~l~~ADIVIsAvG~p 292 (371)
||.|||+|. ||.++|..|+.++. ++.+++... . +-.+.+++|||||.++|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999977 59999999988773 577765321 0 1247799999999999965
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.38 Score=47.81 Aligned_cols=75 Identities=23% Similarity=0.315 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHHh----hcc-CCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPEE----ITR-QADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~~----~l~-~ADIVIsAvG~ 291 (371)
.|++|+|.|.|. +|..+++++...|+ .|+++.++. .++.+ .+. .+|+||.++|.
T Consensus 191 ~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 191 PGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 589999999865 69999999999998 577664321 12222 221 47999999997
Q ss_pred CCcccC--CCcCCCeEEEEeeec
Q 017438 292 PNMVRG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 292 p~~v~~--d~ik~gavVIDvgin 312 (371)
+..+.. +.++++..++-+|..
T Consensus 270 ~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 270 VPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred hHHHHHHHHHHhcCCEEEEEccC
Confidence 654332 457787777778854
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.29 Score=46.29 Aligned_cols=35 Identities=14% Similarity=-0.014 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|.++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999999999999999999999999988765
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.85 E-value=0.2 Score=46.54 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999999999999999999999888765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.23 Score=52.95 Aligned_cols=38 Identities=26% Similarity=0.363 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~ 405 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG 405 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999999988899999999999999999987653
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.54 Score=47.09 Aligned_cols=56 Identities=21% Similarity=0.443 Sum_probs=42.1
Q ss_pred CCCEEEEEcC-CcccHHHHHHHhccCCC--eEEEEeC-----------------------CCCCHHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGR-SNIVGMPAALLLQREDA--TVSIVHS-----------------------RTKNPEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~-s~~VGkpla~lL~~~gA--tVtv~h~-----------------------~t~~l~~~l~~ADIVIsAvG 290 (371)
..++|+|+|+ |. ||..++..|..++. ++.+++. .+.++.+.+++||+||.+.|
T Consensus 17 ~~~KV~IiGaaG~-VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 17 PGFKVAVLGAAGG-IGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4579999999 66 69999999986552 5555532 23456788999999999999
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 96 ~~~ 98 (323)
T PLN00106 96 VPR 98 (323)
T ss_pred CCC
Confidence 653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.26 Score=45.36 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998778999999999999999887664
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.14 Score=50.60 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998889999999999999999998775
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.35 Score=48.10 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=46.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------------CCHHhhc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------KNPEEIT 279 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------------~~l~~~l 279 (371)
..+++|+.|+|-|+|.-+||.+|..++++|+++.+...+. +.+++..
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999776654321 1234556
Q ss_pred cCCcEEEEccCC
Q 017438 280 RQADIIISAVGQ 291 (371)
Q Consensus 280 ~~ADIVIsAvG~ 291 (371)
.+-||+|+.+|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 788999998884
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.57 Score=44.56 Aligned_cols=94 Identities=19% Similarity=0.196 Sum_probs=62.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------C--C----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------K--N----P 275 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------~--~----l 275 (371)
++.+...+..+...+..-.|..++|.|.++.+|..++.++..+|+.|++..++. . + +
T Consensus 120 ~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (323)
T cd05282 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRV 199 (323)
T ss_pred hccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHH
Confidence 333344444555544445789999999988889999999999999877654321 1 1 1
Q ss_pred Hhhc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 276 EEIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ~~~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
.+.+ +..|+++..+|.+... --++++++..++++|..
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 1222 3589999988865432 12467888889998854
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.37 Score=47.58 Aligned_cols=76 Identities=26% Similarity=0.353 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCC-------------------CCCHH----hhc--cCCcEEEEcc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR-------------------TKNPE----EIT--RQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~-------------------t~~l~----~~l--~~ADIVIsAv 289 (371)
-.|++|+|.|.|. +|..+++++...|++ |+.+.+. ..+.. +.+ +.+|+||.++
T Consensus 175 ~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 175 KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3599999999755 699999999999985 7665432 11221 223 2489999999
Q ss_pred CCCCcccC--CCcCCCeEEEEeeec
Q 017438 290 GQPNMVRG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 290 G~p~~v~~--d~ik~gavVIDvgin 312 (371)
|.+..+.. +.+++|..++.+|..
T Consensus 254 g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 254 GRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CCHHHHHHHHHHhccCCEEEEECCC
Confidence 97654332 357888888888864
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.37 Score=52.20 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||+|+|||+|.+ |...|..|.++|+.|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999887 999999999999999999644
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.21 Score=47.13 Aligned_cols=35 Identities=31% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999998888999999999999999988765
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.38 Score=47.90 Aligned_cols=93 Identities=25% Similarity=0.320 Sum_probs=57.7
Q ss_pred cCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh
Q 017438 219 PCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~ 278 (371)
|++..-.+.+|.. ++... |.+|+|.|+++.||..+.+++...|+++.+.-++. .++.+.
T Consensus 124 ~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~ 202 (326)
T COG0604 124 PLAGLTAWLALFDRAGLKP-GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHHhcCCCC-CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence 3333444445544 33333 99999999888899999999999996544433221 123333
Q ss_pred ----c--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 279 ----T--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 ----l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
+ +..|+|+-.+|.+.+- .-+.++++-.++.+|..
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 3 2578888888865442 23456666666677653
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.23 Score=45.40 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999999988764
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.28 Score=48.49 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.2
Q ss_pred CCCCCCCEEEEEcC---CcccHHHHHHHhccCCCeEEEE
Q 017438 233 GFDIKGKRAVVIGR---SNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 233 ~i~l~GK~vvVIG~---s~~VGkpla~lL~~~gAtVtv~ 268 (371)
+.+++||.++|-|+ +++ |+.+|..|.++||+|.++
T Consensus 4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence 46799999999999 664 999999999999999883
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.29 Score=44.58 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999988775
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.37 Score=52.21 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||+|+|||+|.+ |...|..|.++|++|+|+.+.
T Consensus 326 ~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~ 359 (654)
T PRK12769 326 SDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH 359 (654)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence 6899999999997 999999999999999999753
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.29 Score=38.15 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=29.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++|||+|-+ |--+|..|.+.|.+||++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899999885 9999999999999999999875
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.15 Score=47.11 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|.++-+|..++..|+++|++|+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 4689999999999999999999999999999888765
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.45 Score=47.04 Aligned_cols=54 Identities=30% Similarity=0.496 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC----------------------------CCHHhhccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t----------------------------~~l~~~l~~ADIVIsA 288 (371)
.+|.|+|+++.||..++..|+..|. +|+.+.++. .+ .+.+++|||||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999955579999999998874 477776421 12 2458999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99764
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.3 Score=46.65 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=40.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG 290 (371)
++++|.|+++.+|+.++..|+++|++|+++.++.. .+++.++.+|+||..++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 46999999888999999999999999998876421 23355677898887665
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.29 Score=47.18 Aligned_cols=38 Identities=32% Similarity=0.461 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|..++..|+++|++|+++.++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999989999999999999999988665
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.49 E-value=0.22 Score=47.40 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+|. -+|+.++..|+++|++|.++.++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6899999999872 35999999999999999887654
|
|
| >PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.35 Score=49.24 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=52.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCC---------------------------------CCCHHh
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSR---------------------------------TKNPEE 277 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~---------------------------------t~~l~~ 277 (371)
-.+|+|||+|.- |.++|..|.+.| .+|++..++ |.|+.+
T Consensus 11 ~~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 358999999886 999999999876 578775332 246678
Q ss_pred hccCCcEEEEccCCCCc------ccCC-CcCCCeEEEEee
Q 017438 278 ITRQADIIISAVGQPNM------VRGS-WIKPGAVIIDVG 310 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~------v~~d-~ik~gavVIDvg 310 (371)
.+++||+||.|++...+ +.+- .+++++++|-+.
T Consensus 90 av~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 90 AVEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence 89999999999985332 3321 456666666653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.27 Score=45.19 Aligned_cols=36 Identities=28% Similarity=0.310 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999988999999999999999987644
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.21 Score=46.51 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999999999999999999999988764
|
|
| >PRK10423 transcriptional repressor RbsR; Provisional | Back alignment and domain information |
|---|
Probab=91.33 E-value=3.9 Score=39.13 Aligned_cols=88 Identities=16% Similarity=0.340 Sum_probs=56.2
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017438 81 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 145 (371)
Q Consensus 81 ~ildGk~-la~~i~~~ik~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~ 145 (371)
++|+|+. ++++.++.+.+.+++| |.+| .+++|.-. +++--..+.+...+.|++.|.+....
T Consensus 17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~ 92 (327)
T PRK10423 17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC 92 (327)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 4566654 5666666665555554 4444 45555432 34555666788899999999987765
Q ss_pred eCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q 017438 146 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 175 (371)
Q Consensus 146 ~lp~~v~~~el~~~I~~LN~D~~V~GIlVq 175 (371)
... -+.++..+.++.+.+ .+|+||++.
T Consensus 93 ~~~--~~~~~~~~~~~~l~~-~~vdGiI~~ 119 (327)
T PRK10423 93 NTE--GDEQRMNRNLETLMQ-KRVDGLLLL 119 (327)
T ss_pred eCC--CCHHHHHHHHHHHHH-cCCCEEEEe
Confidence 433 344445567777655 479999996
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.30 E-value=0.25 Score=46.08 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
.++||+++|.|+++-+|+.++..|+.+|++|.+..
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~ 39 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH 39 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence 46899999999999999999999999999965554
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.28 Score=45.84 Aligned_cols=38 Identities=24% Similarity=0.204 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCc-ccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSN-IVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~-~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|.|+++ -+|+.++..|+++|++|+++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~ 52 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE 52 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH
Confidence 35789999999853 369999999999999999886643
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.42 Score=44.87 Aligned_cols=52 Identities=21% Similarity=0.408 Sum_probs=41.7
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCCcEEEEccCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~ADIVIsAvG~p 292 (371)
|+|.|++|-+|..++..|+++|.+|+...|+.. .+.+.+.+.|+||..+|.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence 589999999999999999999999999877532 1224567899999888754
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=91.23 E-value=2.6 Score=45.15 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHc-CCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc--c
Q 017438 124 SATYVRNKKKACQSV-GINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK--D 196 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~-GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K--D 196 (371)
|..=--+=..++.++ |..+.+..- .+. ..|-+.+.++-|..--+.++|.+--|... ......+.+.. .+ .
T Consensus 61 STRTR~SFE~A~~~LgGg~~i~l~~-~~ssl~kGESl~DTarvLs~y~D~d~IviR~~~~g--~~~~~~~~l~~~a~~s~ 137 (525)
T PRK13376 61 STRTKESFINAAKFHKNVKVNIFDS-EHSSFNKQESYTDTFNMLTGYSDYSIFIVRTRLEG--VCRLLEEKVSEFASRNG 137 (525)
T ss_pred CchHHHHHHHHHHHcCCCcEEEcCC-ccccCCCCcCHHHHHHHHHHcCCCcEEEEeCCccc--hhHHHHHHHHHHHHhcC
Confidence 333333456677778 888876532 211 12557777777766422238888866433 12222222221 11 1
Q ss_pred cCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCC-CeEEEEeCC-
Q 017438 197 VDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQRED-ATVSIVHSR- 271 (371)
Q Consensus 197 VDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~g-AtVtv~h~~- 271 (371)
|.-....|.| ..+.+.||=+.+ ++.+.++.|.+++|++|++||-. +-+.+.++.+|...| +.|++|+-.
T Consensus 138 vpVp~VINAg------dg~~~HPTQaLaDl~TI~E~~G~~l~glkVa~vGD~~~~rva~Sl~~~l~~~g~~~v~l~~P~~ 211 (525)
T PRK13376 138 IEVPAFINAG------DGKHEHPTQELLDEFTFLEQNNFDNSFIHIALVGDLLHGRTVHSKVNGLKIFKNVKVDLIAPEE 211 (525)
T ss_pred CCcceEEECC------CCCCCCchHHHHHHHHHHHHcCCCcCCCEEEEECCCCCCcHHHHHHHHHHhcCCcEEEEECCcc
Confidence 2111225642 134567998888 66666666668999999999995 335888888888888 899998632
Q ss_pred --------------------CCCHHhhccCCcE
Q 017438 272 --------------------TKNPEEITRQADI 284 (371)
Q Consensus 272 --------------------t~~l~~~l~~ADI 284 (371)
+.++++.+++||+
T Consensus 212 ~~~p~~~~~~a~~~G~~v~i~~d~~eav~~AD~ 244 (525)
T PRK13376 212 LAMPEHYVEKMKKNGFEVRIFSSIEEYLSQKDV 244 (525)
T ss_pred ccCCHHHHHHHHHcCCeEEEEcCHHHHhccCCc
Confidence 2567788999994
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.28 Score=47.36 Aligned_cols=36 Identities=33% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 589999999999998999999999999999988754
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.24 Score=44.70 Aligned_cols=42 Identities=29% Similarity=0.412 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
..++||.++|.|++.-+|+.++..|.++|++|.++.++...+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~ 53 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG 53 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 457899999999988779999999999999999987664433
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.31 Score=47.68 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|++.-+|+.++..|+++|++|+++.++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999998778999999999999999998764
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.48 Score=45.45 Aligned_cols=68 Identities=21% Similarity=0.360 Sum_probs=47.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------CHHhhccCCcEEEEccCCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------------NPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------------~l~~~l~~ADIVIsAvG~p~~ 294 (371)
++.|||+|.+ |..++..|.+.|.+|+++.++.. +..+ ...+|+||.++.....
T Consensus 2 ~I~IiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~~~~ 79 (304)
T PRK06522 2 KIAILGAGAI-GGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKAYQL 79 (304)
T ss_pred EEEEECCCHH-HHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEecccccH
Confidence 6899999875 99999999999999999876321 1222 3778999999986442
Q ss_pred ---cc--CCCcCCCeEEEEe
Q 017438 295 ---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDv 309 (371)
+. ...+.++++||.+
T Consensus 80 ~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 80 PAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHhhhcCCCCEEEEe
Confidence 11 1234556666654
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.41 Score=43.46 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=25.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+|+|||.|++ |-.++..|...|. ++++++.
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 31 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDF 31 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 5889999885 9999999999987 5888753
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.51 Score=47.17 Aligned_cols=55 Identities=15% Similarity=0.291 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-------eEEEEeCCC--------------------------CCHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-------TVSIVHSRT--------------------------KNPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-------tVtv~h~~t--------------------------~~l~~~l~~ADIV 285 (371)
++|.|||+++.||..++..|...|. ++.+.+... .+..+.+++||||
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5899999955579999999987763 466665421 1335779999999
Q ss_pred EEccCCCC
Q 017438 286 ISAVGQPN 293 (371)
Q Consensus 286 IsAvG~p~ 293 (371)
|.+.|.|.
T Consensus 83 vitaG~~~ 90 (322)
T cd01338 83 LLVGAKPR 90 (322)
T ss_pred EEeCCCCC
Confidence 99999753
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.72 Score=47.65 Aligned_cols=86 Identities=22% Similarity=0.187 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhh
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR--------------TKNPEEI 278 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~ 278 (371)
+.-+.+++..+.- ++||++.|+|-. +.-..+++.+|+++||+|.+..-. ..++++.
T Consensus 295 k~~~~~~i~~~~~-l~Gk~iavlgLafKpnTDD~ReSpa~~vi~~L~~~Ga~V~aYDP~a~~~~~~~~~~~~~~~~~~~~ 373 (414)
T COG1004 295 KDKLAEKILNHLG-LKGKTIAVLGLAFKPNTDDMRESPALDIIKRLQEKGAEVIAYDPVAMENAFRNFPDVELESDAEEA 373 (414)
T ss_pred HHHHHHHHHHhcC-CCCcEEEEEEEeecCCCccchhchHHHHHHHHHHCCCEEEEECchhhHHHHhcCCCceEeCCHHHH
Q ss_pred ccCCcEEEEccCCCCcccCCCcC---CCeEEEE
Q 017438 279 TRQADIIISAVGQPNMVRGSWIK---PGAVIID 308 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~v~~d~ik---~gavVID 308 (371)
++.||++|..+...+|-..+|-+ ++-+|||
T Consensus 374 ~~~aDaivi~tew~ef~~~d~~~~~m~~~~v~D 406 (414)
T COG1004 374 LKGADAIVINTEWDEFRDLDFEKLLMKTPVVID 406 (414)
T ss_pred HhhCCEEEEeccHHHHhccChhhhhccCCEEEe
|
|
| >PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2 | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.41 Score=42.88 Aligned_cols=74 Identities=24% Similarity=0.304 Sum_probs=45.8
Q ss_pred CCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC---------------------------CCCHHhhccCCcEEEEc
Q 017438 237 KGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR---------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 237 ~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~---------------------------t~~l~~~l~~ADIVIsA 288 (371)
+|+++++||-+ +-|.+.++.+|...|.+++++.-. +.++++.+++||||++-
T Consensus 1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~e~l~~aDvvy~~ 80 (158)
T PF00185_consen 1 KGLKIAYVGDGHNRVAHSLIELLAKFGMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITITDDIEEALKGADVVYTD 80 (158)
T ss_dssp TTEEEEEESSTTSHHHHHHHHHHHHTTSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEESSHHHHHTT-SEEEEE
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHcCCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEEeCHHHhcCCCCEEEEc
Confidence 46777777742 234777777777777776666321 24788999999999855
Q ss_pred cCC-C-------------Cc-ccCCCc---CCCeEEEEee
Q 017438 289 VGQ-P-------------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 289 vG~-p-------------~~-v~~d~i---k~gavVIDvg 310 (371)
.=. . .+ |+.+.+ ++++++.-..
T Consensus 81 ~~~s~~~~e~~~~~~~~~~y~v~~~~m~~a~~~~i~mH~L 120 (158)
T PF00185_consen 81 RWQSMGDKERFKRLEKFKPYQVTEELMERAKPDAIFMHPL 120 (158)
T ss_dssp SSSCTTSGGHHHHHHHHGGGSBSHHHHHTSSTT-EEEESS
T ss_pred CcccccchHHHHHHHHhcCCccCHHHHHhcCCCcEEEeCC
Confidence 422 1 03 555544 6788888776
|
1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=91.06 E-value=0.35 Score=47.57 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999887654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.34 Score=55.07 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-.||+|+|||+|.+ |...|..|.++|..|||..+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 36999999999998 999999999999999999753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=91.03 E-value=0.36 Score=47.18 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||+|+|.|+++-+|..++..|+++|++|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 678999999999988999999999999999887643
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.25 Score=45.70 Aligned_cols=34 Identities=35% Similarity=0.484 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
++++|+++|.|+++-+|..++..|+++|++|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~ 36 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH 36 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3678999999999999999999999999998775
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.27 Score=46.57 Aligned_cols=35 Identities=17% Similarity=-0.013 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 47899999999999999999999999999998764
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.25 Score=47.41 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence 689999999999999999999999999999887543
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.72 Score=46.17 Aligned_cols=57 Identities=26% Similarity=0.451 Sum_probs=42.4
Q ss_pred CCCCEEEEEcC-CcccHHHHHHHhccCC--CeEEEEeCC----------------------C-CCHHhhccCCcEEEEcc
Q 017438 236 IKGKRAVVIGR-SNIVGMPAALLLQRED--ATVSIVHSR----------------------T-KNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~-s~~VGkpla~lL~~~g--AtVtv~h~~----------------------t-~~l~~~l~~ADIVIsAv 289 (371)
++.++|+|||+ |. ||..++..|..++ .++.+++.. . .+..+.++++|+||.+.
T Consensus 6 ~~~~KI~IiGaaG~-VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 6 LKMFKVAVLGAAGG-IGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 57789999999 66 6999999998655 356665431 0 12267899999999999
Q ss_pred CCCC
Q 017438 290 GQPN 293 (371)
Q Consensus 290 G~p~ 293 (371)
|.|.
T Consensus 85 G~~~ 88 (321)
T PTZ00325 85 GVPR 88 (321)
T ss_pred CCCC
Confidence 9754
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=90.89 E-value=0.16 Score=58.06 Aligned_cols=116 Identities=16% Similarity=0.193 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-Ce-------------EEEEeCCC--------------------CC---HHhh
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-AT-------------VSIVHSRT--------------------KN---PEEI 278 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-At-------------Vtv~h~~t--------------------~~---l~~~ 278 (371)
.+.|+|+|||+|.+ |++.+..|.+.. +. |+||.... .| +.+.
T Consensus 567 ~~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 35889999999885 999999998653 34 88886331 12 4445
Q ss_pred ccCCcEEEEccCCC-Cc-ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHH
Q 017438 279 TRQADIIISAVGQP-NM-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 279 l~~ADIVIsAvG~p-~~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amL 356 (371)
++++|+||++++.. |. +-...++-|..++|..+...+. -.+ .+.++.++..-=+-=|.-|--..|+
T Consensus 646 v~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~----------~~L--~e~Ak~AGV~~m~e~GlDPGid~~l 713 (1042)
T PLN02819 646 VSQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEM----------SAL--DSKAKEAGITILCEMGLDPGIDHMM 713 (1042)
T ss_pred hcCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHH----------HHH--HHHHHHcCCEEEECCccCHHHHHHH
Confidence 57899999999853 22 4445677788888876332110 111 1334445532112234678888888
Q ss_pred HHHHHHHH
Q 017438 357 LSNTLTSA 364 (371)
Q Consensus 357 l~n~v~a~ 364 (371)
..+++...
T Consensus 714 A~~~Id~~ 721 (1042)
T PLN02819 714 AMKMIDDA 721 (1042)
T ss_pred HHHHHHhh
Confidence 88888766
|
|
| >PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.6 Score=47.78 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.+|++.|+|-|+. |+..+.+|+++|+.|+.++..
T Consensus 4 ~~~~~i~v~G~G~s-G~s~~~~l~~~G~~v~~~D~~ 38 (438)
T PRK03806 4 YQGKKVVIIGLGLT-GLSCVDFFLARGVTPRVIDTR 38 (438)
T ss_pred cCCCEEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCC
Confidence 56899999999997 999999999999999999854
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.18 Score=49.78 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
.|+.++|.|+++-+|+.+|..|+++|++|.++.|+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l 90 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL 90 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence 699999999998889999999999999999998875443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.41 Score=43.73 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=30.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 6799999999999999999999999999887754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 371 | ||||
| 4a26_A | 300 | The Crystal Structure Of Leishmania Major N5,N10- M | 3e-84 | ||
| 1dia_A | 306 | Human Methylenetetrahydrofolate Dehydrogenase Cyclo | 2e-79 | ||
| 1a4i_A | 301 | Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE | 2e-79 | ||
| 4a5o_A | 286 | Crystal Structure Of Pseudomonas Aeruginosa N5, N10 | 4e-73 | ||
| 1b0a_A | 288 | 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCL | 3e-72 | ||
| 3p2o_A | 285 | Crystal Structure Of Fold Bifunctional Protein From | 8e-71 | ||
| 3l07_A | 285 | Methylenetetrahydrofolate DehydrogenaseMETHENYLTETR | 2e-68 | ||
| 4b4u_A | 303 | Crystal Structure Of Acinetobacter Baumannii N5, N1 | 2e-67 | ||
| 2c2x_A | 281 | Three Dimensional Structure Of Bifunctional Methyle | 3e-58 | ||
| 3ngl_A | 276 | Crystal Structure Of Bifunctional 5,10-Methylenetet | 5e-45 | ||
| 1edz_A | 320 | Structure Of The Nad-Dependent 5,10- Methylenetetra | 3e-17 |
| >pdb|4A26|A Chain A, The Crystal Structure Of Leishmania Major N5,N10- Methylenetetrahydrofolate DehydrogenaseCYCLOHYDROLASE Length = 300 | Back alignment and structure |
|
| >pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase Cyclohydrolase Complexed With Nadp And Inhibitor Ly249543 Length = 306 | Back alignment and structure |
|
| >pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE Length = 301 | Back alignment and structure |
|
| >pdb|4A5O|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa N5, N10- Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Length = 286 | Back alignment and structure |
|
| >pdb|1B0A|A Chain A, 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCLOHYDROLASE FROM E COLI Length = 288 | Back alignment and structure |
|
| >pdb|3P2O|A Chain A, Crystal Structure Of Fold Bifunctional Protein From Campylobacter Jejuni Length = 285 | Back alignment and structure |
|
| >pdb|3L07|A Chain A, Methylenetetrahydrofolate DehydrogenaseMETHENYLTETRAHYDROFOLATE Cyclohydrolase, Putative Bifunctional Protein Fold From Francisella Tularensis. Length = 285 | Back alignment and structure |
|
| >pdb|4B4U|A Chain A, Crystal Structure Of Acinetobacter Baumannii N5, N10-Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Complexed With Nadp Cofactor Length = 303 | Back alignment and structure |
|
| >pdb|2C2X|A Chain A, Three Dimensional Structure Of Bifunctional Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase From Mycobacterium Tuberculosis Length = 281 | Back alignment and structure |
|
| >pdb|3NGL|A Chain A, Crystal Structure Of Bifunctional 5,10-Methylenetetrahydrofolate Dehydrogenase CYCLOHYDROLASE FROM THERMOPLASMA ACIDOPHILUM Length = 276 | Back alignment and structure |
|
| >pdb|1EDZ|A Chain A, Structure Of The Nad-Dependent 5,10- Methylenetetrahydrofolate Dehydrogenase From Saccharomyces Cerevisiae Length = 320 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 371 | |||
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 0.0 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 0.0 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 0.0 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 0.0 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 0.0 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 0.0 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 1e-172 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 1e-171 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 1e-144 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 3e-13 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 |
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Length = 301 | Back alignment and structure |
|---|
Score = 532 bits (1372), Expect = 0.0
Identities = 145/294 (49%), Positives = 201/294 (68%), Gaps = 3/294 (1%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQ 136
A A++++GK ++ QIR + +V+++K+ + G P LA++ VG+R DS Y+ K KA +
Sbjct: 2 APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAE 61
Query: 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSME 194
+GI + + LP T+E EV+K+I+ N+D +VHG LVQLPL I+ + ++NA++ E
Sbjct: 62 EIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE 121
Query: 195 KDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPA 254
KDVDG +N GRLA FIPCTPKGC+EL+ G I G+ AVV+GRS IVG P
Sbjct: 122 KDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPM 181
Query: 255 ALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314
LL +ATV+ HS+T + +E + DI++ A GQP MV+G WIKPGA++ID GIN V
Sbjct: 182 HDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYV 241
Query: 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
D K P G ++VGDV Y+EA E AS ITPVPGGVGPMT+AML+ +T+ SAKR
Sbjct: 242 PDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFL 295
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Length = 300 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 156/294 (53%), Positives = 202/294 (68%), Gaps = 3/294 (1%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQS 137
SA++IDGKA+A IR E+ +V+ +++ G VPGLA I+VG R DS YV+ K KA
Sbjct: 5 SAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAE 64
Query: 138 VGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDV 197
VG+ SF V LPED S++ + ++ N+DP+ HGI+VQLPLP H++E + + KD
Sbjct: 65 VGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDA 124
Query: 198 DGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALL 257
D P+N+G L +GREP F PCT KG I LL R G ++ GKRAVV+GRSNIVG P A L
Sbjct: 125 DALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAAL 184
Query: 258 LQREDATVSIVHS--RTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 315
L +E+ATV+IVHS T++ + R ADI+I+A+GQP V+G WIK GA ++DVG PV
Sbjct: 185 LMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVP 244
Query: 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
D GYRLVGDVC+EEA A+ I+PVPGGVGPMTIAMLL NTL + K
Sbjct: 245 DPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALG 298
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Length = 288 | Back alignment and structure |
|---|
Score = 512 bits (1322), Expect = 0.0
Identities = 143/293 (48%), Positives = 184/293 (62%), Gaps = 8/293 (2%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+AK+IDGK +A+Q+R E+ +V A PGLAV+LVG S YV +K+KAC+ V
Sbjct: 2 AAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEV 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G S LPE TSE E+L+ I N D ++ GILVQLPLP ID +L + +KDVD
Sbjct: 62 GFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP N+GRL R P PCTP+G + LL RY D G AVVIG SNIVG P ++ L
Sbjct: 122 GFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMEL 179
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
T ++ H TKN AD++I AVG+P + G WIK GA++IDVGIN +E+ K
Sbjct: 180 LLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGK 239
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
+VGDV +E+A + AS ITPVPGGVGPMT+A L+ NTL + H+ Q
Sbjct: 240 ------VVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQ 286
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Length = 286 | Back alignment and structure |
|---|
Score = 511 bits (1319), Expect = 0.0
Identities = 145/291 (49%), Positives = 189/291 (64%), Gaps = 8/291 (2%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+A++IDGKA+A +R +I V+ + VPGLAVILVG S YV +K+K C+ V
Sbjct: 4 TAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEV 63
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G S LP +TS+ ++L I NDDP++ GILVQLPLP H+D +L + +KDVD
Sbjct: 64 GFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVD 123
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP NIGRLA R PL PCTPKG + LL G D+ G AVV+G SNIVG P AL L
Sbjct: 124 GFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALEL 181
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
TV++ H T++ + +AD+++ A G+P +V+G WIK GA++IDVGIN D +
Sbjct: 182 LLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADGR 241
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
LVGDV YE A + AS ITPVPGGVGPMT A LL NTL +A+ +H+
Sbjct: 242 ------LVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD 286
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Length = 285 | Back alignment and structure |
|---|
Score = 507 bits (1309), Expect = 0.0
Identities = 130/290 (44%), Positives = 185/290 (63%), Gaps = 8/290 (2%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+ +IDGK+++K +++ + +V K + P L I+VG+ S TYV +K+KAC V
Sbjct: 3 AMILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQV 62
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI+S + LPE T+E E+L+ I N+D SVH ILVQLPLP HI++ +++ ++ EKDVD
Sbjct: 63 GIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVD 122
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP N+GRL +R + CTPKG + +L YG +G AVV+G SN+VG P + LL
Sbjct: 123 GFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLL 181
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
ATV+ H T + + T +ADI+I AVG+PN + +K GAV+IDVGIN V+
Sbjct: 182 LNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG-- 239
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
++VGDV + + +AITPVPGGVGPMTI LL NT A+ ++
Sbjct: 240 -----KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 284
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Length = 285 | Back alignment and structure |
|---|
Score = 505 bits (1304), Expect = 0.0
Identities = 145/291 (49%), Positives = 194/291 (66%), Gaps = 8/291 (2%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+ ++DGKA++ +I++E+ + +K G+ LAVILVGD S TYV++K KAC+
Sbjct: 3 AMTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEEC 61
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI S HL E+ ++ E+L I+ N D SVHGILVQLPLP HI + IL ++ KDVD
Sbjct: 62 GIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVD 121
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
GFHP+N+G L + G E F+PCTP G ++LL Y D++GK AV+IG SNIVG P A +L
Sbjct: 122 GFHPINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATML 180
Query: 259 QREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318
ATVS+ H +TK+ TRQAD+II A G N++R +K G +++DVGIN +E K
Sbjct: 181 LNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESGK 240
Query: 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
+VGDV +EE + +S ITPVPGGVGPMTIAMLL NT+ SAK N
Sbjct: 241 ------IVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRLN 285
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Length = 276 | Back alignment and structure |
|---|
Score = 478 bits (1234), Expect = e-172
Identities = 95/289 (32%), Positives = 162/289 (56%), Gaps = 16/289 (5%)
Query: 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGI 140
K++ G+ +A++ + + G + + G+ P L +I +GD + ++ Y R K + + +GI
Sbjct: 2 KILRGEEIAEKKAENLHGII----ERSGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI 57
Query: 141 NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200
++ +D S +++LK I DP ++GI+++ PLP D I+ + KDVD
Sbjct: 58 AV-DLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDAL 116
Query: 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR 260
P N G +A+ +P TP+ I+++ YG ++ RS +VG P +++L
Sbjct: 117 SPYNQGLIALN--REFLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLN 172
Query: 261 EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320
+ TVS+ HS+TK+ +TR + I++ AVG+P + + PG+V+IDVGIN V D
Sbjct: 173 RNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVND---- 228
Query: 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369
++VGD +E+ E AITPVPGGVGP+T +L N + +A+ N
Sbjct: 229 ---KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQKN 274
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Length = 281 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-171
Identities = 124/290 (42%), Positives = 170/290 (58%), Gaps = 13/290 (4%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
A ++DGKA +I ++ V+ + A G PGL ILVGD S YVR K C V
Sbjct: 2 GAIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKV 60
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
GI S LP D S + + I N +P G +VQLPLP H+DE + L V KD D
Sbjct: 61 GITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDAD 120
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258
G HP N+GRL + P +PCTP+G + LL RY I G VVIGR VG P LLL
Sbjct: 121 GLHPTNLGRLVL--GTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLL 178
Query: 259 QR--EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316
R E+ATV++ H+ T++ +TRQADI+++AVG +++ ++PGA +IDVG++ +D
Sbjct: 179 TRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD 238
Query: 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
LVGDV + + E+A ++P PGGVGP+T A LL+N + A+R
Sbjct: 239 -------GLVGDV-HPDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Length = 320 | Back alignment and structure |
|---|
Score = 410 bits (1055), Expect = e-144
Identities = 82/332 (24%), Positives = 122/332 (36%), Gaps = 64/332 (19%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+ I VA+ EI V K G P L L + + Y +K +S+
Sbjct: 5 GRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESM 64
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G L + + + I N D SV+GI+V P+ + +Q + V EKDV+
Sbjct: 65 GFRY---DLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVE 121
Query: 199 GFHPLNIGRL-------AMRGREPLFIPCTPKGCIELLHRY---------GFDIKGKRAV 242
G + + L R +PCTP +++L G + GK+ +
Sbjct: 122 GLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCI 181
Query: 243 VIGRSNIVGMPAALLLQREDATVSIVHSRTKN-------------------------PEE 277
VI RS IVG P A LL + ATV V ++
Sbjct: 182 VINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK 241
Query: 278 ITRQADIIISAVGQPN-MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE 336
+ +D++I+ V N +IK GAV I+ ++ E
Sbjct: 242 CSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNFS---------------DDVKE 286
Query: 337 VASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368
AS P+ G V TIAMLL N L + V
Sbjct: 287 KASLYVPMTGKV---TIAMLLRNMLRLVRNVE 315
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 3e-13
Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 34/164 (20%)
Query: 221 TPKGCI-ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIT 279
T +G I + F I G V+G + GM A A V + + I
Sbjct: 137 TAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIA 195
Query: 280 ----------------RQADIIISAVGQPNMVRG----SWIKPGAVIIDVGINPVEDAKS 319
R D+ I+ + P +V + + +ID+ P
Sbjct: 196 EMGMEPFHISKAAQELRDVDVCINTI--PALVVTANVLAEMPSHTFVIDLASKP------ 247
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTS 363
E+ A + +PG V P T +L++ L
Sbjct: 248 ----GGTDFRYAEKRGIKALLVPGLPGIVAPKTAGRILADVLVK 287
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 3e-08
Identities = 32/160 (20%), Positives = 52/160 (32%), Gaps = 41/160 (25%)
Query: 227 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV----------------HS 270
+ + I G + V+G GM A A V +
Sbjct: 146 LAIQHTDYTIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPF 204
Query: 271 RTKNPEEITRQADIIISAVGQPNMVRG----SWIKPGAVIIDVGINPVEDAKSPRGYRLV 326
T +E + DI I+ + P+M+ S + P +I+D+ P G
Sbjct: 205 HTDELKEHVKDIDICINTI--PSMILNQTVLSSMTPKTLILDLASRPG-------G---- 251
Query: 327 GDVCYEEACE----VASAITPVPGGVGPMTIAMLLSNTLT 362
+ E A +PG V P T +L+N L+
Sbjct: 252 ---TDFKYAEKQGIKALLAPGLPGIVAPKTAGQILANVLS 288
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 7e-06
Identities = 52/403 (12%), Positives = 106/403 (26%), Gaps = 142/403 (35%)
Query: 7 MIFADCSSSTTARLVPFG-RSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSP 65
++ + ++ F ++L L R + + L T H S
Sbjct: 248 LVLLNVQNAKAWN--AFNLSCKIL-----LTTRFK-------QVTDFLSAATTTHISLDH 293
Query: 66 SLPVMNATMASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVG----DR 121
+ K +D + + + E + P + ++ D
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRP--QDLPRE----------VLTTNP-RRLSIIAESIRDG 340
Query: 122 KDSATYVR----NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDD---P------- 167
+ + +K +N E P + +++ +SVF P
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLE---PAEY--RKMFDRLSVFPPSAHIPTILLSLI 395
Query: 168 -------------------------------SVHGILVQLPLPCHIDE-----QSILNAV 191
S+ I L L ++ +SI++
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLELKVKLENEYALHRSIVDHY 453
Query: 192 SMEKDVD-----------------GFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGF 234
++ K D G H NI R LF + + F
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE---HPERMTLF----RM----VFLDFRF 502
Query: 235 DIKGK-RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQ-- 291
++ K R N G L Q + I N + R + I+ + +
Sbjct: 503 -LEQKIRHDSTAW-NASGSILNTLQQLKFYKPYI----CDNDPKYERLVNAILDFLPKIE 556
Query: 292 PNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEA 334
N++ ++ + + ++A +EEA
Sbjct: 557 ENLICS----KYTDLLRIALMAEDEA------------IFEEA 583
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| 4b4u_A | 303 | Bifunctional protein fold; oxidoreductase; HET: NA | 100.0 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 100.0 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 100.0 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 100.0 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 100.0 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 100.0 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 100.0 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 100.0 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 100.0 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 100.0 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 99.96 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 99.95 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 99.95 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 99.95 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 99.95 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 99.94 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 99.93 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 99.93 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 99.92 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 99.91 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 99.91 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 99.91 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 99.91 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 99.88 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 99.87 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 99.86 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 99.84 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 99.59 | |
| 2dvm_A | 439 | Malic enzyme, 439AA long hypothetical malate oxido | 99.47 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.25 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 99.09 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 99.0 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 98.95 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 98.8 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 98.8 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 98.66 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.61 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 98.6 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.54 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 98.48 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 98.45 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.39 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 98.38 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 98.37 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 98.33 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.31 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.26 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 98.16 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 98.16 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.14 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 98.14 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 98.11 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 98.1 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 98.1 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 98.08 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 98.07 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 98.07 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.06 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 98.05 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 98.05 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 98.04 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 98.03 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 98.03 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 98.02 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 98.01 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 98.0 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 98.0 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 98.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.0 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 98.0 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.98 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.97 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 97.95 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 97.94 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 97.92 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 97.92 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 97.92 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 97.89 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 97.89 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 97.88 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 97.87 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.84 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 97.83 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 97.83 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 97.81 | |
| 1x7d_A | 350 | Ornithine cyclodeaminase; binds NAD+, binds L-orni | 97.81 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 97.79 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 97.75 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.73 | |
| 3nv9_A | 487 | Malic enzyme; rossmann fold, oxidoreductase; 2.25A | 97.66 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 97.65 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.61 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.58 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.56 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.56 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.54 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.49 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.49 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.46 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 97.44 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.41 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.4 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.39 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.38 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.33 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.32 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 97.31 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.29 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.28 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.27 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.27 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.25 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.21 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.19 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.13 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.09 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.08 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.06 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.06 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.06 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.04 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 96.99 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.99 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.0 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 96.94 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.91 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.88 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.87 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 96.85 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.77 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 96.72 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.69 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.64 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 96.61 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 96.61 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.6 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.57 | |
| 3csu_A | 310 | Protein (aspartate carbamoyltransferase); transfer | 96.55 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 96.55 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 96.53 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.51 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.51 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.5 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 96.5 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.49 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 96.48 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.48 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.47 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.44 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.43 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.42 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.39 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 96.35 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 96.34 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.33 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 96.31 | |
| 1pg5_A | 299 | Aspartate carbamoyltransferase; 2.60A {Sulfolobus | 96.31 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.3 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 96.29 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 96.28 | |
| 1kyq_A | 274 | Met8P, siroheme biosynthesis protein Met8; homodim | 96.27 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 96.27 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.26 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 96.25 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 96.24 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.24 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 96.24 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 96.23 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.23 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 96.23 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.2 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.2 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 96.19 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.18 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.18 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.16 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 96.16 | |
| 1ml4_A | 308 | Aspartate transcarbamoylase; beta pleated sheet, p | 96.16 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 96.14 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.13 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.13 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.12 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.11 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.11 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 96.09 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.06 | |
| 3kzn_A | 359 | Aotcase, N-acetylornithine carbamoyltransferase; t | 96.05 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 96.04 | |
| 1pjq_A | 457 | CYSG, siroheme synthase; rossman fold, nucleotide | 96.03 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.03 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 96.02 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 96.02 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 96.0 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 95.98 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 95.98 | |
| 4ekn_B | 306 | Aspartate carbamoyltransferase; atcase, aspartate | 95.98 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 95.98 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 95.95 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 95.94 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 95.93 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 95.93 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 95.92 | |
| 2ef0_A | 301 | Ornithine carbamoyltransferase; TTHA1199, thermus | 95.91 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.9 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 95.89 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.89 | |
| 1gq2_A | 555 | Malic enzyme; oxidoreductase, pigeon liver, NADP-d | 95.89 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.89 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 95.88 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 95.88 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.88 | |
| 1o0s_A | 605 | NAD-ME, NAD-dependent malic enzyme; oxidoreductase | 95.87 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 95.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 95.84 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 95.84 | |
| 1pvv_A | 315 | Otcase, ornithine carbamoyltransferase; dodecamer; | 95.83 | |
| 1duv_G | 333 | Octase-1, ornithine transcarbamoylase; enzyme-inhi | 95.83 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 95.83 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 95.81 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 95.8 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 95.79 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 95.79 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 95.79 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 95.79 | |
| 2i6u_A | 307 | Otcase, ornithine carbamoyltransferase; X-RAY crys | 95.78 | |
| 3sds_A | 353 | Ornithine carbamoyltransferase, mitochondrial; str | 95.78 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 95.78 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 95.78 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 95.77 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 95.77 | |
| 3tpf_A | 307 | Otcase, ornithine carbamoyltransferase; structural | 95.77 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 95.76 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 95.76 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 95.74 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 95.74 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 95.74 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 95.73 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 95.73 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 95.72 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 95.71 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 95.71 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 95.7 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 95.7 | |
| 1vlv_A | 325 | Otcase, ornithine carbamoyltransferase; TM1097, st | 95.67 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 95.67 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 95.67 | |
| 4a8t_A | 339 | Putrescine carbamoyltransferase; trabnsferase PALO | 95.67 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 95.66 | |
| 4f2g_A | 309 | Otcase 1, ornithine carbamoyltransferase 1; struct | 95.66 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 95.66 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 95.66 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.66 | |
| 1dxh_A | 335 | Ornithine carbamoyltransferase; transcarbamylase; | 95.66 | |
| 4ep1_A | 340 | Otcase, ornithine carbamoyltransferase; structural | 95.64 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 95.63 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 95.63 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 95.63 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 95.63 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 95.63 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 95.62 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 95.62 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 95.62 | |
| 3r7f_A | 304 | Aspartate carbamoyltransferase; aspartate transcar | 95.62 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 95.62 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 95.61 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 95.61 | |
| 3gd5_A | 323 | Otcase, ornithine carbamoyltransferase; structural | 95.61 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 95.6 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 95.6 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.59 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 95.59 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 95.59 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 95.59 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 95.58 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 95.57 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 95.57 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 95.57 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 95.57 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 95.56 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 95.56 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 95.56 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 95.56 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 95.55 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 95.55 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 95.54 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 95.54 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 95.52 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 95.51 | |
| 1pj3_A | 564 | NAD-dependent malic enzyme, mitochondrial; oxidati | 95.51 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 95.5 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 95.5 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.49 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 95.49 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 95.49 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 95.48 | |
| 3fr7_A | 525 | Putative ketol-acid reductoisomerase (OS05G057370 | 95.47 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.46 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 95.45 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 95.45 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 95.44 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 95.44 | |
| 4a8p_A | 355 | Putrescine carbamoyltransferase; ornithine agmatin | 95.44 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 95.44 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 95.43 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 95.43 | |
| 2w37_A | 359 | Ornithine carbamoyltransferase, catabolic; transca | 95.42 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 95.42 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 95.42 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 95.42 | |
| 3d6n_B | 291 | Aspartate carbamoyltransferase; reactor, chamber, | 95.41 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 95.41 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 95.41 | |
| 4h31_A | 358 | Otcase, ornithine carbamoyltransferase; structural | 95.4 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 95.4 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 95.39 | |
| 1oth_A | 321 | Protein (ornithine transcarbamoylase); transferase | 95.38 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 95.38 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 95.38 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 95.38 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 95.37 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 95.36 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 95.34 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 95.33 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 95.33 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 95.31 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 95.31 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 95.29 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 95.26 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 95.26 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 95.26 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 95.26 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 95.26 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 95.26 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 95.25 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 95.25 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 95.25 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 95.23 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 95.23 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 95.23 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.23 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 95.22 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 95.21 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.21 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 95.19 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 95.19 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 95.19 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 95.19 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 95.18 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 95.17 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 95.17 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 95.15 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 95.14 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 95.11 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 95.11 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 95.1 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 95.09 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 95.08 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 95.08 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 95.06 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.04 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 95.04 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 95.03 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 95.02 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 95.01 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 94.99 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 94.98 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 94.97 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 94.97 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 94.96 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 94.96 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 94.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 94.94 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 94.94 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 94.92 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 94.91 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 94.91 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 94.89 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 94.89 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 94.88 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 94.88 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 94.87 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 94.87 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 94.87 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 94.87 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 94.84 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 94.83 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 94.82 | |
| 4amu_A | 365 | Ornithine carbamoyltransferase, catabolic; ornithi | 94.82 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 94.82 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 94.81 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 94.81 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 94.8 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.79 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 94.79 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 94.79 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 94.78 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 94.78 | |
| 3eag_A | 326 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME | 94.78 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 94.78 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 94.77 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 94.75 | |
| 2x5o_A | 439 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; A | 94.75 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 94.74 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 94.74 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 94.74 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 94.73 | |
| 3q98_A | 399 | Transcarbamylase; rossmann fold, transferase; 2.00 | 94.72 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 94.72 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 94.72 | |
| 4hv4_A | 494 | UDP-N-acetylmuramate--L-alanine ligase; MURC, yers | 94.72 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 94.71 | |
| 3dfu_A | 232 | Uncharacterized protein from 6-phosphogluconate de | 94.71 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 94.7 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 94.7 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 94.69 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 94.68 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 94.68 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 94.68 | |
| 3grf_A | 328 | Ornithine carbamoyltransferase; ornithine transcar | 94.67 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 94.66 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 94.65 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 94.65 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 94.65 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 94.65 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 94.64 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 94.63 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 94.63 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 94.63 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 94.63 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 94.61 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 94.59 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 94.59 | |
| 2yfk_A | 418 | Aspartate/ornithine carbamoyltransferase; transcar | 94.59 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 94.58 | |
| 1gtm_A | 419 | Glutamate dehydrogenase; oxidoreductase, NAD, NADP | 94.58 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 94.57 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 94.57 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 94.56 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 94.56 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 94.54 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 94.52 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 94.51 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 94.5 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 94.49 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 94.49 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.49 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 94.47 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 94.47 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 94.45 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 94.42 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 94.42 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 94.41 | |
| 2i76_A | 276 | Hypothetical protein; NADP, dehydrogenase, TM1727, | 94.41 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 94.4 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 94.4 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 94.4 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 94.4 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 94.4 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 94.4 | |
| 3aog_A | 440 | Glutamate dehydrogenase; NAD(H), oxidoreducta; HET | 94.39 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 94.38 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 94.37 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 94.37 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 94.36 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 94.36 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 94.34 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 94.33 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 94.31 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 94.3 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 94.28 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 94.27 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 94.25 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 94.25 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 94.25 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 94.25 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 94.23 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 94.23 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 94.17 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 94.17 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 94.17 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 94.16 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 94.14 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 94.13 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 94.12 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 94.1 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 94.1 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 94.09 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 94.08 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 94.08 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 94.07 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 94.07 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 94.06 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 94.05 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 94.03 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 94.01 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 94.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 94.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 93.96 |
| >4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-97 Score=717.60 Aligned_cols=281 Identities=46% Similarity=0.783 Sum_probs=275.5
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
|+|||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 23 a~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~ 102 (303)
T 4b4u_A 23 ALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAE 102 (303)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHH
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHH
Confidence 79999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|.|+|+.| ++.|+||||.||+++|++|+++++||
T Consensus 103 I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g--~~~~~PcTp~gv~~lL~~~~i~l~Gk 180 (303)
T 4b4u_A 103 IEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMTILKENNIEIAGK 180 (303)
T ss_dssp HHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTT--CCCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCC--CCcccCccHHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 68999999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||++++|+++|||||+||++|+||++++++|||||+|+|+|++|++||||||++|||+|+|+.++
T Consensus 181 ~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDVGin~~~~--- 257 (303)
T 4b4u_A 181 HAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDG--- 257 (303)
T ss_dssp EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGSCTTCEEEECCCBCCTT---
T ss_pred EEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccccccccCCCEEEEeceecCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++|||||++++++|++||||||||||||++|||+|+++|+|++.|
T Consensus 258 ----~~vGDVdf~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa~r~~G 303 (303)
T 4b4u_A 258 ----GGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKALG 303 (303)
T ss_dssp ----SCBCSBCCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ----CeECCcCHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999999999999999999999999876
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-93 Score=689.94 Aligned_cols=291 Identities=53% Similarity=0.901 Sum_probs=282.6
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccC-CCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIG-VVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g-~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
|++||||++|++|++++++++++|+++++ ++|+||+|+||+||+|..|+++|.|+|+++||++++++||++++|+||++
T Consensus 6 a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~ 85 (300)
T 4a26_A 6 AQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEV 85 (300)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHH
T ss_pred cEEeehHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 68999999999999999999999998877 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|+..++|+||||.|++++|++|+++++|
T Consensus 86 ~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~i~l~G 165 (300)
T 4a26_A 86 NVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAG 165 (300)
T ss_dssp HHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHTCCCTT
T ss_pred HHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987546899999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH--hhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--EITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|+|||||++||+|+|++|+++||+||+||++|.+++ +++++|||||+|+|.|++|+++|+|||++|||+|+|++++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~ 245 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPD 245 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCEEESC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEeccCCcC
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999988
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+++++|+|++|||||+++.++|+|||||||||||||++|||+|+++++++|.+.
T Consensus 246 ~~~~~g~kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~ 299 (300)
T 4a26_A 246 PSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALGV 299 (300)
T ss_dssp SCSTTSCEEECSBCHHHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCceeecCccHHHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence 766677899999999999999999999999999999999999999999999875
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-93 Score=688.51 Aligned_cols=294 Identities=49% Similarity=0.844 Sum_probs=274.5
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEV 156 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el 156 (371)
|++++||||++|++|++++++++++|++++ +++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||
T Consensus 2 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~el 81 (301)
T 1a4i_A 2 APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEV 81 (301)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHH
T ss_pred CCCEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence 668899999999999999999999999885 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCC--CCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCC
Q 017438 157 LKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGF 234 (371)
Q Consensus 157 ~~~I~~LN~D~~V~GIlVqlPLp~~--i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i 234 (371)
++.|++||+|++|||||||+|||+| +|+++++++|+|+||||||||+|.|+|+.|..+++|+||||.|++++|++|++
T Consensus 82 l~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~~i 161 (301)
T 1a4i_A 82 MKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGV 161 (301)
T ss_dssp HHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTC
T ss_pred HHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHcCC
Confidence 9999999999999999999999999 99999999999999999999999999998743479999999999999999999
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~ 314 (371)
+++||+|+|||+|++||+|+|++|+++|||||+||++|++|++++++|||||+|+|+|++|+++|+|||++|||+|+|++
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYV 241 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+++++.+|+|++|||||+++.++|++||||||||||||++|||+|+++++++|+..|
T Consensus 242 ~d~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa~~~~~~~ 298 (301)
T 1a4i_A 242 PDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLEKF 298 (301)
T ss_dssp ---------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred ccccccCCCeeeccccHHHhhhhceEeCCCCCCccHHHHHHHHHHHHHHHHHHhhcc
Confidence 765555567899999999999999999999999999999999999999999887643
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-92 Score=683.09 Aligned_cols=284 Identities=52% Similarity=0.840 Sum_probs=276.1
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|+|++||||++|++|++++++++++|+++++++|+||+|+||+||+|+.|+++|.|+|+++||++++++||++++|+||+
T Consensus 3 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell 82 (286)
T 4a5o_A 3 MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLL 82 (286)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHH
T ss_pred cccEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence 66889999999999999999999999988788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|.|+|+.| +++|+||||.|++++|++|+++++
T Consensus 83 ~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g--~~~~~PcTp~gv~~lL~~~~i~l~ 160 (286)
T 4a5o_A 83 ALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQR--MPLLRPCTPKGIMTLLASTGADLY 160 (286)
T ss_dssp HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 678999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|+|++|+++||+||+||++|++|++++++|||||+|+|+|++|++||+|||++|||+|+|++++
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~- 239 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQAD- 239 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCSSCC-
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHcCCCeEEEEeccccccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 240 ----g-kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~~~ 286 (286)
T 4a5o_A 240 ----G-RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD 286 (286)
T ss_dssp ----C-CSSCSBCHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ----C-CcccCccHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence 3 8999999999999999999999999999999999999999999864
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-92 Score=679.88 Aligned_cols=285 Identities=50% Similarity=0.819 Sum_probs=275.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|+++++++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell 80 (288)
T 1b0a_A 1 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELL 80 (288)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHH
T ss_pred CCCeEecHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34789999999999999999999999988658899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|+.| .++|+||||.|++++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~ 158 (288)
T 1b0a_A 81 ELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTF 158 (288)
T ss_dssp HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||+|++||+|+|++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|+|||++|||+|+|+.++
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r~~~- 237 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLEN- 237 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECTT-
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| |++|||||++++++|++||||||||||||++|||+|+++++++|+..
T Consensus 238 ----g-~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~ 285 (288)
T 1b0a_A 238 ----G-KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDP 285 (288)
T ss_dssp ----S-CEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ----C-CccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHhhcc
Confidence 3 89999999999999999999999999999999999999999998764
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-91 Score=676.30 Aligned_cols=281 Identities=51% Similarity=0.816 Sum_probs=272.2
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++ |.+|+||+|+||+||+|..|+++|.|+|+++||++++++||++++|+||++.
T Consensus 4 ~~iidGk~~a~~i~~~~~~~v~~l~~~-~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~ 82 (285)
T 3p2o_A 4 MTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLAL 82 (285)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHH
Confidence 479999999999999999999999877 5599999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc-cccCCHHHHHHHHHHhCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL-FIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~-~~PcTa~gvi~lL~~~~i~l~G 238 (371)
|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.| .+. |+||||.|++++|++|+++++|
T Consensus 83 I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g--~~~g~~PcTp~gv~~lL~~~~i~l~G 160 (285)
T 3p2o_A 83 INTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLG--LESGFLPCTPLGVMKLLKAYEIDLEG 160 (285)
T ss_dssp HHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTT--CCSSCCCHHHHHHHHHHHHTTCCCTT
T ss_pred HHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcC--CCCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 456 9999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~ 318 (371)
|+|+|||||++||+|+|++|+++|||||+|||+|+++++++++|||||+|+|+|++|++||+|||++|||+|+|++++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~~-- 238 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES-- 238 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEECTT--
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCcccC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 239 ---g-kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~~~ 285 (285)
T 3p2o_A 239 ---G-KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRLN 285 (285)
T ss_dssp ---S-CEECSBCHHHHTTTEEEECCSSSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred ---C-CEeccccHHHHHhhheEeCCCCCcCcHHHHHHHHHHHHHHHHHhhC
Confidence 3 8999999999999999999999999999999999999999998874
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-91 Score=672.38 Aligned_cols=281 Identities=47% Similarity=0.799 Sum_probs=272.9
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++++++|+||+|+||+||+|..|+++|.|+|+++||++++++||++++|+||++.
T Consensus 4 ~~ildGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~ 83 (285)
T 3l07_A 4 MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLEL 83 (285)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHH
Confidence 47999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|.|+|+.|. .++|+||||.|++++|++|+++++||
T Consensus 84 I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~-~~~~~PcTp~gv~~lL~~~~i~l~Gk 162 (285)
T 3l07_A 84 IDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGA 162 (285)
T ss_dssp HHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTC-TTCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999772 28899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||+|++||+|+|++|+++||+||+|||+|+++++++++|||||+|+|+|++|++||+|||++|||+|+|+++
T Consensus 163 ~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~---- 238 (285)
T 3l07_A 163 YAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD---- 238 (285)
T ss_dssp EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEEET----
T ss_pred EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccCcC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus 239 --g-~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~~ 284 (285)
T 3l07_A 239 --G-KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 284 (285)
T ss_dssp --T-EEECSBCHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHHHHTC
T ss_pred --C-ceecCccHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHHHHhh
Confidence 2 899999999999999999999999999999999999999998864
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-89 Score=657.02 Aligned_cols=272 Identities=34% Similarity=0.670 Sum_probs=264.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++| |++|+||+|+||+||+|..|+++|.|+|+++|| ++.++||++++|+||++.|
T Consensus 2 ~ildGk~~a~~i~~~~~~~v~~l----~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I 76 (276)
T 3ngx_A 2 KILRGEEIAEKKAENLHGIIERS----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRI 76 (276)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHT----TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHH
T ss_pred EEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999988 789999999999999999999999999999999 9999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||||++|.|+|+.| +++|+||||.|++++|++|+ ++||+
T Consensus 77 ~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g--~~~~~PcTp~gv~~lL~~~~--l~Gk~ 152 (276)
T 3ngx_A 77 DDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALN--REFLVPATPRAVIDIMDYYG--YHENT 152 (276)
T ss_dssp HHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHHT--CCSCE
T ss_pred HHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcC--CCCCCCCcHHHHHHHHHHhC--cCCCE
Confidence 999999999999999999999999999999999999999999999999987 68999999999999999999 99999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||+|++||+|+|++|+++||+||+||++|+++++++++|||||+|+|+|++|+++|+|||++|||+|+|+ ++
T Consensus 153 vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~-~~---- 227 (276)
T 3ngx_A 153 VTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-VN---- 227 (276)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEE-ET----
T ss_pred EEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccHhhccCCcEEEEeccCc-cC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 44
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||++++++|++||||||||||||++|||+|++++++++.
T Consensus 228 -g-kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~n~v~a~~~~~ 273 (276)
T 3ngx_A 228 -D-KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQK 273 (276)
T ss_dssp -T-EEECSBCHHHHHTTSSEECCTTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -C-ceeccccHHHHhhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 3 899999999999999999999999999999999999999998764
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=654.40 Aligned_cols=276 Identities=45% Similarity=0.794 Sum_probs=269.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 3 a~iidGk~ia~~i~~~~~~~v~~l~~~-g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~ 81 (281)
T 2c2x_A 3 AIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNET 81 (281)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred CEEeeHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 579999999999999999999999987 7889999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|+.| .++|+||||.|++++|++|+++++||
T Consensus 82 i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~gk 159 (281)
T 2c2x_A 82 IDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLG--TPAPLPCTPRGIVHLLRRYDISIAGA 159 (281)
T ss_dssp HHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHT--CCCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCC--CCCCCCChHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 57999999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
+|+|||+|++||+|++++|+++ |||||+|||+|+++++++++|||||+|+|+|++|++||+|||++|||+|+|++++
T Consensus 160 ~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r~~~- 238 (281)
T 2c2x_A 160 HVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD- 238 (281)
T ss_dssp EEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEEETT-
T ss_pred EEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCCCCC-
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHH
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~ 366 (371)
| ++|||| +++.++|++||||||||||||++|||+|+++++++
T Consensus 239 ----g--lvGDVd-~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~ 280 (281)
T 2c2x_A 239 ----G--LVGDVH-PDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280 (281)
T ss_dssp ----E--EEESBC-GGGGGTCSEEECSSSSSHHHHHHHHHHHHHHHHHH
T ss_pred ----C--ccCccc-cchhhheeeecCCCCCccHHHHHHHHHHHHHHHHh
Confidence 3 999999 99999999999999999999999999999999985
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-74 Score=565.94 Aligned_cols=271 Identities=29% Similarity=0.393 Sum_probs=251.7
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccC-CCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIG-VVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEV 156 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g-~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el 156 (371)
|++++||||++|++|++++++++++|+++++ ++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++ +||
T Consensus 3 ~~~~~idgk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l 79 (320)
T 1edz_A 3 KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFL 79 (320)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGH
T ss_pred CCCEEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHH
Confidence 6688999999999999999999999998754 789999999999999999999999999999999999999965 779
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCC-------ccccccCCHHHHHHHH
Q 017438 157 LKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGR-------EPLFIPCTPKGCIELL 229 (371)
Q Consensus 157 ~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~-------~~~~~PcTa~gvi~lL 229 (371)
++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|.|+|+.|.+ .++|+||||.|++++|
T Consensus 80 ~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll 159 (320)
T 1edz_A 80 EEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKIL 159 (320)
T ss_dssp HHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987621 2689999999999999
Q ss_pred HH---------hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-----------------------C--CCH
Q 017438 230 HR---------YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-----------------------T--KNP 275 (371)
Q Consensus 230 ~~---------~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-----------------------t--~~l 275 (371)
++ |+++++||+|+|||+|++||+++|++|+++||+||+|+++ + .++
T Consensus 160 ~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L 239 (320)
T 1edz_A 160 EFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL 239 (320)
T ss_dssp HHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHH
T ss_pred HhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHH
Confidence 99 7999999999999999999999999999999999999553 3 689
Q ss_pred HhhccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHH
Q 017438 276 EEITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIA 354 (371)
Q Consensus 276 ~~~l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a 354 (371)
++++++|||||+|||+|++ |+.+|+|+|++|||+|+++ |+| +++.+++++|||| |||||++
T Consensus 240 ~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r--------------D~d-~~v~~~a~~itPv---VGpmT~a 301 (320)
T 1edz_A 240 KKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTK--------------NFS-DDVKEKASLYVPM---TGKVTIA 301 (320)
T ss_dssp HHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC--------------CBC-GGGGTTEEEEESC---CHHHHHH
T ss_pred HHHhccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc--------------ccc-hhHHhhCCeeCCC---ccHHHHH
Confidence 9999999999999999998 9999999999999999874 333 3678899999998 9999999
Q ss_pred HHHHHHHHHHHHHhc
Q 017438 355 MLLSNTLTSAKRVHN 369 (371)
Q Consensus 355 mLl~n~v~a~~~~~~ 369 (371)
|||+|+++++++.+.
T Consensus 302 ~Ll~n~~~a~~~~~~ 316 (320)
T 1edz_A 302 MLLRNMLRLVRNVEL 316 (320)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999986653
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-30 Score=243.45 Aligned_cols=220 Identities=18% Similarity=0.214 Sum_probs=180.8
Q ss_pred eCCCcchHHHHH-HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017438 118 VGDRKDSATYVR-NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 195 (371)
Q Consensus 118 vG~d~aS~~Yv~-~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 195 (371)
+| +|-+++|-. ..+++|+++|+++.|..|+ +++++|.+.|+.++ +++++|++||+|+|.++ ..+++.++| .|
T Consensus 7 iG-~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~-~~~~~G~nVT~P~K~~~--~~~ld~~~~~A~ 80 (271)
T 1nyt_A 7 FG-NPIAHSKSPFIHQQFAQQLNIEHPYGRVL--APINDFINTLNAFF-SAGGKGANVTVPFKEEA--FARADELTERAA 80 (271)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHH-HTTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred EC-CCcccccCHHHHHHHHHHCCCCcEEEEEE--cCHHHHHHHHHHHH-hCCCCeEEEccCCHHHH--HHHHhhcCHHHH
Confidence 45 577777766 7899999999999999995 77889999999999 57999999999999743 678888889 59
Q ss_pred ccCccCcc---hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 196 DVDGFHPL---NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 196 DVDgl~~~---N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++++.+ +.|++. |++ +++.|+++.|++++++++||+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 81 ~igavNti~~~~~g~l~-G~n------tD~~G~~~~L~~~~~~l~~k~vlViGaGg~-g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 81 LAGAVNTLMRLEDGRLL-GDN------TDGVGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp HHTCCSEEEECTTSCEE-EEC------CHHHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSH
T ss_pred HhCCceEEEEcCCCeEE-EeC------CCHHHHHHHHHhcCcCcCCCEEEEECCcHH-HHHHHHHHHHcCCEEEEEECCH
Confidence 99999776 567775 654 456999999999999999999999999985 9999999999999999999874
Q ss_pred CC---HHh--------------hc--cCCcEEEEccCCCCc-----ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecc
Q 017438 273 KN---PEE--------------IT--RQADIIISAVGQPNM-----VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGD 328 (371)
Q Consensus 273 ~~---l~~--------------~l--~~ADIVIsAvG~p~~-----v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GD 328 (371)
.. +.+ .+ .++|+||+++|.+.. ++.++++++.+|+|+.|+|.++ +
T Consensus 153 ~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t-------~---- 221 (271)
T 1nyt_A 153 SRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKT-------P---- 221 (271)
T ss_dssp HHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCC-------H----
T ss_pred HHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCC-------H----
Confidence 22 111 11 379999999996543 6778899999999999998654 2
Q ss_pred cchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 329 VCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 329 Vd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|...++.+|+ +|+.+|.+ ||++|.+++|++|+|.
T Consensus 222 --~~~~a~~~G~-~~~~~G~~-----mLv~Q~~~af~~w~g~ 255 (271)
T 1nyt_A 222 --FLAWCEQRGS-KRNADGLG-----MLVAQAAHAFLLWHGV 255 (271)
T ss_dssp --HHHHHHHTTC-CEEECTHH-----HHHHHHHHHHHHHHSS
T ss_pred --HHHHHHHcCC-CeecCCHH-----HHHHHHHHHHHHHhCC
Confidence 3344666776 33667766 9999999999999985
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-29 Score=236.35 Aligned_cols=219 Identities=18% Similarity=0.215 Sum_probs=180.2
Q ss_pred EeCCCcchHHHHHHH-HHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-c
Q 017438 117 LVGDRKDSATYVRNK-KKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E 194 (371)
Q Consensus 117 ~vG~d~aS~~Yv~~k-~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~ 194 (371)
.+| +|.+++|-..+ +++|+++|+++.|..|+ +++++|.+.|+.+|++ +++|++||+|+|.++ ..+++.+++ .
T Consensus 16 viG-~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~--~~~~~l~~~i~~l~~~-~~~G~nVtiP~k~~i--~~~~d~~~~~a 89 (287)
T 1nvt_A 16 LIG-HPVEHSFSPIMHNAAFKDKGLNYVYVAFD--VLPENLKYVIDGAKAL-GIVGFNVTIPHKIEI--MKYLDEIDKDA 89 (287)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCGGGGGGHHHHHHHH-TCCEEEECTTSTTGG--GGGCSEECHHH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--cCHHHHHHHHHHHHhC-CCCEEEEccCCHHHH--HHHHHhcCHHH
Confidence 456 68889998887 99999999999999994 7889999999999965 899999999999865 567778888 6
Q ss_pred cccCccCcc--hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 195 KDVDGFHPL--NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 195 KDVDgl~~~--N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++++++++ +.|++. |+++ |+.|+++.|++++++++||+++|+|+|+ +|++++..|+++| +|++++|+.
T Consensus 90 ~~igavnt~~~~~g~l~-g~nT------d~~G~~~~L~~~~~~l~~k~vlV~GaGg-iG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 90 QLIGAVNTIKIEDGKAI-GYNT------DGIGARMALEEEIGRVKDKNIVIYGAGG-AARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp HHHTCCCEEEEETTEEE-EECC------HHHHHHHHHHHHHCCCCSCEEEEECCSH-HHHHHHHHHTSSS-EEEEECSSH
T ss_pred HHhCceeeEEeeCCEEE-EecC------CHHHHHHHHHHhCCCcCCCEEEEECchH-HHHHHHHHHHHCC-CEEEEECCH
Confidence 999998765 467765 5433 6699999999999999999999999996 4999999999999 999999874
Q ss_pred CC---H---------------------HhhccCCcEEEEccCCCC-------cc-cCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 273 KN---P---------------------EEITRQADIIISAVGQPN-------MV-RGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 273 ~~---l---------------------~~~l~~ADIVIsAvG~p~-------~v-~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
.. + .+.+.++|+||+++|... .+ +.++++++.+|+|++|+|.++
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t---- 236 (287)
T 1nvt_A 161 EKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLET---- 236 (287)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSC----
T ss_pred HHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccC----
Confidence 31 1 234567999999998533 24 678999999999999998655
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
++.. .++.+|+. +.+|++ ||++|.+++|+.|+|.
T Consensus 237 ---~ll~------~a~~~G~~--~~~Gl~-----mL~~Qa~~af~~w~g~ 270 (287)
T 1nvt_A 237 ---VLLK------EAKKVNAK--TINGLG-----MLIYQGAVAFKIWTGV 270 (287)
T ss_dssp ---HHHH------HHHTTTCE--EECTHH-----HHHHHHHHHHHHHHSS
T ss_pred ---HHHH------HHHHCCCE--EeCcHH-----HHHHHHHHHHHHHhCC
Confidence 4443 35667774 455665 9999999999999985
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=233.33 Aligned_cols=209 Identities=13% Similarity=0.145 Sum_probs=172.0
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc---hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL---NI 205 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~---N~ 205 (371)
.-+++|+++|+++.|..|+ +++++|.+.|+.++ +++++|++||+|+|.+ ...+++.++| .|++++++.+ +.
T Consensus 19 ~hn~~~~~~gl~~~y~~~~--~~~~~l~~~i~~~~-~~~~~G~nVT~P~K~~--v~~~ld~~~~~A~~igavNti~~~~~ 93 (272)
T 1p77_A 19 IQNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFF-EEGAKGCNITSPFKER--AYQLADEYSQRAKLAEACNTLKKLDD 93 (272)
T ss_dssp HHHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHH-HTTCCEEEECTTCHHH--HHHHCSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHHCCcCeEEEEEE--cCHHHHHHHHHHHH-hCCCCEEEECcCCHHH--HHHHHhhcCHHHHHhCCceEEEEccC
Confidence 4578999999999999995 77889999999999 5799999999999974 4788999999 5999999876 67
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---HH------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PE------ 276 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---l~------ 276 (371)
|++. |+++++ .|+++.|++++++++||+++|+|+|++ |++++..|.+.|++|++++|+... +.
T Consensus 94 g~l~-g~NTD~------~G~~~~L~~~~~~~~~~~vlvlGaGg~-g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~ 165 (272)
T 1p77_A 94 GKLY-ADNTDG------IGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY 165 (272)
T ss_dssp SCEE-EECCHH------HHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred CEEE-EecCCH------HHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc
Confidence 8876 666664 999999999999999999999999985 999999999999999999997421 11
Q ss_pred --------hhc-c-CCcEEEEccCCCCc-----ccCCCcCCCeEEEEeeecCCC-CCCCCCCceeecccchhhhhhhcce
Q 017438 277 --------EIT-R-QADIIISAVGQPNM-----VRGSWIKPGAVIIDVGINPVE-DAKSPRGYRLVGDVCYEEACEVASA 340 (371)
Q Consensus 277 --------~~l-~-~ADIVIsAvG~p~~-----v~~d~ik~gavVIDvgin~~~-~~~~~~g~kl~GDVd~~~v~~~a~~ 340 (371)
+.+ + ++|+||+++|.+.. ++.++++++.+|+|+.|+|.+ + .|...++.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t-------------~ll~~a~~~G~ 232 (272)
T 1p77_A 166 GNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDT-------------PFIALCKSLGL 232 (272)
T ss_dssp SCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCC-------------HHHHHHHHTTC
T ss_pred CCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCC-------------HHHHHHHHcCC
Confidence 122 3 89999999996543 556778889999999998865 4 23334667787
Q ss_pred eccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 341 ITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 341 iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.|+++| ..||++|.+++|+.|+|.
T Consensus 233 ~~~v~G------~~mLv~Qa~~af~~w~g~ 256 (272)
T 1p77_A 233 TNVSDG------FGMLVAQAAHSFHLWRGV 256 (272)
T ss_dssp CCEECS------HHHHHHHHHHHHHHHHSC
T ss_pred CEeeCC------HHHHHHHHHHHHHHHhCC
Confidence 656774 459999999999999985
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=231.08 Aligned_cols=219 Identities=18% Similarity=0.242 Sum_probs=182.6
Q ss_pred eCCCcchHHHHHHHH-HHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017438 118 VGDRKDSATYVRNKK-KACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 195 (371)
Q Consensus 118 vG~d~aS~~Yv~~k~-k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 195 (371)
+| +|.+++|...+. ++|+++|+++.|..|+ +++++|.+.|+.++. ++++|++||+|+|.++ ..+++.++| .|
T Consensus 29 iG-~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~--~~~~~l~~~v~~l~~-~~~~G~nVTiP~K~~i--~~~ld~~~~~A~ 102 (297)
T 2egg_A 29 IG-FPVEHSLSPLMHNDAFARLGIPARYHLFS--VEPGQVGAAIAGVRA-LGIAGVNVTIPHKLAV--IPFLDEVDEHAR 102 (297)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCTTCHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSEECHHHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHhh-CCCCeEEECCcCHHHH--HHHHHHHhHHHH
Confidence 46 588888888776 8999999999999995 677899999999984 5899999999999866 678899999 59
Q ss_pred ccCccCcc--hhhhhccCCCccccccCCHHHHHHHHHHhC-CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 196 DVDGFHPL--NIGRLAMRGREPLFIPCTPKGCIELLHRYG-FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 196 DVDgl~~~--N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~-i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
++++++.+ +.|++. |+++++ .|+++.|++++ ++++||+|+|+|+|++ |++++..|.+.|+ +|++++|+
T Consensus 103 ~iGavNti~~~~g~l~-g~nTd~------~G~~~~l~~~~~~~l~~~~vlVlGaGg~-g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 103 RIGAVNTIINNDGRLV-GYNTDG------LGYVQALEEEMNITLDGKRILVIGAGGG-ARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp HHTCCCEEEEETTEEE-EECCHH------HHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTTCSEEEEECSS
T ss_pred HhCCCCeEECcCCeEe-eccCCH------HHHHHHHHHhCCCCCCCCEEEEECcHHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 99999776 578876 666665 89999999998 8999999999999986 9999999999998 99999987
Q ss_pred CC--------------------CHHhhccCCcEEEEccCCCC-------cccCCCcCCCeEEEEeeecCCCCCCCCCCce
Q 017438 272 TK--------------------NPEEITRQADIIISAVGQPN-------MVRGSWIKPGAVIIDVGINPVEDAKSPRGYR 324 (371)
Q Consensus 272 t~--------------------~l~~~l~~ADIVIsAvG~p~-------~v~~d~ik~gavVIDvgin~~~~~~~~~g~k 324 (371)
.. ++.+.+.++||||++++.+. .++.+++++|.+|+|+.|+|.++ +
T Consensus 175 ~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T-------~ 247 (297)
T 2egg_A 175 VEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLET-------K 247 (297)
T ss_dssp HHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSC-------H
T ss_pred HHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCC-------H
Confidence 31 23455688999999998543 25678999999999999998765 3
Q ss_pred eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 325 LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 325 l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|. ..++.+|+ +.++| ..||++|.+++|+.|+|.
T Consensus 248 ll------~~A~~~G~-~~v~G------l~MLv~Qa~~af~~w~g~ 280 (297)
T 2egg_A 248 WL------KEAKARGA-RVQNG------VGMLVYQGALAFEKWTGQ 280 (297)
T ss_dssp HH------HHHHHTTC-EEECS------HHHHHHHHHHHHHHHHSC
T ss_pred HH------HHHHHCcC-EEECC------HHHHHHHHHHHHHHHhCC
Confidence 33 33566676 44665 459999999999999985
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.3e-28 Score=231.39 Aligned_cols=218 Identities=18% Similarity=0.259 Sum_probs=179.0
Q ss_pred eCCCcchHHHHHHH-HHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017438 118 VGDRKDSATYVRNK-KKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 195 (371)
Q Consensus 118 vG~d~aS~~Yv~~k-~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 195 (371)
+| +|-++++--.. +++|+++|+++.|..|+ +++++|.+.++.+++ +++.|++||+|+|. +..++++.++| .+
T Consensus 11 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~v~~l~~-~~~~G~nVTiP~K~--~v~~~ld~ls~~A~ 84 (282)
T 3fbt_A 11 IG-EKLGHSHSSYIHKLIFEKVGIKGIYNLFE--VPKEKLKESVDTFKI-IKCGGLNVTIPYKV--EVMKELYEISEKAR 84 (282)
T ss_dssp EE-SSCCCCHHHHHHHHHHHHHTCCEEEEEEE--CCGGGHHHHHHHHHH-TTCCEEEECTTCTT--GGGGGCSEECHHHH
T ss_pred EC-CCccccchHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHhc-CCCCEEEEcCCCHH--HHHHHHHhcCHHHH
Confidence 35 46666666544 48999999999999995 777999999999987 68999999999996 66789999999 69
Q ss_pred ccCccCcch--hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 196 DVDGFHPLN--IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 196 DVDgl~~~N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
.+++++.+. -|++. |+|+|+ .|+++.|++++++++||+++|+|+|++ |++++..|.+.|+ +|+|++|+.
T Consensus 85 ~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~L~~~~~~~~~k~vlvlGaGGa-araia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 85 KIGAVNTLKFSREGIS-GFNTDY------IGFGKMLSKFRVEIKNNICVVLGSGGA-ARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp HHTCCCEEEECSSCEE-EECCHH------HHHHHHHHHTTCCCTTSEEEEECSSTT-HHHHHHHHHHTTCSEEEEEESCH
T ss_pred HcCCcceEEeeCCEEE-eeCCcH------HHHHHHHHHcCCCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCH
Confidence 999996654 36665 777776 899999999999999999999999997 9999999999998 999999874
Q ss_pred CCHHhh--------------ccCCcEEEEccCC---CC----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccch
Q 017438 273 KNPEEI--------------TRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCY 331 (371)
Q Consensus 273 ~~l~~~--------------l~~ADIVIsAvG~---p~----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~ 331 (371)
...++. + ++||||++|+. |+ .++.++++++.+|+|+.|+|.+| .|..
T Consensus 157 ~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-------~ll~---- 224 (282)
T 3fbt_A 157 EKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVET-------LFLK---- 224 (282)
T ss_dssp HHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSC-------HHHH----
T ss_pred HHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCC-------HHHH----
Confidence 222111 3 89999999963 43 36778899999999999999877 4554
Q ss_pred hhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 332 EEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 332 ~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.++..|+. +-+|.+ ||++|.+++++.|+|.
T Consensus 225 --~A~~~G~~--~~~Gl~-----MLv~Qa~~~f~lwtg~ 254 (282)
T 3fbt_A 225 --YARESGVK--AVNGLY-----MLVSQAAASEEIWNDI 254 (282)
T ss_dssp --HHHHTTCE--EECSHH-----HHHHHHHHHHHHHHTC
T ss_pred --HHHHCcCe--EeCcHH-----HHHHHHHHHHHHHcCC
Confidence 35667874 456777 9999999999999986
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-27 Score=219.99 Aligned_cols=217 Identities=18% Similarity=0.227 Sum_probs=180.9
Q ss_pred EeCCCcchHHHH-HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-c
Q 017438 117 LVGDRKDSATYV-RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E 194 (371)
Q Consensus 117 ~vG~d~aS~~Yv-~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~ 194 (371)
.+| +|.+++|- ...+++|+++|+++.|..++ ++++++.+.++.++.+ ++|++||+|+|.++ ..+++.+++ .
T Consensus 6 ~~G-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~~--~~G~~vt~P~k~~i--~~~~~~l~~~a 78 (263)
T 2d5c_A 6 VLG-HPVAHSLSPAMHAFALESLGLEGSYEAWD--TPLEALPGRLKEVRRA--FRGVNLTLPLKEAA--LAHLDWVSPEA 78 (263)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCGGGHHHHHHHHHHH--CSEEEECTTCTTGG--GGGCSEECHHH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHHHHhcccc--CceEEEcccCHHHH--HHHHHHHhHHH
Confidence 356 68888888 88999999999999999984 7889999999999986 99999999999865 677888999 9
Q ss_pred cccCccCcc--hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 195 KDVDGFHPL--NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 195 KDVDgl~~~--N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+++|++.+ +.|++. |++++. .|++..|++++++++| +++|||+|++ |++++..|.+.|++|++++++.
T Consensus 79 ~~~gavn~i~~~~g~~~-g~ntd~------~g~~~~l~~~~~~l~~-~v~iiG~G~~-g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 79 QRIGAVNTVLQVEGRLF-GFNTDA------PGFLEALKAGGIPLKG-PALVLGAGGA-GRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp HHHTCCCEEEEETTEEE-EECCHH------HHHHHHHHHTTCCCCS-CEEEECCSHH-HHHHHHHHHHTTCCEEEECSSH
T ss_pred HHhCCCCcEEccCCeEE-EeCCCH------HHHHHHHHHhCCCCCC-eEEEECCcHH-HHHHHHHHHHCCCEEEEEECCH
Confidence 999999887 778775 555554 7999999999999999 9999999995 9999999999999999999874
Q ss_pred C--------------CHHhhccCCcEEEEccCCC------CcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchh
Q 017438 273 K--------------NPEEITRQADIIISAVGQP------NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYE 332 (371)
Q Consensus 273 ~--------------~l~~~l~~ADIVIsAvG~p------~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~ 332 (371)
. ++++. +++|+||++++.. ..++.+++++|++|+|+++++.++ ++.
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t-------~l~------ 215 (263)
T 2d5c_A 150 QRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWT-------RFL------ 215 (263)
T ss_dssp HHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC-------HHH------
T ss_pred HHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCccc-------HHH------
Confidence 2 34555 8899999999864 345667899999999999986543 222
Q ss_pred hhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 333 EACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 333 ~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+..+.+++ ++++| ..||+.|.+.+++.|+|.
T Consensus 216 ~~a~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~ 246 (263)
T 2d5c_A 216 REAKAKGL-KVQTG------LPMLAWQGALAFRLWTGL 246 (263)
T ss_dssp HHHHHTTC-EEECS------HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHCcC-EEECc------HHHHHHHHHHHHHHHhCC
Confidence 33455665 46766 669999999999999985
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=225.67 Aligned_cols=221 Identities=18% Similarity=0.281 Sum_probs=179.2
Q ss_pred EeCCCcchHHHHHHH-HHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-c
Q 017438 117 LVGDRKDSATYVRNK-KKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E 194 (371)
Q Consensus 117 ~vG~d~aS~~Yv~~k-~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~ 194 (371)
.+| +|-++++--.. +.+|+++|+++.|..|+ +++++|.+.++.++. +++.|++|++|+|. +..++++.++| .
T Consensus 42 viG-~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~--v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~lD~ls~~A 115 (315)
T 3tnl_A 42 LIA-TPIRHSLSPTMHNEAFAKLGLDYVYLAFE--VGDKELKDVVQGFRA-MNLRGWNVSMPNKT--NIHKYLDKLSPAA 115 (315)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHHTCCEEEEEEE--CCHHHHHHHHHHHHH-TTCCEEEECTTSTT--TGGGGCSEECHHH
T ss_pred EEC-CCccccccHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHhc-CCCCEEEEcCCChH--HHHHHHHhcCHHH
Confidence 345 45555555444 45899999999999995 788999999999986 68999999999997 56788999999 6
Q ss_pred cccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 195 KDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 195 KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
+.+.+++.+ + -|++. |+|+|+ .|+++.|++++++++||+|+|+|+|++ |++++..|.+.|+ +|+|++|+
T Consensus 116 ~~iGAVNTi~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~l~gk~~lVlGaGG~-g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 116 ELVGAVNTVVNDDGVLT-GHITDG------TGYMRALKEAGHDIIGKKMTICGAGGA-ATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp HHHTCCSEEEEETTEEE-EECCHH------HHHHHHHHHTTCCCTTSEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECS
T ss_pred HHhCccceEEecCCEEE-EeCCCH------HHHHHHHHHcCCCccCCEEEEECCChH-HHHHHHHHHHCCCCEEEEEECC
Confidence 999998654 3 36665 666666 999999999999999999999999986 9999999999998 89999998
Q ss_pred CC-----------------------------CHHhhccCCcEEEEccC---CCC----cc-cCCCcCCCeEEEEeeecCC
Q 017438 272 TK-----------------------------NPEEITRQADIIISAVG---QPN----MV-RGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 272 t~-----------------------------~l~~~l~~ADIVIsAvG---~p~----~v-~~d~ik~gavVIDvgin~~ 314 (371)
.+ ++.+.+.++||||++|+ .|+ .+ +.++++++.+|+|+.|+|.
T Consensus 188 ~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~ 267 (315)
T 3tnl_A 188 DDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPT 267 (315)
T ss_dssp STTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSS
T ss_pred CchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCC
Confidence 21 12344678999999987 233 35 6788999999999999998
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+| +|.. .++..|+ ++-+|.+ ||++|.+++|+.|+|.+
T Consensus 268 ~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~af~lwtG~~ 304 (315)
T 3tnl_A 268 KT-------RLLE------IAEEQGC--QTLNGLG-----MMLWQGAKAFEIWTHKE 304 (315)
T ss_dssp SC-------HHHH------HHHHTTC--EEECSHH-----HHHHHHHHHHHHHHSSC
T ss_pred CC-------HHHH------HHHHCCC--eEeCcHH-----HHHHHHHHHHHHHhCCC
Confidence 77 4554 3566787 3456777 99999999999999863
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=219.62 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=180.6
Q ss_pred EEeCCCcchHHHHH-HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 116 ILVGDRKDSATYVR-NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 116 I~vG~d~aS~~Yv~-~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
-++| +|.+++|.. ..+++|+++|+++.|..|+ +++++|.+.|+.++. ++++|++||+|+|.++ ..+++.+++
T Consensus 16 ~liG-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~-~~~~G~nvtiP~k~~i--~~~ld~l~~~ 89 (275)
T 2hk9_A 16 GVIG-FPVKHSLSPVFQNALIRYAGLNAVYLAFE--INPEELKKAFEGFKA-LKVKGINVTVPFKEEI--IPLLDYVEDT 89 (275)
T ss_dssp EEEE-SSCTTCSHHHHHHHHHHHHTCSEEEEEEE--CCGGGHHHHHHHHHH-HTCCEEEECTTSTTTT--GGGCSEECHH
T ss_pred EEEC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHHh-CCCCEEEECccCHHHH--HHHHHHhhHH
Confidence 3678 999999997 5559999999999999995 788999999999995 6899999999999865 667888888
Q ss_pred ccccCccCcc--hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 194 EKDVDGFHPL--NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 194 ~KDVDgl~~~--N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|++++++.+ +.|++. |+ ++|..|++..|++++++++|++++|||+|++ |++++..|.+.|++|++++++
T Consensus 90 A~~~gavnti~~~~g~~~-g~------nTd~~G~~~~l~~~~~~~~~~~v~iiGaG~~-g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 90 AKEIGAVNTVKFENGKAY-GY------NTDWIGFLKSLKSLIPEVKEKSILVLGAGGA-SRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp HHHHTCCCEEEEETTEEE-EE------CCHHHHHHHHHHHHCTTGGGSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSS
T ss_pred HHHhCCcceEEeeCCEEE-ee------cCCHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHcCCEEEEEECC
Confidence 5999999776 456664 43 4566999999999999999999999999986 999999999999999999987
Q ss_pred CC---------------CHHhhccCCcEEEEccCCCC------cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccc
Q 017438 272 TK---------------NPEEITRQADIIISAVGQPN------MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVC 330 (371)
Q Consensus 272 t~---------------~l~~~l~~ADIVIsAvG~p~------~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd 330 (371)
.. ++.+.++++|+||++++... .++.+++++|.+|+|+++ .++ ++.
T Consensus 162 ~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~--~~t-------~ll---- 228 (275)
T 2hk9_A 162 KEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY--KET-------KLL---- 228 (275)
T ss_dssp HHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS--SCC-------HHH----
T ss_pred HHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC--ChH-------HHH----
Confidence 31 56677889999999998532 356678999999999998 333 332
Q ss_pred hhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 331 YEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 331 ~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+..+.+++ +.+|| ..||+.|.++++++|+|.
T Consensus 229 --~~a~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~ 259 (275)
T 2hk9_A 229 --KKAKEKGA-KLLDG------LPMLLWQGIEAFKIWNGC 259 (275)
T ss_dssp --HHHHHTTC-EEECS------HHHHHHHHHHHHHHHHCC
T ss_pred --HHHHHCcC-EEECC------HHHHHHHHHHHHHHHHCC
Confidence 22344565 45776 669999999999999985
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=213.66 Aligned_cols=209 Identities=16% Similarity=0.196 Sum_probs=168.4
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-ch-hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-LN-IG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~N-~G 206 (371)
.-+.+++++|+++.|..|+ +++++|.+.++.+.. .++.|++|++|+|. +...+++.++| .+-+.+++. ++ -|
T Consensus 18 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~~d~l~~~A~~iGAVNTv~~~~g 92 (277)
T 3don_A 18 MHHANFQSLNLENTYEAIN--VPVNQFQDIKKIISE-KSIDGFNVTIPHKE--RIIPYLDDINEQAKSVGAVNTVLVKDG 92 (277)
T ss_dssp HHHHHHHHTTCCCEEEEEE--CCGGGGGGHHHHHHH-TTCSEEEECTTCTT--TTGGGCSEECHHHHHHTCCCEEEEETT
T ss_pred HHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHhh-CCCCEEEECcCCHH--HHHHHhhhCCHHHHHhCceeEEEecCC
Confidence 3468899999999999996 677788888888876 47999999999997 44678888888 777777743 33 45
Q ss_pred hhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC------------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK------------ 273 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~------------ 273 (371)
++. |+|+|+ .|+++.|++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+..
T Consensus 93 ~l~-G~NTD~------~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~ 164 (277)
T 3don_A 93 KWI-GYNTDG------IGYVNGLKQIYEGIEDAYILILGAGGA-SKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164 (277)
T ss_dssp EEE-EECCHH------HHHHHHHHHHSTTGGGCCEEEECCSHH-HHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEE
T ss_pred EEE-EECChH------HHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccc
Confidence 565 776766 899999999999999999999999996 9999999999998 8999998742
Q ss_pred ---CHHhhccCCcEEEEccCC---CC---cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccC
Q 017438 274 ---NPEEITRQADIIISAVGQ---PN---MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPV 344 (371)
Q Consensus 274 ---~l~~~l~~ADIVIsAvG~---p~---~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPV 344 (371)
++.+.+.++||||++|+. |+ .++.++++++.+|+|+.|+|.++ +|. ..++..|+ ++
T Consensus 165 ~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T-------~ll------~~A~~~G~--~~ 229 (277)
T 3don_A 165 NLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKT-------PIL------IEAEQRGN--PI 229 (277)
T ss_dssp CHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSC-------HHH------HHHHHTTC--CE
T ss_pred cHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCC-------HHH------HHHHHCcC--EE
Confidence 234557899999999874 32 25778999999999999998765 333 23566776 34
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 345 PGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 345 PGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
-+|.+ ||++|.+++++.|+|..
T Consensus 230 ~~Gl~-----MLv~Qa~~~f~lwtg~~ 251 (277)
T 3don_A 230 YNGLD-----MFVHQGAESFKIWTNLE 251 (277)
T ss_dssp ECTHH-----HHHHHHHHHHHHHHSSC
T ss_pred eCCHH-----HHHHHHHHHHHHHcCCC
Confidence 56777 99999999999999863
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-25 Score=211.05 Aligned_cols=211 Identities=14% Similarity=0.157 Sum_probs=170.8
Q ss_pred HHHHHHHHcCCeEEEEeCCC---CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-ch
Q 017438 130 NKKKACQSVGINSFEVHLPE---DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-LN 204 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~---~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~N 204 (371)
.-+.+++++|+++.|..|+- +++.++|.+.++.+.. +++.|++|++|+|. +..++++.++| .+-+.+++. ++
T Consensus 22 ~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~lD~l~~~A~~iGAVNTv~~ 98 (283)
T 3jyo_A 22 MHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPYKQ--AVLPLLDEVSEQATQLGAVNTVVI 98 (283)
T ss_dssp HHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHH-TTCCEEEECTTCTT--TTGGGSSEECHHHHHHTCCCEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhh-CCCCEEEECcccHH--HHHHHhhhCCHHHHHhCcceEEEE
Confidence 44678999999999999842 3566788888888875 58999999999997 44678888888 788877743 33
Q ss_pred --hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC--------
Q 017438 205 --IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK-------- 273 (371)
Q Consensus 205 --~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~-------- 273 (371)
-|++. |+|+|+ .|+++.|++.+.+++||+++|+|+|++ |++++..|...|+ +|++++|+..
T Consensus 99 ~~~g~l~-G~NTD~------~G~~~~l~~~~~~l~~k~vlVlGaGG~-g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~ 170 (283)
T 3jyo_A 99 DATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDTSRAQALADV 170 (283)
T ss_dssp CTTSCEE-EECHHH------HHHHHHHHHHCTTCCCSEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH
T ss_pred CCCCeEE-EecCCH------HHHHHHHHHhCcCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 35554 777776 899999999999999999999999996 9999999999998 7999988621
Q ss_pred ----------------CHHhhccCCcEEEEccCC---CC---cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccch
Q 017438 274 ----------------NPEEITRQADIIISAVGQ---PN---MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCY 331 (371)
Q Consensus 274 ----------------~l~~~l~~ADIVIsAvG~---p~---~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~ 331 (371)
++.+.++++|+||++|+. |+ .++.++++++.+|+|+.|+|.+| .|..
T Consensus 171 ~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-------~ll~---- 239 (283)
T 3jyo_A 171 INNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET-------ELLK---- 239 (283)
T ss_dssp HHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSC-------HHHH----
T ss_pred HHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCC-------HHHH----
Confidence 455667789999999973 32 36788999999999999999877 4544
Q ss_pred hhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 332 EEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 332 ~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
.++..|+ ++-+|.+ ||++|.+++++.|+|.+
T Consensus 240 --~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~~ 270 (283)
T 3jyo_A 240 --AARALGC--ETLDGTR-----MAIHQAVDAFRLFTGLE 270 (283)
T ss_dssp --HHHHHTC--CEECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred --HHHHCcC--eEeCcHH-----HHHHHHHHHHHHHcCCC
Confidence 3556677 4556777 99999999999999863
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-25 Score=211.23 Aligned_cols=210 Identities=11% Similarity=0.106 Sum_probs=167.1
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc--h-h
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL--N-I 205 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~--N-~ 205 (371)
.-+.+++++|+++.|..|+ ++.++|.+.++.+.. +++.|++|++|++. +...+++.++| .+-+.+++.+ + -
T Consensus 26 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~ld~l~~~A~~iGAVNTv~~~~~ 100 (281)
T 3o8q_A 26 IHTLFARQTQQSMIYTAQC--VPVDGFTEAAKHFFA-QGGRGCNVTVPFKE--EAYRFADRLTERARLAGAVNTLKKLDD 100 (281)
T ss_dssp HHHHHHHHTTCCEEEEEEC--CCTTCHHHHHHHHHH-TTCCEEEECTTSHH--HHHHHCSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHh-CCCCEEEECCccHH--HHHHHHhhcCHHHHhhCeeeEEEEcCC
Confidence 4468899999999999996 666788889988875 58999999999986 55667777888 7777777433 2 3
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCCH---------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKNP--------- 275 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~l--------- 275 (371)
|++. |+|+|+ .|+++.|++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+....
T Consensus 101 g~l~-G~NTD~------~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~ 172 (281)
T 3o8q_A 101 GEIL-GDNTDG------EGLVQDLLAQQVLLKGATILLIGAGGA-ARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA 172 (281)
T ss_dssp SCEE-EECCHH------HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred CcEE-EEecHH------HHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence 5565 676776 899999999999999999999999986 9999999999996 999999974321
Q ss_pred ---------HhhccCCcEEEEccCCC-----CcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhccee
Q 017438 276 ---------EEITRQADIIISAVGQP-----NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAI 341 (371)
Q Consensus 276 ---------~~~l~~ADIVIsAvG~p-----~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~i 341 (371)
.+...++||||++|+.. ..++.++++++.+|+|+.|+|.+| +|.. . ++..|+.
T Consensus 173 ~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T-------~ll~-----~-A~~~G~~ 239 (281)
T 3o8q_A 173 YGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYT-------VFNQ-----W-ARQHGCA 239 (281)
T ss_dssp GSCEEEEEGGGCCSCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCC-------HHHH-----H-HHHTTCS
T ss_pred cCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccC-------HHHH-----H-HHHCCCC
Confidence 12226899999999853 136778999999999999999776 4443 2 4556752
Q ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 342 TPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 342 TPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
.+-+|.+ ||++|.+++|+.|+|.+
T Consensus 240 -~~~~Gl~-----Mlv~Qa~~~f~lwtg~~ 263 (281)
T 3o8q_A 240 -QAIDGLG-----MLVGQAAESFMLWRGLR 263 (281)
T ss_dssp -EEECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred -EEECcHH-----HHHHHHHHHHHHHhCCC
Confidence 1445677 99999999999999863
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-25 Score=210.88 Aligned_cols=210 Identities=11% Similarity=0.114 Sum_probs=165.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-ch-hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-LN-IG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~N-~G 206 (371)
.-+.+++++|+++.|..|+ +..++|.+.++.+.. +++.|++|++|++. +...+++.++| .+-+.+++. .+ -|
T Consensus 20 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~~d~l~~~A~~iGAvNTv~~~~g 94 (272)
T 3pwz_A 20 IHGLFAQASNQQLEYGAIE--GSLDDFEAQVLQFRS-EGGKGMNITAPFKL--RAFELADRRSERAQLARAANALKFEDG 94 (272)
T ss_dssp HHHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTCHH--HHHHHCSEECHHHHHHTCCSEEEEETT
T ss_pred HHHHHHHHcCCCcEEEEEE--cCHHHHHHHHHHHhh-CCCCEEEECchhHH--HHHHHHhhCCHHHHHhCccceEEccCC
Confidence 4567899999999999986 566788889988875 58999999999986 55677777888 777777643 33 35
Q ss_pred hhccCCCccccccCCHHHHHHH-HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCCHH--------
Q 017438 207 RLAMRGREPLFIPCTPKGCIEL-LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKNPE-------- 276 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~l-L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~l~-------- 276 (371)
++. |+|+|+ .|+++. |++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+....+
T Consensus 95 ~l~-G~NTD~------~G~~~~lL~~~~~~l~~k~~lvlGaGg~-~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~ 166 (272)
T 3pwz_A 95 RIV-AENFDG------IGLLRDIEENLGEPLRNRRVLLLGAGGA-VRGALLPFLQAGPSELVIANRDMAKALALRNELDH 166 (272)
T ss_dssp EEE-EECCHH------HHHHHHHHTTSCCCCTTSEEEEECCSHH-HHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC
T ss_pred eEE-EecCCH------HHHHHHHHHHcCCCccCCEEEEECccHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc
Confidence 554 666766 899996 998999999999999999996 9999999999996 9999998742211
Q ss_pred ---------hhc-cCCcEEEEccCCC---C--cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhccee
Q 017438 277 ---------EIT-RQADIIISAVGQP---N--MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAI 341 (371)
Q Consensus 277 ---------~~l-~~ADIVIsAvG~p---~--~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~i 341 (371)
+.- .++|+||++|+.. + .++.++++++.+|+|+.|+|.+| +|.. .++.+|+.
T Consensus 167 ~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T-------~ll~------~A~~~G~~ 233 (272)
T 3pwz_A 167 SRLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLT-------PFLR------LAREQGQA 233 (272)
T ss_dssp TTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSC-------HHHH------HHHHHSCC
T ss_pred CCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCC-------HHHH------HHHHCCCC
Confidence 111 6899999999742 1 36788999999999999999876 3443 35566753
Q ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 342 TPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 342 TPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
.+-+|.+ ||++|.+++++.|+|..
T Consensus 234 -~~~~Gl~-----ML~~Qa~~~f~lwtg~~ 257 (272)
T 3pwz_A 234 -RLADGVG-----MLVEQAAEAFAWWRGVR 257 (272)
T ss_dssp -EEECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred -EEECCHH-----HHHHHHHHHHHHHhCCC
Confidence 1456777 99999999999999863
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=211.35 Aligned_cols=209 Identities=18% Similarity=0.237 Sum_probs=167.4
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-ch-hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-LN-IG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~N-~G 206 (371)
.-+.+++++|+++.|..|+ +++++|.+.++.+.. .++.|++|++|+|. +..++++.++| .+-+.+++. ++ -|
T Consensus 49 ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~lD~ls~~A~~iGAVNTi~~~~g 123 (312)
T 3t4e_A 49 MQNKALEKAGLPYTYMAFE--VDNTTFASAIEGLKA-LKMRGTGVSMPNKQ--LACEYVDELTPAAKLVGAINTIVNDDG 123 (312)
T ss_dssp HHHHHHHHHTCSEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTSHH--HHGGGCSEECHHHHHHTCCSEEEEETT
T ss_pred HHHHHHHHcCCCcEEEeEe--cCHHHHHHHHHHHhh-CCCCEEEECchhHH--HHHHHhhhcCHHHHHhCceeEEEecCC
Confidence 5578899999999999996 667788888888876 47999999999986 44566777777 777777643 33 45
Q ss_pred hhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC------------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK------------ 273 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~------------ 273 (371)
++. |+|+|+ .|+++.|++.+++++||+++|+|+|++ |++++..|.+.|+ +|+|++|+.+
T Consensus 124 ~l~-G~NTD~------~Gf~~~L~~~~~~l~gk~~lVlGAGGa-araia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~ 195 (312)
T 3t4e_A 124 YLR-GYNTDG------TGHIRAIKESGFDMRGKTMVLLGAGGA-ATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRV 195 (312)
T ss_dssp EEE-EECHHH------HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHH
T ss_pred EEE-EeCCcH------HHHHHHHHhcCCCcCCCEEEEECcCHH-HHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHh
Confidence 665 777776 899999999999999999999999997 9999999999998 8999999821
Q ss_pred --------------CH---HhhccCCcEEEEccCC---CC---cc--cCCCcCCCeEEEEeeecCCCCCCCCCCceeecc
Q 017438 274 --------------NP---EEITRQADIIISAVGQ---PN---MV--RGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGD 328 (371)
Q Consensus 274 --------------~l---~~~l~~ADIVIsAvG~---p~---~v--~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GD 328 (371)
++ .+.+.++||||++|+. |. .+ +.++++++.+|+|+.|+|.+| +|..
T Consensus 196 ~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------~ll~- 267 (312)
T 3t4e_A 196 NENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMT-------KLLQ- 267 (312)
T ss_dssp HHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSC-------HHHH-
T ss_pred hhccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCC-------HHHH-
Confidence 21 3346689999999873 21 12 567899999999999999887 4554
Q ss_pred cchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 329 VCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 329 Vd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
.++..|+ ++-+|.+ ||++|.+++++.|+|..
T Consensus 268 -----~A~~~G~--~~~~Gl~-----MLv~Qa~~af~lwtg~~ 298 (312)
T 3t4e_A 268 -----QAQQAGC--KTIDGYG-----MLLWQGAEQFELWTGKA 298 (312)
T ss_dssp -----HHHHTTC--EEECHHH-----HHHHHHHHHHHHHHSSC
T ss_pred -----HHHHCCC--eEECcHH-----HHHHHHHHHHHHHhCCC
Confidence 3566787 3456777 99999999999999863
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.1e-23 Score=196.24 Aligned_cols=202 Identities=14% Similarity=0.147 Sum_probs=154.7
Q ss_pred HHHHHH----HHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-c
Q 017438 130 NKKKAC----QSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-L 203 (371)
Q Consensus 130 ~k~k~~----~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~ 203 (371)
.-+.++ +++|+++.|..|+ + +++.+.++.+.. +++.|++|++|+|. +..++++.++| .+-+.+++. +
T Consensus 21 ~hn~~f~~~~~~~gl~~~Y~~~~--v--~~l~~~~~~~~~-~~~~G~nVTiP~K~--~v~~~~d~l~~~A~~iGAVNTi~ 93 (269)
T 3phh_A 21 IHNACFLTFQKELRFLGHYHPIL--L--PLESHIKSEFLH-LGLSGANVTLPFKE--RAFQVCDKIKGIALECGAVNTLV 93 (269)
T ss_dssp HHHHHHHHHHHHHSSEEEEEEEE--C--CSSSCHHHHHHH-TTEEEEEECTTCHH--HHHHHSSEECGGGGGTTCCCEEE
T ss_pred HHHHHHHHHHHHcCCCCEEeeEE--h--hhHHHHHHHHhh-CCCCEEEEccccHH--HHHHHHhhcCHHHHHhCceeEEE
Confidence 345677 9999999999986 3 455556666655 67999999999986 55677788888 777776643 2
Q ss_pred h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhh----
Q 017438 204 N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI---- 278 (371)
Q Consensus 204 N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~---- 278 (371)
+ -|++. |+|+|+ .|+++.|++.+ ||+++|||+|++ |++++..|.+.|++|+|++|+....++.
T Consensus 94 ~~~g~l~-G~NTD~------~Gf~~~L~~~~----~k~vlvlGaGGa-araia~~L~~~G~~v~V~nRt~~ka~~la~~~ 161 (269)
T 3phh_A 94 LENDELV-GYNTDA------LGFYLSLKQKN----YQNALILGAGGS-AKALACELKKQGLQVSVLNRSSRGLDFFQRLG 161 (269)
T ss_dssp EETTEEE-EECCHH------HHHHHHCC-------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCTTHHHHHHHT
T ss_pred eeCCEEE-EecChH------HHHHHHHHHcC----CCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC
Confidence 3 45555 666766 89999998754 999999999997 9999999999999999999987654432
Q ss_pred --------ccCCcEEEEccCC---CC-cccCC----CcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceec
Q 017438 279 --------TRQADIIISAVGQ---PN-MVRGS----WIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAIT 342 (371)
Q Consensus 279 --------l~~ADIVIsAvG~---p~-~v~~d----~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iT 342 (371)
+.++|+||++|+. ++ .++.+ .++++.+|+|+.|+| ++ +|.. .++..|+
T Consensus 162 ~~~~~~~~l~~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P-~T-------~ll~------~A~~~G~-- 225 (269)
T 3phh_A 162 CDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF-LT-------PFLS------LAKELKT-- 225 (269)
T ss_dssp CEEESSCCSSCCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS-CC-------HHHH------HHHHTTC--
T ss_pred CeEecHHHhccCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC-ch-------HHHH------HHHHCcC--
Confidence 2479999999874 22 35666 678899999999999 77 3332 3566776
Q ss_pred cCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 343 PVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 343 PVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
++-+|.+ ||++|.+++++.|+|.+
T Consensus 226 ~~~~Gl~-----MLv~Qa~~~f~lw~g~~ 249 (269)
T 3phh_A 226 PFQDGKD-----MLIYQAALSFEKFSASQ 249 (269)
T ss_dssp CEECSHH-----HHHHHHHHHHHHHTTTS
T ss_pred EEECCHH-----HHHHHHHHHHHHHhCCC
Confidence 4556777 99999999999999863
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-22 Score=190.12 Aligned_cols=221 Identities=15% Similarity=0.236 Sum_probs=167.5
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhC
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAV 191 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I 191 (371)
+|..-.+|+. .|.+=. .-+.+++++|+++.|..|+ +++|.+.++.+.. .++.|++|++|++.. ...+++.+
T Consensus 7 ~~~~~viG~P-hS~SP~-~hn~~~~~~gl~~~Y~~~~----~~~l~~~~~~~~~-~~~~G~nVTiP~K~~--i~~~~d~~ 77 (271)
T 1npy_A 7 QLCMSLSGRP-SNFGTT-FHNYLYDKLGLNFIYKAFT----TQDIEHAIKGVRA-LGIRGCAVSMPFKET--CMPFLDEI 77 (271)
T ss_dssp EEEEEECSSC-CSHHHH-HHHHHHHHHTCCEEEEEEC----CSCHHHHHHHHHH-HTCCEEEECTTCTTT--TGGGCSEE
T ss_pred eEEEEEECCC-CcccHH-HHHHHHHHcCCCcEEEeec----hhhHHHHHHHhcc-CCCCeEEECcCCHHH--HHHHHHHh
Confidence 3423467876 666655 5588999999999999997 3456666666654 368999999999984 46678888
Q ss_pred Cc-ccccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEE
Q 017438 192 SM-EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSI 267 (371)
Q Consensus 192 ~p-~KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv 267 (371)
++ .+.+.+++.+ | .|++. |+++++ .|+++.|++.+++ .+|+++|||+|++ |++++..|...|+ +|+|
T Consensus 78 ~~~A~~iGAvNTi~~~~g~l~-g~NTD~------~G~~~~l~~~~~~-~~~~vlvlGaGga-arav~~~L~~~G~~~i~v 148 (271)
T 1npy_A 78 HPSAQAIESVNTIVNDNGFLR-AYNTDY------IAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKI 148 (271)
T ss_dssp CHHHHTTTCCCEEEEETTEEE-EECHHH------HHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEE
T ss_pred hHHHHHhCCCCceECcCCEEE-eecCCH------HHHHHHHHHhCCC-CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEE
Confidence 88 8888777443 4 46665 666666 8999999988775 7899999999997 9999999999997 7999
Q ss_pred EeCCCCC---HHh----------hccCCcEEEEccCCCC--------c-ccCCCcCCCeEEEEeeecCCCCCCCCCCcee
Q 017438 268 VHSRTKN---PEE----------ITRQADIIISAVGQPN--------M-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRL 325 (371)
Q Consensus 268 ~h~~t~~---l~~----------~l~~ADIVIsAvG~p~--------~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl 325 (371)
++|+... +.+ .+.++|+||++|+... . ++.++++++.+|+|+.|+|.++ .|
T Consensus 149 ~nRt~~ka~~la~~~~~~~~~~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T-------~l 221 (271)
T 1npy_A 149 YARNVKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVET-------PF 221 (271)
T ss_dssp ECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSC-------HH
T ss_pred EeCCHHHHHHHHHHcCCccchhhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCC-------HH
Confidence 9997421 110 1367999999998532 1 3446778899999999998766 34
Q ss_pred ecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 326 VGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 326 ~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.. .++..|+. +-+|.+ ||++|.+++++.|+|.
T Consensus 222 l~------~A~~~G~~--~i~Gl~-----MLv~Qa~~~f~lw~g~ 253 (271)
T 1npy_A 222 IR------YAQARGKQ--TISGAA-----VIVLQAVEQFELYTHQ 253 (271)
T ss_dssp HH------HHHHTTCE--EECHHH-----HHHHHHHHHHHHHHSC
T ss_pred HH------HHHHCCCE--EECCHH-----HHHHHHHHHHHHHhCC
Confidence 33 35667764 455676 9999999999999985
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-21 Score=186.21 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=156.5
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCc-chhhh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHP-LNIGR 207 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~-~N~G~ 207 (371)
.-+.+++++|+++.|..|+ +++++|.+.++.+. +++.|++|++|+|. +..++++. +| .+-+.+++. ++.
T Consensus 18 ~hn~~~~~~gl~~~Y~~~~--v~~~~l~~~~~~~~--~~~~G~nVT~P~K~--~v~~~~d~-~~~A~~iGAvNTi~~~-- 88 (253)
T 3u62_A 18 LYNEYFKRAGMNHSYGMEE--IPPESFDTEIRRIL--EEYDGFNATIPHKE--RVMRYVEP-SEDAQRIKAVNCVFRG-- 88 (253)
T ss_dssp HHHHHHHHHTCCCEEEEEE--CCGGGHHHHHHHHH--HHCSEEEECTTCTT--GGGGGSEE-CHHHHHHTCCCEEETT--
T ss_pred HHHHHHHHcCCCCEEEeEe--cCHHHHHHHHHHHh--hCCCceeecCChHH--HHHHHhCC-CHHHHHcCcceEeecC--
Confidence 4467899999999999996 67788999999988 68999999999997 44667777 77 677666643 232
Q ss_pred hccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------
Q 017438 208 LAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------- 272 (371)
Q Consensus 208 l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------- 272 (371)
.|+|+|+ .|+++.|++. +++| +++|||+|++ |++++..|.+.|+ +|++++|+.
T Consensus 89 --~G~NTD~------~G~~~~l~~~--~~~~-~vliiGaGg~-a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~ 156 (253)
T 3u62_A 89 --KGYNTDW------VGVVKSLEGV--EVKE-PVVVVGAGGA-ARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFS 156 (253)
T ss_dssp --EEECCHH------HHHHHHTTTC--CCCS-SEEEECCSHH-HHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEE
T ss_pred --EEEcchH------HHHHHHHHhc--CCCC-eEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCC
Confidence 4777777 8999999876 5789 9999999997 9999999999998 899999873
Q ss_pred -CCHHhhccCCcEEEEccC---CCC--cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC
Q 017438 273 -KNPEEITRQADIIISAVG---QPN--MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG 346 (371)
Q Consensus 273 -~~l~~~l~~ADIVIsAvG---~p~--~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG 346 (371)
.++.+.++++|+||++|+ +|+ .++.++++++.+|+|+.|+ ++ .+.- . ++..|+-.-+||
T Consensus 157 ~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~--~T-------~ll~-----~-A~~~G~~~~~~G 221 (253)
T 3u62_A 157 LDQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF--DT-------PLVV-----K-ARKLGVKHIIKG 221 (253)
T ss_dssp GGGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS--CC-------HHHH-----H-HHHHTCSEEECT
T ss_pred HHHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC--Cc-------HHHH-----H-HHHCCCcEEECC
Confidence 234466789999999986 343 3566789999999999998 44 3332 2 344565202554
Q ss_pred CccHHHHHHHHHHHHHHHHHHhcC
Q 017438 347 GVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 347 GVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.+ ||+.|.+.+++.|+|.
T Consensus 222 -l~-----MLv~Qa~~af~~wtg~ 239 (253)
T 3u62_A 222 -NL-----MFYYQAMENLKIWGIY 239 (253)
T ss_dssp -HH-----HHHHHHHHHHHHTTCC
T ss_pred -HH-----HHHHHHHHHHHHHhCC
Confidence 44 9999999999999985
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.1e-16 Score=159.17 Aligned_cols=206 Identities=18% Similarity=0.254 Sum_probs=145.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-h---
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N--- 204 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~-N--- 204 (371)
.-+.+++++|+++.|..|+- +++.+.++.+.. +++.|++|++|++. +...+++.+++ .+.+.+++.+ |
T Consensus 252 ~hn~~f~~~gl~~~Y~~~~~----~~l~~~~~~~~~-~~~~G~nVTiP~K~--~i~~~ld~~~~~A~~iGAvNti~~~~~ 324 (523)
T 2o7s_A 252 VHNQAFKSVDFNGVYVHLLV----DNLVSFLQAYSS-SDFAGFSCTIPHKE--AALQCCDEVDPLAKSIGAVNTILRRKS 324 (523)
T ss_dssp HHHHHHHHTTCSEEEEEEEC----SCHHHHHHHTCS-TTEEEEEECTTCHH--HHHHHCSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHHcCCCcEEEeEEc----chHHHHHHHHhc-CCCCEEEECCCCHH--HHHHHhcccCHHHHHhCCCeEEEEecC
Confidence 45789999999999999863 267777877765 57999999999985 44566777777 7888777443 3
Q ss_pred hhhhccCCCccccccCCHHHHHHHHHHh-------------CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 205 IGRLAMRGREPLFIPCTPKGCIELLHRY-------------GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 205 ~G~l~~g~~~~~~~PcTa~gvi~lL~~~-------------~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|++. |+++++ .|++..|+.. ..+++||+++|+|+|++ |+.++..|.++|++|++++|+
T Consensus 325 ~gk~~-g~nTD~------~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGi-g~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 325 DGKLL-GYNTDC------IGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGA-GKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp TCCEE-EECCHH------HHHHHHHHHHC-------------------CEEEECCSHH-HHHHHHHHHHHCC-CEEEESS
T ss_pred CCeEE-EEcCCH------HHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECC
Confidence 35554 555655 7888888765 13688999999999986 999999999999999999986
Q ss_pred CCC-----------------HHh-hccCCcEEEEccCC---C----CcccCCCcCCCeEEEEeeecCCCCCCCCCCceee
Q 017438 272 TKN-----------------PEE-ITRQADIIISAVGQ---P----NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLV 326 (371)
Q Consensus 272 t~~-----------------l~~-~l~~ADIVIsAvG~---p----~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~ 326 (371)
... +++ .....|+||+++|. | ..+...++++...++|+-+++.++ +++
T Consensus 397 ~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T-------~ll 469 (523)
T 2o7s_A 397 YERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRIT-------RLL 469 (523)
T ss_dssp HHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSC-------HHH
T ss_pred HHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccC-------HHH
Confidence 321 111 12347999999984 2 124445667778999999887654 233
Q ss_pred cccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 327 GDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 327 GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
- . ++..|+. +-+|.+ ||++|.+.+++.|+|.
T Consensus 470 ~-----~-a~~~G~~--~i~Gl~-----mlv~Qa~~~f~lwtg~ 500 (523)
T 2o7s_A 470 R-----E-AEESGAI--TVSGSE-----MFVRQAYEQFEIFTGL 500 (523)
T ss_dssp H-----H-HHTTTCE--EECHHH-----HHHHHHHHHHHHHHSS
T ss_pred H-----H-HHHCCCE--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 2 2 3345664 345565 9999999999999985
|
| >2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=139.48 Aligned_cols=165 Identities=19% Similarity=0.367 Sum_probs=128.1
Q ss_pred HHHHHHHHHc-CCeEEEEeCCCCC-CHHHHHHHHHHhcCCCCccEEEE---eCCCCCCCCHHHHHhhCCcccccCccCcc
Q 017438 129 RNKKKACQSV-GINSFEVHLPEDT-SEQEVLKHISVFNDDPSVHGILV---QLPLPCHIDEQSILNAVSMEKDVDGFHPL 203 (371)
Q Consensus 129 ~~k~k~~~~~-GI~~~~~~lp~~v-~~~el~~~I~~LN~D~~V~GIlV---qlPLp~~i~~~~i~~~I~p~KDVDgl~~~ 203 (371)
.+|...++++ ||++.|+.|+ + +.++|.+.++.+. +++.|++| +.|++. ++++.++. -|+ +++
T Consensus 91 h~ka~lf~~~gGid~~yi~ld--v~d~de~~~~v~~l~--~~f~GinvED~T~P~k~-----~il~~l~~--avN--t~v 157 (439)
T 2dvm_A 91 EGKALLFKRFGGVDAFPIMIK--EQEPNKFIDIVKAIA--PTFGGINLEDIASPKCF-----YILERLRE--ELD--IPV 157 (439)
T ss_dssp HHHHHHHHHHHCCEEEEEECS--CCSHHHHHHHHHHTG--GGCSEEEECSCCTTHHH-----HHHHHHHH--HCS--SCE
T ss_pred HHHHHHHHHhCCCCCeeeeee--cCCHHHHHHHHHHhC--ccCcEEEEEeCCCchHH-----HHHHHHHH--hcC--EEE
Confidence 3455569999 8999999996 5 7889999999997 68999999 999874 56666643 111 222
Q ss_pred h--hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEe----CC---
Q 017438 204 N--IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVH----SR--- 271 (371)
Q Consensus 204 N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h----~~--- 271 (371)
+ -|+.. | ..+..|++..|+..+.++++++|+|+|+|++ |+.++.+|...|+ +|++++ |+
T Consensus 158 f~dD~~gt-g-------ntd~aG~~~AL~~~g~~l~~~rvlvlGAGgA-g~aia~~L~~~G~~~~~I~vvd~~~~R~G~~ 228 (439)
T 2dvm_A 158 FHDDQQGT-A-------AVVLAGLLNALKVVGKKISEITLALFGAGAA-GFATLRILTEAGVKPENVRVVELVNGKPRIL 228 (439)
T ss_dssp EEHHHHHH-H-------HHHHHHHHHHHHHHTCCTTTCCEEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEETTEEEEC
T ss_pred EeCCCcEE-e-------ehHHHHHHHHHHHhCCCccCCEEEEECccHH-HHHHHHHHHHcCCCcCeEEEEEccCCCcCcc
Confidence 1 22222 2 3334899999999999999999999999997 9999999999998 799999 65
Q ss_pred -C-CC-----------------------HHhhccCCcEEEEccCCC-CcccCCC---cCCCeEEEEeeecCCCC
Q 017438 272 -T-KN-----------------------PEEITRQADIIISAVGQP-NMVRGSW---IKPGAVIIDVGINPVED 316 (371)
Q Consensus 272 -t-~~-----------------------l~~~l~~ADIVIsAvG~p-~~v~~d~---ik~gavVIDvgin~~~~ 316 (371)
. .+ +.+.++++|+||++++.| +++++++ ++++.+|+|+ +||.++
T Consensus 229 ~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDL-ynP~~t 301 (439)
T 2dvm_A 229 TSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPL-ANPVPE 301 (439)
T ss_dssp CTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEEC-CSSSCS
T ss_pred ccccchhHHHHHHHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEEC-CCCCCc
Confidence 1 12 345567899999999985 7776544 5678999999 999865
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-12 Score=121.69 Aligned_cols=212 Identities=16% Similarity=0.061 Sum_probs=142.2
Q ss_pred HHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCcc
Q 017438 136 QSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREP 215 (371)
Q Consensus 136 ~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~ 215 (371)
-+.|++..|..++ ++.++|.+.++.+--.....|++++.|+....+...+.+.++..+ .--+.++|.-.+. . ..
T Consensus 23 ~~~g~~~~y~~~~--v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~-~~~~gavnt~~~~-~--~~ 96 (287)
T 1lu9_A 23 YDGGADHITGYGN--VTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVK-KRFFGPFRVSCML-D--SN 96 (287)
T ss_dssp HHTTCSEEEEESS--CCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHH-HHCBTTBCCEEEE-C--ST
T ss_pred eccCcceEeccCC--cCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHH-HhcCCCeEEEEec-C--CC
Confidence 3799999999884 788899999999744456889999999766566665555544322 1112445543221 1 11
Q ss_pred ccccCCHHHHHHHHHHh-CCCCCCCEEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC--------------------
Q 017438 216 LFIPCTPKGCIELLHRY-GFDIKGKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK-------------------- 273 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~~~-~i~l~GK~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------- 273 (371)
+ .+++..|+++.|++. +.+++||+++|+| +|+ +|+.++..|+++|++|++++|+..
T Consensus 97 G-~nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGG-iG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~ 174 (287)
T 1lu9_A 97 G-SNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGP-VGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 174 (287)
T ss_dssp T-HHHHHHHHHHHHHHHTTSCCTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEE
T ss_pred c-CCchHHHHHHHHHHhhccCCCCCEEEEECCCcH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEe
Confidence 2 245669999999998 8899999999999 666 599999999999999999987621
Q ss_pred C------HHhhccCCcEEEEccCCC--C-cc-cCCCcCCCeEEEEeeecCCC----CCCCCCCceeecccchhhhhhhcc
Q 017438 274 N------PEEITRQADIIISAVGQP--N-MV-RGSWIKPGAVIIDVGINPVE----DAKSPRGYRLVGDVCYEEACEVAS 339 (371)
Q Consensus 274 ~------l~~~l~~ADIVIsAvG~p--~-~v-~~d~ik~gavVIDvgin~~~----~~~~~~g~kl~GDVd~~~v~~~a~ 339 (371)
| +++.+.++|+||+++|.. . .+ +.+.+++...++|+-+.+.. + .+....-.-...+..|
T Consensus 175 D~~~~~~~~~~~~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~i~~t-------~ll~~a~~~~~~~~~G 247 (287)
T 1lu9_A 175 ETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGI-------DATDKGKEYGGKRAFG 247 (287)
T ss_dssp ECCSHHHHHHHTTTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCSBTTS-------CTTCEEEEETTEEEEC
T ss_pred cCCCHHHHHHHHHhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhHHhhcc-------hHHhhccccCCCcccc
Confidence 1 234567789999999742 1 12 33446778899999887754 3 1221000000002334
Q ss_pred eeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 340 AITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 340 ~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+. +-+|.+ ||++|...+ +.|++.
T Consensus 248 ~~--~v~gl~-----ml~~qa~~a-~~~~~~ 270 (287)
T 1lu9_A 248 AL--GIGGLK-----LKLHRACIA-KLFESS 270 (287)
T ss_dssp HH--HHHHHH-----HHHHHHHHH-HHTSCS
T ss_pred ce--eECchH-----HHHHHHHHH-HHhhCC
Confidence 32 344555 999999888 778764
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.09 E-value=4e-10 Score=107.83 Aligned_cols=120 Identities=23% Similarity=0.378 Sum_probs=94.2
Q ss_pred HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC
Q 017438 230 HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 230 ~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+..+.++.||++.|||.|.+ |+.++..|...|++|++++++. .++.+.++++|+||++++. +
T Consensus 149 ~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~ 226 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRT-GMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-M 226 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-C
T ss_pred HhcCCCCCCCEEEEEcccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-h
Confidence 44578999999999999886 9999999999999999998762 2456778999999999986 5
Q ss_pred cccC---CCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhccee---cc-CCCCccHHHHHHHHHHHHHHHH
Q 017438 294 MVRG---SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAI---TP-VPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 294 ~v~~---d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~i---TP-VPGGVGp~T~amLl~n~v~a~~ 365 (371)
+++. +.+|+|+++||++..+. +++++. .+..+.. .| +||+++|.+.+.|+.|.+..+-
T Consensus 227 ~i~~~~~~~mk~g~~lin~a~g~~-------------~~~~~~-a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~~l 291 (300)
T 2rir_A 227 ILNQTVLSSMTPKTLILDLASRPG-------------GTDFKY-AEKQGIKALLAPGLPGIVAPKTAGQILANVLSKLL 291 (300)
T ss_dssp CBCHHHHTTSCTTCEEEECSSTTC-------------SBCHHH-HHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHhCCCCCEEEEEeCCCC-------------CcCHHH-HHHCCCEEEECCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 6644 45799999999997543 233433 3333432 26 8899999999999999887654
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=93.02 Aligned_cols=92 Identities=18% Similarity=0.390 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------CCHHhhccCC
Q 017438 220 CTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------KNPEEITRQA 282 (371)
Q Consensus 220 cTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------~~l~~~l~~A 282 (371)
+.+...++.++... |++++|||.|.+ |+.++..|...|++|++++++. .++++.++++
T Consensus 7 sv~~~a~~~~~~~~----~~~v~iiG~G~i-G~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 81 (144)
T 3oj0_A 7 SIPSIVYDIVRKNG----GNKILLVGNGML-ASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNN 81 (144)
T ss_dssp SHHHHHHHHHHHHC----CCEEEEECCSHH-HHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTC
T ss_pred cHHHHHHHHHHhcc----CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCC
Confidence 45566778887764 999999999885 9999999999999999998752 3566778899
Q ss_pred cEEEEccCCCCc-ccCCCcCCCeEEEEeeecCCCC
Q 017438 283 DIIISAVGQPNM-VRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 283 DIVIsAvG~p~~-v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+||+++|.++. ++.+|+++|.+++|++.++..+
T Consensus 82 Divi~at~~~~~~~~~~~l~~g~~vid~~~p~~~~ 116 (144)
T 3oj0_A 82 DVIITATSSKTPIVEERSLMPGKLFIDLGNPPNIE 116 (144)
T ss_dssp SEEEECSCCSSCSBCGGGCCTTCEEEECCSSCSBC
T ss_pred CEEEEeCCCCCcEeeHHHcCCCCEEEEccCCccCC
Confidence 999999998764 6789999999999999866433
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.6e-09 Score=101.96 Aligned_cols=129 Identities=22% Similarity=0.342 Sum_probs=97.0
Q ss_pred CCHHHHHH-HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhhccCC
Q 017438 220 CTPKGCIE-LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQA 282 (371)
Q Consensus 220 cTa~gvi~-lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~l~~A 282 (371)
+++..++. +|...+.++.||+|.|||.|.+ |+.++..|...|++|++++++. .++.+.++++
T Consensus 136 svae~a~~~~l~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~a 214 (293)
T 3d4o_A 136 PTAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDV 214 (293)
T ss_dssp HHHHHHHHHHHHHCSSCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTC
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCC
Confidence 34455444 5566788999999999999986 9999999999999999998763 2456678999
Q ss_pred cEEEEccCCCCcccCC---CcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcce----eccCCCCccHHHHHH
Q 017438 283 DIIISAVGQPNMVRGS---WIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASA----ITPVPGGVGPMTIAM 355 (371)
Q Consensus 283 DIVIsAvG~p~~v~~d---~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~----iTPVPGGVGp~T~am 355 (371)
|+||.+++. +++..+ .+|+|+++||++..+. +++++. .+..+. +.-.|+.++|.|.+.
T Consensus 215 DvVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~-------------~~~~~~-a~~~Gv~~~~~~~l~~~v~p~~a~~ 279 (293)
T 3d4o_A 215 DVCINTIPA-LVVTANVLAEMPSHTFVIDLASKPG-------------GTDFRY-AEKRGIKALLVPGLPGIVAPKTAGR 279 (293)
T ss_dssp SEEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTC-------------SBCHHH-HHHHTCEEEECCCHHHHHCHHHHHH
T ss_pred CEEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCC-------------CCCHHH-HHHCCCEEEECCCCCcccCHHHHHH
Confidence 999999975 455443 4689999999997542 344533 333332 245678888999999
Q ss_pred HHHHHHHHH
Q 017438 356 LLSNTLTSA 364 (371)
Q Consensus 356 Ll~n~v~a~ 364 (371)
++.|.+..+
T Consensus 280 ~~~~~~~~~ 288 (293)
T 3d4o_A 280 ILADVLVKL 288 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988654
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.3e-08 Score=100.19 Aligned_cols=169 Identities=23% Similarity=0.323 Sum_probs=122.9
Q ss_pred HHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhh
Q 017438 128 VRNKKKACQS-VGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 206 (371)
Q Consensus 128 v~~k~k~~~~-~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G 206 (371)
...|...++. -||++..+.+... +.+|+++.++.+- |.+.||++.- +. .-+--++++.+..+-|+.-||.--.|
T Consensus 96 ~egK~~Lf~~~agid~~pi~ldv~-~~dE~v~~vk~~~--p~f~~i~lED-~~-~p~af~il~r~r~~~~Ipvf~DDiqG 170 (388)
T 1vl6_A 96 MEGKAFLFKAFADIDAFPICLSES-EEEKIISIVKSLE--PSFGGINLED-IG-APKCFRILQRLSEEMNIPVFHDDQQG 170 (388)
T ss_dssp HHHHHHHHHHHHCCEEEEEECSCC-CHHHHHHHHHHTG--GGCSEEEECS-CC-TTHHHHHHHHHHHHCSSCEEEHHHHH
T ss_pred hhCHHHHHHhccCCceEeEEeCCC-CHHHHHHHHHHcC--CcceEeCHhh-cC-CHHHHHHHHHhhhhcCcceecccccc
Confidence 4567777775 6899999988753 6889999999876 5677876531 11 11222333333333344444422222
Q ss_pred hhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC----C---------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR----T--------- 272 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~----t--------- 272 (371)
.. -.+..|++..++-.+.+++..+|+|+|+|.+ |..++.+|...|+ +|++|+++ .
T Consensus 171 Ta----------sV~lAal~~A~~i~g~~l~~~kVVv~GAGaA-G~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~ 239 (388)
T 1vl6_A 171 TA----------VVVSAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNE 239 (388)
T ss_dssp HH----------HHHHHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSH
T ss_pred HH----------HHHHHHHHHHHHHhCCCCCCcEEEEECCCHH-HHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCH
Confidence 22 2334677777888888999999999999886 9999999999998 89999987 1
Q ss_pred ---------------CCHHhhccCCcEEEEccCCCCcccCCCcC---CCeEEEEeeecCC
Q 017438 273 ---------------KNPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVGINPV 314 (371)
Q Consensus 273 ---------------~~l~~~l~~ADIVIsAvG~p~~v~~d~ik---~gavVIDvgin~~ 314 (371)
.+|++.+++||++|.+++ |+++++||++ ++.+|+|+. ||.
T Consensus 240 ~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalS-NPt 297 (388)
T 1vl6_A 240 YHLEIARITNPERLSGDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALA-NPV 297 (388)
T ss_dssp HHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECC-SSS
T ss_pred HHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcC-CCC
Confidence 248899999999999998 8999999885 578999998 553
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.5e-09 Score=104.69 Aligned_cols=93 Identities=19% Similarity=0.330 Sum_probs=79.6
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCc
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQAD 283 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~AD 283 (371)
+++|+...+-.+++..+..+.||+|+|+|.|.+ |+.+|..|...|++|++++++. .++.+.+++||
T Consensus 190 ~~Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~AD 268 (436)
T 3h9u_A 190 LYGCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAH 268 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCS
T ss_pred cccchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCC
Confidence 345655555555566799999999999999986 9999999999999999998742 36889999999
Q ss_pred EEEEccCCCCcccCCCc---CCCeEEEEee
Q 017438 284 IIISAVGQPNMVRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 284 IVIsAvG~p~~v~~d~i---k~gavVIDvg 310 (371)
|||.++|..++|+.+++ |+|++|||+|
T Consensus 269 VVilt~gt~~iI~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 269 IFVTTTGNDDIITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp EEEECSSCSCSBCTTTGGGCCTTEEEEECS
T ss_pred EEEECCCCcCccCHHHHhhcCCCcEEEEeC
Confidence 99999999899988776 8999999999
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.9e-08 Score=101.20 Aligned_cols=90 Identities=19% Similarity=0.310 Sum_probs=75.9
Q ss_pred HHHHH-HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEc
Q 017438 223 KGCIE-LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~-lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsA 288 (371)
+.++. +.+..+..+.||+|+|+|.|.+ |+.+|..|...|++|+++++. ..++.+.+++|||||++
T Consensus 231 eslvdgI~Ratg~~L~GKTVgVIG~G~I-Gr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 231 ESLVDGIRRGTDVMMAGKVAVVCGYGDV-GKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTT 309 (464)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEEC
T ss_pred HHHHHHHHHhcCCcccCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEEC
Confidence 33344 4445789999999999999985 999999999999999999753 24688999999999999
Q ss_pred cCCCCcccCCCc---CCCeEEEEeeecC
Q 017438 289 VGQPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 289 vG~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+|.+++|+.+.+ |+|+++|++|.-.
T Consensus 310 tgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 999999987765 9999999999543
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.61 E-value=6.3e-08 Score=96.84 Aligned_cols=131 Identities=21% Similarity=0.239 Sum_probs=91.3
Q ss_pred HHHHHHHHHhCCC----------CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------
Q 017438 223 KGCIELLHRYGFD----------IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------- 273 (371)
Q Consensus 223 ~gvi~lL~~~~i~----------l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------- 273 (371)
.|++...++++-. +.+++|+|||.|.+ |..++..|...|++|++++++..
T Consensus 159 ~Av~~aa~~l~~~~~~l~~~~~~v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~ 237 (381)
T 3p2y_A 159 KAVLLGASLSTRFVPMLTTAAGTVKPASALVLGVGVA-GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDA 237 (381)
T ss_dssp HHHHHHHHHCSSCSSCEECSSCEECCCEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC---
T ss_pred HHHHHHHHHhhhhhhhhhcccCCcCCCEEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 4566666555332 58999999999875 99999999999999999987531
Q ss_pred --------------------CHHhhccCCcEEEEccCC-----CCcccCCCc---CCCeEEEEeeecCC---CCCCCCCC
Q 017438 274 --------------------NPEEITRQADIIISAVGQ-----PNMVRGSWI---KPGAVIIDVGINPV---EDAKSPRG 322 (371)
Q Consensus 274 --------------------~l~~~l~~ADIVIsAvG~-----p~~v~~d~i---k~gavVIDvgin~~---~~~~~~~g 322 (371)
++.+.+++|||||+++.. |.+|+.+++ |||+++||+++.+- ++ +..+
T Consensus 238 ~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~--t~~~ 315 (381)
T 3p2y_A 238 AGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCEL--TEPG 315 (381)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT--CCTT
T ss_pred cccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcccc--ccCC
Confidence 345788999999998743 457888775 88999999998752 11 0001
Q ss_pred ceeecccchhhhhhh-cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 323 YRLVGDVCYEEACEV-ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 323 ~kl~GDVd~~~v~~~-a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.+ |.. ..+ .-+++-.||-+ |.|...++.|.+..+
T Consensus 316 -----~~-~~~-~gV~~~~v~nlP~~v-p~tAS~~~s~~l~~~ 350 (381)
T 3p2y_A 316 -----RT-IVH-HGVTITSPLNLPATM-PEHASELYAKNVTAL 350 (381)
T ss_dssp -----CE-EEE-TTEEEECCSCTGGGS-HHHHHHHHHHHHHHH
T ss_pred -----Ce-EEE-CCEEEEeeCCCchhh-HHHHHHHHHHHHHHH
Confidence 10 100 111 11245578888 999988888877554
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=7.9e-08 Score=97.54 Aligned_cols=93 Identities=22% Similarity=0.349 Sum_probs=77.8
Q ss_pred CHHHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEE
Q 017438 221 TPKGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIII 286 (371)
Q Consensus 221 Ta~gvi~lL~-~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVI 286 (371)
|...++.-+. ..+..+.||+|+|+|.|.+ |+.+|..|...|++|++++++ ..++.+.+++|||||
T Consensus 202 t~~s~~~gi~rat~~~L~GktV~ViG~G~I-Gk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi 280 (435)
T 3gvp_A 202 CRESILDGLKRTTDMMFGGKQVVVCGYGEV-GKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVI 280 (435)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEE
T ss_pred hHHHHHHHHHHhhCceecCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEE
Confidence 4455555444 4678999999999999985 999999999999999999864 246888999999999
Q ss_pred EccCCCCcccCCCc---CCCeEEEEeeecCC
Q 017438 287 SAVGQPNMVRGSWI---KPGAVIIDVGINPV 314 (371)
Q Consensus 287 sAvG~p~~v~~d~i---k~gavVIDvgin~~ 314 (371)
+++|.+++|+.+.+ |+|++||++|....
T Consensus 281 ~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 281 TCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp ECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred ECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 99999999987664 99999999996543
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.4e-07 Score=93.32 Aligned_cols=132 Identities=21% Similarity=0.316 Sum_probs=89.8
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------
Q 017438 223 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------- 273 (371)
Q Consensus 223 ~gvi~lL~~~~i----------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------- 273 (371)
.|++.-.++++- .+.+.+|+|+|.|. +|..++.+|...||.|++++++..
T Consensus 165 ~Av~~aa~~l~~~~~~l~t~~g~v~~~kV~ViG~G~-iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~ 243 (405)
T 4dio_A 165 QAVIDAAYEYDRALPMMMTAAGTVPAAKIFVMGAGV-AGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEE 243 (405)
T ss_dssp HHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC--
T ss_pred HHHHHHHHHhHhhhchhhccCCCcCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeeccccc
Confidence 456666665542 46889999999987 599999999999999999976521
Q ss_pred ------------------------CHHhhccCCcEEEEccC-----CCCcccCCCc---CCCeEEEEeeecCC---CCCC
Q 017438 274 ------------------------NPEEITRQADIIISAVG-----QPNMVRGSWI---KPGAVIIDVGINPV---EDAK 318 (371)
Q Consensus 274 ------------------------~l~~~l~~ADIVIsAvG-----~p~~v~~d~i---k~gavVIDvgin~~---~~~~ 318 (371)
++.+.+++|||||+++. .|.+|+.+++ |||++|||+++.+- ++
T Consensus 244 ~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~-- 321 (405)
T 4dio_A 244 FKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG-- 321 (405)
T ss_dssp ---------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT--
T ss_pred ccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc--
Confidence 34566789999999874 3557888775 88999999998652 21
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
+..+..+. ...+ ..-+++-.||-+ |.|+..++.|.+-.+
T Consensus 322 t~~~~~~~----~~GV--~~~gv~nlP~~v-p~tAS~~ls~~~~~~ 360 (405)
T 4dio_A 322 AEAGKVTE----VGGV--RIVGHLNVAGRI-AASASLLYAKNLVTF 360 (405)
T ss_dssp CCTTEEEE----ETTE--EEEECSSGGGGG-HHHHHHHHHHHHHHH
T ss_pred cCCCCeEE----ECCE--EEEEeCCCCccC-HHHHHHHHHHHHHHH
Confidence 10110110 0010 011234468877 888888887766544
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=98.48 E-value=5.5e-07 Score=90.38 Aligned_cols=169 Identities=20% Similarity=0.308 Sum_probs=123.1
Q ss_pred HHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhh
Q 017438 128 VRNKKKACQS-VGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 206 (371)
Q Consensus 128 v~~k~k~~~~-~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G 206 (371)
...|...++. -||++.-+.+... +.+|+.+.++.+- |.+.||++.- +. .-+--++++.....-|+.-||.--.|
T Consensus 92 ~eGK~~Lf~~~agid~~pi~Ldv~-~~dEfv~~v~~~~--p~F~~I~lED-~~-~p~~f~il~~~r~~~~ipvf~DDiqG 166 (398)
T 2a9f_A 92 MEGKAALFKAFAGVDAIPIVLDTK-DTEEIISIVKALA--PTFGGINLED-IS-APRCFEIEQRLIKECHIPVFHDDQHG 166 (398)
T ss_dssp HHHHHHHHHHHSSCEEEEEECCCC-CHHHHHHHHHHHG--GGCSEEEECS-CC-TTHHHHHHHHHHHHCSSCEEEHHHHH
T ss_pred hhCHHHHHHhccCCceeeeEeCCC-CHHHHHHHHHHcC--CceeEecccc-CC-ChHHHHHHHHhhhcCCcceecchhhh
Confidence 4578877775 6899999999753 6889999999887 6788887641 10 11222333333222234444432223
Q ss_pred hhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------- 271 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------- 271 (371)
.- -.+-.|.+..++-.+..++..+|||+|+|.+ |..++.+|...|+ +|++|+++
T Consensus 167 Ta----------~V~lAall~al~l~g~~l~d~kVVi~GAGaA-G~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~ 235 (398)
T 2a9f_A 167 TA----------IVVLAAIFNSLKLLKKSLDEVSIVVNGGGSA-GLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPH 235 (398)
T ss_dssp HH----------HHHHHHHHHHHHTTTCCTTSCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC-
T ss_pred HH----------HHHHHHHHHHHHHhCCCCCccEEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCCcccCCccccchHH
Confidence 22 2334678888888889999999999999875 9999999999999 99999875
Q ss_pred -------------CCCHHhhccCCcEEEEccCCCCcccCCCc---CCCeEEEEeeecCC
Q 017438 272 -------------TKNPEEITRQADIIISAVGQPNMVRGSWI---KPGAVIIDVGINPV 314 (371)
Q Consensus 272 -------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~i---k~gavVIDvgin~~ 314 (371)
..+|++.++.||++|.+.+ |+++++||| +++.+|+|+. ||.
T Consensus 236 k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfals-NPt 292 (398)
T 2a9f_A 236 HLDIAKVTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMA-NPI 292 (398)
T ss_dssp --CHHHHHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECC-SSS
T ss_pred HHHHhhccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECC-CCC
Confidence 1237788999999998877 999999997 5799999998 654
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=2.9e-07 Score=94.86 Aligned_cols=83 Identities=25% Similarity=0.318 Sum_probs=72.1
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCCcccC
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNMVRG 297 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~~v~~ 297 (371)
..+.++.||+|+|||.|.+ |+.+|..|...|++|++++++. .++++.+++||+||++++.+++|+.
T Consensus 270 ~~g~~L~GktVgIIG~G~I-G~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~ 348 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDV-GKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINH 348 (494)
T ss_dssp HHCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCH
T ss_pred ccccccCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCH
Confidence 4677899999999999885 9999999999999999998753 2578899999999999988888987
Q ss_pred CC---cCCCeEEEEeeecCC
Q 017438 298 SW---IKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d~---ik~gavVIDvgin~~ 314 (371)
+. +|+|+++||+|.-..
T Consensus 349 ~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp HHHHHCCTTEEEEECSSSSC
T ss_pred HHHhhCCCCcEEEEcCCCcc
Confidence 65 599999999996544
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.7e-06 Score=85.63 Aligned_cols=78 Identities=27% Similarity=0.420 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC----------------------------------------
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------------------------- 274 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------------------------- 274 (371)
++.|++|+|+|.|.+ |+.++..+...|+.|++++++...
T Consensus 169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 169 TVPPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 678999999999875 999999999999999999865211
Q ss_pred ---HHhhccCCcEEEEcc---CC--CCcccCC---CcCCCeEEEEeeecC
Q 017438 275 ---PEEITRQADIIISAV---GQ--PNMVRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 275 ---l~~~l~~ADIVIsAv---G~--p~~v~~d---~ik~gavVIDvgin~ 313 (371)
+.+.++.+|+||.++ |. |++++.+ .+++|.+|||+++++
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~ 297 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA 297 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCC
Confidence 556778999999999 53 4566654 458999999999865
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=98.38 E-value=4.1e-07 Score=93.48 Aligned_cols=83 Identities=24% Similarity=0.316 Sum_probs=71.5
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCCcccC
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNMVRG 297 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~~v~~ 297 (371)
..+..+.||+|+|||.|.+ |+.+|..|...|++|++++++. .++++.+++||+||++++.+++|+.
T Consensus 250 ~~~~~l~GktVgIIG~G~I-G~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~ 328 (479)
T 1v8b_A 250 ATDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKL 328 (479)
T ss_dssp HHCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCH
T ss_pred ccccccCCCEEEEEeeCHH-HHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCH
Confidence 4577899999999999885 9999999999999999998753 3577889999999999988888876
Q ss_pred C---CcCCCeEEEEeeecCC
Q 017438 298 S---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d---~ik~gavVIDvgin~~ 314 (371)
+ .+|+|+++||+|....
T Consensus 329 ~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 329 EHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp HHHTTCCTTCEEEECSSTTT
T ss_pred HHHhhcCCCcEEEEeCCCCc
Confidence 4 4689999999996443
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-05 Score=79.50 Aligned_cols=134 Identities=17% Similarity=0.212 Sum_probs=89.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC----CCccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ----PNMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~----p~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+..++. .+++.
T Consensus 168 g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRI-GRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp BCCCTTCEEEEESCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC
T ss_pred ccccCCCEEEEEEeChh-HHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC
Confidence 46799999999999996 9999999999999999998753 3788899999999999984 24676
Q ss_pred CCC---cCCCeEEEEeeecCCCCCCC-----CCCceeec---ccchhh-------hhhhcceeccCCCCccHHHHHHHHH
Q 017438 297 GSW---IKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCYEE-------ACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 297 ~d~---ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~~~-------v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
.+. +|+|+++||++--.+.+... ..| ++-| ||-..+ ..-..-.+||=-||.-.-+..-+..
T Consensus 247 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g-~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~ 325 (345)
T 4g2n_A 247 HDRIAKIPEGAVVINISRGDLINDDALIEALRSK-HLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGW 325 (345)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT-SEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC-CceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHH
Confidence 543 69999999998543211000 001 3333 431111 1111245788778876655555555
Q ss_pred HHHHHHHHHh
Q 017438 359 NTLTSAKRVH 368 (371)
Q Consensus 359 n~v~a~~~~~ 368 (371)
.+++..++++
T Consensus 326 ~~~~ni~~~l 335 (345)
T 4g2n_A 326 LLIQGIEALN 335 (345)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555544443
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=98.33 E-value=7.9e-06 Score=80.69 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=67.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC-C---Cc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ-P---NM 294 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~-p---~~ 294 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+.+++. | ++
T Consensus 159 ~~~l~gktvGIIG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~l 237 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRI-GKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGM 237 (351)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred cccccCCEEeEEEeCHH-HHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHh
Confidence 56899999999999996 9999999999999999998652 3688899999999999983 2 35
Q ss_pred ccCC---CcCCCeEEEEeeecC
Q 017438 295 VRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 295 v~~d---~ik~gavVIDvgin~ 313 (371)
+..+ .+|+|+++||++-..
T Consensus 238 i~~~~l~~mk~gailIN~aRG~ 259 (351)
T 3jtm_A 238 FNKELIGKLKKGVLIVNNARGA 259 (351)
T ss_dssp BSHHHHHHSCTTEEEEECSCGG
T ss_pred hcHHHHhcCCCCCEEEECcCch
Confidence 6554 369999999999543
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=5.8e-07 Score=89.70 Aligned_cols=138 Identities=14% Similarity=0.175 Sum_probs=86.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-----------------CCHHhhccCCcE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----------------KNPEEITRQADI 284 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-----------------~~l~~~l~~ADI 284 (371)
...+++.+....++.|++|+|||+|++ |+.++..|...|+ +|++++++. .++.+.+.++|+
T Consensus 152 ~~av~~a~~~~~~l~g~~VlIiGaG~i-G~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDv 230 (404)
T 1gpj_A 152 SAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDV 230 (404)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSE
T ss_pred HHHHHHHHHHhccccCCEEEEEChHHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCE
Confidence 344454442222679999999999886 9999999999998 899998763 134456788999
Q ss_pred EEEccCCCCc-ccCCCc---------CCCeEEEEeeecCCCCCC--CCCCceeecccc-hhhhhh---hcceeccCCCCc
Q 017438 285 IISAVGQPNM-VRGSWI---------KPGAVIIDVGINPVEDAK--SPRGYRLVGDVC-YEEACE---VASAITPVPGGV 348 (371)
Q Consensus 285 VIsAvG~p~~-v~~d~i---------k~gavVIDvgin~~~~~~--~~~g~kl~GDVd-~~~v~~---~a~~iTPVPGGV 348 (371)
||+++|.+.. ++.+++ .++.++||++.++..++. ...+ -.+=|+| +..+.+ ..+. ..-.|
T Consensus 231 Vi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~~i~~~l~~l~~-v~l~d~d~l~~~~~~~~~~r~--~~~~~- 306 (404)
T 1gpj_A 231 VVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIED-VEVRTIDDLRVIARENLERRR--KEIPK- 306 (404)
T ss_dssp EEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGSTT-EEEEEHHHHHHHHHHHHHHHH--TTHHH-
T ss_pred EEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCCCCCccccccCC-eEEEeHhhHHHHHHHHHHHHH--HHHHH-
Confidence 9999997765 443332 256899999985532320 0011 1111121 111111 1111 11112
Q ss_pred cHHHHHHHHHHHHHHHHHHhc
Q 017438 349 GPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 349 Gp~T~amLl~n~v~a~~~~~~ 369 (371)
..|++.+.++.++.|++
T Consensus 307 ----~~~li~q~~~~f~~w~~ 323 (404)
T 1gpj_A 307 ----VEKLIEEELSTVEEELE 323 (404)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHH
Confidence 44999999999999985
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-06 Score=88.42 Aligned_cols=84 Identities=26% Similarity=0.389 Sum_probs=71.4
Q ss_pred HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCCc
Q 017438 228 LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 228 lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
+.+..+..+.||+|+|+|.|+ +|+.+|..|...||+|+++.++. .++++..+.+|+++.++|.++.
T Consensus 255 i~r~tg~~L~GKtVvVtGaGg-IG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~v 333 (488)
T 3ond_A 255 LMRATDVMIAGKVAVVAGYGD-VGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDI 333 (488)
T ss_dssp HHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCS
T ss_pred HHHHcCCcccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhh
Confidence 334578899999999999996 59999999999999999997752 3566778899999999999888
Q ss_pred ccC---CCcCCCeEEEEeeec
Q 017438 295 VRG---SWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v~~---d~ik~gavVIDvgin 312 (371)
+.. +.+++|++|+++|..
T Consensus 334 l~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 334 IMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp BCHHHHTTSCTTEEEEESSST
T ss_pred hhHHHHHhcCCCeEEEEcCCC
Confidence 865 456999999999964
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.1e-06 Score=85.88 Aligned_cols=143 Identities=18% Similarity=0.242 Sum_probs=96.5
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------CCCHHhhccCCcEEEEccC-C---
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIIISAVG-Q--- 291 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------t~~l~~~l~~ADIVIsAvG-~--- 291 (371)
++.+.++.+.++.||++.|||.|.+ |+.+|..|...|++|+.+++. ..++++.+++||+|+..++ .
T Consensus 106 lL~l~r~~g~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g 184 (381)
T 3oet_A 106 LLMLAERDGFSLRDRTIGIVGVGNV-GSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDG 184 (381)
T ss_dssp HHHHHHHTTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSS
T ss_pred HHHHHHhcCCccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccc
Confidence 3445566789999999999999996 999999999999999998642 2468899999999998887 2
Q ss_pred ----CCcccCCC---cCCCeEEEEeeecCCCCCCC-----CCCceeec---ccchh------hhhhhcceeccCCCCccH
Q 017438 292 ----PNMVRGSW---IKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCYE------EACEVASAITPVPGGVGP 350 (371)
Q Consensus 292 ----p~~v~~d~---ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~~------~v~~~a~~iTPVPGGVGp 350 (371)
.+++..+. +|+|+++||++--.+-+... ..| ++.| ||-.. ...+..-.+||=-||.-.
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g-~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~ 263 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAG-QPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTL 263 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT-CCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCH
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC-CCeEEEeeccccCCCCcchhhhCCEEECCccCcCcH
Confidence 23565543 68999999999554321000 001 2322 55211 112223368998888766
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 017438 351 MTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 351 ~T~amLl~n~v~a~~~~~~ 369 (371)
-+..-....+++...++++
T Consensus 264 e~~~~~~~~~~~~l~~~l~ 282 (381)
T 3oet_A 264 EGKARGTTQVFEAYSAFIG 282 (381)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 6655555555555555554
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.9e-05 Score=78.47 Aligned_cols=81 Identities=20% Similarity=0.318 Sum_probs=67.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC-C---CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ-P---NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~-p---~~v~~d 298 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.+++.. .++++.+++||+|+..++. + +++..+
T Consensus 151 ~~el~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~ 229 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNI-GSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEA 229 (416)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHH
T ss_pred CccCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHH
Confidence 46899999999999996 9999999999999999998642 3688999999999999984 2 467654
Q ss_pred ---CcCCCeEEEEeeecCC
Q 017438 299 ---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 ---~ik~gavVIDvgin~~ 314 (371)
.+|+|+++||++--..
T Consensus 230 ~l~~mk~gailIN~aRG~v 248 (416)
T 3k5p_A 230 KLRKMKKGAFLINNARGSD 248 (416)
T ss_dssp HHHHSCTTEEEEECSCTTS
T ss_pred HHhhCCCCcEEEECCCChh
Confidence 3699999999996543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=9.5e-07 Score=88.41 Aligned_cols=78 Identities=22% Similarity=0.349 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------------------------
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------------------------- 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------------------------- 273 (371)
++.|++|+|+|.|.+ |..++.++...|+.|++++++..
T Consensus 169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 169 KVPPAKVMVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence 478999999999875 99999999999999999987521
Q ss_pred CHHhhccCCcEEEEccCC-----CCcccCCC---cCCCeEEEEeeecC
Q 017438 274 NPEEITRQADIIISAVGQ-----PNMVRGSW---IKPGAVIIDVGINP 313 (371)
Q Consensus 274 ~l~~~l~~ADIVIsAvG~-----p~~v~~d~---ik~gavVIDvgin~ 313 (371)
++.+.++.+|+||++++. |.+++.++ +++|.+|||+++.+
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~ 295 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQN 295 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCC
Confidence 255667789999999644 35676554 58999999999764
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=98.14 E-value=5.1e-06 Score=81.22 Aligned_cols=80 Identities=25% Similarity=0.344 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v~ 296 (371)
+.++.||++.|||.|.+ |+++|..|...|++|+.++++. .++++.+++||+|+..++. | +++.
T Consensus 135 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~ 213 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSI-GQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFT 213 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred CcccccceEEEEEECHH-HHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence 45899999999999996 9999999999999999998652 2577889999999999883 2 3566
Q ss_pred CCC---cCCCeEEEEeeecC
Q 017438 297 GSW---IKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~---ik~gavVIDvgin~ 313 (371)
.+. +|+|+++||++--.
T Consensus 214 ~~~l~~mk~gailIN~aRG~ 233 (324)
T 3hg7_A 214 ASRFEHCKPGAILFNVGRGN 233 (324)
T ss_dssp TTTTTCSCTTCEEEECSCGG
T ss_pred HHHHhcCCCCcEEEECCCch
Confidence 554 58999999999544
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.5e-06 Score=87.23 Aligned_cols=124 Identities=16% Similarity=0.169 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---CCHHhhccCCcEEEEccC----CCCcccCCCc----CC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---KNPEEITRQADIIISAVG----QPNMVRGSWI----KP 302 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---~~l~~~l~~ADIVIsAvG----~p~~v~~d~i----k~ 302 (371)
...+|+|||++|.||+.++.++...|| .|++.+.+. ....+.++++||||+++- .|.+|+.+|+ ||
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~~~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~ 292 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRR 292 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCCTHHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCchhhHhhCCEEEECcCcCCCCCcccCHHHHhcCcCC
Confidence 567899999966689999999999998 899997642 111256789999999986 4888998876 88
Q ss_pred CeEEEEeeecCC---CC------CCCCCC--ceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 303 GAVIIDVGINPV---ED------AKSPRG--YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 303 gavVIDvgin~~---~~------~~~~~g--~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
|++||||.+.+- ++ ++++.. +..-|+ +-+.+ ..-+++-.||-+ |.|...++.|.+--+
T Consensus 293 gsVIVDVA~D~GG~~et~~f~~~~Tt~~~P~~~~~g~-~~~~V--~~~~v~nlP~~l-PrtAS~~~sn~llp~ 361 (394)
T 2qrj_A 293 LRTVVDVSADTTNPHNPIPIYTVATVFNKPTVLVPTT-AGPKL--SVISIDHLPSLL-PREASEFFSHDLLPS 361 (394)
T ss_dssp CCEEEETTCCTTCTTCSSCSCCCCCBTTBCCEEECCS-SSSCE--EEECCTTGGGGS-HHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCCCcCcccccccCCccCCCEEEECCC-CCCCE--EEEEeCChhhhh-HHHHHHHHHHHHHHH
Confidence 999999987652 10 111111 000010 00000 112355678888 999999988877544
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.2e-05 Score=76.93 Aligned_cols=133 Identities=17% Similarity=0.128 Sum_probs=90.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+.+++.. +++.
T Consensus 160 ~~~l~g~tvgIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 160 GTELNGKTLGILGLGRI-GREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC
T ss_pred CcCCCcCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC
Confidence 35799999999999996 9999999999999999998653 25778899999999998843 3564
Q ss_pred C---CCcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccc-------hhhhhhhcceeccCCCCccHHHHHHHHH
Q 017438 297 G---SWIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVC-------YEEACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd-------~~~v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
. +.+|+|+++||++...+.+... ..| ++-| ||- .+-.....-.+||-.+|.-.-+..-+..
T Consensus 239 ~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~ 317 (335)
T 2g76_A 239 DNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG-QCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGE 317 (335)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT-SEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC-CccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHH
Confidence 3 4579999999999754322000 001 2322 331 1111122346899888887766555555
Q ss_pred HHHHHHHHH
Q 017438 359 NTLTSAKRV 367 (371)
Q Consensus 359 n~v~a~~~~ 367 (371)
.+++..+++
T Consensus 318 ~~~~nl~~~ 326 (335)
T 2g76_A 318 EIAVQFVDM 326 (335)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555554444
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=98.10 E-value=3e-06 Score=82.45 Aligned_cols=80 Identities=13% Similarity=0.178 Sum_probs=66.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CHHhhccCCcEEEEccCC----CCccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NPEEITRQADIIISAVGQ----PNMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l~~~l~~ADIVIsAvG~----p~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++.+ ++++.+++||+|+.+++. .+++.
T Consensus 134 ~~~l~g~tvGIiG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~ 212 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVL-GAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN 212 (315)
T ss_dssp CCCSTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred CCCcCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence 35789999999999996 99999999999999999987532 477889999999999873 24565
Q ss_pred C---CCcCCCeEEEEeeecC
Q 017438 297 G---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~ 313 (371)
. +.+|+|+++||++--.
T Consensus 213 ~~~l~~mk~gailIN~aRG~ 232 (315)
T 3pp8_A 213 SELLDQLPDGAYVLNLARGV 232 (315)
T ss_dssp HHHHTTSCTTEEEEECSCGG
T ss_pred HHHHhhCCCCCEEEECCCCh
Confidence 4 3579999999999443
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=4.2e-06 Score=81.80 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=66.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCC----CCcc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ----PNMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~----p~~v 295 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+++. .+++
T Consensus 140 ~~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAI-GLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLV 218 (330)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCccCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHh
Confidence 45789999999999996 9999999999999999998763 2567889999999999883 2356
Q ss_pred cC---CCcCCCeEEEEeeecC
Q 017438 296 RG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 296 ~~---d~ik~gavVIDvgin~ 313 (371)
.. ..+|+|+++||++-..
T Consensus 219 ~~~~l~~mk~gailIN~arg~ 239 (330)
T 4e5n_A 219 NAELLALVRPGALLVNPCRGS 239 (330)
T ss_dssp CHHHHTTSCTTEEEEECSCGG
T ss_pred CHHHHhhCCCCcEEEECCCCc
Confidence 54 3569999999999543
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=98.07 E-value=7e-06 Score=79.71 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC-CC-------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS-RT-------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~-~t-------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
.++.||++.|||.|.+ |+.+|..|...|++|+++++ +. .++++.+++||+|+.+++. | +++
T Consensus 142 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhc
Confidence 4789999999999996 99999999999999999987 43 2677888999999999983 2 356
Q ss_pred cC---CCcCCCeEEEEeeecC
Q 017438 296 RG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 296 ~~---d~ik~gavVIDvgin~ 313 (371)
.. +.+|+|+++||++...
T Consensus 221 ~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 221 NKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp SHHHHTTSCTTEEEEECSCGG
T ss_pred CHHHHhhCCCCcEEEECCCCc
Confidence 44 5689999999999653
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.1e-06 Score=82.64 Aligned_cols=80 Identities=18% Similarity=0.272 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC----CCccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ----PNMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~----p~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+++. .+++.
T Consensus 132 ~~~l~gktvGIiGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~ 210 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQI-GQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFS 210 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS
T ss_pred CccccCCeEEEECcCHH-HHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcC
Confidence 56899999999999996 9999999999999999998753 2567889999999999873 24565
Q ss_pred CC---CcCCCeEEEEeeecC
Q 017438 297 GS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~ 313 (371)
.+ .+|+|+++||+|--.
T Consensus 211 ~~~l~~mk~gailIN~aRG~ 230 (324)
T 3evt_A 211 TELFQQTKQQPMLINIGRGP 230 (324)
T ss_dssp HHHHHTCCSCCEEEECSCGG
T ss_pred HHHHhcCCCCCEEEEcCCCh
Confidence 54 469999999999543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.06 E-value=4.1e-06 Score=82.24 Aligned_cols=156 Identities=21% Similarity=0.274 Sum_probs=99.0
Q ss_pred HHHHcCC-eEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE-eCCCCCCCCHHHHHhhCCc-ccccCc-cCcchhhhhc
Q 017438 134 ACQSVGI-NSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILV-QLPLPCHIDEQSILNAVSM-EKDVDG-FHPLNIGRLA 209 (371)
Q Consensus 134 ~~~~~GI-~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlV-qlPLp~~i~~~~i~~~I~p-~KDVDg-l~~~N~G~l~ 209 (371)
.+.+.|. .+.|.++. ++ .++.+.+.+. ++.|+.+ ++|++.+ ...+++.+++ +.-+-. +...|+.+..
T Consensus 82 ~~~~~g~~~~~y~~~~--~~-~~l~~~l~~~----gi~~~~~etvp~k~~--~~~~l~~~s~~Ag~~a~~~gA~nt~~~~ 152 (361)
T 1pjc_A 82 DLMQKDQLLFTYLHLA--AA-RELTEQLMRV----GLTAIAYETVELPNR--SLPLLTPMSIIAGRLSVQFGARFLERQQ 152 (361)
T ss_dssp GGCCTTCEEEECCCGG--GC-HHHHHHHHHH----TCEEEEGGGCCCTTS--CCTTTHHHHHHHHHHHHHHHHHHTSGGG
T ss_pred HhhcCCCEEEEEeccc--cC-HHHHHHHHHc----CCeEEEEeeeEcccC--CccccCcchHHHHHHHHHHHHHHHhhcc
Confidence 3445675 77776665 33 3577777665 5889998 8998642 1122333322 111100 0234444433
Q ss_pred cCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------
Q 017438 210 MRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------- 273 (371)
Q Consensus 210 ~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------- 273 (371)
.| .+|. |... ..+++++|+|+|+|++ |+.++..|...|++|++++++..
T Consensus 153 ~g---~G~~----------l~~l-~~l~~~~VlViGaGgv-G~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~ 217 (361)
T 1pjc_A 153 GG---RGVL----------LGGV-PGVKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL 217 (361)
T ss_dssp TS---CCCC----------TTCB-TTBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE
T ss_pred CC---Ccee----------ccCC-CCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee
Confidence 11 1332 1000 1367899999999775 99999999999999999987621
Q ss_pred -----CHHhhccCCcEEEEccCCCC-----ccc---CCCcCCCeEEEEeeecC
Q 017438 274 -----NPEEITRQADIIISAVGQPN-----MVR---GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 274 -----~l~~~l~~ADIVIsAvG~p~-----~v~---~d~ik~gavVIDvgin~ 313 (371)
++.+.++.+|+||+++|.|. ++. -+.+++|.+|+|+++++
T Consensus 218 ~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 218 YSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp ECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred eCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence 23355678999999998654 233 25679999999999876
|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.05 E-value=5.2e-06 Score=82.90 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=94.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------CCCHHhhccCCcEEEEccCC----
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIIISAVGQ---- 291 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------t~~l~~~l~~ADIVIsAvG~---- 291 (371)
++.+.++.+.++.||++.|||.|.+ |+.+|..|...|++|+++++. ..++.+.+++||+|+..++.
T Consensus 103 lL~l~r~~~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g 181 (380)
T 2o4c_A 103 LLAMAEVRGADLAERTYGVVGAGQV-GGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDG 181 (380)
T ss_dssp HHHHHHHHTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSS
T ss_pred HHHHHhhhhcccCCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCcccc
Confidence 3445556788999999999999996 999999999999999998642 24688899999999998872
Q ss_pred ----CCcccCC---CcCCCeEEEEeeecCCCCCCC-----CCCc--eeecccchh------hhhhhcceeccCCCCccHH
Q 017438 292 ----PNMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRGY--RLVGDVCYE------EACEVASAITPVPGGVGPM 351 (371)
Q Consensus 292 ----p~~v~~d---~ik~gavVIDvgin~~~~~~~-----~~g~--kl~GDVd~~------~v~~~a~~iTPVPGGVGp~ 351 (371)
.++++.+ .+|+|+++||++...+.+... ..|. ...=||-.. ...+..-.+||=-+|.-.-
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t~e 261 (380)
T 2o4c_A 182 EHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLE 261 (380)
T ss_dssp SSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCCHH
T ss_pred ccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCCHH
Confidence 2345543 469999999999654322100 0010 122244211 1122234689988887766
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017438 352 TIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 352 T~amLl~n~v~a~~~~~ 368 (371)
+..-....+++...+++
T Consensus 262 ~~~~~~~~~~~nl~~~l 278 (380)
T 2o4c_A 262 GKLRGTAQIYQAYCAWR 278 (380)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 65555555555555444
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=6.3e-06 Score=79.55 Aligned_cols=78 Identities=24% Similarity=0.329 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------CCHHhhccCCcEEEEccCCC----CcccC---CC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------KNPEEITRQADIIISAVGQP----NMVRG---SW 299 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------~~l~~~l~~ADIVIsAvG~p----~~v~~---d~ 299 (371)
++.||++.|||.|.+ |+.+|..|...|++|++++++. .++.+.+++||+|+.+++.. +++.. +.
T Consensus 121 ~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred CCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhh
Confidence 689999999999996 9999999999999999988653 36788999999999998742 35653 45
Q ss_pred cCCCeEEEEeeecC
Q 017438 300 IKPGAVIIDVGINP 313 (371)
Q Consensus 300 ik~gavVIDvgin~ 313 (371)
+|+|+++||++...
T Consensus 200 mk~gailin~srg~ 213 (303)
T 1qp8_A 200 MAEDAVFVNVGRAE 213 (303)
T ss_dssp SCTTCEEEECSCGG
T ss_pred CCCCCEEEECCCCc
Confidence 79999999999654
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-06 Score=81.00 Aligned_cols=78 Identities=22% Similarity=0.296 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccC---
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRG--- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~--- 297 (371)
.++.||++.|||.|.+ |+++|..|...|++|+.++++. .++++.+++||+|+.+++. + +++..
T Consensus 118 ~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l 196 (290)
T 3gvx_A 118 TLLYGKALGILGYGGI-GRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLL 196 (290)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHH
T ss_pred eeeecchheeeccCch-hHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHH
Confidence 3689999999999996 9999999999999999998753 3788999999999999983 3 34544
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
+.+|+|+++||++--
T Consensus 197 ~~mk~gailIN~aRG 211 (290)
T 3gvx_A 197 ANARKNLTIVNVARA 211 (290)
T ss_dssp TTCCTTCEEEECSCG
T ss_pred hhhhcCceEEEeehh
Confidence 457999999999943
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=3.8e-06 Score=82.73 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=65.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC----CCcccCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ----PNMVRGSW 299 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~----p~~v~~d~ 299 (371)
.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+.+++. .+++..+.
T Consensus 144 ~~l~gktvgIiGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~ 222 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHI-GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQ 222 (343)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred cccCCCeEEEEecCHH-HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHH
Confidence 4688999999999996 9999999999999999998763 2577889999999999983 34566543
Q ss_pred ---cCCCeEEEEeeecC
Q 017438 300 ---IKPGAVIIDVGINP 313 (371)
Q Consensus 300 ---ik~gavVIDvgin~ 313 (371)
+|+|+++||++--.
T Consensus 223 l~~mk~gailIN~aRg~ 239 (343)
T 2yq5_A 223 LKEMKKSAYLINCARGE 239 (343)
T ss_dssp HHHSCTTCEEEECSCGG
T ss_pred HhhCCCCcEEEECCCCh
Confidence 69999999999543
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.7e-06 Score=81.40 Aligned_cols=134 Identities=23% Similarity=0.314 Sum_probs=83.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccCC-
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRGS- 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~d- 298 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+++. | +++..+
T Consensus 166 ~~~l~gktiGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~ 244 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQI-GRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASL 244 (340)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHH
T ss_pred cccccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHH
Confidence 35899999999999996 9999999999999999998753 3688999999999999883 2 345444
Q ss_pred --CcCCCeEEEEeeecCCCCCCC----CCCceeec---ccchhh------hhh-hcceeccCCCCccHHHHHHHHHHHHH
Q 017438 299 --WIKPGAVIIDVGINPVEDAKS----PRGYRLVG---DVCYEE------ACE-VASAITPVPGGVGPMTIAMLLSNTLT 362 (371)
Q Consensus 299 --~ik~gavVIDvgin~~~~~~~----~~g~kl~G---DVd~~~------v~~-~a~~iTPVPGGVGp~T~amLl~n~v~ 362 (371)
.+|+|+++||++--...+... -+.+++-| ||-..+ ..+ ..-.+||=-||.-.-+..-+...+++
T Consensus 245 l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ 324 (340)
T 4dgs_A 245 LQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLA 324 (340)
T ss_dssp HHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHH
Confidence 369999999998554322100 00012322 442111 111 12368887788766554444444444
Q ss_pred HHHHH
Q 017438 363 SAKRV 367 (371)
Q Consensus 363 a~~~~ 367 (371)
..+++
T Consensus 325 nl~~~ 329 (340)
T 4dgs_A 325 NLAAH 329 (340)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.02 E-value=4e-05 Score=76.08 Aligned_cols=134 Identities=15% Similarity=0.149 Sum_probs=87.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---CcccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMVRG 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v~~ 297 (371)
.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+++. | +++..
T Consensus 172 ~~l~gktvGIIGlG~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDL-GKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp CCSSSSEEEEECCSHH-HHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCH
T ss_pred cccCCCEEEEecCCcc-cHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCH
Confidence 5788999999999996 9999999999999999988652 3577889999999998873 2 35655
Q ss_pred C---CcCCCeEEEEeeecCCCCCCC-----CCC-ceeecccchh--------hhhhhcceeccCCCCccHHHHHHHHHHH
Q 017438 298 S---WIKPGAVIIDVGINPVEDAKS-----PRG-YRLVGDVCYE--------EACEVASAITPVPGGVGPMTIAMLLSNT 360 (371)
Q Consensus 298 d---~ik~gavVIDvgin~~~~~~~-----~~g-~kl~GDVd~~--------~v~~~a~~iTPVPGGVGp~T~amLl~n~ 360 (371)
+ .+|+|+++||++--..-+... ..| -...=||-.. -..-..-.+||=-||.-.-+...+...+
T Consensus 251 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~ 330 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMV 330 (365)
T ss_dssp HHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHH
Confidence 4 469999999999332111000 000 0000022100 0011124689988888777766666666
Q ss_pred HHHHHHHh
Q 017438 361 LTSAKRVH 368 (371)
Q Consensus 361 v~a~~~~~ 368 (371)
++..++|+
T Consensus 331 ~~ni~~~~ 338 (365)
T 4hy3_A 331 LEDMDLMD 338 (365)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555554
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=79.68 Aligned_cols=81 Identities=25% Similarity=0.348 Sum_probs=67.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC--------------CCHHhhccCCcEEEEccCCC----C
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT--------------KNPEEITRQADIIISAVGQP----N 293 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p----~ 293 (371)
+.++.||++.|||.|.+ |+.+|..|...|++ |++++++. .++.+.+++||+|+.+++.. +
T Consensus 159 ~~~l~g~tvgIIG~G~I-G~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~ 237 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRI-GYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKG 237 (364)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTT
T ss_pred cccCCCCEEEEECcCHH-HHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHH
Confidence 46899999999999996 99999999999997 99987642 36778899999999999853 4
Q ss_pred cccC---CCcCCCeEEEEeeecCC
Q 017438 294 MVRG---SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 294 ~v~~---d~ik~gavVIDvgin~~ 314 (371)
++.. +.+|+|+++||++-...
T Consensus 238 li~~~~l~~mk~ga~lIn~arG~~ 261 (364)
T 2j6i_A 238 LINKELLSKFKKGAWLVNTARGAI 261 (364)
T ss_dssp CBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HhCHHHHhhCCCCCEEEECCCCch
Confidence 5654 45799999999996543
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.4e-06 Score=80.85 Aligned_cols=79 Identities=22% Similarity=0.236 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------CHHhhccCCcEEEEccCCC----CcccC--
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------NPEEITRQADIIISAVGQP----NMVRG-- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------~l~~~l~~ADIVIsAvG~p----~~v~~-- 297 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++.. ++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~ 220 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRI-GRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDF 220 (331)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHH
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHH
Confidence 4689999999999996 99999999999999999976532 5778899999999988742 45643
Q ss_pred -CCcCCCeEEEEeeecC
Q 017438 298 -SWIKPGAVIIDVGINP 313 (371)
Q Consensus 298 -d~ik~gavVIDvgin~ 313 (371)
+.+|+|+++||++...
T Consensus 221 l~~mk~ga~lin~srg~ 237 (331)
T 1xdw_A 221 LKKMKDGAILVNCARGQ 237 (331)
T ss_dssp HHTSCTTEEEEECSCGG
T ss_pred HhhCCCCcEEEECCCcc
Confidence 3469999999999543
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.00 E-value=6e-06 Score=79.94 Aligned_cols=132 Identities=21% Similarity=0.261 Sum_probs=88.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------CCHHhhccCCcEEEEccCCC----CcccC---CC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------KNPEEITRQADIIISAVGQP----NMVRG---SW 299 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------~~l~~~l~~ADIVIsAvG~p----~~v~~---d~ 299 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++. .++++.+++||+|+.+++.. ++++. +.
T Consensus 140 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~ 218 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRI-GQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFA 218 (311)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTT
T ss_pred cCCCCCEEEEEEECHH-HHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhh
Confidence 4789999999999996 9999999999999999998754 35788999999999998742 34543 35
Q ss_pred cCCCeEEEEeeecCCCCCC----CCCCceeec---ccch--------hhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 300 IKPGAVIIDVGINPVEDAK----SPRGYRLVG---DVCY--------EEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 300 ik~gavVIDvgin~~~~~~----~~~g~kl~G---DVd~--------~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
+|+|+++||++.....+.. .-+| ++-| ||-. +-.....-.+||-.+|.-.-+..-+....++..
T Consensus 219 mk~ga~lin~srg~~vd~~aL~~aL~g-~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl 297 (311)
T 2cuk_A 219 MKRGAILLNTARGALVDTEALVEALRG-HLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENL 297 (311)
T ss_dssp SCTTCEEEECSCGGGBCHHHHHHHHTT-TSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCCccCHHHHHHHHhC-cCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHH
Confidence 7999999999965432200 0001 1211 3311 111122456889888877665555555555544
Q ss_pred HHH
Q 017438 365 KRV 367 (371)
Q Consensus 365 ~~~ 367 (371)
+++
T Consensus 298 ~~~ 300 (311)
T 2cuk_A 298 LAV 300 (311)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=7.3e-06 Score=84.46 Aligned_cols=91 Identities=23% Similarity=0.332 Sum_probs=72.3
Q ss_pred HHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEE
Q 017438 222 PKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIIS 287 (371)
Q Consensus 222 a~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIs 287 (371)
...++.-+++ .+..+.||+|+|+|.|.+ |+.+++.|...|++|+++++.. .++.+.++++|+||.
T Consensus 257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~I-G~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~ 335 (494)
T 3ce6_A 257 RHSLIDGINRGTDALIGGKKVLICGYGDV-GKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVT 335 (494)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEE
T ss_pred hhhhhHHHHhccCCCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEE
Confidence 3334444433 355789999999999885 9999999999999999998652 246677889999999
Q ss_pred ccCCCCcccC---CCcCCCeEEEEeeecC
Q 017438 288 AVGQPNMVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 288 AvG~p~~v~~---d~ik~gavVIDvgin~ 313 (371)
++|.++++.. +.+|+|++++|+|...
T Consensus 336 atgt~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 336 ATGNKDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp CSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred CCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 9999888864 4579999999999643
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.00 E-value=6.7e-06 Score=79.58 Aligned_cols=133 Identities=17% Similarity=0.191 Sum_probs=88.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CHHhhccCCcEEEEccCC----CCccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NPEEITRQADIIISAVGQ----PNMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l~~~l~~ADIVIsAvG~----p~~v~ 296 (371)
+.++.||++.|||.|.+ |+++|..|...|++|++++++.. ++.+.+++||+|+.+++. .+++.
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~ 215 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRI-GTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIID 215 (313)
T ss_dssp CCCCTTCEEEEESCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBC
T ss_pred CCCCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhC
Confidence 45899999999999996 99999999999999999987532 567888999999999983 23564
Q ss_pred CC---CcCCCeEEEEeeecCCCCCC--C---CCCceeec---cc-------ch---hhhhhhcceeccCCCCccHHHHHH
Q 017438 297 GS---WIKPGAVIIDVGINPVEDAK--S---PRGYRLVG---DV-------CY---EEACEVASAITPVPGGVGPMTIAM 355 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~~~~~~--~---~~g~kl~G---DV-------d~---~~v~~~a~~iTPVPGGVGp~T~am 355 (371)
.+ .+|+|+++||++.....+.. . ..| ++-| || +. +-.....-.+||-.+|.-.-+..-
T Consensus 216 ~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~ 294 (313)
T 2ekl_A 216 YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG-KVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKR 294 (313)
T ss_dssp HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT-CEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC-CCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHH
Confidence 43 46999999999975432200 0 001 2321 33 11 111122346899888877665544
Q ss_pred HHHHHHHHHHHH
Q 017438 356 LLSNTLTSAKRV 367 (371)
Q Consensus 356 Ll~n~v~a~~~~ 367 (371)
+....++..+++
T Consensus 295 ~~~~~~~n~~~~ 306 (313)
T 2ekl_A 295 VAEMTTQNLLNA 306 (313)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=7.4e-06 Score=81.05 Aligned_cols=78 Identities=32% Similarity=0.526 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+.|++|+|+|.|.+ |+.++..+...|++|++++++.. ++.+.++++|+||.+++.|.
T Consensus 165 ~l~g~~V~ViG~G~i-G~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 165 GVEPADVVVIGAGTA-GYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp TBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 578999999999775 99999999999999999986521 23456678999999998653
Q ss_pred -----cccC---CCcCCCeEEEEeeecC
Q 017438 294 -----MVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 294 -----~v~~---d~ik~gavVIDvgin~ 313 (371)
++.. +.+++|.++||+|+.+
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va~~~ 271 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIAIDQ 271 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred CCCcceecHHHHhcCCCCcEEEEEecCC
Confidence 3443 3568999999999764
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.97 E-value=7.3e-06 Score=79.11 Aligned_cols=133 Identities=17% Similarity=0.227 Sum_probs=90.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CHHhhccCCcEEEEccCC-C---CcccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NPEEITRQADIIISAVGQ-P---NMVRG 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l~~~l~~ADIVIsAvG~-p---~~v~~ 297 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++.. ++++.+++||+|+.+++. + +++..
T Consensus 138 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 216 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRI-GYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINE 216 (307)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred cccCCceEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCH
Confidence 5799999999999996 99999999999999999987542 567888999999999883 2 35654
Q ss_pred C---CcCCCeEEEEeeecCCCCCCC-----CCCceee---cccch--------hhhhhhcceeccCCCCccHHHHHHHHH
Q 017438 298 S---WIKPGAVIIDVGINPVEDAKS-----PRGYRLV---GDVCY--------EEACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 298 d---~ik~gavVIDvgin~~~~~~~-----~~g~kl~---GDVd~--------~~v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
+ .+|+|+++||++.....+... ..| ++- -||-. +-.....-.+||-.+|.-.-+..-+..
T Consensus 217 ~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~ 295 (307)
T 1wwk_A 217 ERLKLMKKTAILINTSRGPVVDTNALVKALKEG-WIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGV 295 (307)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT-SSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHH
T ss_pred HHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC-CCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHH
Confidence 3 469999999999764322000 000 121 13311 111222456899889887766655666
Q ss_pred HHHHHHHHHh
Q 017438 359 NTLTSAKRVH 368 (371)
Q Consensus 359 n~v~a~~~~~ 368 (371)
..++..++++
T Consensus 296 ~~~~nl~~~~ 305 (307)
T 1wwk_A 296 EVAEKVVKIL 305 (307)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555543
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.6e-06 Score=81.20 Aligned_cols=134 Identities=17% Similarity=0.182 Sum_probs=90.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+.+++. + +++
T Consensus 155 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKI-GQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 45789999999999996 9999999999999999987641 3788999999999999873 2 356
Q ss_pred cC---CCcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccch--------hhhhhhcceeccCCCCccHHHHHHH
Q 017438 296 RG---SWIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCY--------EEACEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~---d~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~--------~~v~~~a~~iTPVPGGVGp~T~amL 356 (371)
.. +.+|+|+++||++-....+... ..| ++-| ||-. .-..-..-.+||=-||.-.-+...+
T Consensus 234 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g-~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~ 312 (352)
T 3gg9_A 234 TVADLTRMKPTALFVNTSRAELVEENGMVTALNRG-RPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMY 312 (352)
T ss_dssp CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHT-SSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHH
T ss_pred CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhC-CccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHH
Confidence 54 3569999999999433211000 000 1111 2211 0111123468888888887776666
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
...+++..++|+
T Consensus 313 ~~~~~~ni~~~~ 324 (352)
T 3gg9_A 313 FGIAFQNILDIL 324 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=97.94 E-value=7.3e-06 Score=80.05 Aligned_cols=81 Identities=23% Similarity=0.345 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------CHHhhccCCcEEEEccCCC----CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------NPEEITRQADIIISAVGQP----NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------~l~~~l~~ADIVIsAvG~p----~~v~~d 298 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|++++++.. ++.+.+++||+|+.+++.. +++..+
T Consensus 140 ~~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~ 218 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEA 218 (333)
T ss_dssp CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHH
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHH
Confidence 35789999999999996 99999999999999999876532 5778899999999998842 356543
Q ss_pred ---CcCCCeEEEEeeecCC
Q 017438 299 ---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 ---~ik~gavVIDvgin~~ 314 (371)
.+|+|+++||++....
T Consensus 219 ~l~~mk~ga~lIn~srg~~ 237 (333)
T 1dxy_A 219 AFNLMKPGAIVINTARPNL 237 (333)
T ss_dssp HHHHSCTTEEEEECSCTTS
T ss_pred HHhhCCCCcEEEECCCCcc
Confidence 4699999999997653
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=2.2e-05 Score=77.22 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=88.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++. .++.+.+++||+|+.+++-. +++.
T Consensus 164 ~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred cCCCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence 4799999999999996 9999999999999999988652 25778899999999998742 3564
Q ss_pred C---CCcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccchh--------hhhh-hcceeccCCCCccHHHHHHH
Q 017438 297 G---SWIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCYE--------EACE-VASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~~--------~v~~-~a~~iTPVPGGVGp~T~amL 356 (371)
. +.+|+|+++||++.....+... ..| ++-| ||-.. .... ..-.+||=-+|...-+..-+
T Consensus 243 ~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~ 321 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG-RIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEM 321 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT-SEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC-CCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHH
Confidence 4 3579999999999765422000 001 2221 22210 0111 13457887788776666656
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
....++..++|+
T Consensus 322 ~~~~~~ni~~~~ 333 (347)
T 1mx3_A 322 REEAAREIRRAI 333 (347)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 655555555443
|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=77.10 Aligned_cols=74 Identities=20% Similarity=0.337 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCCC-------------------CHHhhccCCcEEEEccCCCC-c
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRTK-------------------NPEEITRQADIIISAVGQPN-M 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t~-------------------~l~~~l~~ADIVIsAvG~p~-~ 294 (371)
..+++.|||.|.. |+..+..|.. .+ .+|++++++ + ++++.+++|||||++|+... +
T Consensus 120 ~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pv 197 (313)
T 3hdj_A 120 RSSVLGLFGAGTQ-GAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPL 197 (313)
T ss_dssp TCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCS
T ss_pred CCcEEEEECccHH-HHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCcc
Confidence 5789999999996 9999888875 33 589999886 2 34556778999999999654 4
Q ss_pred ccCCCcCCCeEEEEeeec
Q 017438 295 VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v~~d~ik~gavVIDvgin 312 (371)
++.+|++||++|+|+|..
T Consensus 198 l~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 198 FAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp SCGGGCCTTCEEEECCCS
T ss_pred cCHHHcCCCcEEEECCCC
Confidence 788999999999999975
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.2e-05 Score=78.80 Aligned_cols=80 Identities=24% Similarity=0.398 Sum_probs=65.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCCC----CcccCC-
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQP----NMVRGS- 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~p----~~v~~d- 298 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|++++++. .++.+.+++||+|+.+++.. +++..+
T Consensus 159 ~~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~ 237 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRI-GLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREV 237 (333)
T ss_dssp CCCCTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHH
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHH
Confidence 35799999999999986 9999999999999999997653 36778899999999999842 355433
Q ss_pred --CcCCCeEEEEeeecC
Q 017438 299 --WIKPGAVIIDVGINP 313 (371)
Q Consensus 299 --~ik~gavVIDvgin~ 313 (371)
.+|+|+++||++--.
T Consensus 238 l~~mk~gailIn~srG~ 254 (333)
T 3ba1_A 238 IDALGPKGVLINIGRGP 254 (333)
T ss_dssp HHHHCTTCEEEECSCGG
T ss_pred HhcCCCCCEEEECCCCc
Confidence 468999999998654
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=97.89 E-value=1.7e-05 Score=77.87 Aligned_cols=133 Identities=22% Similarity=0.244 Sum_probs=88.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCCCC--------------CHHhhccCCcEEEEccCCC----C
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSRTK--------------NPEEITRQADIIISAVGQP----N 293 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~t~--------------~l~~~l~~ADIVIsAvG~p----~ 293 (371)
+.++.||++.|||.|.+ |+.+|..|. ..|++|++++++.. ++.+.+++||+|+.+++.. +
T Consensus 158 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~ 236 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAI-QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHH 236 (348)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTT
T ss_pred CcCCCCCEEEEEEECHH-HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHH
Confidence 56899999999999986 999999999 99999999986532 5667789999999999842 3
Q ss_pred cccC---CCcCCCeEEEEeeecCCCCCC-----CCCCceeec---ccchhh------hhh-hcceeccCCCCccHHHHHH
Q 017438 294 MVRG---SWIKPGAVIIDVGINPVEDAK-----SPRGYRLVG---DVCYEE------ACE-VASAITPVPGGVGPMTIAM 355 (371)
Q Consensus 294 ~v~~---d~ik~gavVIDvgin~~~~~~-----~~~g~kl~G---DVd~~~------v~~-~a~~iTPVPGGVGp~T~am 355 (371)
++.. +.+|+|+++||++.....+.. -..| ++.| ||-..+ ..+ ..-.+||-.||.-.-+..-
T Consensus 237 li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~-~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~ 315 (348)
T 2w2k_A 237 LIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSG-KLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHE 315 (348)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT-SEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHH
T ss_pred HhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC-CceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHH
Confidence 5543 346999999999865432100 0011 3322 442111 111 1345788888877666555
Q ss_pred HHHHHHHHHHHH
Q 017438 356 LLSNTLTSAKRV 367 (371)
Q Consensus 356 Ll~n~v~a~~~~ 367 (371)
+...+++..+++
T Consensus 316 ~~~~~~~ni~~~ 327 (348)
T 2w2k_A 316 FERLTMTNIDRF 327 (348)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555444444444
|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=6.4e-05 Score=77.65 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=89.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+++.. +++.
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~ 215 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID 215 (529)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred ccccCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhC
Confidence 45799999999999996 9999999999999999997653 15667889999999999853 3565
Q ss_pred C---CCcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccc-------hhhhhhhcceeccCCCCccHHHHHHHHH
Q 017438 297 G---SWIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVC-------YEEACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd-------~~~v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
. ..+|+|+++||++--...+... ..| ++-| ||- .+-+....-.+||-.||.-+-+..-+..
T Consensus 216 ~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g-~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~ 294 (529)
T 1ygy_A 216 KEALAKTKPGVIIVNAARGGLVDEAALADAITGG-HVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGT 294 (529)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS-SEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcC-CccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHH
Confidence 4 4679999999999533211000 001 1211 221 0111112335899999988777665555
Q ss_pred HHHHHHHHHh
Q 017438 359 NTLTSAKRVH 368 (371)
Q Consensus 359 n~v~a~~~~~ 368 (371)
..++....++
T Consensus 295 ~~~~~l~~~l 304 (529)
T 1ygy_A 295 DVAESVRLAL 304 (529)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555554444
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=9.9e-06 Score=79.04 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------CHHhhccCCcEEEEccCCC----CcccC-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------NPEEITRQADIIISAVGQP----NMVRG- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~l~~~l~~ADIVIsAvG~p----~~v~~- 297 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++.. ++++.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHH
T ss_pred ccCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHH
Confidence 4789999999999996 99999999999999999886532 6778889999999999842 35544
Q ss_pred --CCcCCCeEEEEeeecC
Q 017438 298 --SWIKPGAVIIDVGINP 313 (371)
Q Consensus 298 --d~ik~gavVIDvgin~ 313 (371)
+.+|+|+++||++...
T Consensus 221 ~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 221 SIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHSCTTEEEEECSCGG
T ss_pred HHhhCCCCcEEEECCCCc
Confidence 3469999999999654
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=97.87 E-value=3.3e-05 Score=77.42 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC-C---Cc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ-P---NM 294 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~-p---~~ 294 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+.+++. | ++
T Consensus 186 ~~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~l 264 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHM 264 (393)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHH
Confidence 45799999999999996 9999999999999999987652 3577889999999999883 2 45
Q ss_pred ccC---CCcCCCeEEEEeeecC
Q 017438 295 VRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 295 v~~---d~ik~gavVIDvgin~ 313 (371)
+.. +.+|+|+++||++-..
T Consensus 265 i~~~~l~~mk~gailIN~aRG~ 286 (393)
T 2nac_A 265 INDETLKLFKRGAYIVNTARGK 286 (393)
T ss_dssp BSHHHHTTSCTTEEEEECSCGG
T ss_pred hhHHHHhhCCCCCEEEECCCch
Confidence 643 4579999999999654
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.84 E-value=3.2e-05 Score=75.12 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccCCC----Cccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
.++.|+++.|||.|.+ |+++|..|...|++|++++++.. ++.+.++++|+||.+++.. +++.
T Consensus 151 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~ 229 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRI-GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCN 229 (330)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence 4689999999999886 99999999999999999986532 5667789999999999843 3454
Q ss_pred C---CCcCCCeEEEEeeecC
Q 017438 297 G---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~ 313 (371)
. +.+++|+++||++...
T Consensus 230 ~~~~~~mk~gailIn~srg~ 249 (330)
T 2gcg_A 230 KDFFQKMKETAVFINISRGD 249 (330)
T ss_dssp HHHHHHSCTTCEEEECSCGG
T ss_pred HHHHhcCCCCcEEEECCCCc
Confidence 2 3568999999998653
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.1e-05 Score=76.59 Aligned_cols=133 Identities=21% Similarity=0.265 Sum_probs=87.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.++.|+++.|||.|.+ |+.+|..|...|++|++++++. .++.+.+++||+||.+++.. +++.
T Consensus 145 ~~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRI-GQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred ccCCCCCEEEEEccCHH-HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhC
Confidence 35789999999999886 9999999999999999998753 25667789999999999843 3454
Q ss_pred C---CCcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccch-------hhhhhhcceeccCCCCccHHHHHHHHH
Q 017438 297 G---SWIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCY-------EEACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~-------~~v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
. +.+++|+++||++.-...+... ..| ++-| ||-. +-.....-.+||-.||.-.-+..-+..
T Consensus 224 ~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~-~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~ 302 (334)
T 2dbq_A 224 EERLKLMKKTAILINIARGKVVDTNALVKALKEG-WIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAE 302 (334)
T ss_dssp HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT-SSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC-CeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHH
Confidence 3 3578999999998543321000 001 2222 3311 111112345788888877666555555
Q ss_pred HHHHHHHHH
Q 017438 359 NTLTSAKRV 367 (371)
Q Consensus 359 n~v~a~~~~ 367 (371)
.+++..+++
T Consensus 303 ~~~~n~~~~ 311 (334)
T 2dbq_A 303 LVAKNLIAF 311 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555554444
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.4e-05 Score=74.24 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccC-CC-eEEEEeCCC-----------------CCHHhhccCCcEEEEccCCCC-c
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQRE-DA-TVSIVHSRT-----------------KNPEEITRQADIIISAVGQPN-M 294 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~-gA-tVtv~h~~t-----------------~~l~~~l~~ADIVIsAvG~p~-~ 294 (371)
...++++.|||.|.+ |+.++..|... |. +|++++++. .++++.++++|+||++++... +
T Consensus 132 ~~~~~~igiIG~G~~-g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v 210 (312)
T 2i99_A 132 PPSSEVLCILGAGVQ-AYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPI 210 (312)
T ss_dssp CTTCCEEEEECCSHH-HHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCC
T ss_pred CCCCcEEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcc
Confidence 567899999999986 99999988765 75 899998751 356678899999999998533 4
Q ss_pred ccCCCcCCCeEEEEeeec
Q 017438 295 VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v~~d~ik~gavVIDvgin 312 (371)
+..+|+++|.+|+|+|..
T Consensus 211 ~~~~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 211 LFGEWVKPGAHINAVGAS 228 (312)
T ss_dssp BCGGGSCTTCEEEECCCC
T ss_pred cCHHHcCCCcEEEeCCCC
Confidence 666899999999999744
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=2.1e-05 Score=78.90 Aligned_cols=81 Identities=22% Similarity=0.420 Sum_probs=67.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCCC----CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQP----NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~p----~~v~~d 298 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++++.+++||+|+..++.. +++..+
T Consensus 140 ~~el~gktlGiIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 218 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK 218 (404)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred ccccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHH
Confidence 46899999999999996 9999999999999999997642 36888999999999998842 356543
Q ss_pred ---CcCCCeEEEEeeecCC
Q 017438 299 ---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 ---~ik~gavVIDvgin~~ 314 (371)
.+|+|+++||++--..
T Consensus 219 ~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGTV 237 (404)
T ss_dssp HHHHSCTTEEEEECSCSSS
T ss_pred HHhhcCCCeEEEECCCChH
Confidence 4699999999996543
|
| >1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=5.9e-05 Score=74.19 Aligned_cols=87 Identities=14% Similarity=0.229 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC---------------------CCHHhhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT---------------------KNPEEIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t---------------------~~l~~~l 279 (371)
.+.+.... . ....++++.|||.|.. |+..+..|.. .+ .+|++++++. .++++.+
T Consensus 116 ~s~laa~~-l-a~~~~~~v~iIGaG~~-a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav 192 (350)
T 1x7d_A 116 TSLMAAQA-L-ARPNARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAV 192 (350)
T ss_dssp HHHHHHHH-H-SCTTCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHH
T ss_pred HHHHHHHH-h-ccccCCeEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHH
Confidence 44444442 2 2357899999999996 9998876643 34 5899998751 3466788
Q ss_pred cCCcEEEEccCCC---CcccCCCcCCCeEEEEeeec
Q 017438 280 RQADIIISAVGQP---NMVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ~~ADIVIsAvG~p---~~v~~d~ik~gavVIDvgin 312 (371)
++|||||++|+.+ .++..+|+++|.+|+|+|..
T Consensus 193 ~~aDiVi~aTps~~~~pvl~~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 193 KGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGD 228 (350)
T ss_dssp TTCSEEEECCCCSSEEEEECGGGCCTTCEEEECSCC
T ss_pred hcCCEEEEeccCCCCCceecHHHcCCCCEEEECCCC
Confidence 9999999999975 25788999999999999964
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.2e-05 Score=75.39 Aligned_cols=131 Identities=19% Similarity=0.273 Sum_probs=85.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CHHhhccCCcEEEEccCCC----CcccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NPEEITRQADIIISAVGQP----NMVRG 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l~~~l~~ADIVIsAvG~p----~~v~~ 297 (371)
.++.||++.|||.|.+ |+.+|..|...|++|++++++.. ++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAI-GKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp CCSTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred CCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 5799999999999986 99999999999999999886532 5667789999999999854 34553
Q ss_pred ---CCcCCCeEEEEeeecCCCCCCC-----CCCcee---ecccchh------hhhhh--cceeccCCCCccHHHHHHHHH
Q 017438 298 ---SWIKPGAVIIDVGINPVEDAKS-----PRGYRL---VGDVCYE------EACEV--ASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 298 ---d~ik~gavVIDvgin~~~~~~~-----~~g~kl---~GDVd~~------~v~~~--a~~iTPVPGGVGp~T~amLl~ 358 (371)
+.+++| ++||++-....+... ..| ++ --||--. ...+. .-.+||-.+|.-.-+..-+..
T Consensus 221 ~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~-~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~ 298 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQG-KLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGF 298 (333)
T ss_dssp HHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTT-CBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHH
T ss_pred HHHhhCCCC-EEEECCCCcccCHHHHHHHHHcC-CceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHH
Confidence 356899 999998544321000 001 11 1133110 01112 245788888877666555555
Q ss_pred HHHHHHHHH
Q 017438 359 NTLTSAKRV 367 (371)
Q Consensus 359 n~v~a~~~~ 367 (371)
.+++..+++
T Consensus 299 ~~~~n~~~~ 307 (333)
T 2d0i_A 299 RAVENLLKV 307 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555444444
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=97.75 E-value=6e-05 Score=73.05 Aligned_cols=74 Identities=20% Similarity=0.333 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCCC-
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPN- 293 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p~- 293 (371)
...+++.|||.|.+ |+..+..|.. .+ ..|++++++. .++++.+ ++||||++|+...
T Consensus 123 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~p 200 (322)
T 1omo_A 123 KNSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKP 200 (322)
T ss_dssp TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSC
T ss_pred CCCCEEEEEcCcHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCc
Confidence 46889999999986 9999888876 33 5899998762 2456777 9999999998654
Q ss_pred cccCCCcCCCeEEEEeee
Q 017438 294 MVRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgi 311 (371)
+++.+|+++|.+|+|+|.
T Consensus 201 v~~~~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 201 VVKAEWVEEGTHINAIGA 218 (322)
T ss_dssp CBCGGGCCTTCEEEECSC
T ss_pred eecHHHcCCCeEEEECCC
Confidence 467899999999999973
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.73 E-value=1.5e-05 Score=78.33 Aligned_cols=78 Identities=33% Similarity=0.492 Sum_probs=58.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
.++|++|+|+|+|+ +|+.++..|...|++|++++++.. ++.+.++++|+||.++|.+.
T Consensus 163 ~l~~~~V~ViGaG~-iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 163 GVAPASVVILGGGT-VGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp BBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 47899999999976 599999999999999999987521 23355678999999998653
Q ss_pred -----cccC---CCcCCCeEEEEeeecC
Q 017438 294 -----MVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 294 -----~v~~---d~ik~gavVIDvgin~ 313 (371)
++.. +.+++|.++||+++..
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~~ 269 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVDQ 269 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC---
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecCC
Confidence 3443 3468999999999753
|
| >3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0003 Score=71.88 Aligned_cols=186 Identities=20% Similarity=0.278 Sum_probs=134.1
Q ss_pred CceEEEEEeCCC--------c-chHHHHHHHHHHHHHc-CCeEEEEeCCCCC-----CHHHHHHHHHHhcCCCCccEEEE
Q 017438 110 VPGLAVILVGDR--------K-DSATYVRNKKKACQSV-GINSFEVHLPEDT-----SEQEVLKHISVFNDDPSVHGILV 174 (371)
Q Consensus 110 ~P~LaiI~vG~d--------~-aS~~Yv~~k~k~~~~~-GI~~~~~~lp~~v-----~~~el~~~I~~LN~D~~V~GIlV 174 (371)
...++||-=|+. + ++.--...|.-.++.+ ||++.-++|+... +.+++.+.++.+- |.+-||++
T Consensus 90 gn~VaVVTDG~aILGLGDiG~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~--P~fG~Inl 167 (487)
T 3nv9_A 90 GNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ--HTFGAINL 167 (487)
T ss_dssp GGEEEEEECSSSBGGGBCCCGGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG--GGCSEEEE
T ss_pred CCEEEEEEcCceeeeccccccccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC--CCCCeecH
Confidence 356777665543 2 4566677898888886 7999999996431 4789999999886 67778765
Q ss_pred eCCCCCCCC---HHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccH
Q 017438 175 QLPLPCHID---EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVG 251 (371)
Q Consensus 175 qlPLp~~i~---~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VG 251 (371)
. .+. --++++....+-|+.-||. +..+-.-+|-.|++..|+-.+.+++..++|+.|+|.+ |
T Consensus 168 E-----Df~ap~af~il~ryr~~~~ipvFnD----------D~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaA-G 231 (487)
T 3nv9_A 168 E-----DISQPNCYKILDVLRESCDIPVWHD----------DQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSS-N 231 (487)
T ss_dssp C-----SCCTTHHHHHHHHHHHHCSSCEEET----------TTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHH-H
T ss_pred h-----hcCCchHHHHHHHHHhhccCCcccc----------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-H
Confidence 3 232 2334444432224444442 2333334556789999999999999999999999887 9
Q ss_pred HHHHHHhccCCC---eEEEEeCC------------------------------CCCHHhhccCCcEEEEccCC-CCcccC
Q 017438 252 MPAALLLQREDA---TVSIVHSR------------------------------TKNPEEITRQADIIISAVGQ-PNMVRG 297 (371)
Q Consensus 252 kpla~lL~~~gA---tVtv~h~~------------------------------t~~l~~~l~~ADIVIsAvG~-p~~v~~ 297 (371)
..++.+|...|. .+++|+++ ..+|.+.++.+|++|...+. |+.+++
T Consensus 232 igia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~ 311 (487)
T 3nv9_A 232 TTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKA 311 (487)
T ss_dssp HHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCH
T ss_pred HHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCH
Confidence 999999999998 79999764 12467888999999977633 899999
Q ss_pred CCcC---CCeEEEEeeecCC
Q 017438 298 SWIK---PGAVIIDVGINPV 314 (371)
Q Consensus 298 d~ik---~gavVIDvgin~~ 314 (371)
|||+ +.-+|+-+. ||.
T Consensus 312 e~V~~Ma~~PIIFaLS-NPt 330 (487)
T 3nv9_A 312 EWIKSMGEKPIVFCCA-NPV 330 (487)
T ss_dssp HHHHTSCSSCEEEECC-SSS
T ss_pred HHHHhhcCCCEEEECC-CCC
Confidence 9885 477888887 654
|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.65 E-value=4.3e-05 Score=74.75 Aligned_cols=80 Identities=19% Similarity=0.227 Sum_probs=66.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccC-CC---CcccC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADIIISAVG-QP---NMVRG 297 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG-~p---~~v~~ 297 (371)
+.++.||++.|||.|.+ |+.+|..+...|++|..+++.. .++.+.+++||||+..++ .+ ++|+.
T Consensus 136 ~~~l~g~tvGIiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~ 214 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred cceecCcEEEEECcchH-HHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCH
Confidence 35789999999999996 9999999999999999887653 367889999999998887 23 46776
Q ss_pred CC---cCCCeEEEEeeecC
Q 017438 298 SW---IKPGAVIIDVGINP 313 (371)
Q Consensus 298 d~---ik~gavVIDvgin~ 313 (371)
+. +|+|+++|+++--.
T Consensus 215 ~~l~~mk~~a~lIN~aRG~ 233 (334)
T 3kb6_A 215 ERISLMKDGVYLINTARGK 233 (334)
T ss_dssp HHHHHSCTTEEEEECSCGG
T ss_pred HHHhhcCCCeEEEecCccc
Confidence 54 59999999998544
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.61 E-value=1.6e-05 Score=73.45 Aligned_cols=80 Identities=18% Similarity=0.328 Sum_probs=56.6
Q ss_pred HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-----------------------------HHhhc
Q 017438 229 LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-----------------------------PEEIT 279 (371)
Q Consensus 229 L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-----------------------------l~~~l 279 (371)
.++...++.+++|.|||.|.+ |.+++..|.+.|.+|++++++... +.+.+
T Consensus 10 ~~~~~~~~~~~kIgiIG~G~m-G~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 88 (245)
T 3dtt_A 10 HHHENLYFQGMKIAVLGTGTV-GRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVA 88 (245)
T ss_dssp ---------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHH
T ss_pred ccccccccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHH
Confidence 345567889999999999886 999999999999999999876322 23456
Q ss_pred cCCcEEEEccCCCCc---cc---CCCcCCCeEEEEee
Q 017438 280 RQADIIISAVGQPNM---VR---GSWIKPGAVIIDVG 310 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~---v~---~d~ik~gavVIDvg 310 (371)
++||+||.+++.... +. ...+ +|.+|||++
T Consensus 89 ~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 89 AGAELVVNATEGASSIAALTAAGAENL-AGKILVDIA 124 (245)
T ss_dssp HHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred hcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence 789999999986542 21 2234 799999998
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.58 E-value=5.6e-05 Score=72.60 Aligned_cols=76 Identities=18% Similarity=0.375 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----ccC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----VRG 297 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v~~ 297 (371)
.+.++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.++++|+||.+++.+.. +..
T Consensus 29 ~~~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 29 PYARKITFLGTGSM-GLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp CCCSEEEEECCTTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred cCCCEEEEECccHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 45679999999886 9999999999999999998762 4677888999999999986532 221
Q ss_pred ----CCcCCCeEEEEeeec
Q 017438 298 ----SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 ----d~ik~gavVIDvgin 312 (371)
+.+++|.+|||++..
T Consensus 108 ~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp TCHHHHCCTTCEEEECSCC
T ss_pred hhHHhhCCCCCEEEecCCC
Confidence 246889999999864
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.56 E-value=3.8e-05 Score=72.20 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=58.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-c-C-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-R-G- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~-~- 297 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.++++|+||.+++.+.. + . .
T Consensus 2 ~~i~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGLGIM-GSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEeecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 68999999885 9999999999999999998763 3667788899999999986532 2 1 1
Q ss_pred --CCcCCCeEEEEeeec
Q 017438 298 --SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 --d~ik~gavVIDvgin 312 (371)
+.+++|.+|||++..
T Consensus 81 l~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 81 VLEGIGEGRGYVDMSTV 97 (287)
T ss_dssp HHHHCCTTCEEEECSCC
T ss_pred HhhcCCCCCEEEeCCCC
Confidence 246889999999753
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=69.96 Aligned_cols=72 Identities=26% Similarity=0.307 Sum_probs=58.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCccc------CC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMVR------GS 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v~------~d 298 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++..+ +|+||.+++.+..+. .+
T Consensus 16 ~~I~vIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 16 LKLGYIGLGNM-GAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp CCEEEECCSTT-HHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence 68999999885 9999999999999999998763 35667778 999999998653221 24
Q ss_pred CcCCCeEEEEeeec
Q 017438 299 WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 ~ik~gavVIDvgin 312 (371)
.+++|.+|||.+..
T Consensus 94 ~l~~g~ivv~~st~ 107 (296)
T 3qha_A 94 HAKPGTVIAIHSTI 107 (296)
T ss_dssp TCCTTCEEEECSCC
T ss_pred hcCCCCEEEEeCCC
Confidence 67899999998854
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00012 Score=70.28 Aligned_cols=73 Identities=19% Similarity=0.373 Sum_probs=59.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-cC--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-RG-- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~~-- 297 (371)
|+|-+||-|.+ |.|+|..|++.|.+|++++++. .++.+..+++|+||+.++.+.- + ..
T Consensus 4 ~kIgfIGlG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g 82 (300)
T 3obb_A 4 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (300)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSS
T ss_pred CEEEEeeehHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhh
Confidence 68999999996 9999999999999999999873 4677889999999999986542 2 22
Q ss_pred --CCcCCCeEEEEeeec
Q 017438 298 --SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 --d~ik~gavVIDvgin 312 (371)
+.+++|.++||.++.
T Consensus 83 ~~~~~~~g~iiId~sT~ 99 (300)
T 3obb_A 83 LLAHIAPGTLVLECSTI 99 (300)
T ss_dssp STTSCCC-CEEEECSCC
T ss_pred hhhcCCCCCEEEECCCC
Confidence 246889999999865
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.49 E-value=5.9e-05 Score=72.06 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-c-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-R- 296 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~- 296 (371)
+-++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.|.. + .
T Consensus 20 ~m~~I~iIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 20 HMMEVGFLGLGIM-GKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CSCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred cCCEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 4578999999885 9999999999999999998763 4667788899999999987632 2 1
Q ss_pred C---CCcCCCeEEEEeeec
Q 017438 297 G---SWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin 312 (371)
. +.+++|.+|||++..
T Consensus 99 ~~l~~~l~~g~~vv~~st~ 117 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMSTV 117 (310)
T ss_dssp TCGGGGCCTTCEEEECSCC
T ss_pred hhhhhccCCCCEEEECCCC
Confidence 1 356889999999854
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=9.9e-05 Score=73.21 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=57.6
Q ss_pred cCCHHHHH----HHHHH-hCC-CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH--------------hh
Q 017438 219 PCTPKGCI----ELLHR-YGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------------EI 278 (371)
Q Consensus 219 PcTa~gvi----~lL~~-~~i-~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--------------~~ 278 (371)
+.|+.|+. +++++ .+. +++||+|+|+|.|++ |..+|..|.+.|++|++++++...++ +.
T Consensus 148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~V-G~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~l 226 (364)
T 1leh_A 148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNV-AKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI 226 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred cchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHH
Confidence 46777654 44555 476 899999999999985 99999999999999998876532222 22
Q ss_pred c-cCCcEEEEccCCCCcccCCCc
Q 017438 279 T-RQADIIISAVGQPNMVRGSWI 300 (371)
Q Consensus 279 l-~~ADIVIsAvG~p~~v~~d~i 300 (371)
+ .++||+|.+. ..+.|+.+.+
T Consensus 227 l~~~~DIvip~a-~~~~I~~~~~ 248 (364)
T 1leh_A 227 YGVTCDIFAPCA-LGAVLNDFTI 248 (364)
T ss_dssp TTCCCSEEEECS-CSCCBSTTHH
T ss_pred hccCCcEeeccc-hHHHhCHHHH
Confidence 2 3889999774 3346665543
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.41 E-value=5.6e-05 Score=71.00 Aligned_cols=73 Identities=23% Similarity=0.295 Sum_probs=59.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc---c-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV---R- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v---~- 296 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.++++|+||.+++.+. .+ .
T Consensus 2 ~~I~iiG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~ 80 (287)
T 3pdu_A 2 TTYGFLGLGIM-GGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG 80 (287)
T ss_dssp CCEEEECCSTT-HHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CeEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence 47999999885 9999999999999999998763 466778889999999998753 22 1
Q ss_pred -CCCcCCCeEEEEeeec
Q 017438 297 -GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 -~d~ik~gavVIDvgin 312 (371)
.+.+++|.+|||++..
T Consensus 81 l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 81 VLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp GGGTCCTTCEEEECSCC
T ss_pred hhhcccCCCEEEECCCC
Confidence 1356889999999864
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.40 E-value=8.7e-05 Score=70.44 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=59.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------CCCHHhhccCCcEEEEccCCCCc----c---
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------TKNPEEITRQADIIISAVGQPNM----V--- 295 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------t~~l~~~l~~ADIVIsAvG~p~~----v--- 295 (371)
.++|.|||.|.+ |.+++..|.+.|.+|++++++ +.++++.++++|+||.+++.+.. +
T Consensus 7 ~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 7 DFHVGIVGLGSM-GMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCeEEEECCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 468999999885 999999999999999999875 23566778899999999987531 2
Q ss_pred c--CCCcCCCeEEEEeeec
Q 017438 296 R--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~--~d~ik~gavVIDvgin 312 (371)
. .+.+++|.+|||++..
T Consensus 86 ~~l~~~l~~g~ivv~~st~ 104 (303)
T 3g0o_A 86 DGVAHLMKPGSAVMVSSTI 104 (303)
T ss_dssp CCCGGGSCTTCEEEECSCC
T ss_pred hhHHhhCCCCCEEEecCCC
Confidence 1 1356889999999854
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00016 Score=71.27 Aligned_cols=77 Identities=13% Similarity=0.216 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCC---cEEEEccCCCCc---c
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQA---DIIISAVGQPNM---V 295 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~A---DIVIsAvG~p~~---v 295 (371)
+++++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.++++ |+||.+++.+.. +
T Consensus 20 m~~mkIgiIGlG~m-G~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRM-GADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp --CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred hcCCEEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 46789999999885 9999999999999999998762 4677777788 999999986531 1
Q ss_pred c--CCCcCCCeEEEEeeecC
Q 017438 296 R--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 296 ~--~d~ik~gavVIDvgin~ 313 (371)
. ...+++|.+|||++...
T Consensus 99 ~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 99 QRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHGGGCCTTCEEEECSSCC
T ss_pred HHHHhhCCCCCEEEeCCCCC
Confidence 1 23578899999998543
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.38 E-value=8.1e-05 Score=71.06 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCcEEEEccCCCC----ccc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQPN----MVR 296 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~ADIVIsAvG~p~----~v~ 296 (371)
....++|.|||.|.+ |.+++..|.+.|.+|++++++ ..++.+.++++|+||.+++.+. .+.
T Consensus 6 ~~~~~~IgiIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAM-GTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCSCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred ccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 456789999999886 999999999999999999876 2467788899999999998654 232
Q ss_pred CC---CcCCCeEEEEeeec
Q 017438 297 GS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin 312 (371)
.+ .+++|.+|||++..
T Consensus 85 ~~~l~~~~~g~ivid~st~ 103 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTN 103 (306)
T ss_dssp STTHHHHTTTCEEEECCCC
T ss_pred ccchhhccCCCEEEECCCC
Confidence 21 24789999999854
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00016 Score=69.19 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=56.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCcc----cC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMV----RG--- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v----~~--- 297 (371)
+||-+||-|.+ |.|+|..|++.|.+|++++++. .++.+..+++|+||+.++.+..+ ..
T Consensus 6 ~kIgfIGLG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 6 EKIAFLGLGNL-GTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred CcEEEEecHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence 57999999986 9999999999999999998763 35678899999999999865422 11
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
...++|.++||.+..
T Consensus 85 ~~~~~~~iiid~sT~ 99 (297)
T 4gbj_A 85 EKLGKDGVHVSMSTI 99 (297)
T ss_dssp HHHCTTCEEEECSCC
T ss_pred hhcCCCeEEEECCCC
Confidence 235788899998764
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0001 Score=71.72 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------CHHhhccCCcEEEEccCCC---Cccc--
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------NPEEITRQADIIISAVGQP---NMVR-- 296 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------~l~~~l~~ADIVIsAvG~p---~~v~-- 296 (371)
+++++|.|||.|.+ |..++..|.+.|.+|+++.++.. ++.+.+++||+||.+++.. .++.
T Consensus 14 l~~~~I~IIG~G~m-G~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~ 92 (338)
T 1np3_A 14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (338)
T ss_dssp HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred hcCCEEEEECchHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHH
Confidence 46789999999886 99999999999999999887642 3456788999999999843 2333
Q ss_pred -CCCcCCCeEEEEee
Q 017438 297 -GSWIKPGAVIIDVG 310 (371)
Q Consensus 297 -~d~ik~gavVIDvg 310 (371)
...+++|++|+|++
T Consensus 93 i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 93 IEPNLKKGATLAFAH 107 (338)
T ss_dssp TGGGCCTTCEEEESC
T ss_pred HHhhCCCCCEEEEcC
Confidence 24578999999875
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00026 Score=65.70 Aligned_cols=123 Identities=21% Similarity=0.327 Sum_probs=72.6
Q ss_pred HHHHHHHHHh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-C-----------------HHhhccCC
Q 017438 223 KGCIELLHRY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-N-----------------PEEITRQA 282 (371)
Q Consensus 223 ~gvi~lL~~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~-----------------l~~~l~~A 282 (371)
.|-++..++| .++++||+|+|||.|.+ |...+..|++.||.|+|+..... . ..+.+..+
T Consensus 14 ~~~~~~~~~~Pifl~L~gk~VLVVGgG~v-a~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 14 SGHIEGRHMYTVMLDLKGRSVLVVGGGTI-ATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNV 92 (223)
T ss_dssp --------CCEEEECCTTCCEEEECCSHH-HHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSC
T ss_pred cCcccccCccccEEEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCC
Confidence 3455555555 35899999999999885 99999999999999999865421 1 12457889
Q ss_pred cEEEEccCCCCc---ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhh---hhcceeccCCCCccHHHHHHH
Q 017438 283 DIIISAVGQPNM---VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC---EVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 283 DIVIsAvG~p~~---v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~---~~a~~iTPVPGGVGp~T~amL 356 (371)
|+||.||+.+.. |... -+.| +.|++.-+|.. +|+-|.++. +..-+|+ -||-+|..+..|
T Consensus 93 dLVIaAT~d~~~N~~I~~~-ak~g-i~VNvvD~p~~-----------~~f~~Paiv~rg~l~iaIS--T~G~sP~la~~i 157 (223)
T 3dfz_A 93 FFIVVATNDQAVNKFVKQH-IKND-QLVNMASSFSD-----------GNIQIPAQFSRGRLSLAIS--TDGASPLLTKRI 157 (223)
T ss_dssp SEEEECCCCTHHHHHHHHH-SCTT-CEEEC-----C-----------CSEECCEEEEETTEEEEEE--CTTSCHHHHHHH
T ss_pred CEEEECCCCHHHHHHHHHH-HhCC-CEEEEeCCccc-----------CeEEEeeEEEeCCEEEEEE--CCCCCcHHHHHH
Confidence 999999998763 3222 2334 33444433321 222222221 2233444 488999888777
Q ss_pred HHHHH
Q 017438 357 LSNTL 361 (371)
Q Consensus 357 l~n~v 361 (371)
=+.+.
T Consensus 158 R~~ie 162 (223)
T 3dfz_A 158 KEDLS 162 (223)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00021 Score=67.90 Aligned_cols=73 Identities=19% Similarity=0.277 Sum_probs=58.6
Q ss_pred CCEEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC-CHHhhccCCcEEEEccCCCCc---cc--CCCcCCCeEEEEee
Q 017438 238 GKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK-NPEEITRQADIIISAVGQPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 238 GK~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l~~~l~~ADIVIsAvG~p~~---v~--~d~ik~gavVIDvg 310 (371)
.++|.||| .|.+ |..++..|.+.|.+|++++++.. +..+.+++||+||.+++.... +. ...++++++|+|++
T Consensus 21 ~~~I~iIGg~G~m-G~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~~~~ 99 (298)
T 2pv7_A 21 IHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLT 99 (298)
T ss_dssp CCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred CCEEEEEcCCCHH-HHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 46899999 8775 99999999999999999987643 577889999999999985432 21 23578899999986
Q ss_pred e
Q 017438 311 I 311 (371)
Q Consensus 311 i 311 (371)
.
T Consensus 100 s 100 (298)
T 2pv7_A 100 S 100 (298)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00018 Score=69.22 Aligned_cols=72 Identities=19% Similarity=0.141 Sum_probs=58.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-------------------C-CHHhhccCCcEEEEccCCCCccc-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-------------------K-NPEEITRQADIIISAVGQPNMVR- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-------------------~-~l~~~l~~ADIVIsAvG~p~~v~- 296 (371)
++|.|||.|.+ |.+++..|.+.| .+|++++++. . ++.+.+++||+||.+++.+...+
T Consensus 25 m~IgvIG~G~m-G~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEA-AQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHH-HHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHH-HHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999885 999999999999 9999998763 2 56677889999999998654321
Q ss_pred ----CCCcCCCeEEEEeee
Q 017438 297 ----GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 ----~d~ik~gavVIDvgi 311 (371)
.+.+++|.+|||++.
T Consensus 104 ~~~i~~~l~~~~ivv~~st 122 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNS 122 (317)
T ss_dssp HHHHGGGCCTTCEEEECCS
T ss_pred HHHHHhhcCCCCEEEECCC
Confidence 235788999999874
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00018 Score=69.41 Aligned_cols=74 Identities=12% Similarity=0.136 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC----------------CCHHh-hccCCcEEEEccCCCCc---
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------KNPEE-ITRQADIIISAVGQPNM--- 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t----------------~~l~~-~l~~ADIVIsAvG~p~~--- 294 (371)
..++|.|||.|.+ |..++..|.+.|. +|++++++. .++++ .+++||+||.+++....
T Consensus 32 ~~~kI~IIG~G~m-G~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 110 (314)
T 3ggo_A 32 SMQNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 110 (314)
T ss_dssp SCSEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred CCCEEEEEeeCHH-HHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHH
Confidence 3479999999886 9999999999998 999998752 35667 78999999999985332
Q ss_pred cc--CCCcCCCeEEEEeee
Q 017438 295 VR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 295 v~--~d~ik~gavVIDvgi 311 (371)
+. ...++++++|+|++.
T Consensus 111 l~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp HHHHHHHSCTTCEEEECCS
T ss_pred HHHHhhccCCCcEEEECCC
Confidence 21 134789999999984
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.27 E-value=7.6e-05 Score=76.17 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=56.5
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCCC----------------------CHHhhccCCcEEEEc
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTK----------------------NPEEITRQADIIISA 288 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t~----------------------~l~~~l~~ADIVIsA 288 (371)
.+.++++|+|+|+|+|++ |++++..|.+. +++|++++|+.. ++.+.++++|+||++
T Consensus 17 ~~~~l~~k~VlIiGAGgi-G~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFV-AQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp ------CEEEEEECCSTT-HHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred cccCCCCCEEEEECChHH-HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 356788999999999885 99999999988 689999987521 233456789999999
Q ss_pred cCCCC--cccCCCcCCCeEEEEeee
Q 017438 289 VGQPN--MVRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 289 vG~p~--~v~~d~ik~gavVIDvgi 311 (371)
+|... .+....++.|..++|+.+
T Consensus 96 tp~~~~~~v~~a~l~~g~~vvd~~~ 120 (467)
T 2axq_A 96 IPYTFHPNVVKSAIRTKTDVVTSSY 120 (467)
T ss_dssp SCGGGHHHHHHHHHHHTCEEEECSC
T ss_pred CchhhhHHHHHHHHhcCCEEEEeec
Confidence 98531 133445677899999865
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00026 Score=67.79 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=59.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC----------------CCCHHhhccCCcEEEEccCCCCcc---c-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR----------------TKNPEEITRQADIIISAVGQPNMV---R- 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~----------------t~~l~~~l~~ADIVIsAvG~p~~v---~- 296 (371)
.++|.|||.|.+ |.+++..|.+.|. +|++++++ +.++++.++++|+||.+++.+..+ .
T Consensus 24 ~~~I~iIG~G~m-G~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~ 102 (312)
T 3qsg_A 24 AMKLGFIGFGEA-ASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQ 102 (312)
T ss_dssp -CEEEEECCSHH-HHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred CCEEEEECccHH-HHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHh
Confidence 478999999886 9999999999999 99999985 136678889999999999876532 1
Q ss_pred -CCCcCCCeEEEEeeec
Q 017438 297 -GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 -~d~ik~gavVIDvgin 312 (371)
.+.+++|.+|||+...
T Consensus 103 l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 103 AGPHLCEGALYADFTSC 119 (312)
T ss_dssp HGGGCCTTCEEEECCCC
T ss_pred hHhhcCCCCEEEEcCCC
Confidence 2356789999998643
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0002 Score=66.55 Aligned_cols=71 Identities=18% Similarity=0.313 Sum_probs=55.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-------------HHhhccCCcEEEEccCCCC-c---cc--CCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-------------PEEITRQADIIISAVGQPN-M---VR--GSW 299 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-------------l~~~l~~ADIVIsAvG~p~-~---v~--~d~ 299 (371)
++|.|||.|.+ |..++..|.+ |.+|++++++... +.+.+.++|+||.+++.+. + +. .++
T Consensus 2 ~~i~iiG~G~~-G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAM-GYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY 79 (289)
T ss_dssp CCEEEECCSTT-HHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred CeEEEEcccHH-HHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhh
Confidence 46999999885 9999999999 9999999876321 3455778999999999764 2 21 256
Q ss_pred cCCCeEEEEeee
Q 017438 300 IKPGAVIIDVGI 311 (371)
Q Consensus 300 ik~gavVIDvgi 311 (371)
+++|.+|||++.
T Consensus 80 l~~~~~vv~~s~ 91 (289)
T 2cvz_A 80 LREGTYWVDATS 91 (289)
T ss_dssp CCTTEEEEECSC
T ss_pred CCCCCEEEECCC
Confidence 789999999863
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00024 Score=66.44 Aligned_cols=70 Identities=26% Similarity=0.375 Sum_probs=55.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cccC----
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG---- 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~~---- 297 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.|. .+..
T Consensus 2 ~i~iiG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 2 PVGFIGLGNM-GNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CEEEECCSTT-HHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred eEEEEeccHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 6899999886 9999999999999999998752 356677889999999998763 2221
Q ss_pred -CCcCCCeEEEEee
Q 017438 298 -SWIKPGAVIIDVG 310 (371)
Q Consensus 298 -d~ik~gavVIDvg 310 (371)
+++++|.+|||..
T Consensus 81 ~~~l~~~~~vv~~s 94 (296)
T 2gf2_A 81 LKKVKKGSLLIDSS 94 (296)
T ss_dssp GGTCCTTCEEEECS
T ss_pred HhcCCCCCEEEECC
Confidence 2568899999954
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00024 Score=67.36 Aligned_cols=71 Identities=25% Similarity=0.454 Sum_probs=56.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cccC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG--- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~~--- 297 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.|. .+..
T Consensus 31 ~~I~iIG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 31 KKIGFLGLGLM-GSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SCEEEECCSHH-HHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CeEEEEcccHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 67999999885 9999999999999999998753 245567788999999998543 2222
Q ss_pred --CCcCCCeEEEEee
Q 017438 298 --SWIKPGAVIIDVG 310 (371)
Q Consensus 298 --d~ik~gavVIDvg 310 (371)
+++++|.+|||++
T Consensus 110 ~~~~l~~~~~vv~~s 124 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMS 124 (316)
T ss_dssp GGGGCCTTCEEEECS
T ss_pred HhhcCCCCCEEEECC
Confidence 4678999999986
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00058 Score=69.73 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=58.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccC---CcEEEEccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQ---ADIIISAVGQ 291 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~---ADIVIsAvG~ 291 (371)
......++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.+++ +|+||.+++.
T Consensus 10 ~~~~~~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~ 88 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVM-GRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKA 88 (480)
T ss_dssp -----CBSEEEECCSHH-HHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCS
T ss_pred ccccCCCeEEEEccHHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCC
Confidence 34567889999999886 9999999999999999998752 245566665 9999999987
Q ss_pred CCc----cc--CCCcCCCeEEEEeeec
Q 017438 292 PNM----VR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 292 p~~----v~--~d~ik~gavVIDvgin 312 (371)
+.. +. ...+++|.+|||++..
T Consensus 89 ~~~v~~vl~~l~~~l~~g~iIId~s~g 115 (480)
T 2zyd_A 89 GAGTDAAIDSLKPYLDKGDIIIDGGNT 115 (480)
T ss_dssp SSHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 532 21 1357889999999843
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00045 Score=54.79 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCCc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~~ 294 (371)
.+++++|+|+|. +|+.++..|.+.| .+|+++.++.. ++.+.++++|+||.++|....
T Consensus 4 ~~~~v~I~G~G~-iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGK-IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSH-HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 468999999965 5999999999999 89999987631 233456778888888763211
Q ss_pred --ccCCCcCCCeEEEEee
Q 017438 295 --VRGSWIKPGAVIIDVG 310 (371)
Q Consensus 295 --v~~d~ik~gavVIDvg 310 (371)
+-....+.|..++|+.
T Consensus 83 ~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHhCCCEEEec
Confidence 1112235566666654
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00034 Score=65.52 Aligned_cols=72 Identities=28% Similarity=0.433 Sum_probs=57.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cccC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG--- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~~--- 297 (371)
.++.|||.|.+ |..++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+..
T Consensus 5 ~~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 5 IKIGFIGLGAM-GKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CEEEEECCCTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 58999999885 9999999999999999997752 356677888999999998754 2321
Q ss_pred --CCcCCCeEEEEeee
Q 017438 298 --SWIKPGAVIIDVGI 311 (371)
Q Consensus 298 --d~ik~gavVIDvgi 311 (371)
+++++|.+|||+..
T Consensus 84 l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 84 VLSACKAGTVIVDMSS 99 (301)
T ss_dssp HHHHSCTTCEEEECCC
T ss_pred HhhcCCCCCEEEECCC
Confidence 24688999999863
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00065 Score=61.28 Aligned_cols=74 Identities=20% Similarity=0.384 Sum_probs=53.1
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCC---cccC--CCcCCCeEE
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPN---MVRG--SWIKPGAVI 306 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~---~v~~--d~ik~gavV 306 (371)
.+.++.++++.|||.|.+ |.+++..|.+.|.+|++++++.. .+++||+||.+++.+. ++.. ..++ +++|
T Consensus 13 ~~~~~~~~~I~iiG~G~m-G~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~v 86 (209)
T 2raf_A 13 ENLYFQGMEITIFGKGNM-GQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIMAVPYPALAALAKQYATQLK-GKIV 86 (209)
T ss_dssp -------CEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEE
T ss_pred cccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEE
Confidence 456788999999999885 99999999999999999987643 6789999999998322 1211 2356 8999
Q ss_pred EEeee
Q 017438 307 IDVGI 311 (371)
Q Consensus 307 IDvgi 311 (371)
||+.-
T Consensus 87 i~~~~ 91 (209)
T 2raf_A 87 VDITN 91 (209)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 99863
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00061 Score=62.57 Aligned_cols=69 Identities=25% Similarity=0.439 Sum_probs=53.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC----eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCc----c
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA----TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM----V 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA----tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~----v 295 (371)
+++.|||.|.+ |.+++..|.+.|. +|++++++. .+.++.++++|+||.++ .|.. +
T Consensus 3 ~~i~iIG~G~m-G~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav-~~~~~~~v~ 80 (247)
T 3gt0_A 3 KQIGFIGCGNM-GMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSI-KPDLYASII 80 (247)
T ss_dssp CCEEEECCSHH-HHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECS-CTTTHHHHC
T ss_pred CeEEEECccHH-HHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEe-CHHHHHHHH
Confidence 57999999886 9999999999997 999998762 35667788999999999 4442 2
Q ss_pred c--CCCcCCCeEEEEe
Q 017438 296 R--GSWIKPGAVIIDV 309 (371)
Q Consensus 296 ~--~d~ik~gavVIDv 309 (371)
+ ..+++++.+||.+
T Consensus 81 ~~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTI 96 (247)
T ss_dssp ---CCSSCTTCEEEEC
T ss_pred HHHHhhcCCCCEEEEe
Confidence 1 2356788888743
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00036 Score=65.28 Aligned_cols=72 Identities=22% Similarity=0.365 Sum_probs=57.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----ccc--C-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVR--G- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~--~- 297 (371)
.+|.|||.|.+ |..++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+. .
T Consensus 6 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~ 84 (299)
T 1vpd_A 6 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 84 (299)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred ceEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence 37999999885 9999999999999999997752 356677888999999998653 231 1
Q ss_pred --CCcCCCeEEEEeee
Q 017438 298 --SWIKPGAVIIDVGI 311 (371)
Q Consensus 298 --d~ik~gavVIDvgi 311 (371)
+++++|.+|||++.
T Consensus 85 l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 85 IIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHHHCCTTCEEEECSC
T ss_pred HhhcCCCCCEEEECCC
Confidence 34688999999863
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00099 Score=59.78 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.+++||+|+|.|+++-+|+.++..|+++|++|+++.|+..
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999999999888999999999999999999987643
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00068 Score=63.15 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=56.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----ccc----
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVR---- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~---- 296 (371)
.+|.|||.|.+ |..++..|.+.|.+|++++ +. .++.+.++++|+||.+++.+. .+.
T Consensus 4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 81 (295)
T 1yb4_A 4 MKLGFIGLGIM-GSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHG 81 (295)
T ss_dssp CEEEECCCSTT-HHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CEEEEEccCHH-HHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchh
Confidence 47999999885 9999999999999999887 42 245567889999999998764 232
Q ss_pred -CCCcCCCeEEEEeee
Q 017438 297 -GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 -~d~ik~gavVIDvgi 311 (371)
.+++++|.+|||+..
T Consensus 82 l~~~l~~~~~vv~~s~ 97 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSS 97 (295)
T ss_dssp STTSCCTTEEEEECSC
T ss_pred HhhcCCCCCEEEECCC
Confidence 135788999999863
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.00013 Score=66.08 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CHHhhccCCcEEEEccCCCCc---ccCCCc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NPEEITRQADIIISAVGQPNM---VRGSWI 300 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l~~~l~~ADIVIsAvG~p~~---v~~d~i 300 (371)
+.++++.|||.|.+ |..++..|.+.|.+|++++++.. ++.+.++++|+||.++....+ +.-...
T Consensus 17 ~~~~~I~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~ 95 (201)
T 2yjz_A 17 EKQGVVCIFGTGDF-GKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADS 95 (201)
Confidence 56788999999886 99999999999999999876532 334567889999999985332 211113
Q ss_pred CCCeEEEEeee
Q 017438 301 KPGAVIIDVGI 311 (371)
Q Consensus 301 k~gavVIDvgi 311 (371)
+++++|||+.-
T Consensus 96 ~~~~ivI~~~~ 106 (201)
T 2yjz_A 96 LKGRVLIDVSN 106 (201)
Confidence 56889999873
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00045 Score=64.27 Aligned_cols=72 Identities=14% Similarity=0.210 Sum_probs=55.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC----------------CCCHHhhcc-CCcEEEEccCCCC---ccc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR----------------TKNPEEITR-QADIIISAVGQPN---MVR 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~----------------t~~l~~~l~-~ADIVIsAvG~p~---~v~ 296 (371)
++|.|||.|.+ |..++..|.+.|. +|++++++ +.++.+.++ ++|+||.+++... ++.
T Consensus 2 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK 80 (281)
T ss_dssp CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH
T ss_pred cEEEEEecCHH-HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH
Confidence 57999999885 9999999999987 89998764 235667788 9999999998432 222
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
..+++++.+|+|++.
T Consensus 81 ~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGS 97 (281)
T ss_dssp HHHHHSCTTCEEEECCS
T ss_pred HHHhhCCCCcEEEECCC
Confidence 134688999999873
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00041 Score=64.04 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC---------------CCHHhhccCCcEEEEccCCCC---ccc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT---------------KNPEEITRQADIIISAVGQPN---MVR 296 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~---~v~ 296 (371)
+.+.+|.|||.|.+ |..++..|.+.|.+ |++++++. .++++.++++|+||.+++... ++.
T Consensus 8 ~~~m~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~ 86 (266)
T 3d1l_A 8 IEDTPIVLIGAGNL-ATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQ 86 (266)
T ss_dssp GGGCCEEEECCSHH-HHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHH
T ss_pred CCCCeEEEEcCCHH-HHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHH
Confidence 45678999999875 99999999998988 88887652 356677889999999998542 221
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
...+++|++|+|+..
T Consensus 87 ~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAG 103 (266)
T ss_dssp HHHTTCCTTCEEEECCT
T ss_pred HHHhhcCCCcEEEECCC
Confidence 135678999999853
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00056 Score=61.89 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=54.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccCCCC---ccc-CCCc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVGQPN---MVR-GSWI 300 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG~p~---~v~-~d~i 300 (371)
++++.|||.|.+ |+.++..|.+.|.+|++++++.. ++.+.++++|+||.+++... ++. ....
T Consensus 28 ~~~I~iiG~G~~-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~l~~~~ 106 (215)
T 2vns_A 28 APKVGILGSGDF-ARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQL 106 (215)
T ss_dssp -CCEEEECCSHH-HHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGGSGGGGGGHHHH
T ss_pred CCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHHHHHHHHHHHhc
Confidence 468999998875 99999999999999999987632 35567889999999998422 121 0122
Q ss_pred CCCeEEEEeeec
Q 017438 301 KPGAVIIDVGIN 312 (371)
Q Consensus 301 k~gavVIDvgin 312 (371)
++++|||+...
T Consensus 107 -~~~~vv~~s~g 117 (215)
T 2vns_A 107 -AGKILVDVSNP 117 (215)
T ss_dssp -TTCEEEECCCC
T ss_pred -CCCEEEEeCCC
Confidence 78999999843
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0013 Score=60.33 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=53.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCcccC--CCcC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMVRG--SWIK 301 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v~~--d~ik 301 (371)
.++.|||.|.+ |+.++..|.+.|..|++++++. .++.+.++++|+||.+++ |..+.. +.++
T Consensus 4 m~i~iiG~G~m-G~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTSC
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHHHhc
Confidence 47999999885 9999999999999999998752 356677889999999998 442210 1245
Q ss_pred CCeEEEEe
Q 017438 302 PGAVIIDV 309 (371)
Q Consensus 302 ~gavVIDv 309 (371)
+|.++||+
T Consensus 82 ~~~~vv~~ 89 (259)
T 2ahr_A 82 FKQPIISM 89 (259)
T ss_dssp CCSCEEEC
T ss_pred cCCEEEEe
Confidence 77888887
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00073 Score=62.68 Aligned_cols=69 Identities=22% Similarity=0.231 Sum_probs=53.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc--CC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR--GS 298 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~--~d 298 (371)
+|.|||.|.+ |..++..|.+.|.+|++++++. .++.+. .++|+||.+++... ++. ..
T Consensus 2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIP 79 (279)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGG
T ss_pred EEEEEcCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHh
Confidence 6899999885 9999999999999999997652 245566 89999999998432 222 24
Q ss_pred CcCCCeEEEEee
Q 017438 299 WIKPGAVIIDVG 310 (371)
Q Consensus 299 ~ik~gavVIDvg 310 (371)
+++++++|+|++
T Consensus 80 ~~~~~~~vv~~~ 91 (279)
T 2f1k_A 80 HLSPTAIVTDVA 91 (279)
T ss_dssp GSCTTCEEEECC
T ss_pred hCCCCCEEEECC
Confidence 578899999985
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0011 Score=62.43 Aligned_cols=71 Identities=17% Similarity=0.247 Sum_probs=54.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------------------CCHHhhc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------------KNPEEIT 279 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------------------~~l~~~l 279 (371)
++|.|||.|.+ |..+|..|++.|.+|++++++. .++.+.+
T Consensus 5 ~kV~VIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVL-GSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 78999999885 9999999999999999997652 2344668
Q ss_pred cCCcEEEEccCCCC-----ccc--CCCcCCCeEEEEee
Q 017438 280 RQADIIISAVGQPN-----MVR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 280 ~~ADIVIsAvG~p~-----~v~--~d~ik~gavVIDvg 310 (371)
++||+||.+++... ++. .+.++++++++|..
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 89999999997531 111 12467899988754
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0011 Score=63.50 Aligned_cols=71 Identities=14% Similarity=0.277 Sum_probs=54.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCCC----------------CHHhhccCCcEEEEccCCCCccc-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRTK----------------NPEEITRQADIIISAVGQPNMVR- 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t~----------------~l~~~l~~ADIVIsAvG~p~~v~- 296 (371)
..+|.|||.|.+ |.+++..|.+.| ..|++++++.. +..+.++++|+||.++. |..+.
T Consensus 22 ~mkI~iIG~G~m-G~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 22 SMSVGFIGAGQL-AFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp CCCEEEESCSHH-HHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 357999999885 999999999998 68999987642 34456778999999997 44221
Q ss_pred -----CCCcCCCeEEEEee
Q 017438 297 -----GSWIKPGAVIIDVG 310 (371)
Q Consensus 297 -----~d~ik~gavVIDvg 310 (371)
...++++.+|||+.
T Consensus 100 vl~~l~~~l~~~~ivvs~s 118 (322)
T 2izz_A 100 ILDEIGADIEDRHIVVSCA 118 (322)
T ss_dssp HHHHHGGGCCTTCEEEECC
T ss_pred HHHHHHhhcCCCCEEEEeC
Confidence 13467899999984
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0014 Score=63.87 Aligned_cols=112 Identities=19% Similarity=0.282 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCC-Cc-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEITRQADIIISAVGQP-NM- 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p-~~- 294 (371)
+..||+|+|+|. ||++++..|.+ +..|+++.+.. ..+.+.++++|+||+++|.- +.
T Consensus 15 ~~mkilvlGaG~-vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~ 92 (365)
T 3abi_A 15 RHMKVLILGAGN-IGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFK 92 (365)
T ss_dssp -CCEEEEECCSH-HHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHH
T ss_pred CccEEEEECCCH-HHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccch
Confidence 344799999976 59999998865 56888886541 23567889999999999742 11
Q ss_pred ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCC-CCccHHHHHHHHHHHHHH
Q 017438 295 VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVP-GGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 295 v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVP-GGVGp~T~amLl~n~v~a 363 (371)
+-...++-|..++|+.+.+.+. -.. ++.++.++..- +| =|+-|=-..|+...+++.
T Consensus 93 v~~~~~~~g~~yvD~s~~~~~~----------~~l--~~~a~~~g~~~-i~~~G~~PG~~~~~a~~~~~~ 149 (365)
T 3abi_A 93 SIKAAIKSKVDMVDVSFMPENP----------LEL--RDEAEKAQVTI-VFDAGFAPGLSNILMGRIFQE 149 (365)
T ss_dssp HHHHHHHHTCEEEECCCCSSCG----------GGG--HHHHHHTTCEE-ECCCBTTTBHHHHHHHHHHHH
T ss_pred HHHHHHhcCcceEeeeccchhh----------hhh--hhhhccCCcee-eecCCCCCchHHHHHHHHHHh
Confidence 3345567799999988654321 112 23344454321 22 256666677777666543
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0031 Score=62.39 Aligned_cols=89 Identities=17% Similarity=0.276 Sum_probs=64.9
Q ss_pred cCCHHHHHHH----HHHhCC-CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhcc
Q 017438 219 PCTPKGCIEL----LHRYGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITR 280 (371)
Q Consensus 219 PcTa~gvi~l----L~~~~i-~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~ 280 (371)
+.|.+|++.. +++.+. +++||+|+|+|.|++ |+.++..|...|++|.+++++.. +..+.+.
T Consensus 151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnV-G~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~ 229 (355)
T 1c1d_A 151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAV-GGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLS 229 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGG
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhc
Confidence 6788886655 556787 899999999999985 99999999999999997765421 2234444
Q ss_pred -CCcEEEEccCCCCcccCCC---cCCCeEEEEee
Q 017438 281 -QADIIISAVGQPNMVRGSW---IKPGAVIIDVG 310 (371)
Q Consensus 281 -~ADIVIsAvG~p~~v~~d~---ik~gavVIDvg 310 (371)
++||++.+ ...+.|+.+. ++ ..+|++.+
T Consensus 230 ~~~DIliP~-A~~~~I~~~~~~~lk-~~iVie~A 261 (355)
T 1c1d_A 230 TPCDVFAPC-AMGGVITTEVARTLD-CSVVAGAA 261 (355)
T ss_dssp CCCSEEEEC-SCSCCBCHHHHHHCC-CSEECCSC
T ss_pred CccceecHh-HHHhhcCHHHHhhCC-CCEEEECC
Confidence 88998854 3456676543 34 46777766
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0016 Score=65.97 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------CHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
++|+|+|+|+|++ |+.++..|.+.|++|++++++.. ++.+.++++|+||+++|...
T Consensus 2 ~~k~VlViGaG~i-G~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~ 80 (450)
T 1ff9_A 2 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF 80 (450)
T ss_dssp CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence 5789999998775 99999999999999999987510 23355678999999998532
Q ss_pred -c-ccCCCcCCCeEEEEeee
Q 017438 294 -M-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 294 -~-v~~d~ik~gavVIDvgi 311 (371)
. +..+.++.|..++|..+
T Consensus 81 ~~~i~~a~l~~g~~vvd~~~ 100 (450)
T 1ff9_A 81 HATVIKSAIRQKKHVVTTSY 100 (450)
T ss_dssp HHHHHHHHHHHTCEEEESSC
T ss_pred chHHHHHHHhCCCeEEEeec
Confidence 1 34456777888888753
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0018 Score=65.53 Aligned_cols=72 Identities=26% Similarity=0.338 Sum_probs=55.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~ADI 284 (371)
.+|.|||.|. +|.++|..|++.|.+|++++++. .++++.+++||+
T Consensus 3 mkI~VIG~G~-vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 3 LDIAVVGIGY-VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CEEEEECcCH-HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 4899999987 59999999999999999987641 244556889999
Q ss_pred EEEccCCCC---------ccc------CCCcCCCeEEEEeee
Q 017438 285 IISAVGQPN---------MVR------GSWIKPGAVIIDVGI 311 (371)
Q Consensus 285 VIsAvG~p~---------~v~------~d~ik~gavVIDvgi 311 (371)
||.+++.|. .+. ...+++|++|||...
T Consensus 82 ViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 999999872 111 124678999988764
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0019 Score=66.32 Aligned_cols=75 Identities=19% Similarity=0.249 Sum_probs=57.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhcc---CCcEEEEccCCCCc-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEITR---QADIIISAVGQPNM- 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~---~ADIVIsAvG~p~~- 294 (371)
.++|.|||.|.+ |.++|..|.+.|.+|++++++. .++++.+. ++|+||.+++.+..
T Consensus 4 ~~kIgiIGlG~M-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 4 QADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp CBSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CCEEEEEChhHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 367999999886 9999999999999999998763 24445544 59999999987532
Q ss_pred ---cc--CCCcCCCeEEEEeeecC
Q 017438 295 ---VR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDvgin~ 313 (371)
+. ...+++|.+|||++...
T Consensus 83 ~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 83 DDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCC
Confidence 21 24578999999998543
|
| >3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ... | Back alignment and structure |
|---|
Probab=96.55 E-value=0.11 Score=50.40 Aligned_cols=159 Identities=13% Similarity=0.108 Sum_probs=108.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC----CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED----TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSI 187 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~----v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i 187 (371)
.++.|-.- .|..---+=..++.++|.++.++.-... ..-|-+.+.++-|..- +|+|.+--|-.. ..+.+
T Consensus 43 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~l 115 (310)
T 3csu_A 43 VIASCFFE---ASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY--VDAIVMRHPQEG--AARLA 115 (310)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTT--CSEEEEEESSTT--HHHHH
T ss_pred EEEEEecC---CCccHHHHHHHHHHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHh--CCEEEEECCChh--HHHHH
Confidence 45554443 3555445667899999999887754332 1346788899999875 789998876432 33333
Q ss_pred HhhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccC-CC
Q 017438 188 LNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQRE-DA 263 (371)
Q Consensus 188 ~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~-gA 263 (371)
.+.. ..+-.+|.|- | +.+.||-+.+ ++.+.|+.| .++|++|+++|-+ +-|.+.++..|... |+
T Consensus 116 a~~~------~~vPVINag~---G---~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~ 182 (310)
T 3csu_A 116 TEFS------GNVPVLNAGD---G---SNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGN 182 (310)
T ss_dssp HHHC------TTCCEEEEEE---T---TSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSC
T ss_pred HHhc------CCCCEEcCcc---C---CCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCC
Confidence 3222 1234556421 1 4567998888 555555554 7999999999986 34699999999999 99
Q ss_pred eEEEEeCC---------------------CCCHHhhccCCcEEEEccC
Q 017438 264 TVSIVHSR---------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 264 tVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG 290 (371)
+|+++.-. +.++++.+++||+|.+-.-
T Consensus 183 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 183 RFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred EEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 99998522 3577889999999997653
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.003 Score=63.87 Aligned_cols=78 Identities=23% Similarity=0.381 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhh---------------ccCCcE
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEI---------------TRQADI 284 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~---------------l~~ADI 284 (371)
.-.|.+.+|||.|- ||.|+|..|++.|.+|++++++. ..+++. +++||+
T Consensus 8 ~~~~~~~~ViGlGy-vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDv 86 (431)
T 3ojo_A 8 HHHGSKLTVVGLGY-IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDV 86 (431)
T ss_dssp ----CEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSE
T ss_pred cccCCccEEEeeCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCE
Confidence 34789999999988 59999999999999999998652 122221 457999
Q ss_pred EEEccCCCCccc-----------------CCCcCCCeEEEEeeecC
Q 017438 285 IISAVGQPNMVR-----------------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 285 VIsAvG~p~~v~-----------------~d~ik~gavVIDvgin~ 313 (371)
||.++|.|.-.+ .+.+++|++|||...-+
T Consensus 87 vii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~ 132 (431)
T 3ojo_A 87 FIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA 132 (431)
T ss_dssp EEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred EEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 999999875211 13568899999977544
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0013 Score=53.89 Aligned_cols=56 Identities=27% Similarity=0.311 Sum_probs=41.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------C---HHhh-ccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------N---PEEI-TRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~---l~~~-l~~ADIVIsAvG~p 292 (371)
+++++++|+|.|. +|+.++..|.+.|++|+++.++.. + +.+. +.++|+||.++|.+
T Consensus 4 ~~~~~v~I~G~G~-iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGR-FGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSH-HHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 5688999999966 599999999999999998876421 1 1121 56789999888865
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0095 Score=60.38 Aligned_cols=83 Identities=22% Similarity=0.327 Sum_probs=61.8
Q ss_pred HHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCc
Q 017438 227 ELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQAD 283 (371)
Q Consensus 227 ~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~AD 283 (371)
++.+..+.+++||+|.|+|-+ +.-...++..|.++|++|.+..-. ..++++.++.||
T Consensus 311 ~i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad 390 (446)
T 4a7p_A 311 KVIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGAD 390 (446)
T ss_dssp HHHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBS
T ss_pred HHHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCC
Confidence 344455778999999999975 233678999999999999998532 235678899999
Q ss_pred EEEEccCCCCcccCCC--cC---CCeEEEEe
Q 017438 284 IIISAVGQPNMVRGSW--IK---PGAVIIDV 309 (371)
Q Consensus 284 IVIsAvG~p~~v~~d~--ik---~gavVIDv 309 (371)
+||.+|..+.|-..+| ++ .+.+|+|.
T Consensus 391 ~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~ 421 (446)
T 4a7p_A 391 ALVIVTEWDAFRALDLTRIKNSLKSPVLVDL 421 (446)
T ss_dssp EEEECSCCTTTTSCCHHHHHTTBSSCBEECS
T ss_pred EEEEeeCCHHhhcCCHHHHHHhcCCCEEEEC
Confidence 9999999988743332 32 24578884
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0011 Score=62.13 Aligned_cols=72 Identities=11% Similarity=0.309 Sum_probs=55.0
Q ss_pred CEEEEEcC-CcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccCCCC---ccc--CCC
Q 017438 239 KRAVVIGR-SNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVGQPN---MVR--GSW 299 (371)
Q Consensus 239 K~vvVIG~-s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG~p~---~v~--~d~ 299 (371)
++|.|||. |.+ |.+++..|.+.|.+|++++++.. +..+.++++|+||.+++... ++. ...
T Consensus 12 m~I~iIG~tG~m-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKM-GARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPR 90 (286)
T ss_dssp CEEEEETTTSHH-HHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHHHHHGGG
T ss_pred CEEEEECCCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHHHHHHHh
Confidence 58999999 775 99999999999999999987521 34466789999999997432 121 134
Q ss_pred cCCCeEEEEeee
Q 017438 300 IKPGAVIIDVGI 311 (371)
Q Consensus 300 ik~gavVIDvgi 311 (371)
++++++|||+..
T Consensus 91 l~~~~ivv~~s~ 102 (286)
T 3c24_A 91 VRPGTIVLILDA 102 (286)
T ss_dssp SCTTCEEEESCS
T ss_pred CCCCCEEEECCC
Confidence 678999999654
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0034 Score=60.99 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=68.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------H
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------P 275 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l 275 (371)
.+||.....+..|+..++...|++|+|+|+|+ +|..+++++...|++|++..+.... +
T Consensus 167 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~ 245 (366)
T 1yqd_A 167 PLLCAGITVYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQM 245 (366)
T ss_dssp GGGTHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHH
T ss_pred hhhhhHHHHHHHHHhcCcCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHH
Confidence 34665556667777776655899999999866 6999999999999998887654321 1
Q ss_pred HhhccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 276 EEITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ~~~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
++....+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 246 ~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 246 QAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp HHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred HHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence 222346799999999765432 2457888888888864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0027 Score=56.75 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCCC---------------------CHHhhccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK---------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p 292 (371)
+++|+++|.|+++-+|+.++..|+++|+ +|+++.|+.. ++++.++..|+||..+|..
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5789999999988899999999999999 9999877532 2335567789999888853
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0025 Score=65.40 Aligned_cols=73 Identities=18% Similarity=0.189 Sum_probs=56.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhccC---CcEEEEccCCCCc-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQ---ADIIISAVGQPNM- 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~~---ADIVIsAvG~p~~- 294 (371)
.++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.++. +|+||.+++.+..
T Consensus 10 ~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 10 SADFGLIGLAVM-GQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCCEEEEeeHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 467999999886 9999999999999999998753 244555555 9999999987532
Q ss_pred ---cc--CCCcCCCeEEEEeee
Q 017438 295 ---VR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDvgi 311 (371)
+. ...+++|.+|||++.
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~ 110 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGN 110 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSC
T ss_pred HHHHHHHHHhCCCCCEEEECCC
Confidence 21 135788999999874
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0032 Score=63.70 Aligned_cols=74 Identities=18% Similarity=0.328 Sum_probs=55.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCC---------------------------------CCHHhhccCCc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRT---------------------------------KNPEEITRQAD 283 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t---------------------------------~~l~~~l~~AD 283 (371)
.+|.|||.|.+ |.++|..|++. |.+|++++++. .++.+.+++||
T Consensus 6 mkI~VIG~G~m-G~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 6 KKICCIGAGYV-GGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 58999999885 99999999988 78999997641 12334567899
Q ss_pred EEEEccCCCCccc--------------------CCCcCCCeEEEEeeecC
Q 017438 284 IIISAVGQPNMVR--------------------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 284 IVIsAvG~p~~v~--------------------~d~ik~gavVIDvgin~ 313 (371)
+||.+++.|.-.+ ...+++|++|||....+
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 134 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVP 134 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCC
Confidence 9999998765321 12468899999975443
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0024 Score=60.38 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=54.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeC--CC-------------------------C--CHHhhccCCcEEEEccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHS--RT-------------------------K--NPEEITRQADIIISAVG 290 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~--~t-------------------------~--~l~~~l~~ADIVIsAvG 290 (371)
+|.|||.|.+ |.+++..|.+.|.+|+++++ +. . ++.+.++++|+||.+++
T Consensus 2 ~I~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred EEEEECcCHH-HHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 6899999885 99999999999999999987 41 1 34456789999999998
Q ss_pred CCCc------ccCCCcCCCeEEEEee
Q 017438 291 QPNM------VRGSWIKPGAVIIDVG 310 (371)
Q Consensus 291 ~p~~------v~~d~ik~gavVIDvg 310 (371)
.+.. +. . ++++++|||+.
T Consensus 81 ~~~~~~v~~~i~-~-l~~~~~vv~~~ 104 (335)
T 1txg_A 81 TDGVLPVMSRIL-P-YLKDQYIVLIS 104 (335)
T ss_dssp GGGHHHHHHHHT-T-TCCSCEEEECC
T ss_pred hHHHHHHHHHHh-c-CCCCCEEEEEc
Confidence 6542 23 3 78899999984
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.002 Score=60.84 Aligned_cols=70 Identities=14% Similarity=0.258 Sum_probs=53.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCccc---
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMVR--- 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v~--- 296 (371)
.+++.|||.|.+ |..++..|.+.|. .|++++++. .+..+.++++|+||.++. |..+.
T Consensus 3 ~~~I~iIG~G~m-G~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~~vl 80 (280)
T 3tri_A 3 TSNITFIGGGNM-ARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIKMVC 80 (280)
T ss_dssp CSCEEEESCSHH-HHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHHHHH
T ss_pred CCEEEEEcccHH-HHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHHHHH
Confidence 478999999886 9999999999987 899998763 356677899999999994 44221
Q ss_pred ---CCC-cCCCeEEEEe
Q 017438 297 ---GSW-IKPGAVIIDV 309 (371)
Q Consensus 297 ---~d~-ik~gavVIDv 309 (371)
.+. ++++++||.+
T Consensus 81 ~~l~~~~l~~~~iiiS~ 97 (280)
T 3tri_A 81 EELKDILSETKILVISL 97 (280)
T ss_dssp HHHHHHHHTTTCEEEEC
T ss_pred HHHHhhccCCCeEEEEe
Confidence 123 5677677754
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0023 Score=64.99 Aligned_cols=72 Identities=25% Similarity=0.285 Sum_probs=56.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccC---CcEEEEccCCCCc---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQ---ADIIISAVGQPNM--- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~---ADIVIsAvG~p~~--- 294 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.+++ +|+||.+++.+..
T Consensus 6 ~~IgvIG~G~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~ 84 (474)
T 2iz1_A 6 ANFGVVGMAVM-GKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA 84 (474)
T ss_dssp BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred CcEEEEeeHHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence 57999999885 9999999999999999998752 245565555 9999999987532
Q ss_pred -cc--CCCcCCCeEEEEeee
Q 017438 295 -VR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 295 -v~--~d~ik~gavVIDvgi 311 (371)
+. ...+++|.+|||++.
T Consensus 85 vl~~l~~~l~~g~iiId~s~ 104 (474)
T 2iz1_A 85 TIKSLLPLLDIGDILIDGGN 104 (474)
T ss_dssp HHHHHGGGCCTTCEEEECSC
T ss_pred HHHHHHhhCCCCCEEEECCC
Confidence 22 245788999999874
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0032 Score=63.91 Aligned_cols=74 Identities=23% Similarity=0.289 Sum_probs=57.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQAD 283 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~AD 283 (371)
.-++.|||.|- +|.|+|..|++.|.+|++++++. .++++.+++||
T Consensus 8 ~~~~~vIGlG~-vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 8 SVRIAMIGTGY-VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred ceEEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 35899999987 59999999999999999997542 24456788999
Q ss_pred EEEEccCCCC----------ccc------CCCcCCCeEEEEeeec
Q 017438 284 IIISAVGQPN----------MVR------GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 284 IVIsAvG~p~----------~v~------~d~ik~gavVIDvgin 312 (371)
+||.++|.|. .+. ...+++|++|||...-
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 9999988773 121 1357889999997643
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0037 Score=59.04 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=53.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------------------------------CCH
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------------------------KNP 275 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------------------------------~~l 275 (371)
++|.|||.|.+ |.++|..|++.|.+|++++++. .++
T Consensus 16 ~~I~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 16 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 68999999885 9999999999999999997642 234
Q ss_pred HhhccCCcEEEEccCCCC-----ccc--CCCcCCCeEEEEe
Q 017438 276 EEITRQADIIISAVGQPN-----MVR--GSWIKPGAVIIDV 309 (371)
Q Consensus 276 ~~~l~~ADIVIsAvG~p~-----~v~--~d~ik~gavVIDv 309 (371)
.+.+++||+||.+++... ++. ...++++++|++.
T Consensus 95 ~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 95 ASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp HHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred HHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 456789999999997532 111 2356788888764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0035 Score=58.89 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=46.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------------CHHhhccCCcEEEEcc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------NPEEITRQADIIISAV 289 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------~l~~~l~~ADIVIsAv 289 (371)
.+|+||.++|-|++.=+|+.+|..|+++||+|.++.+... ...+..-.-|++|+.+
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 86 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML 86 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4799999999999988899999999999999999987531 1123345679999887
Q ss_pred CC
Q 017438 290 GQ 291 (371)
Q Consensus 290 G~ 291 (371)
|.
T Consensus 87 G~ 88 (261)
T 4h15_A 87 GG 88 (261)
T ss_dssp CC
T ss_pred CC
Confidence 73
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0014 Score=61.10 Aligned_cols=72 Identities=24% Similarity=0.323 Sum_probs=54.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~ 296 (371)
-++|.|||.|.+ |.+++..|.+. +.+|++++++. .++++.++++|+||.+++... ++.
T Consensus 6 ~~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~ 84 (290)
T 3b1f_A 6 EKTIYIAGLGLI-GASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIK 84 (290)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHH
T ss_pred cceEEEEeeCHH-HHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHH
Confidence 368999999885 99999999877 57899987642 245566789999999997432 222
Q ss_pred --CCC-cCCCeEEEEee
Q 017438 297 --GSW-IKPGAVIIDVG 310 (371)
Q Consensus 297 --~d~-ik~gavVIDvg 310 (371)
..+ ++++.+|+|++
T Consensus 85 ~l~~~~l~~~~ivi~~~ 101 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAG 101 (290)
T ss_dssp HHHTSCCCTTCEEECCC
T ss_pred HHHhcCCCCCCEEEECC
Confidence 245 78899999975
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0038 Score=63.21 Aligned_cols=81 Identities=23% Similarity=0.326 Sum_probs=56.2
Q ss_pred HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------------------------CCCHHh
Q 017438 230 HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------TKNPEE 277 (371)
Q Consensus 230 ~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------------------t~~l~~ 277 (371)
+..+-..+-.+|.|||.|. +|.++|..|++ |.+|+++++. |.++++
T Consensus 28 ~~~~r~~~~mkIaVIGlG~-mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~e 105 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGY-VGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHD 105 (432)
T ss_dssp -------CCCEEEEECCSH-HHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred cccccccCCCEEEEECcCH-HHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHH
Confidence 3333444556999999987 59999999987 9999999754 124567
Q ss_pred hccCCcEEEEccCCCC----------ccc------CCCcCCCeEEEEeeecC
Q 017438 278 ITRQADIIISAVGQPN----------MVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~----------~v~------~d~ik~gavVIDvgin~ 313 (371)
.+++||+||.+++.|. .+. .. +++|++|||...-+
T Consensus 106 a~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 106 AYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp HHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred HHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 7889999999998751 111 12 68999999876543
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0059 Score=58.98 Aligned_cols=94 Identities=20% Similarity=0.316 Sum_probs=67.6
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH---------------------H
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP---------------------E 276 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l---------------------~ 276 (371)
+||.....+..|++.++...|.+|+|+|+|+ +|..+++++...|++|+++.+....+ .
T Consensus 161 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 239 (357)
T 2cf5_A 161 LLCAGVTVYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS 239 (357)
T ss_dssp GGTHHHHHHHHHHHTSTTSTTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence 4555555667777766554799999999866 69999999988999988876543221 1
Q ss_pred hhccCCcEEEEccCCCCcc--cCCCcCCCeEEEEeeec
Q 017438 277 EITRQADIIISAVGQPNMV--RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l~~ADIVIsAvG~p~~v--~~d~ik~gavVIDvgin 312 (371)
+....+|+||.++|.+..+ --+.++++..++.+|..
T Consensus 240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T 2cf5_A 240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVI 277 (357)
T ss_dssp HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCC
T ss_pred HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCC
Confidence 2233579999999976543 23678888888888864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0028 Score=52.60 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=41.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------C---HHh-hccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------N---PEE-ITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~---l~~-~l~~ADIVIsAvG~ 291 (371)
++++++|+|.|. +|+.++..|.++|..|+++.++.. + +++ .+.++|+||.++|.
T Consensus 5 ~~~~v~I~G~G~-iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEA-AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 467899999988 599999999999999999976521 1 111 14678999988884
|
| >1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.056 Score=52.18 Aligned_cols=178 Identities=15% Similarity=0.160 Sum_probs=113.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
.++.|-.- .|..---+=..++.++|.++.++.-.+.. .-|-+.+.++-|..- +|+|.+--|-.. ..+.+.
T Consensus 40 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~la 112 (299)
T 1pg5_A 40 TISIAFFE---PSTRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNY--SDGIVMRHKYDG--ASRFAS 112 (299)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHH--CSEEEEEESSBT--HHHHHH
T ss_pred EEEEEecC---CCcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHh--CCEEEEeCCChh--HHHHHH
Confidence 44444442 35544446678999999998877533211 113455666655553 578888866332 333333
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccC-CCe
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQRE-DAT 264 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~-gAt 264 (371)
+.. .+-.+|.| ..+.+.||-+.+ ++.+.|+.| +++|++++++|-+ +-|.+.++..|... |++
T Consensus 113 ~~~-------~vPVINaG------~g~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~ 178 (299)
T 1pg5_A 113 EIS-------DIPVINAG------DGKHEHPTQAVIDIYTINKHFN-TIDGLVFALLGDLKYARTVNSLLRILTRFRPKL 178 (299)
T ss_dssp HHC-------SSCEEEEE------ETTTBCHHHHHHHHHHHHHHHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSE
T ss_pred HhC-------CCCEEeCC------CCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCE
Confidence 221 23455643 135677998888 555555554 7999999999985 44799999999999 999
Q ss_pred EEEEeCC------------------CCCHHhhccCCcEEEEccCCC--------------Cc-ccCCC---cCCCeEEEE
Q 017438 265 VSIVHSR------------------TKNPEEITRQADIIISAVGQP--------------NM-VRGSW---IKPGAVIID 308 (371)
Q Consensus 265 Vtv~h~~------------------t~~l~~~l~~ADIVIsAvG~p--------------~~-v~~d~---ik~gavVID 308 (371)
|+++.-. +.++++.+++||+|.+-.-.. .+ |+.+. .||+++|.=
T Consensus 179 v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH 258 (299)
T 1pg5_A 179 VYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILH 258 (299)
T ss_dssp EEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEEC
T ss_pred EEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEEC
Confidence 9998522 246788999999999765432 12 34433 267777776
Q ss_pred ee
Q 017438 309 VG 310 (371)
Q Consensus 309 vg 310 (371)
++
T Consensus 259 ~l 260 (299)
T 1pg5_A 259 PL 260 (299)
T ss_dssp CS
T ss_pred CC
Confidence 65
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0081 Score=56.38 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=37.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
+.+|+||.++|-|++.-+|+.+|..|+++||.|.++.++.+
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~ 42 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAP 42 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 46899999999999888899999999999999999987643
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0061 Score=52.56 Aligned_cols=55 Identities=13% Similarity=0.255 Sum_probs=44.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p 292 (371)
+++|+|.|+++-+|+.++..|+++|++|+++.|+.. ++.+.++.+|+||..+|..
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 589999999888999999999999999999876521 2345567788888887743
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0071 Score=54.84 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++..
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~ 47 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS 47 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcH
Confidence 3578999999999999999999999999999999987643
|
| >1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0036 Score=59.80 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++++||+|+|||.|. ||...+..|++.||.|+|+..
T Consensus 9 ~~l~~k~VLVVGgG~-va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEEE
T ss_pred EEcCCCEEEEECCcH-HHHHHHHHHHhCCCEEEEEcC
Confidence 578999999999988 599999999999999999853
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0029 Score=62.12 Aligned_cols=72 Identities=15% Similarity=0.118 Sum_probs=56.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEcc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsAv 289 (371)
-.+|.|||.|.. |.+++..|.+.|.+|+++.++ +.++++.+++||+||.++
T Consensus 29 ~mkI~VIGaG~m-G~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 29 KHPIAILGAGSW-GTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CSCEEEECCSHH-HHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred CCeEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 468999999885 999999999999999998764 135667889999999999
Q ss_pred CCCC---ccc--CCCcCCCeEEEEee
Q 017438 290 GQPN---MVR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 290 G~p~---~v~--~d~ik~gavVIDvg 310 (371)
+... .+. ..+++++++||++.
T Consensus 108 p~~~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 108 PSFAFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 7532 121 24578899999974
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0068 Score=55.36 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=34.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 57999999999998899999999999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0052 Score=57.91 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=44.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------CHHhhccCCcEEEEccCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~l~~~l~~ADIVIsAvG~p 292 (371)
-+.++|+|+|.|+++-+|+.++..|+++|++|+++.+... .+.+.+.+.|+||..++..
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 4578999999999999999999999999999999877531 2456778999999887743
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.012 Score=60.20 Aligned_cols=76 Identities=22% Similarity=0.256 Sum_probs=57.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC-CC-eEEEEeCCCC----CH-----------------------------------H
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE-DA-TVSIVHSRTK----NP-----------------------------------E 276 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~-gA-tVtv~h~~t~----~l-----------------------------------~ 276 (371)
-++|.|||.|- +|.++|..|++. |. +|++++++.. .+ .
T Consensus 18 ~mkIaVIGlG~-mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ 96 (478)
T 3g79_A 18 IKKIGVLGMGY-VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDF 96 (478)
T ss_dssp CCEEEEECCST-THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCG
T ss_pred CCEEEEECcCH-HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcH
Confidence 36899999987 599999999999 99 9999986544 10 2
Q ss_pred hhccCCcEEEEccCCCCccc----C-------------CCcCCCeEEEEeeecCC
Q 017438 277 EITRQADIIISAVGQPNMVR----G-------------SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 277 ~~l~~ADIVIsAvG~p~~v~----~-------------d~ik~gavVIDvgin~~ 314 (371)
+.+++||+||.+++.|.-.. + ..+++|++|||...-+.
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 34678999999999764211 1 23688999999875543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0089 Score=57.32 Aligned_cols=94 Identities=19% Similarity=0.203 Sum_probs=68.2
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHh---------------hccCC
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE---------------ITRQA 282 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~---------------~l~~A 282 (371)
+||.....+..|++.++ -.|.+|+|+|+|. +|..+++++...|++|+...+...+++. ..+.+
T Consensus 158 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~ 235 (348)
T 3two_A 158 LLCAGITTYSPLKFSKV-TKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEEL 235 (348)
T ss_dssp GGTHHHHHHHHHHHTTC-CTTCEEEEESCSH-HHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCE
T ss_pred hhhhHHHHHHHHHhcCC-CCCCEEEEECCcH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCC
Confidence 46665666667766543 3699999999965 6999999999999999887765443321 11257
Q ss_pred cEEEEccCCCCcc--cCCCcCCCeEEEEeeecC
Q 017438 283 DIIISAVGQPNMV--RGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 283 DIVIsAvG~p~~v--~~d~ik~gavVIDvgin~ 313 (371)
|+||.++|.+..+ --+.++++-.++.+|...
T Consensus 236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCC
T ss_pred CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCC
Confidence 8999999987543 236788888899998654
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.014 Score=54.31 Aligned_cols=80 Identities=23% Similarity=0.287 Sum_probs=55.9
Q ss_pred CCCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC-------------CH-------Hhh
Q 017438 235 DIKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK-------------NP-------EEI 278 (371)
Q Consensus 235 ~l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l-------~~~ 278 (371)
+++||+|+|-|. |+-.|..+|..|..+||.|+++++.+. +. .+.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~ 84 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS 84 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHh
Confidence 579999999999 354599999999999999999876421 11 123
Q ss_pred ccCCcEEEEccCCCCc----ccCCCcCC---C--eEEEEeeecCC
Q 017438 279 TRQADIIISAVGQPNM----VRGSWIKP---G--AVIIDVGINPV 314 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~----v~~d~ik~---g--avVIDvgin~~ 314 (371)
....|++|+++|...+ ...+-||+ + ...+.+--||+
T Consensus 85 ~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pd 129 (226)
T 1u7z_A 85 VQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPD 129 (226)
T ss_dssp GGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCC
T ss_pred cCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHH
Confidence 4679999999986543 33445766 2 46677776653
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0053 Score=58.77 Aligned_cols=70 Identities=19% Similarity=0.298 Sum_probs=52.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
--++.|||.|.+ |.+++..|.+.|.+|++++++. .+..+ +.++|+||.++..+
T Consensus 14 ~~kI~iIG~G~m-G~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSW-GTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ 91 (335)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG
T ss_pred CCcEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH
Confidence 357999999885 9999999999999999998752 12344 67899999999853
Q ss_pred Cc--ccCCCcC-CCeEEEEee
Q 017438 293 NM--VRGSWIK-PGAVIIDVG 310 (371)
Q Consensus 293 ~~--v~~d~ik-~gavVIDvg 310 (371)
.+ +- +.++ ++.+||++.
T Consensus 92 ~~~~v~-~~l~~~~~~vv~~~ 111 (335)
T 1z82_A 92 YIREHL-LRLPVKPSMVLNLS 111 (335)
T ss_dssp GHHHHH-TTCSSCCSEEEECC
T ss_pred HHHHHH-HHhCcCCCEEEEEe
Confidence 22 11 1133 788999986
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0026 Score=55.32 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=45.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCC------------------CC---HHhh--ccCCcEEEEc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT------------------KN---PEEI--TRQADIIISA 288 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t------------------~~---l~~~--l~~ADIVIsA 288 (371)
..++.+++++|+|.|.+ |+.++..|.+. |..|+++.++. .+ +.+. +.++|+||.+
T Consensus 34 ~~~~~~~~v~IiG~G~~-G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 34 LINPGHAQVLILGMGRI-GTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp CBCCTTCSEEEECCSHH-HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CcCCCCCcEEEECCCHH-HHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 34677889999999775 99999999998 99999997652 11 2333 6788999998
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
++.+
T Consensus 113 ~~~~ 116 (183)
T 3c85_A 113 MPHH 116 (183)
T ss_dssp CSSH
T ss_pred CCCh
Confidence 8854
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0053 Score=53.69 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=44.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH------------------hhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE------------------EITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~------------------~~l~~ADIVIsAvG~p 292 (371)
.+|+|.|+++-+|+.++..|+++|++|+++.|+...+. +.+..+|+||..+|.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 36999999888899999999999999999987642221 4567899999998864
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0084 Score=54.78 Aligned_cols=60 Identities=25% Similarity=0.405 Sum_probs=45.3
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhh---ccCCcEEEEccCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEI---TRQADIIISAVGQ 291 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~---l~~ADIVIsAvG~ 291 (371)
+..+++||+++|.|+++-+|+.++..|+++|++|+++.|+. .++++. +...|+||+.+|.
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 34578999999999998899999999999999999987752 122222 2367888877774
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.002 Score=61.66 Aligned_cols=94 Identities=18% Similarity=0.115 Sum_probs=66.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CHHh--
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEE-- 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l~~-- 277 (371)
||.+..++..+.+..---.|++|+|+|+|+.+|..+++++...|++|+++.++.. ++.+
T Consensus 126 ~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETV 205 (340)
T ss_dssp SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred cchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHH
Confidence 5555666665544333346999999999977899999999999999988865432 2222
Q ss_pred --hc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 278 --IT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 --~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
.+ +..|+||.++|.+... ..+.++++..++.+|..
T Consensus 206 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeec
Confidence 22 2589999999976532 12578898899999864
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0081 Score=56.18 Aligned_cols=56 Identities=20% Similarity=0.280 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH------------------------HhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP------------------------EEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l------------------------~~~l~~ADIVIsAvG~ 291 (371)
++||.++|-|++.=+|+.++..|+++||+|.++.++.+.+ -+...+-||+|+.+|.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 5899999999998889999999999999999998764221 2345667888887774
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0043 Score=57.30 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=33.3
Q ss_pred CCCCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+||.++|-|++ ++ |+.+|..|+++||+|.++.++
T Consensus 2 ~~l~gK~alVTGaa~~~GI-G~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSI-AFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CCCTTCEEEEECCCSTTCH-HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEECC
Confidence 47899999999975 65 999999999999999999876
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0053 Score=61.41 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=55.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCcEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADII 285 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~ADIV 285 (371)
+|.|||.|.+ |.++|..|++.|.+|++++++. .++.+.+++||+|
T Consensus 2 kI~VIG~G~v-G~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 2 RISIFGLGYV-GAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred EEEEECCCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 6899999885 9999999999999999987541 1334567789999
Q ss_pred EEccCCCCc---------cc------CCCcCC---CeEEEEeeecC
Q 017438 286 ISAVGQPNM---------VR------GSWIKP---GAVIIDVGINP 313 (371)
Q Consensus 286 IsAvG~p~~---------v~------~d~ik~---gavVIDvgin~ 313 (371)
|.+++.|.- +. ...+++ |++||+....+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~ 126 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVL 126 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCC
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcC
Confidence 999987652 21 123577 89999875443
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0087 Score=55.38 Aligned_cols=41 Identities=20% Similarity=0.367 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN 274 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~ 274 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++...
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 47 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETD 47 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 46899999999998888999999999999999999876543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0043 Score=58.27 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=35.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+||.++|-|++.=+|+.+|..|+++||+|.+++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 7999999999998888999999999999999999876
|
| >1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.03 Score=54.34 Aligned_cols=178 Identities=15% Similarity=0.073 Sum_probs=117.1
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCH----HHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSE----QEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSI 187 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~----~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i 187 (371)
.++.|-.- .|..---+=..++.++|.++.++.-. +.++ |-+.+.++-|+.- +|+|.+--|- |-..+.+
T Consensus 46 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~-~~s~~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~l 117 (308)
T 1ml4_A 46 ILATLFFE---PSTRTRLSFESAMHRLGGAVIGFAEA-STSSVKKGESLRDTIKTVEQY--CDVIVIRHPK--EGAARLA 117 (308)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEESCG-GGSGGGGTCCHHHHHHHHTTT--CSEEEEEESS--TTHHHHH
T ss_pred EEEEEecC---CCchHHHHHHHHHHHhCCeEEEeCCC-ccccccCCCCHHHHHHHHHHh--CcEEEEecCC--hhHHHHH
Confidence 45554432 24444445678899999998776432 2122 5678888888774 7899988663 3233333
Q ss_pred HhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeE
Q 017438 188 LNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATV 265 (371)
Q Consensus 188 ~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtV 265 (371)
.+.. .+-.+|.|- .+.+.||-+.+=+--++++.-.++|++|++||-+ +-|.+.++..+...|++|
T Consensus 118 a~~~-------~vPVINag~------g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v 184 (308)
T 1ml4_A 118 AEVA-------EVPVINAGD------GSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVEL 184 (308)
T ss_dssp HHTC-------SSCEEEEEE------TTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEE
T ss_pred HHhC-------CCCEEeCcc------CCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEE
Confidence 3221 234456421 1456799888844444444458999999999986 346999999999999999
Q ss_pred EEEeCC---------------------CCCHHhhccCCcEEEEccCCC--------------Cc-ccCCCc---CCCeEE
Q 017438 266 SIVHSR---------------------TKNPEEITRQADIIISAVGQP--------------NM-VRGSWI---KPGAVI 306 (371)
Q Consensus 266 tv~h~~---------------------t~~l~~~l~~ADIVIsAvG~p--------------~~-v~~d~i---k~gavV 306 (371)
+++.-. +.++++.+++||+|.+-.-.. .+ |+.+.+ +|+++|
T Consensus 185 ~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~ 264 (308)
T 1ml4_A 185 YLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRI 264 (308)
T ss_dssp EEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEE
T ss_pred EEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEE
Confidence 998532 246778999999999755311 23 566655 678887
Q ss_pred EEee
Q 017438 307 IDVG 310 (371)
Q Consensus 307 IDvg 310 (371)
.=++
T Consensus 265 mH~l 268 (308)
T 1ml4_A 265 MHPL 268 (308)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7665
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0091 Score=56.24 Aligned_cols=59 Identities=7% Similarity=0.055 Sum_probs=47.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------C------HHhhcc--CCcEEEEc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------N------PEEITR--QADIIISA 288 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~------l~~~l~--~ADIVIsA 288 (371)
.+++|++|+|.|+++-+|+.++..|+++|++|+++.+... | +.+.++ ..|+||..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999999999888999999999999999999877421 1 234555 88999988
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|..
T Consensus 96 A~~~ 99 (330)
T 2pzm_A 96 AAAY 99 (330)
T ss_dssp CCCC
T ss_pred CccC
Confidence 8743
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0029 Score=58.84 Aligned_cols=71 Identities=18% Similarity=0.375 Sum_probs=52.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------------CHHhhcc---CCcEEEEcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------NPEEITR---QADIIISAV 289 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------------~l~~~l~---~ADIVIsAv 289 (371)
.+|.|||.|.+ |.+++..|.+.|.+|++++++.. +..+... ++|+||.++
T Consensus 4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAM-GSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHH-HHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 47999999875 99999999999999999987521 1122233 899999999
Q ss_pred CCCCc---cc--CCCcCCCeEEEEee
Q 017438 290 GQPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 290 G~p~~---v~--~d~ik~gavVIDvg 310 (371)
+...+ +. ...++++++|||+.
T Consensus 83 ~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 83 KAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred ccccHHHHHHHHHHhcCCCCEEEEec
Confidence 84321 11 13567899999984
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0088 Score=58.25 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=66.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------------HHh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------------PEE 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------------l~~ 277 (371)
+||.....+..|++.++ -.|.+|+|+|+|. +|..+++++...|++|+.+.+.... +++
T Consensus 176 l~~~~~tA~~al~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~ 253 (369)
T 1uuf_A 176 LLCAGITTYSPLRHWQA-GPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA 253 (369)
T ss_dssp GGTHHHHHHHHHHHTTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred hhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHH
Confidence 35544555666666543 2699999999976 6999999999999998877654211 112
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
....+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 254 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 254 HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC
T ss_pred hhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccC
Confidence 2346899999999876442 3678888888888854
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0062 Score=57.98 Aligned_cols=70 Identities=24% Similarity=0.238 Sum_probs=53.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------------------CCHHhhccCCcEEEEcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------------------~~l~~~l~~ADIVIsAv 289 (371)
.+|.|||.|.+ |..++..|.+.|.+|+++.++. .++++.+.++|+||.++
T Consensus 5 mki~iiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 58999999875 9999999999999999987641 23445577899999999
Q ss_pred CCCCc---cc--CCCcCCCeEEEEe
Q 017438 290 GQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 290 G~p~~---v~--~d~ik~gavVIDv 309 (371)
+.... +. ...++++++||++
T Consensus 84 ~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 84 PAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred CchHHHHHHHHHHHhCCCCCEEEEc
Confidence 86432 21 1346778888887
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0051 Score=56.62 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=52.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHhhccCCcEEEEccCCCCc---c
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEEITRQADIIISAVGQPNM---V 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~~l~~ADIVIsAvG~p~~---v 295 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++... ..+.++++|+||.+++...+ +
T Consensus 2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~ 80 (291)
T 1ks9_A 2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV 80 (291)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHH
Confidence 6899999875 999999999999999999765321 12345689999999986542 1
Q ss_pred c--CCCcCCCeEEEEee
Q 017438 296 R--GSWIKPGAVIIDVG 310 (371)
Q Consensus 296 ~--~d~ik~gavVIDvg 310 (371)
. ...++++++|||+.
T Consensus 81 ~~l~~~l~~~~~vv~~~ 97 (291)
T 1ks9_A 81 KSLASTLPVTTPILLIH 97 (291)
T ss_dssp HHHHTTSCTTSCEEEEC
T ss_pred HHHHhhCCCCCEEEEec
Confidence 1 13567888999973
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0012 Score=64.81 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=54.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhcc----CCcEEEEccCCCC---ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITR----QADIIISAVGQPN---MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~----~ADIVIsAvG~p~---~v~ 296 (371)
-++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++ ++|+||.+++... ++.
T Consensus 8 ~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLI-GGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHH
T ss_pred CCEEEEEeecHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHH
Confidence 367999999886 9999999999999999998763 34455554 4699999998421 121
Q ss_pred C-CCcCCCeEEEEeeec
Q 017438 297 G-SWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~-d~ik~gavVIDvgin 312 (371)
. ...++|++|+|++..
T Consensus 87 ~l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 87 AVHTHAPNNGFTDVVSV 103 (341)
T ss_dssp HHHHHCTTCCEEECCSC
T ss_pred HHHccCCCCEEEEcCCC
Confidence 0 013889999999843
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0044 Score=59.34 Aligned_cols=72 Identities=19% Similarity=0.251 Sum_probs=54.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCCCC---------------------------------CHHh
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSRTK---------------------------------NPEE 277 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~t~---------------------------------~l~~ 277 (371)
.++|.|||.|.+ |.+++..|.+.| .+|++++++.. ++.+
T Consensus 8 ~mkI~iIG~G~m-G~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 8 SKKVCIVGSGNW-GSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp CEEEEEECCSHH-HHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 358999999885 999999999888 89999976432 2334
Q ss_pred hccCCcEEEEccCCCCc---cc--CCCcCCCeEEEEee
Q 017438 278 ITRQADIIISAVGQPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~---v~--~d~ik~gavVIDvg 310 (371)
.++++|+||.++....+ +. ...++++++|||+.
T Consensus 87 ~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~ 124 (354)
T 1x0v_A 87 AAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI 124 (354)
T ss_dssp HHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred HHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence 56789999999975321 11 24578899999985
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0076 Score=54.21 Aligned_cols=37 Identities=35% Similarity=0.602 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 4789999999999989999999999999999999887
|
| >3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.048 Score=53.79 Aligned_cols=191 Identities=15% Similarity=0.223 Sum_probs=110.9
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccC---CC-ceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeC---------C
Q 017438 82 VIDGKAVAKQIRDEITGEVSRMKDAIG---VV-PGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHL---------P 148 (371)
Q Consensus 82 ildGk~la~~i~~~ik~~v~~l~~~~g---~~-P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~l---------p 148 (371)
+|+=+.+.++=.+.|-+..+++|+... .+ -.++.+-.- .|..---.=..+++++|-++.++.- .
T Consensus 26 lLsi~Dls~~ei~~ll~~A~~~k~~~~~~~L~gK~va~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~~~~~ 102 (359)
T 3kzn_A 26 FLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFN---PSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFN 102 (359)
T ss_dssp BSCGGGSCHHHHHHHHHHHHHHHHCCCCCTTTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECHHHHSCCEECS
T ss_pred ccchhhCCHHHHHHHHHHHHHHHhcCCCCcCCCCEEEEEecC---CCccHHHHHHHHHHHcCCCEEecCCCCcccccccc
Confidence 455554544333444444455554321 11 244544332 3444444557789999999876531 1
Q ss_pred CC-----CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCC-----HHHHHhhCCcccccCccCcchhhhhccCCCccccc
Q 017438 149 ED-----TSEQEVLKHISVFNDDPSVHGILVQLPLPCHID-----EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFI 218 (371)
Q Consensus 149 ~~-----v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~-----~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~ 218 (371)
.. -..|.+.+.++-+.. -+++|.+--. +...+ ....++.+.-.-+ +-..|. |+ ...
T Consensus 103 ~~s~~~~~k~Es~~DTarvls~--y~D~iviR~~-~~~~~~~~~~~~~~~~~~a~~~~---vPVIN~-----g~---~~H 168 (359)
T 3kzn_A 103 LGTVMDGDTEEHIAEVARVLGR--YVDLIGVRAF-PKFVDWSKDREDQVLKSFAKYSP---VPVINM-----ET---ITH 168 (359)
T ss_dssp SSCCCCSSCCEEHHHHHHHHHH--HCSEEEEECC-CCSSCHHHHTTCHHHHHHHHHCS---SCEEES-----SS---SCC
T ss_pred ccccccCcccchHHHHHHHHhc--cCcEEEEEcc-ccccchhcchhhHHHHHHHHhCC---CcccCc-----cc---ccC
Confidence 00 122446666666654 3778887532 11100 1122222222112 233453 22 346
Q ss_pred cCCHHH-HHHHHHHhC-CCCCCCEEEEEcC------CcccHHHHHHHhccCCCeEEEEeCC-------------------
Q 017438 219 PCTPKG-CIELLHRYG-FDIKGKRAVVIGR------SNIVGMPAALLLQREDATVSIVHSR------------------- 271 (371)
Q Consensus 219 PcTa~g-vi~lL~~~~-i~l~GK~vvVIG~------s~~VGkpla~lL~~~gAtVtv~h~~------------------- 271 (371)
||=+.+ ++.+.|+.| .+++|++++++|. +.-|.+.+..++...|++|+++.-.
T Consensus 169 PtQaL~Dl~Ti~e~~G~~dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~ 248 (359)
T 3kzn_A 169 PCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAE 248 (359)
T ss_dssp HHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCccccCCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHh
Confidence 887777 666667776 4799999999875 2446888999999999999988643
Q ss_pred -------CCCHHhhccCCcEEEEcc
Q 017438 272 -------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -------t~~l~~~l~~ADIVIsAv 289 (371)
+.++++.+++||+|.+-.
T Consensus 249 ~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 249 SGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hCCCcccccCHHHHhcCCeEEEEEE
Confidence 357788999999998654
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0057 Score=55.95 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=44.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC--------CCHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT--------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t--------~~l~~~l~~ADIVIsAvG~ 291 (371)
..+|.|||.|.+ |.+++..|.+.| ..|++++++. .+..+.++++|+||.++..
T Consensus 4 ~m~i~iiG~G~m-G~~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~ 68 (262)
T 2rcy_A 4 NIKLGFMGLGQM-GSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVKP 68 (262)
T ss_dssp SSCEEEECCSHH-HHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeCH
Confidence 458999999885 999999999888 6899998764 3667788899999999983
|
| >1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0067 Score=61.41 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=47.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-CH-----------------HhhccCCcEEEEccCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NP-----------------EEITRQADIIISAVGQPN 293 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l-----------------~~~l~~ADIVIsAvG~p~ 293 (371)
++++||+|+|||.|.+ |...+..|++.||.|+++..... .+ .+.+..+|+||.++|.|.
T Consensus 8 ~~l~~~~vlVvGgG~v-a~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT 84 (457)
T ss_dssp ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHH
Confidence 5789999999999885 99999999999999999875421 11 234668999999999874
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.01 Score=55.96 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=52.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------- 273 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------- 273 (371)
|.|+.-+..-+ .+++|+|+|.|+++-+|+.++..|+++|.+|+++.+...
T Consensus 11 ~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (351)
T 3ruf_A 11 MSRYEEITQQL-----IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 85 (351)
T ss_dssp CHHHHHHHHHH-----HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE
T ss_pred HHHHhhHHhhC-----CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE
Confidence 45555555443 247899999999999999999999999999999877421
Q ss_pred -------CHHhhccCCcEEEEccCC
Q 017438 274 -------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 274 -------~l~~~l~~ADIVIsAvG~ 291 (371)
.+.+.+++.|+||..+|.
T Consensus 86 ~Dl~d~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 86 GDIRDLTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred ccCCCHHHHHHHhcCCCEEEECCcc
Confidence 134567789999988875
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0034 Score=61.17 Aligned_cols=71 Identities=14% Similarity=0.150 Sum_probs=53.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCCCC---------------------------------CHHhh
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSRTK---------------------------------NPEEI 278 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~t~---------------------------------~l~~~ 278 (371)
++|.|||.|.+ |.+++..|.+.| .+|++++++.. ++.+.
T Consensus 22 ~kI~iIGaG~m-G~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 22 LKISILGSGNW-ASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp BCEEEECCSHH-HHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CEEEEECcCHH-HHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 47999999885 999999999888 89999977543 12345
Q ss_pred ccCCcEEEEccCCCC---ccc--CC----CcCCCeEEEEee
Q 017438 279 TRQADIIISAVGQPN---MVR--GS----WIKPGAVIIDVG 310 (371)
Q Consensus 279 l~~ADIVIsAvG~p~---~v~--~d----~ik~gavVIDvg 310 (371)
+++||+||.+++... .+. .. .++++++||++.
T Consensus 101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~ 141 (375)
T 1yj8_A 101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLT 141 (375)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECC
T ss_pred HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeC
Confidence 678999999998422 111 13 678899999984
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0056 Score=54.25 Aligned_cols=55 Identities=11% Similarity=0.184 Sum_probs=44.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCCCC------------------------CHHhhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSRTK------------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~t~------------------------~l~~~l~~ADIVIsAvG~p 292 (371)
.|+|+|.|+++-+|+.++..|+ ++|++|+++.|+.. ++++.++.+|+||+.+|..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 3679999998888999999999 89999999877532 1235677899999988864
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0041 Score=58.46 Aligned_cols=38 Identities=34% Similarity=0.429 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+||.++|-|++.-+|+.+|..|+++||+|.++.++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~ 42 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR 42 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999999999999989999999999999999998765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.006 Score=53.91 Aligned_cols=53 Identities=28% Similarity=0.314 Sum_probs=44.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|.|+++-+|+.++..|+++|++|+++.|+.. ++.+.+++.|+||.++|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 78999999999999999999999999999977521 244667889999988874
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0072 Score=53.42 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=43.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l~~ADIVIsAvG~p 292 (371)
+|+|.|+++-+|+.++..|+++|++|+++.|+.. ++.+.+++.|+||..+|..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 6999999999999999999999999999987621 2345577889999888753
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0051 Score=56.41 Aligned_cols=68 Identities=22% Similarity=0.294 Sum_probs=50.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-C-------------CCHHhhccCCcEEEEccCCCCc---cc--CCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR-T-------------KNPEEITRQADIIISAVGQPNM---VR--GSWI 300 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-t-------------~~l~~~l~~ADIVIsAvG~p~~---v~--~d~i 300 (371)
+|.|||.|.+ |.+++..|.+.|.+|+++++. . .++.+.++++|+||.+++.+.. +. .+.+
T Consensus 2 ~I~iIG~G~m-G~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHH-HHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCcCCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 6899999886 999999999999999997652 1 2344667899999999986532 21 1234
Q ss_pred CCCeEEEEee
Q 017438 301 KPGAVIIDVG 310 (371)
Q Consensus 301 k~gavVIDvg 310 (371)
++ +|||+.
T Consensus 81 ~~--~vi~~s 88 (264)
T 1i36_A 81 RG--IYVDIN 88 (264)
T ss_dssp CS--EEEECS
T ss_pred Cc--EEEEcc
Confidence 55 888885
|
| >4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A | Back alignment and structure |
|---|
Probab=95.98 E-value=0.13 Score=49.79 Aligned_cols=178 Identities=13% Similarity=0.159 Sum_probs=112.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
.++.|-.- .|..---+=..++.++|.++.++.-+.+.+ -|-+.+.++-|..- +|+|.+--|-.. ..+.+-
T Consensus 42 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~lA 114 (306)
T 4ekn_B 42 ILATVFYE---PSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY--ADIIVLRHPSEG--AARLAS 114 (306)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHH--CSEEEEECSSTT--HHHHHH
T ss_pred eEEEEEcC---CChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHh--CcEEEEEcCChH--HHHHHH
Confidence 44444432 354444456788999999988764212221 23355555555542 578888876432 233332
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccC-CCe
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQRE-DAT 264 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~-gAt 264 (371)
+.. .+-.+|.| ..+.+.||-+.+ ++.+.|+.| +++|++|++||-+ +-|.+.++..+... |++
T Consensus 115 ~~~-------~vPVINag------~g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~ 180 (306)
T 4ekn_B 115 EYS-------QVPIINAG------DGSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVE 180 (306)
T ss_dssp HHC-------SSCEEESC------SSSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCE
T ss_pred HhC-------CCCEEeCC------CCCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCE
Confidence 222 13345632 124577998888 555555555 7999999999985 34699999999998 999
Q ss_pred EEEEeCC---------------------CCCHHhhccCCcEEEEccCC----CC----------c-ccCCCcC-CCeEEE
Q 017438 265 VSIVHSR---------------------TKNPEEITRQADIIISAVGQ----PN----------M-VRGSWIK-PGAVII 307 (371)
Q Consensus 265 Vtv~h~~---------------------t~~l~~~l~~ADIVIsAvG~----p~----------~-v~~d~ik-~gavVI 307 (371)
|+++.-. +.++++.+++||+|.+.... +. + |+.+.++ ++++|.
T Consensus 181 v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~~~ai~m 260 (306)
T 4ekn_B 181 MYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIM 260 (306)
T ss_dssp EEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTTCCCEEE
T ss_pred EEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHHHHHhccCcEECHHHHcCCCCEEE
Confidence 9998532 35778889999999976542 11 2 4555443 677776
Q ss_pred Eee
Q 017438 308 DVG 310 (371)
Q Consensus 308 Dvg 310 (371)
=+.
T Consensus 261 H~l 263 (306)
T 4ekn_B 261 HPL 263 (306)
T ss_dssp CCS
T ss_pred CCC
Confidence 655
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0043 Score=63.09 Aligned_cols=71 Identities=21% Similarity=0.287 Sum_probs=54.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhc---cCCcEEEEccCCCCc--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEIT---RQADIIISAVGQPNM-- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l---~~ADIVIsAvG~p~~-- 294 (371)
.+|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.+ +++|+||.+++.+..
T Consensus 3 m~IgvIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~ 81 (482)
T 2pgd_A 3 ADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (482)
T ss_dssp BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CeEEEEChHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHH
Confidence 47999999885 9999999999999999998752 2344544 489999999987532
Q ss_pred --cc--CCCcCCCeEEEEee
Q 017438 295 --VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 295 --v~--~d~ik~gavVIDvg 310 (371)
+. ...+++|.+|||++
T Consensus 82 ~vl~~l~~~l~~g~iII~~s 101 (482)
T 2pgd_A 82 NFIEKLVPLLDIGDIIIDGG 101 (482)
T ss_dssp HHHHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHhhcCCCCEEEECC
Confidence 21 12467899999986
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0052 Score=56.25 Aligned_cols=66 Identities=23% Similarity=0.350 Sum_probs=48.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCcccC--CCc-
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMVRG--SWI- 300 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v~~--d~i- 300 (371)
+|.|||.|.+ |..++..|.+.| ..|++++++. .+..+.+ ++|+||.+++ |..+.. +.+
T Consensus 2 ~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~l~ 78 (263)
T 1yqg_A 2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKNIR 78 (263)
T ss_dssp EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTTCC
T ss_pred EEEEECchHH-HHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHHhc
Confidence 6899999885 999999999989 8999998753 1333456 8999999998 432100 011
Q ss_pred -CCCeEEEEe
Q 017438 301 -KPGAVIIDV 309 (371)
Q Consensus 301 -k~gavVIDv 309 (371)
+ +.+|||+
T Consensus 79 ~~-~~ivv~~ 87 (263)
T 1yqg_A 79 TN-GALVLSV 87 (263)
T ss_dssp CT-TCEEEEC
T ss_pred cC-CCEEEEe
Confidence 3 7888887
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0052 Score=55.55 Aligned_cols=69 Identities=22% Similarity=0.231 Sum_probs=51.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEE-EeCCCC---------------CHHhhccCCcEEEEccCCCCc------c
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSI-VHSRTK---------------NPEEITRQADIIISAVGQPNM------V 295 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv-~h~~t~---------------~l~~~l~~ADIVIsAvG~p~~------v 295 (371)
-+++.|||.|.+ |..++..|.+.|.+|++ ++++.. +..+.+.++|+||.+++.... +
T Consensus 23 mmkI~IIG~G~m-G~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l 101 (220)
T 4huj_A 23 MTTYAIIGAGAI-GSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIADIVTQV 101 (220)
T ss_dssp SCCEEEEECHHH-HHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTC
T ss_pred CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHHHHHHHh
Confidence 368999999885 99999999999999998 665432 223456889999999963221 2
Q ss_pred cCCCcCCCeEEEEee
Q 017438 296 RGSWIKPGAVIIDVG 310 (371)
Q Consensus 296 ~~d~ik~gavVIDvg 310 (371)
.+ + ++.+|||+.
T Consensus 102 ~~--~-~~~ivi~~~ 113 (220)
T 4huj_A 102 SD--W-GGQIVVDAS 113 (220)
T ss_dssp SC--C-TTCEEEECC
T ss_pred hc--c-CCCEEEEcC
Confidence 22 3 588999987
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0075 Score=53.57 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCC--------------------CCHHhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRT--------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.++|+|+|.|+++-+|+.++..|+++ |++|+++.|+. .++.+.+++.|+||..+|.
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 46899999999999999999999999 89999987742 1244567788999988874
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0061 Score=57.24 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=61.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------------HHhh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------------PEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------------l~~~ 278 (371)
||...-.+..|.+.. --.|++|+|+|+++.+|..+++++...|++|+.+.++... +.+.
T Consensus 108 ~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~ 186 (302)
T 1iz0_A 108 PVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKA 186 (302)
T ss_dssp HHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHH
T ss_pred hhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHH
Confidence 333344555665555 3469999999996667999999999999999888764211 1222
Q ss_pred ccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 279 TRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
++.+|+||. +|.+.+ ---+.++++..++.+|..
T Consensus 187 ~~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~ 220 (302)
T 1iz0_A 187 WGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAA 220 (302)
T ss_dssp TTSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC---
T ss_pred hcCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCC
Confidence 356899999 987432 123567888888888864
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.016 Score=47.04 Aligned_cols=54 Identities=20% Similarity=0.319 Sum_probs=41.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CH---H-hhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NP---E-EITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l---~-~~l~~ADIVIsAvG~p 292 (371)
+++++|+|.|. +|+.++..|.+.|..|+++.++.. +. . ..+.++|+||.+++.+
T Consensus 4 ~m~i~IiG~G~-iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGIGR-VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 57899999977 599999999999999999976421 11 1 1256889999998864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0057 Score=58.14 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=66.4
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHh--
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEE-- 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~-- 277 (371)
||.+..+...+.+..---.|++|+|+|+++.+|..+++++...|++|+++.++. .++.+
T Consensus 122 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~ 201 (325)
T 3jyn_A 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRV 201 (325)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred hhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 455555666665543334699999999666679999999999999998876531 22222
Q ss_pred --hc--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecC
Q 017438 278 --IT--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 278 --~l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~ 313 (371)
.+ +..|+||.++|.+.+ ---+.++++..++.+|...
T Consensus 202 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 202 LELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp HHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTT
T ss_pred HHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCC
Confidence 22 358999999997433 1236788999999998653
|
| >2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.031 Score=54.04 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=112.9
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
.|..---+=..++.++|-++.++.-... ..-|-+.+.++-|+.- +|+|.+--|- .. .++.+.-.- .+
T Consensus 55 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~~-~~~~la~~~---~v 123 (301)
T 2ef0_A 55 PSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERF--VEGIAARVFR-----HE-TVEALARHA---KV 123 (301)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTT--CSEEEEECSS-----HH-HHHHHHHHC---SS
T ss_pred CCcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHh--CCEEEEecCC-----hH-HHHHHHHHC---CC
Confidence 4554444667899999999988763210 1124577888888774 6888887652 22 222332111 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.| .+...||-+.+ ++.+.|+.| .++|++++++|-++-|.+.++..|...|++|+++.-.
T Consensus 124 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~ 195 (301)
T 2ef0_A 124 PVVNAL-------SDRAHPLQALADLLTLKEVFG-GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGL 195 (301)
T ss_dssp CEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHH
T ss_pred CEEeCC-------CCccCchHHHHHHHHHHHHhC-CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHH
Confidence 456632 24567998888 555555554 7999999999997778999999999999999998633
Q ss_pred --------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCCc---CCCeEEEEee
Q 017438 272 --------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 --------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~i---k~gavVIDvg 310 (371)
+.++++.+++||+|.+-. |.. .+ |+.+.+ ||+++|.=.+
T Consensus 196 ~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHpl 261 (301)
T 2ef0_A 196 LKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCL 261 (301)
T ss_dssp HHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECS
T ss_pred HhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCC
Confidence 356788999999999633 221 12 444433 6788888766
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0053 Score=56.43 Aligned_cols=55 Identities=16% Similarity=0.122 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------CHHhhccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|+|.|+++-+|+.++..|+++|++|+++.+... .+.+.+++.|+||...|.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 5789999999888999999999999999999876531 234567889999988885
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.012 Score=56.36 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=65.5
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEE 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~ 277 (371)
+||.....+..|++.++ -.|++|+|+|+++.+|..+++++...|++|+++.++. .++.+
T Consensus 151 l~~~~~ta~~~l~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~ 229 (347)
T 2hcy_A 151 ILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG 229 (347)
T ss_dssp GGTHHHHHHHHHHTTTC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHH
T ss_pred HhhhHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHH
Confidence 45544445566665533 3699999999966679999999999999998876542 12222
Q ss_pred hcc-----CCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITR-----QADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~-----~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
.++ ..|+||.++|.+..+. -+.++++..++.+|..
T Consensus 230 ~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 230 AVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 222 4799999998754432 3567888888888864
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0061 Score=58.54 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------CHHh---
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------NPEE--- 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~l~~--- 277 (371)
||...-.+..|.+..---.|++|+|+|+++.+|..+++++...|++|+++.++.. ++.+
T Consensus 141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~ 220 (342)
T 4eye_A 141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVR 220 (342)
T ss_dssp TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHH
Confidence 4444555566644433346999999999666799999999999999988766432 2222
Q ss_pred -hc--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecC
Q 017438 278 -IT--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 278 -~l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~ 313 (371)
.+ +.+|+||.++|.+.+ ---+.++++..++.+|...
T Consensus 221 ~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~ 260 (342)
T 4eye_A 221 EATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAA 260 (342)
T ss_dssp HHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC----
T ss_pred HHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEccC
Confidence 22 258999999998643 1235678888888998643
|
| >1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.005 Score=64.03 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=79.0
Q ss_pred ccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc----CCC-------eEEEEeCC-----------
Q 017438 214 EPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR----EDA-------TVSIVHSR----------- 271 (371)
Q Consensus 214 ~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~----~gA-------tVtv~h~~----------- 271 (371)
..+-.-+|-.|++..|+-.+.+++..++|+.|+|.+ |-.++.+|.. .|. .+++|+++
T Consensus 258 iqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaA-g~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~ 336 (555)
T 1gq2_A 258 IQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLT 336 (555)
T ss_dssp THHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCC
T ss_pred cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCch
Confidence 334334566789999999999999999999999987 9999999887 673 68999764
Q ss_pred ------------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 ------------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 ------------t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ ++|++|...+.|+.+++|||+ +.-+|+=+. ||.
T Consensus 337 ~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 398 (555)
T 1gq2_A 337 PEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALS-NPT 398 (555)
T ss_dssp TTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred HHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 135888888 599999999889999999885 566777666 543
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0087 Score=58.04 Aligned_cols=55 Identities=20% Similarity=0.241 Sum_probs=44.9
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG 290 (371)
..+|+|||+|. +|.+++..|+..|. +|+++.+. |.++++.+++||+||.++|
T Consensus 9 ~~kI~VIGaG~-vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 9 RKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 35899999966 69999999998886 88887543 2467678999999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 88 ~p~ 90 (331)
T 1pzg_A 88 LTK 90 (331)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0099 Score=55.37 Aligned_cols=39 Identities=28% Similarity=0.382 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP 67 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999999988889999999999999999998764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0072 Score=55.28 Aligned_cols=38 Identities=37% Similarity=0.577 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD 45 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999998765
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.012 Score=59.01 Aligned_cols=123 Identities=16% Similarity=0.218 Sum_probs=70.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---CHHhhccCCcEEEEccCCCCcccCCCcCC--CeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---NPEEITRQADIIISAVGQPNMVRGSWIKP--GAVIIDV 309 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---~l~~~l~~ADIVIsAvG~p~~v~~d~ik~--gavVIDv 309 (371)
+++||+|.|||.|++ |.++|.+|.++|++|+++..+.. ...+.+++..|-|. .|.. ..+.+.. ..+|+--
T Consensus 6 ~~~~k~v~viG~G~s-G~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~-~g~~---~~~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 6 TFENKKVLVLGLARS-GEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV-CGSH---PLELLDEDFCYMIKNP 80 (451)
T ss_dssp TTTTCEEEEECCTTT-HHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE-ESCC---CGGGGGSCEEEEEECT
T ss_pred hcCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE-ECCC---hHHhhcCCCCEEEECC
Confidence 578999999999997 99999999999999999987542 11222322222221 1110 0011111 2344433
Q ss_pred eecCCCCCC----CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 310 GINPVEDAK----SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 310 gin~~~~~~----~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
|+++.. |. ...|-++++++++-.-.... .+--|-|--|.-|+.-|+.++++.+
T Consensus 81 gi~~~~-p~~~~a~~~gi~v~~~~e~~~~~~~~-~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 81 GIPYNN-PMVKKALEKQIPVLTEVELAYLVSES-QLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp TSCTTS-HHHHHHHHTTCCEECHHHHHHHHCCS-EEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred cCCCCC-hhHHHHHHCCCcEEeHHHHHHHhcCC-CEEEEECCCCHHHHHHHHHHHHHhc
Confidence 443210 00 00233577776652211111 2223668889999999999988764
|
| >1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0053 Score=64.33 Aligned_cols=94 Identities=14% Similarity=0.180 Sum_probs=76.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc----CCC-------eEEEEeCC----------------
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR----EDA-------TVSIVHSR---------------- 271 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~----~gA-------tVtv~h~~---------------- 271 (371)
-+|-.|++..|+-.+.+|+..++|+.|+|.+ |-.+|.+|.. .|. .+++|+++
T Consensus 301 ~V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~ 379 (605)
T 1o0s_A 301 SVIVAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQ 379 (605)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTT
T ss_pred HHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHH
Confidence 3455789999999999999999999999987 9999999887 784 58999764
Q ss_pred -------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 -------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 -------t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ ++|++|...+.|+.+++|||+ +.-+|+=+. ||.
T Consensus 380 ~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 436 (605)
T 1o0s_A 380 FAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS-NPT 436 (605)
T ss_dssp TCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred HHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 135888888 599999999989999999885 566777666 443
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0062 Score=56.47 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------CH------H-------hhccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------NP------E-------EITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------~l------~-------~~l~~ADIVIsAvG~ 291 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.. |+ + +....-|+||+.+|.
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 104 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV 104 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 589999999999988999999999999999999877532 11 1 122368999998885
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0073 Score=54.35 Aligned_cols=57 Identities=9% Similarity=0.173 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
..|+|+|.|+++-+|+.++..|+++| ++|+++.|+.. ++++.++.+|+||.+.|.+.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 45899999998888999999999999 89999877521 24456788999998877644
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.014 Score=55.57 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhcc--CCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQR--EDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~--~gAtVtv~h~ 270 (371)
.++++|+|+|.|+++-+|+.++..|++ +|++|+++.+
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 367899999999999999999999999 8999999876
|
| >1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.082 Score=51.39 Aligned_cols=176 Identities=19% Similarity=0.261 Sum_probs=116.0
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
.++.+-.- .|..---+=..++.++|-++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|- . ..+
T Consensus 48 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~-~~~ 115 (315)
T 1pvv_A 48 TLAMIFQK---PSTRTRVSFEVAMAHLGGHALYLNAQ-DLQLRRGETIADTARVLSRY--VDAIMARVYD-----H-KDV 115 (315)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTSEEEEEEGG-GSTTTTTCCHHHHHHHHTTT--CSEEEEECSS-----H-HHH
T ss_pred EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCc-cccCCCCcCHHHHHHHHHHh--CcEEEEecCc-----h-HHH
Confidence 34444432 34333345578899999999887632 21 224577788888774 6889888662 2 222
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEE
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSI 267 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv 267 (371)
+.+.-.-+ +-.+|. + .+.+.||-+.+ ++.+.|+.| +++|++|++||-++-|.+.++..|...|++|++
T Consensus 116 ~~lA~~~~---vPVINa-----~--~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~ 184 (315)
T 1pvv_A 116 EDLAKYAT---VPVING-----L--SDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVV 184 (315)
T ss_dssp HHHHHHCS---SCEEEE-----E--CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCC---CCEEcC-----C--CCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEE
Confidence 33322112 345563 2 23567998888 555555554 799999999999777899999999999999999
Q ss_pred EeCC-------------------------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCCc---CCC
Q 017438 268 VHSR-------------------------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSWI---KPG 303 (371)
Q Consensus 268 ~h~~-------------------------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~i---k~g 303 (371)
+.-. +.++++.+++||+|.+-. |.. .+ |+.+.+ ||+
T Consensus 185 ~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ 264 (315)
T 1pvv_A 185 ATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPD 264 (315)
T ss_dssp ECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTT
T ss_pred ECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCC
Confidence 8532 346778899999999743 321 12 444433 778
Q ss_pred eEEEEee
Q 017438 304 AVIIDVG 310 (371)
Q Consensus 304 avVIDvg 310 (371)
++|.=++
T Consensus 265 ai~mH~l 271 (315)
T 1pvv_A 265 YMFMHCL 271 (315)
T ss_dssp CEEEECS
T ss_pred cEEECCC
Confidence 8888766
|
| >1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.036 Score=54.35 Aligned_cols=168 Identities=14% Similarity=0.106 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..---+=..++.++|.++.++.- .+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+.-.- ++
T Consensus 55 STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~-----~-~~~~~lA~~~---~v 122 (333)
T 1duv_G 55 STRTRCSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGYG-----Q-EIVETLAEYA---SV 122 (333)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECS-SSSCBTTTBCHHHHHHHHTTT--CSEEEEECSC-----H-HHHHHHHHHH---SS
T ss_pred CccHHHHHHHHHHHcCCeEEEECC-ccccCcCCCcHHHHHHHHHHh--CCEEEEEcCC-----c-hHHHHHHHhC---CC
Confidence 433333557889999999988752 221 124578888888774 6899888652 2 2223332111 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHH-hCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHR-YGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~-~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.| .+.+.||=+.+ ++.+.|+ .|.+++|.++++||-+ +-|++.++..+...|++|+++.-.
T Consensus 123 PVINa~-------~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~ 195 (333)
T 1duv_G 123 PVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEA 195 (333)
T ss_dssp CEEESC-------CSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCH
T ss_pred CeEcCC-------CCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCH
Confidence 455632 35677998888 5555555 4548999999999996 557999999999999999998522
Q ss_pred -------------------CCCHHhhccCCcEEEEcc----CCC------------Cc-ccCCCc----CCCeEEEEee
Q 017438 272 -------------------TKNPEEITRQADIIISAV----GQP------------NM-VRGSWI----KPGAVIIDVG 310 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAv----G~p------------~~-v~~d~i----k~gavVIDvg 310 (371)
+.++++.+++||+|.+-+ |.+ .+ |+.+.+ +|+++|.=++
T Consensus 196 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 196 ALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 356778899999999633 321 12 555544 7788888776
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0088 Score=55.45 Aligned_cols=59 Identities=27% Similarity=0.294 Sum_probs=46.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------C------HHhh-------ccCCcEEEEc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------N------PEEI-------TRQADIIISA 288 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~------l~~~-------l~~ADIVIsA 288 (371)
..+++||+|+|.|+++-+|+.++..|+++|++|.++.++.. | +++. ...-|+||+.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n 88 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN 88 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45789999999999988999999999999999999876531 1 1122 2367999988
Q ss_pred cCC
Q 017438 289 VGQ 291 (371)
Q Consensus 289 vG~ 291 (371)
+|.
T Consensus 89 Ag~ 91 (269)
T 3vtz_A 89 AGI 91 (269)
T ss_dssp CCC
T ss_pred CCc
Confidence 885
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0079 Score=54.49 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999889999999999999999998875
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.008 Score=53.94 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999988889999999999999999987753
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.0075 Score=55.74 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999988889999999999999999998764
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.024 Score=54.63 Aligned_cols=93 Identities=18% Similarity=0.256 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEE 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~ 277 (371)
+||.....+..|++.++ -.|++|+|+|+|. +|..+++++...|++|+.+.+... ++.+
T Consensus 161 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~ 238 (360)
T 1piw_A 161 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE 238 (360)
T ss_dssp GGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred hhhhHHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHH
Confidence 45555555666666443 3699999999955 699999999889999888765432 2222
Q ss_pred hc-cCCcEEEEccCC--CCccc--CCCcCCCeEEEEeeec
Q 017438 278 IT-RQADIIISAVGQ--PNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l-~~ADIVIsAvG~--p~~v~--~d~ik~gavVIDvgin 312 (371)
.+ ..+|+||.++|. +..+. -+.++++..++.+|..
T Consensus 239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCC
Confidence 22 368999999998 65543 3567888888888854
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.017 Score=53.76 Aligned_cols=54 Identities=11% Similarity=0.163 Sum_probs=45.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------CHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~l~~~l~~ADIVIsAvG~ 291 (371)
+++|+|.|+++.+|+.++..|+++|.+|+++.|... .+.+.+++.|+||..++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 479999999999999999999999999999987622 144567889999988774
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.0079 Score=55.07 Aligned_cols=37 Identities=32% Similarity=0.419 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999998765
|
| >2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.084 Score=51.12 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..---+=..++.++|.++.++.-. +.+ -|-+.+.++-|+.- +|+|.+--|- .. .++.+.-.- ++
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~~-~~~~lA~~~---~v 117 (307)
T 2i6u_A 50 STRTRFSFELGIAQLGGHAVVVDSG-STQLGRDETLQDTAKVLSRY--VDAIVWRTFG-----QE-RLDAMASVA---TV 117 (307)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEEGG-GSGGGGTCCHHHHHHHHHHH--EEEEEEECSS-----HH-HHHHHHHHC---SS
T ss_pred CcchHHHHHHHHHHcCCeEEEECCc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCC-----hh-HHHHHHhhC---CC
Confidence 4333335578899999999887632 111 13355666665553 6788887652 22 222232111 24
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
-.+|.| .+...||-+.+ ++.+.|+.| +++|++|+++|-+ +-|.+.++..|...|++|+++.-.
T Consensus 118 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~ 189 (307)
T 2i6u_A 118 PVINAL-------SDEFHPCQVLADLQTIAERKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPS 189 (307)
T ss_dssp CEEESC-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHH
T ss_pred CEEcCC-------CCCcCccHHHHHHHHHHHHhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHH
Confidence 455632 24567998888 555555554 7999999999997 567999999999999999998532
Q ss_pred ------------------CCCHHhhccCCcEEEEcc
Q 017438 272 ------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 ------------------t~~l~~~l~~ADIVIsAv 289 (371)
+.++++.+++||+|.+-.
T Consensus 190 ~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 190 VRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp HHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence 346778899999999733
|
| >3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.072 Score=52.61 Aligned_cols=178 Identities=16% Similarity=0.211 Sum_probs=114.9
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHh
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILN 189 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~ 189 (371)
.++.+-.- .|..---.=..++.++|.++.++..... -.-|-+.+.++-|..- +++|.+--| .| .. ++
T Consensus 68 ~va~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~--~D~IviR~~--~~---~~-~~ 136 (353)
T 3sds_A 68 TVAMMFSK---RSTRTRVSTEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSM--VSCIVARVG--PH---SD-IA 136 (353)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTS--CSEEEEECS--SH---HH-HH
T ss_pred EEEEEecC---CchhHHHHHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHh--cCEEEEEeC--Ch---HH-HH
Confidence 44544443 3444444567889999999977643211 0124577778777774 788988755 22 22 22
Q ss_pred hCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC------------CCCCCEEEEEcCCcccHHHHHH
Q 017438 190 AVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF------------DIKGKRAVVIGRSNIVGMPAAL 256 (371)
Q Consensus 190 ~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i------------~l~GK~vvVIG~s~~VGkpla~ 256 (371)
.+...- ++-.+|.| .+.+.||=+.+ ++.+.|+.|- .++|++|++||-++-|.+.++.
T Consensus 137 ~lA~~s---~vPVINag-------~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~ 206 (353)
T 3sds_A 137 NLAKHS---SVPVINAL-------CDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAI 206 (353)
T ss_dssp HHHHHC---SSCEEEEE-------CSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHH
T ss_pred HHHhhC---CCCEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHH
Confidence 221111 23456653 13567998887 5666666653 2599999999999999999999
Q ss_pred HhccCCCeEEEEeCC---------------------------CCCHHhhccCCcEEEEcc----CCC-----------Cc
Q 017438 257 LLQREDATVSIVHSR---------------------------TKNPEEITRQADIIISAV----GQP-----------NM 294 (371)
Q Consensus 257 lL~~~gAtVtv~h~~---------------------------t~~l~~~l~~ADIVIsAv----G~p-----------~~ 294 (371)
+|...|++|+++.-. +.++++.+++||+|++-+ |.. .+
T Consensus 207 ~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y 286 (353)
T 3sds_A 207 AATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDF 286 (353)
T ss_dssp HHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCc
Confidence 999999999998522 136778899999999754 421 13
Q ss_pred -ccCCC-----cCCCeEEEEee
Q 017438 295 -VRGSW-----IKPGAVIIDVG 310 (371)
Q Consensus 295 -v~~d~-----ik~gavVIDvg 310 (371)
|+.+. .+++++|.=++
T Consensus 287 ~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 287 KVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CBCHHHHHHHTCCTTCEEEECS
T ss_pred eecHHHHhhcccCCCcEEECCC
Confidence 55554 36788887776
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.006 Score=62.18 Aligned_cols=73 Identities=23% Similarity=0.332 Sum_probs=54.9
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQAD 283 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~AD 283 (371)
..+|.|||.|- +|.++|..|++.|.+|++++++. .++++.+++||
T Consensus 8 ~~~I~VIG~G~-vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 8 SMNLTIIGSGS-VGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CceEEEECcCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 45899999987 59999999999999999997641 12334567899
Q ss_pred EEEEccCCC---------Cccc------CCCcCCCeEEEEeee
Q 017438 284 IIISAVGQP---------NMVR------GSWIKPGAVIIDVGI 311 (371)
Q Consensus 284 IVIsAvG~p---------~~v~------~d~ik~gavVIDvgi 311 (371)
+||.+++.| ..+. ...+++|++||+...
T Consensus 87 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 87 VQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 999999886 2221 124688999988753
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.014 Score=53.14 Aligned_cols=57 Identities=23% Similarity=0.351 Sum_probs=45.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------C------HHhhc-------cCCcEEEEccC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------N------PEEIT-------RQADIIISAVG 290 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~------l~~~l-------~~ADIVIsAvG 290 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. | +++.+ ...|+||+.+|
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag 83 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG 83 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 578999999999988999999999999999999876521 1 12222 26799998888
Q ss_pred C
Q 017438 291 Q 291 (371)
Q Consensus 291 ~ 291 (371)
.
T Consensus 84 ~ 84 (250)
T 2fwm_X 84 I 84 (250)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0069 Score=54.26 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999999999999999998775
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.02 Score=55.45 Aligned_cols=93 Identities=25% Similarity=0.275 Sum_probs=60.2
Q ss_pred cCCHHHHHHHHHHhCC----CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC------------------CCCHH
Q 017438 219 PCTPKGCIELLHRYGF----DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------------------TKNPE 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i----~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------------------t~~l~ 276 (371)
||.....+..|.+..- --.|++|+|+|+++.+|..+++++...|++|+.+.+. ..++.
T Consensus 161 ~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~ 240 (375)
T 2vn8_A 161 PYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVE 240 (375)
T ss_dssp HHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHH
T ss_pred HHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHH
Confidence 4433444455543222 2469999999976667999999999999988766532 12222
Q ss_pred hhc---cCCcEEEEccCCC-Cccc--CCCcCCCeEEEEeee
Q 017438 277 EIT---RQADIIISAVGQP-NMVR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 277 ~~l---~~ADIVIsAvG~p-~~v~--~d~ik~gavVIDvgi 311 (371)
+.+ ..+|+||.++|.+ ..+. -+.++++-.++.+|.
T Consensus 241 ~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 241 EQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp HHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred HHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCC
Confidence 222 3579999888876 2222 245788878888874
|
| >3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.088 Score=51.02 Aligned_cols=169 Identities=14% Similarity=0.124 Sum_probs=111.3
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++. +.+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+...- +
T Consensus 46 ~STRTR~SFe~A~~~LGg~~i~l~-~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~-~~~~~lA~~~---~ 113 (307)
T 3tpf_A 46 NSTRTRMAFELAITELGGKALFLS-SNDLQLSRGEPVKDTARVIGAM--VDFVMMRVNK-----H-ETLLEFARYS---K 113 (307)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEC-TTTCCTTTSSCHHHHHHHHHHH--SSEEEEECSC-----H-HHHHHHHHHC---S
T ss_pred CCcchHHhHHHHHHHcCCeEEEcC-cccccCCCCCCHHHHHHHHHHh--CCEEEEecCC-----h-HHHHHHHHhC---C
Confidence 344444456788999999988765 2221 124466666666653 6889887652 2 2222232211 2
Q ss_pred cCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC-CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK-GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~-GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
+-.+|.| .+.+.||=+.+=+--++++.-+++ |++|++||-++-|.+.++..|...|++|+++.-.
T Consensus 114 vPVINag-------~~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 186 (307)
T 3tpf_A 114 APVINAL-------SELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPE 186 (307)
T ss_dssp SCEEEEE-------CSSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHH
T ss_pred CCEEeCC-------CCCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHH
Confidence 3455643 235679988884444444445799 9999999999889999999999999999998532
Q ss_pred ------------------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCCc---CCCeEEEEee
Q 017438 272 ------------------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 ------------------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~i---k~gavVIDvg 310 (371)
+.++++.+++||+|.+-+ |.. .+ |+.+.+ +++++|.=++
T Consensus 187 ~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 187 IWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp HHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 246778899999999765 321 12 555543 6788887766
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0085 Score=59.45 Aligned_cols=71 Identities=24% Similarity=0.312 Sum_probs=53.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------CCHHhhccCCcEEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------KNPEEITRQADIIIS 287 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------~~l~~~l~~ADIVIs 287 (371)
+|.|||.|. +|.+++..|++ |.+|++++++. .+..+.+++||+||.
T Consensus 2 kI~VIG~G~-vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 2 KIAVAGSGY-VGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp EEEEECCSH-HHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred EEEEECCCH-HHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 689999987 59999999998 99999997641 123455678999999
Q ss_pred ccCCCC----------ccc------CCCcCCCeEEEEeeecC
Q 017438 288 AVGQPN----------MVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 288 AvG~p~----------~v~------~d~ik~gavVIDvgin~ 313 (371)
+++.|. .+. .. +++|++||+...++
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~ 120 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIP 120 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCC
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCC
Confidence 999872 111 12 67899999855544
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0034 Score=55.03 Aligned_cols=91 Identities=18% Similarity=0.237 Sum_probs=58.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH----hhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE----EIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~----~~l 279 (371)
.-.+..|.+..---.|++|+|+|+++-+|..++.++...|++|+++.++. .+.. +.+
T Consensus 24 ~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELT 103 (198)
T ss_dssp HHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHh
Confidence 33444554432223699999999755579999999999999998876541 1111 112
Q ss_pred --cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecC
Q 017438 280 --RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~ 313 (371)
...|+||.++|.+.+ ---+.++++..++.+|...
T Consensus 104 ~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 104 DGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp TTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGG
T ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 247999988874221 1124578888888888643
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0058 Score=58.14 Aligned_cols=95 Identities=18% Similarity=0.132 Sum_probs=64.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~ 278 (371)
||...-.+..|.+..---.|++|+|+|+++.+|..+++++...|++|+.+.++.. ++.+.
T Consensus 131 ~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAG 210 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHH
Confidence 4444555666644333346999999999666799999999999999988865421 22221
Q ss_pred c-----cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecC
Q 017438 279 T-----RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 279 l-----~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~ 313 (371)
+ ...|+||.++|.+.+ ---+.++++-.++.+|...
T Consensus 211 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGG
T ss_pred HHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecc
Confidence 1 247999988886432 1235788888888888643
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.004 Score=59.35 Aligned_cols=94 Identities=17% Similarity=0.167 Sum_probs=64.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh-
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI- 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~- 278 (371)
+|.+...+..+.+..---.|++|+|+|+++.+|..+++++...|++|+++.++. .++.+.
T Consensus 130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQV 209 (334)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHH
T ss_pred hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHH
Confidence 344444555565543334799999999666679999999999999998876641 222222
Q ss_pred ---c--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 279 ---T--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 ---l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
+ +..|+||.++|.+.+ ---++++++-.++.+|..
T Consensus 210 ~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 210 LKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp HHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCT
T ss_pred HHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCC
Confidence 2 258999999997432 123567888889999864
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0089 Score=57.36 Aligned_cols=70 Identities=17% Similarity=0.240 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCCcc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPNMV 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~~v 295 (371)
.-|+|.|||.|.+ |.++|..|+ .|.+|++++++. .++++ +++||+||.+++...-+
T Consensus 11 ~~~~V~vIG~G~M-G~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 11 HHMKVFVIGAGLM-GRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp -CCEEEEECCSHH-HHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred CCCeEEEEeeCHH-HHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 5799999999886 999999999 999999998753 23333 78999999999854322
Q ss_pred cC------CCcCCCeEEE-Eee
Q 017438 296 RG------SWIKPGAVII-DVG 310 (371)
Q Consensus 296 ~~------d~ik~gavVI-Dvg 310 (371)
+. +-+ +|++++ |.+
T Consensus 88 k~~l~~~l~~~-~~~IlasntS 108 (293)
T 1zej_A 88 KVEVLREVERL-TNAPLCSNTS 108 (293)
T ss_dssp HHHHHHHHHTT-CCSCEEECCS
T ss_pred HHHHHHHHhcC-CCCEEEEECC
Confidence 21 223 888875 443
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0087 Score=54.46 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999888999999999999999999876
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0079 Score=52.37 Aligned_cols=53 Identities=23% Similarity=0.350 Sum_probs=42.3
Q ss_pred CC-EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------CHHhhcc---CCcEEEEccCC
Q 017438 238 GK-RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------NPEEITR---QADIIISAVGQ 291 (371)
Q Consensus 238 GK-~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------~l~~~l~---~ADIVIsAvG~ 291 (371)
|| +++|.|+++-+|+.++..|+ +|++|+++.|+.. .+++.+. ..|+||..+|.
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~ 68 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGS 68 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 66 89999999999999999999 9999999987631 1233333 47999988884
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0073 Score=57.27 Aligned_cols=92 Identities=20% Similarity=0.209 Sum_probs=64.3
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC------------------CCCC-HHhhc
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS------------------RTKN-PEEIT 279 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~------------------~t~~-l~~~l 279 (371)
||...-.+..|+..++ -.|.+|+|+|+++.+|..+++++...|++|+...+ +..+ +.+.+
T Consensus 135 ~~~~~ta~~al~~~~~-~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 135 PTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS 213 (321)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCC
T ss_pred hhHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhc
Confidence 5444445555644433 46999999985556799999999999998876533 2334 66667
Q ss_pred cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 280 RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
+.+|+||.++|.+.+ -.-+.++++-.++.+|.
T Consensus 214 ~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 214 TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCS
T ss_pred cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCC
Confidence 788999999997554 12356788888888874
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0085 Score=57.25 Aligned_cols=75 Identities=16% Similarity=0.357 Sum_probs=52.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------CCHHhhccCCcEE
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------KNPEEITRQADII 285 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------~~l~~~l~~ADIV 285 (371)
+++...++|.|||+|.+ |..++..|.+.|.+|+++ ++. .++ +.+..+|+|
T Consensus 14 ~~~~~~~kI~IiGaGa~-G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v 90 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAV-GCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLV 90 (318)
T ss_dssp ------CEEEEESCSHH-HHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEE
T ss_pred hhhccCCcEEEECcCHH-HHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEE
Confidence 45567889999999885 999999999999999998 442 122 235789999
Q ss_pred EEccCCCCc---cc--CCCcCCCeEEEEee
Q 017438 286 ISAVGQPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 286 IsAvG~p~~---v~--~d~ik~gavVIDvg 310 (371)
|.++....+ +. ...++++++|+.+-
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeC
Confidence 999986542 11 24577888888763
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0078 Score=54.13 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999989999999999999999998765
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.015 Score=55.69 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=66.3
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCC-------------------CC---
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT-------------------KN--- 274 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t-------------------~~--- 274 (371)
+||.....+..|++.++ -.|++|+|+|+|+.+|..+++++... |++|+++.++. .+
T Consensus 152 l~~~~~ta~~~l~~~~~-~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 230 (347)
T 1jvb_A 152 LTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLA 230 (347)
T ss_dssp GGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred chhhHHHHHHHHHhcCC-CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHH
Confidence 45654555666665433 36999999999966799999999998 99998876531 12
Q ss_pred -HHhhc--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 275 -PEEIT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 275 -l~~~l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+.. ...|+||.++|.+..+. -+.++++-.++.+|..
T Consensus 231 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 231 EIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp HHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred HHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 22333 36899999999764332 3567888888888854
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.009 Score=54.14 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 41 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR 41 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 57899999999999999999999999999999987653
|
| >1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.058 Score=52.70 Aligned_cols=176 Identities=17% Similarity=0.197 Sum_probs=114.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
.++.+-.- .|..---+=..++.++|.++.++.- .+. .-|-+.+.++-|+.- +|+|.+--|- .. .+
T Consensus 60 ~la~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~-----~~-~~ 127 (325)
T 1vlv_A 60 TLAMIFEK---RSTRTRLAFETAFAEEGGHPIFLSP-NDIHLGAKESLEDTARVLGRM--VDAIMFRGYK-----QE-TV 127 (325)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECT-TTCCTTTSSCHHHHHHHHHTT--CSEEEEESSC-----HH-HH
T ss_pred EEEEEecc---CCcchHHHHHHHHHHcCCeEEEECC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCC-----hH-HH
Confidence 34444432 4554444667899999999887753 222 124577788877774 6889888662 22 22
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEE
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVS 266 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVt 266 (371)
+.+.-.-+ +-.+|. + .+...||=+.+ ++.+.|+.| +++|++++++|-+ +-|.+.++..|...|++|+
T Consensus 128 ~~lA~~~~---vPVINa-----~--~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~ 196 (325)
T 1vlv_A 128 EKLAEYSG---VPVYNG-----L--TDEFHPTQALADLMTIEENFG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFV 196 (325)
T ss_dssp HHHHHHHC---SCEEES-----C--CSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhCC---CCEEeC-----C--CCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEE
Confidence 22321112 345563 2 23567998888 555555554 7999999999996 5579999999999999999
Q ss_pred EEeCC-------------------------CCCHHhhccCCcEEEEcc----CC----C-------Cc-ccCCCc----C
Q 017438 267 IVHSR-------------------------TKNPEEITRQADIIISAV----GQ----P-------NM-VRGSWI----K 301 (371)
Q Consensus 267 v~h~~-------------------------t~~l~~~l~~ADIVIsAv----G~----p-------~~-v~~d~i----k 301 (371)
++.-. +.++++.+++||+|.+-. |. + .+ |+.+.+ |
T Consensus 197 ~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k 276 (325)
T 1vlv_A 197 ACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGK 276 (325)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCC
T ss_pred EECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccC
Confidence 98522 356778899999999733 21 1 12 444443 7
Q ss_pred CCeEEEEee
Q 017438 302 PGAVIIDVG 310 (371)
Q Consensus 302 ~gavVIDvg 310 (371)
|+++|.=++
T Consensus 277 ~dai~mH~L 285 (325)
T 1vlv_A 277 SETIFMHCL 285 (325)
T ss_dssp TTCEEEECS
T ss_pred CCeEEECCC
Confidence 788887766
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.011 Score=54.66 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=45.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------C------HHhhc-------cCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------N------PEEIT-------RQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------~------l~~~l-------~~ADIVIsAvG~ 291 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. | +++.+ ...|+||+.+|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI 84 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 478999999999999999999999999999999877521 1 12222 268999988884
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.031 Score=56.79 Aligned_cols=84 Identities=23% Similarity=0.323 Sum_probs=66.8
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC---------------CCCHHhhc
Q 017438 224 GCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR---------------TKNPEEIT 279 (371)
Q Consensus 224 gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~---------------t~~l~~~l 279 (371)
=+++.+++...+++|++|.|+|-. +.-...++..|.++|++|.+..-. ..++++.+
T Consensus 319 ~vv~~l~~~~~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~ 398 (444)
T 3vtf_A 319 YAVQLLEERLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALL 398 (444)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHH
T ss_pred HHHHHHHHHccccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHH
Confidence 367777777778999999999964 223667889999999999998643 24677889
Q ss_pred cCCcEEEEccCCCCcccCCCcCCCeEEEEe
Q 017438 280 RQADIIISAVGQPNMVRGSWIKPGAVIIDV 309 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~~d~ik~gavVIDv 309 (371)
++||.||.+|..+.|-..|| ++.+|||.
T Consensus 399 ~~aDavvi~t~h~ef~~ld~--~~~vv~D~ 426 (444)
T 3vtf_A 399 DQVEGVIIATAWPQYEGLDY--RGKVVVDG 426 (444)
T ss_dssp HHCSEEEECSCCGGGGGSCC--TTCEEEES
T ss_pred hCCCEEEEccCCHHHhCCCc--CCCEEEEC
Confidence 99999999999988765565 46799994
|
| >4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.12 Score=50.71 Aligned_cols=162 Identities=10% Similarity=0.106 Sum_probs=105.2
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchh
Q 017438 129 RNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNI 205 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~ 205 (371)
-+=..++.++|.++.++.- .+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+...- ++-.+|.
T Consensus 79 ~SFE~A~~~LGg~~i~l~~-~~ssl~kgEsl~DTarvLs~~--~D~IviR~~~-----~-~~~~~lA~~~---~vPVINa 146 (339)
T 4a8t_A 79 VSFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER-----H-HSIVDLANCA---TIPVING 146 (339)
T ss_dssp HHHHHHHHHTTCEEEEECC-C-CCSSSSSCHHHHHHHHHHH--CSEEEEECSS-----H-HHHHHHHHHC---SSCEEEC
T ss_pred HHHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc-----H-HHHHHHHHhC---CCCEEEC
Confidence 3557789999999987642 211 123455555555553 6788887652 2 2222232211 2344564
Q ss_pred hhhccCCCccccccCCHHH-HHHHHHHh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-----------
Q 017438 206 GRLAMRGREPLFIPCTPKG-CIELLHRY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------- 271 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~g-vi~lL~~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------- 271 (371)
| .+.+.||=+.+ ++.+.|+. |-+++|++|++||-++-|.+.++.+|...|++|+++.-.
T Consensus 147 g-------~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~ 219 (339)
T 4a8t_A 147 M-------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAK 219 (339)
T ss_dssp C-------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHH
T ss_pred C-------CCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHH
Confidence 3 24567998888 55555555 437999999999998889999999999999999998533
Q ss_pred --------------CCCHHhhccCCcEEEEcc----CCCC-------------c-ccCCCc---CCCeEEEEee
Q 017438 272 --------------TKNPEEITRQADIIISAV----GQPN-------------M-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsAv----G~p~-------------~-v~~d~i---k~gavVIDvg 310 (371)
+.+++ .+++||+|.+-+ |... + |+.+.+ +|+++|.=++
T Consensus 220 ~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 220 LAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred HHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 24566 789999999743 3211 2 344433 6788888776
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0086 Score=55.35 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998775
|
| >4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.23 Score=48.06 Aligned_cols=176 Identities=17% Similarity=0.187 Sum_probs=114.1
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
.++.+-.- .|..---+=..++.++|.++.++.- .+. .-|-+.+.++-|..- +|+|.+--|- . ..+
T Consensus 47 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~-~~~ 114 (309)
T 4f2g_A 47 TLAMIFEK---SSTRTRLSFEAGIFQLGGHAVFMST-RDTQLGRGEPVEDSAQVISRM--VDIIMIRTFE-----Q-DII 114 (309)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECC-SSCEETBEECHHHHHHHHHHH--CSEEEEECSC-----H-HHH
T ss_pred eEEEEecC---CChhhHhhHHHHHHHcCCeEEEcCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC-----H-HHH
Confidence 44444432 3444444557789999999887642 221 123466666666553 6788887652 2 222
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEE
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSI 267 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv 267 (371)
+.+...-+ +-.+|.| .+.+.||=+.+ ++.+.|+.| +++|++|++||-++-|.+.++.+|...|++|++
T Consensus 115 ~~lA~~~~---vPVINag-------~~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~ 183 (309)
T 4f2g_A 115 QRFAENSR---VPVINGL-------TNEYHPCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKLQL 183 (309)
T ss_dssp HHHHHTCS---SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHhCC---CCEEECC-------CCccCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEE
Confidence 33322112 3456753 23566998887 555555555 799999999999988999999999999999999
Q ss_pred EeCC-------------------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCC---cCCCeEEEEe
Q 017438 268 VHSR-------------------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSW---IKPGAVIIDV 309 (371)
Q Consensus 268 ~h~~-------------------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~---ik~gavVIDv 309 (371)
+.-. +.++++.+++||+|.+-+ |.. .+ |+.+. .|++++|.=+
T Consensus 184 ~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~ 263 (309)
T 4f2g_A 184 STPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHC 263 (309)
T ss_dssp ECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEEC
T ss_pred ECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECC
Confidence 8521 357888999999999755 321 12 45443 3678888776
Q ss_pred e
Q 017438 310 G 310 (371)
Q Consensus 310 g 310 (371)
+
T Consensus 264 l 264 (309)
T 4f2g_A 264 L 264 (309)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.011 Score=54.70 Aligned_cols=38 Identities=26% Similarity=0.302 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999989999999999999999998775
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0097 Score=54.20 Aligned_cols=37 Identities=35% Similarity=0.478 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999989999999999999999998775
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.012 Score=56.24 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=65.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 278 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~ 278 (371)
+||.....+..|+..++ -.|++|+|+|+|+ +|..+++++...|++|+.+.++. .++.+.
T Consensus 146 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~ 223 (339)
T 1rjw_A 146 IFCAGVTTYKALKVTGA-KPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKF 223 (339)
T ss_dssp GGTHHHHHHHHHHHHTC-CTTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHH
T ss_pred hhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHH
Confidence 45555555666666543 3699999999977 69999999999999988876431 232222
Q ss_pred ----ccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 279 ----TRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 ----l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+..+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 224 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 224 MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp HHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEeccc
Confidence 246899999999754432 2457888888888854
|
| >1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.1 Score=51.13 Aligned_cols=169 Identities=15% Similarity=0.162 Sum_probs=111.0
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++.- .+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+.-.- +
T Consensus 55 ~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~-----~-~~~~~lA~~s---~ 122 (335)
T 1dxh_A 55 TSTRTRCAFEVAAYDQGANVTYIDP-NSSQIGHKESMKDTARVLGRM--YDAIEYRGFK-----Q-EIVEELAKFA---G 122 (335)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECT-TTCCBTTTBCHHHHHHHHHHH--CSEEEEECSC-----H-HHHHHHHHHS---S
T ss_pred CCcchHHHHHHHHHHcCCeEEEECC-ccccCcCCCcHHHHHHHHHhh--CCEEEEecCC-----h-hHHHHHHHhC---C
Confidence 4554444567889999999988752 222 123466666666553 5788887652 2 2223332111 2
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.|.+++|++++++|-+ +-|++.++..+...|++|+++.-.
T Consensus 123 vPVINa~-------~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~ 195 (335)
T 1dxh_A 123 VPVFNGL-------TDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHD 195 (335)
T ss_dssp SCEEEEE-------CSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCH
T ss_pred CCEEcCC-------CCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCH
Confidence 4556632 24567998888 45555544438999999999997 557999999999999999998522
Q ss_pred -------------------CCCHHhhccCCcEEEEcc----CCC------------Cc-ccCCCc----CCCeEEEEee
Q 017438 272 -------------------TKNPEEITRQADIIISAV----GQP------------NM-VRGSWI----KPGAVIIDVG 310 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAv----G~p------------~~-v~~d~i----k~gavVIDvg 310 (371)
+.++++.+++||+|.+-+ |.+ .+ |+.+.+ +|+++|.=+.
T Consensus 196 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 196 EFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 356778899999999633 321 12 555544 7788888776
|
| >4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.064 Score=52.75 Aligned_cols=168 Identities=15% Similarity=0.193 Sum_probs=108.0
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++.- .+.+ -|-+.+.++-|..- +++|.+--|- . ..++.+...-+
T Consensus 80 pSTRTR~SFE~A~~~LGg~vi~l~~-~~ss~~kgEsl~DTarvLs~y--~D~IviR~~~-----~-~~~~~lA~~~~--- 147 (340)
T 4ep1_A 80 HSTRTRVSFEAGMVQLGGHGMFLNG-KEMQMGRGETVSDTAKVLSHY--IDGIMIRTFS-----H-ADVEELAKESS--- 147 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEES-CC------CCTTHHHHHHHHH--CSEEEEECSC-----H-HHHHHHHHHCS---
T ss_pred CCccHHHHHHHHHHHcCCeEEEcCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC-----h-hHHHHHHHhCC---
Confidence 3444444567889999999987652 2211 12345555555543 6788887652 2 22222222112
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.| .++|++|++||-++-|.+.++.+|...|++|+++.-.
T Consensus 148 vPVINag-------~~~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 219 (340)
T 4ep1_A 148 IPVINGL-------TDDHHPCQALADLMTIYEETN-TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEE 219 (340)
T ss_dssp SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHH
T ss_pred CCEEeCC-------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHH
Confidence 3455643 23567998888 555555555 6999999999998889999999999999999998532
Q ss_pred ------------------CCCHHhhccCCcEEEEcc----CCC----------Cc-ccCCCc---CCCeEEEEee
Q 017438 272 ------------------TKNPEEITRQADIIISAV----GQP----------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 ------------------t~~l~~~l~~ADIVIsAv----G~p----------~~-v~~d~i---k~gavVIDvg 310 (371)
+.++++.+++||+|.+-. |.+ .+ |+.+.+ ||+++|.=++
T Consensus 220 ~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 220 IVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp HHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred HHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 246778899999998654 211 12 555443 6788887776
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.011 Score=54.02 Aligned_cols=37 Identities=30% Similarity=0.382 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.012 Score=55.90 Aligned_cols=38 Identities=32% Similarity=0.361 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-.|+||.++|-|++.=+|+.+|..|+++||+|.++.++
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 35899999999998888999999999999999999876
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.0082 Score=54.80 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999998775
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.0099 Score=54.26 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35789999999999999999999999999999998765
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.0085 Score=61.12 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=54.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------------------------CCHHhhccCCc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------------------KNPEEITRQAD 283 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------------------------~~l~~~l~~AD 283 (371)
++|.|||.|.+ |.++|..|++.|.+|++++++. .++ +.+++||
T Consensus 55 ~kVaVIGaG~M-G~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aD 132 (460)
T 3k6j_A 55 NSVAIIGGGTM-GKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCD 132 (460)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCS
T ss_pred CEEEEECCCHH-HHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCC
Confidence 78999999875 9999999999999999997642 233 3578999
Q ss_pred EEEEccCCCC-----ccc--CCCcCCCeEEEEeee
Q 017438 284 IIISAVGQPN-----MVR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 284 IVIsAvG~p~-----~v~--~d~ik~gavVIDvgi 311 (371)
+||.|++... ++. .+.+++++++++...
T Consensus 133 lVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 133 LIVESVIEDMKLKKELFANLENICKSTCIFGTNTS 167 (460)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred EEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCC
Confidence 9999998432 121 245789999987653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.015 Score=53.04 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP 40 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 47899999999999899999999999999999987753
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.011 Score=54.51 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=35.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||+|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999889999999999999999998874
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0073 Score=57.40 Aligned_cols=94 Identities=16% Similarity=-0.014 Sum_probs=62.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~ 278 (371)
+|...-.+..|.+..---.|++|+|.|+++-+|..+++++...|++|+++.++. .++.+.
T Consensus 127 ~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEA 206 (333)
T ss_dssp SHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHH
T ss_pred CChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHH
Confidence 333333445553332234699999999966679999999999999998876531 222222
Q ss_pred c-----cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 279 T-----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l-----~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
+ ...|+||.++|.+.+- --+.+++|..++.+|..
T Consensus 207 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred HHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEecc
Confidence 2 2479999999864321 22567888888888854
|
| >3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.17 Score=48.89 Aligned_cols=169 Identities=16% Similarity=0.144 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..---+=..++.++|.++.++.-. +. .-|-+.+.++-|..- .+++|.+--|-.. ..+.+.+.. ++
T Consensus 47 STRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~-~~D~iviR~~~~~--~~~~la~~~-------~v 115 (304)
T 3r7f_A 47 STRTRFSFEVAEKKLGMNVLNLDGT-STSVQKGETLYDTIRTLESI-GVDVCVIRHSEDE--YYEELVSQV-------NI 115 (304)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEETT-STTSCSSSCHHHHHHHHHHH-TCCEEEEECSSTT--CHHHHHHHC-------SS
T ss_pred ChhHHHhHHHHHHHCCCeEEEECcc-cccCCCCCCHHHHHHHHHHh-cCCEEEEecCChh--HHHHHHHhC-------CC
Confidence 4333335578899999999887531 11 123455555555541 3578998876432 334443322 13
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.| ..+.+.||=+.+ ++.+.|+.| +++|++|++||-+ +-|.+.++..+...|++|+++.-.
T Consensus 116 PVINag------dg~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~ 188 (304)
T 3r7f_A 116 PILNAG------DGCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE 188 (304)
T ss_dssp CEEESC------CTTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT
T ss_pred CEEeCC------CCCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch
Confidence 345642 124567998888 555555555 7999999999986 337999999999999999998532
Q ss_pred -----CCCHHhhccCCcEEEEccCCC----------C----c-ccCCC---cCCCeEEEEee
Q 017438 272 -----TKNPEEITRQADIIISAVGQP----------N----M-VRGSW---IKPGAVIIDVG 310 (371)
Q Consensus 272 -----t~~l~~~l~~ADIVIsAvG~p----------~----~-v~~d~---ik~gavVIDvg 310 (371)
+.++++.+++||+|.+-.... . + |+.+. .+++++|.=++
T Consensus 189 ~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 189 NTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hhcCccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 347889999999999865321 1 1 44443 36788877665
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.008 Score=55.72 Aligned_cols=38 Identities=26% Similarity=0.477 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999889999999999999999998765
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.01 Score=52.13 Aligned_cols=52 Identities=17% Similarity=0.236 Sum_probs=42.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------CHH----hhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------NPE----EITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~l~----~~l~~ADIVIsAvG~ 291 (371)
+|+|.|+++-+|+.++..|+++|++|+++.|+.. |+. +.+...|+||..+|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 6999999888999999999999999999987631 221 456789999988886
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.01 Score=53.82 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN 39 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999889999999999999999998775
|
| >3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.034 Score=54.30 Aligned_cols=168 Identities=16% Similarity=0.233 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---.=..++.++|.++.++.- .+. .-|-+.+.++-|+.- +|+|.+--|- . ..++.+...-+
T Consensus 58 ~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~-----~-~~~~~lA~~~~--- 125 (323)
T 3gd5_A 58 ASTRTRVSFTVAMYQLGGQVIDLSP-SNTQVGRGEPVRDTARVLGRY--VDGLAIRTFA-----Q-TELEEYAHYAG--- 125 (323)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEC-----------CCHHHHHHHHTTT--CSEEEEECSS-----H-HHHHHHHHHHC---
T ss_pred CCcchHhhHHHHHHHcCCeEEEeCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC-----h-hHHHHHHHhCC---
Confidence 3444444567889999999876532 111 234578888888874 8899988662 2 22222222112
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.| +++|++|++||-++-|.+.++.++...|++|+++.-.
T Consensus 126 vPVINag-------~~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 197 (323)
T 3gd5_A 126 IPVINAL-------TDHEHPCQVVADLLTIRENFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPA 197 (323)
T ss_dssp SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHH
T ss_pred CCEEeCC-------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHH
Confidence 3445643 24567998888 555556655 7999999999998889999999999899999998532
Q ss_pred ------------------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCCc---CCCeEEEEee
Q 017438 272 ------------------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 ------------------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~i---k~gavVIDvg 310 (371)
+.++++.+++||+|.+-. |.. .+ |+.+.+ +++++|.=++
T Consensus 198 ~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 198 VSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp HHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred HHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 246778899999999654 321 12 444433 6788887766
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.018 Score=53.68 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 358999999999998899999999999999999998764
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.012 Score=53.82 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999889999999999999999998765
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.017 Score=55.87 Aligned_cols=54 Identities=30% Similarity=0.482 Sum_probs=43.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------------CCHHhhccCCcEEEEccC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG 290 (371)
.++|+|||+|. +|.++|..|+..|. +|+++.... .++ +.+++||+||.++|
T Consensus 14 ~~kI~ViGaG~-vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQ-IGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 46899999966 59999999999987 888876542 344 67899999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 92 ~p~ 94 (328)
T 2hjr_A 92 VPR 94 (328)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.014 Score=52.51 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 3689999999999899999999999999999988764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.019 Score=52.84 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 55 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG 55 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999999999999999999999999988763
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.012 Score=55.59 Aligned_cols=39 Identities=23% Similarity=0.431 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 578999999999998899999999999999999998764
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=95.58 E-value=0.0087 Score=54.65 Aligned_cols=38 Identities=32% Similarity=0.377 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999998888999999999999999998775
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0074 Score=53.93 Aligned_cols=57 Identities=21% Similarity=0.237 Sum_probs=44.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-C------HHh---hccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-N------PEE---ITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~------l~~---~l~~ADIVIsAvG~ 291 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++.. | +++ .+..-|++|+.+|.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~ 69 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGS 69 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 468999999999988999999999999999999876531 1 222 23467999988884
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.01 Score=55.00 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999998775
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.011 Score=54.60 Aligned_cols=39 Identities=10% Similarity=0.195 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence 468999999999999999999999999999999987753
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0085 Score=53.87 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999998775
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.01 Score=55.29 Aligned_cols=37 Identities=30% Similarity=0.278 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999998765
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.0087 Score=54.06 Aligned_cols=39 Identities=31% Similarity=0.418 Sum_probs=35.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||+|+|.|+++-+|+.++..|+++|++|+++.++
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 457899999999999989999999999999999999876
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.011 Score=54.23 Aligned_cols=37 Identities=24% Similarity=0.487 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999998775
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.0091 Score=60.75 Aligned_cols=74 Identities=20% Similarity=0.425 Sum_probs=54.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCC---------------------------------CCHHhhccCCc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRT---------------------------------KNPEEITRQAD 283 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t---------------------------------~~l~~~l~~AD 283 (371)
.+|.|||.|.+ |.++|..|++. |.+|++++++. .++.+.+++||
T Consensus 10 mkI~VIG~G~v-G~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYV-GGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 58999999884 99999999988 68999997541 12235567899
Q ss_pred EEEEccCCCCc--------------cc------CCCcCCCeEEEEeeecC
Q 017438 284 IIISAVGQPNM--------------VR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 284 IVIsAvG~p~~--------------v~------~d~ik~gavVIDvgin~ 313 (371)
+||.+++.|.- +. ...+++|++|||....+
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 99999987631 11 12467899999965443
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0099 Score=54.84 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999999999999999999999998775
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.02 Score=55.00 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=46.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC-----------------C------HHhhccCCcEEEEccC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-----------------N------PEEITRQADIIISAVG 290 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~-----------------~------l~~~l~~ADIVIsAvG 290 (371)
.+++++|+|.|+++-+|+.++..|+++| ++|+++.+... | +.+.++..|+||..+|
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 4789999999999999999999999999 99999876421 1 2345678899998887
Q ss_pred CC
Q 017438 291 QP 292 (371)
Q Consensus 291 ~p 292 (371)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 43
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.011 Score=54.30 Aligned_cols=37 Identities=24% Similarity=0.235 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999998775
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.015 Score=54.27 Aligned_cols=58 Identities=12% Similarity=0.217 Sum_probs=45.7
Q ss_pred CCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC---------------C-------HHhh
Q 017438 237 KGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK---------------N-------PEEI 278 (371)
Q Consensus 237 ~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~-------l~~~ 278 (371)
+||+|+|-|. ||-.|..+|..|..+||.|+++++.+. . +.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence 5899999998 675699999999999999999987532 1 1134
Q ss_pred ccCCcEEEEccCCCCc
Q 017438 279 TRQADIIISAVGQPNM 294 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~ 294 (371)
...+|++|.+++...+
T Consensus 82 ~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 82 VQDYQVLIHSMAVSDY 97 (232)
T ss_dssp GGGCSEEEECSBCCSE
T ss_pred cCCCCEEEEcCccccc
Confidence 5689999999886554
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.011 Score=54.62 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=43.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------C------------------------CHHhhccCCcEEE
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------K------------------------NPEEITRQADIII 286 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------~------------------------~l~~~l~~ADIVI 286 (371)
+++|+|.|+++-+|+.++..|+++|++|+++.|.. . .+.+.++.+|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 67899999988889999999999999999887753 0 1234567788888
Q ss_pred EccCCC
Q 017438 287 SAVGQP 292 (371)
Q Consensus 287 sAvG~p 292 (371)
..+|..
T Consensus 82 ~~a~~~ 87 (307)
T 2gas_A 82 CAAGRL 87 (307)
T ss_dssp ECSSSS
T ss_pred ECCccc
Confidence 887753
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.014 Score=52.23 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 36899999999999999999999999999999883
|
| >1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.0081 Score=62.59 Aligned_cols=94 Identities=15% Similarity=0.234 Sum_probs=76.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc----CC-------CeEEEEeCC--------C-------
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR----ED-------ATVSIVHSR--------T------- 272 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~----~g-------AtVtv~h~~--------t------- 272 (371)
-+|-.|++..|+-.+.+++..++++.|+|.+ |-.++.+|.. .| ..+++|+++ .
T Consensus 265 ~V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~ 343 (564)
T 1pj3_A 265 AVALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQE 343 (564)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTG
T ss_pred HHHHHHHHHHHHHhCCcHhHcEEEEeCCCHH-HHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHH
Confidence 3455789999999999999999999999987 9999999885 78 368999753 0
Q ss_pred -----------CCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 273 -----------KNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 273 -----------~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
.+|.+.++ ++|++|...+.|+.+++|||+ +.-+|+=+. ||.
T Consensus 344 ~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 403 (564)
T 1pj3_A 344 PFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS-NPT 403 (564)
T ss_dssp GGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred HHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 35778888 699999998889999999885 466777666 443
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.015 Score=49.00 Aligned_cols=55 Identities=13% Similarity=0.235 Sum_probs=42.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----C---------------------HHh-hccCCcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----N---------------------PEE-ITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----~---------------------l~~-~l~~ADIVIsAvG 290 (371)
..++++|+|.|. +|+.++..|.+.|..|+++.+... . +++ .+.+||.||.+++
T Consensus 2 ~~~~vlI~G~G~-vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 2 RKDHFIVCGHSI-LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CCSCEEEECCSH-HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCCcEEEECCCH-HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 357899999977 599999999999999999977520 0 222 2778899998888
Q ss_pred CC
Q 017438 291 QP 292 (371)
Q Consensus 291 ~p 292 (371)
..
T Consensus 81 ~d 82 (153)
T 1id1_A 81 ND 82 (153)
T ss_dssp CH
T ss_pred Ch
Confidence 54
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.0071 Score=61.55 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=53.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------CCHHhhcc---CCcEEEEccCCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------KNPEEITR---QADIIISAVGQPNM 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------~~l~~~l~---~ADIVIsAvG~p~~ 294 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .++++.+. ++|+||.+++.+..
T Consensus 3 kIgVIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred EEEEEChHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 6899999885 9999999999999999998752 13445444 59999999987532
Q ss_pred ----cc--CCCcCCCeEEEEee
Q 017438 295 ----VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 295 ----v~--~d~ik~gavVIDvg 310 (371)
+. ...+++|.+|||++
T Consensus 82 v~~vl~~l~~~l~~g~iIId~s 103 (478)
T 1pgj_A 82 TDSTIEQLKKVFEKGDILVDTG 103 (478)
T ss_dssp HHHHHHHHHHHCCTTCEEEECC
T ss_pred HHHHHHHHHhhCCCCCEEEECC
Confidence 21 12467899999987
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0049 Score=57.33 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
.|++++|+|||.|++ |.+++..|...|. ++++++..
T Consensus 28 ~l~~~~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCC
T ss_pred HHhCCeEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCC
Confidence 357899999999995 9999999999996 89998654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.014 Score=53.78 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----C---HH------------hhccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----N---PE------------EITRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----~---l~------------~~l~~ADIVIsAvG~p 292 (371)
+.+++|+|.|+++.+|+.++..|+++|++|+++.|... . +. .-+.+.|+||.+++..
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~ 80 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHK 80 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccC
Confidence 56899999999999999999999999999999977543 1 11 1122789999888754
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0093 Score=54.95 Aligned_cols=38 Identities=37% Similarity=0.437 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999998775
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.0085 Score=54.98 Aligned_cols=39 Identities=21% Similarity=0.317 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999999989999999999999999998765
|
| >3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.01 Score=61.39 Aligned_cols=73 Identities=23% Similarity=0.262 Sum_probs=56.1
Q ss_pred CCC-CEEEEEcCCcccHHHHHHHhccC------CCeEEEEeCCC-------------------CCHHhhccCCcEEEEcc
Q 017438 236 IKG-KRAVVIGRSNIVGMPAALLLQRE------DATVSIVHSRT-------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~G-K~vvVIG~s~~VGkpla~lL~~~------gAtVtv~h~~t-------------------~~l~~~l~~ADIVIsAv 289 (371)
|+| |+|.|||.|.+ |.++|..|.+. |.+|++..++. .++.+.+++||+||.++
T Consensus 51 L~GiKkIgIIGlGsM-G~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp TTTCSEEEEECCTTH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred hcCCCEEEEEeEhHH-HHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 789 99999999986 99999999998 88888875541 24567788999999999
Q ss_pred CCC---Cccc--CCCcCCCeEEEEe
Q 017438 290 GQP---NMVR--GSWIKPGAVIIDV 309 (371)
Q Consensus 290 G~p---~~v~--~d~ik~gavVIDv 309 (371)
+-. .++. ...+++|++|+..
T Consensus 130 P~~~~~eVl~eI~p~LK~GaILs~A 154 (525)
T 3fr7_A 130 SDAAQADNYEKIFSHMKPNSILGLS 154 (525)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEES
T ss_pred ChHHHHHHHHHHHHhcCCCCeEEEe
Confidence 832 2332 1346889886654
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.013 Score=55.73 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=61.3
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH----hhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE----EIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~----~~l 279 (371)
.-.+..|.+..---.|++|+|.|+++.+|..+++++...|++|+.+.++. .+.. +.+
T Consensus 131 ~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 131 MTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREIT 210 (333)
T ss_dssp HHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHh
Confidence 34455555332224699999999855579999999999999998886542 1221 122
Q ss_pred --cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 280 --RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
+..|+||.++|...+ ---+.++++..++.+|..
T Consensus 211 ~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 211 GGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp TTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCT
T ss_pred CCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecC
Confidence 258999999997322 122567888888999864
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.012 Score=55.42 Aligned_cols=38 Identities=24% Similarity=0.368 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-+++||.|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus 27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 35899999999999989999999999999999999775
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.017 Score=54.36 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=43.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------C------HHhhccC--CcEEEEcc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------N------PEEITRQ--ADIIISAV 289 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~------l~~~l~~--ADIVIsAv 289 (371)
.+++++|+|.|+++-+|+.++..|+++|++|+++.+... | +.+.++. .|+||..+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 467899999999999999999999999999999876521 1 2234455 89999887
Q ss_pred CC
Q 017438 290 GQ 291 (371)
Q Consensus 290 G~ 291 (371)
|.
T Consensus 98 ~~ 99 (333)
T 2q1w_A 98 AS 99 (333)
T ss_dssp CC
T ss_pred ee
Confidence 74
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.0094 Score=55.67 Aligned_cols=38 Identities=29% Similarity=0.334 Sum_probs=33.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999998888999999999999999999775
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.015 Score=56.96 Aligned_cols=57 Identities=18% Similarity=0.310 Sum_probs=43.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC-----------------------CCCHHhhccCCcEEEEccC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR-----------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~-----------------------t~~l~~~l~~ADIVIsAvG 290 (371)
+.+++|+|||++|.||.+++..|+.+| .+|.+++.. +.++++.+++||+||.++|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 357899999984457999998888887 378887543 2466778999999999999
Q ss_pred CC
Q 017438 291 QP 292 (371)
Q Consensus 291 ~p 292 (371)
.|
T Consensus 86 ~p 87 (343)
T 3fi9_A 86 AP 87 (343)
T ss_dssp --
T ss_pred CC
Confidence 65
|
| >4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A | Back alignment and structure |
|---|
Probab=95.44 E-value=0.096 Score=51.79 Aligned_cols=167 Identities=11% Similarity=0.115 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..---+=..++.++|.++.++.- .+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+...- ++
T Consensus 52 STRTR~SFE~A~~~LGg~vi~l~~-~~ssl~kgEsl~DTarvLs~y--~D~IviR~~~-----~-~~~~~lA~~~---~v 119 (355)
T 4a8p_A 52 STRTRVSFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER-----H-HSIVDLANCA---TI 119 (355)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECB-TTBCBTTTBCHHHHHHHHTTT--CSEEEEECSS-----H-HHHHHHHHHC---SS
T ss_pred ChhhHhhHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc-----H-HHHHHHHHhC---CC
Confidence 333333557789999999987642 221 234578888888774 8899888652 2 2223332211 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.| .+.+.||=+.+ ++.+.|+. |-+++|++|++||-++-|.+.++.+|...|++|+++.-.
T Consensus 120 PVINag-------~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~ 192 (355)
T 4a8p_A 120 PVINGM-------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNE 192 (355)
T ss_dssp CEEECC-------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCH
T ss_pred CEEeCC-------CCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCH
Confidence 445643 24567998888 45555555 437999999999998889999999999999999998533
Q ss_pred -------------------CCCHHhhccCCcEEEEcc----CC-------------CCc-ccCCCc---CCCeEEEEee
Q 017438 272 -------------------TKNPEEITRQADIIISAV----GQ-------------PNM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAv----G~-------------p~~-v~~d~i---k~gavVIDvg 310 (371)
+.+++ .+++||+|.+-+ |. |.+ |+.+.+ +++++|.=++
T Consensus 193 ~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 193 EHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 24566 789999999743 32 113 444443 6788888776
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.01 Score=54.18 Aligned_cols=38 Identities=26% Similarity=0.387 Sum_probs=31.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 42 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR 42 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence 35789999999998888999999999999999998775
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.013 Score=53.93 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.|+|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 5799999999999889999999999999999998654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.018 Score=58.38 Aligned_cols=55 Identities=18% Similarity=0.322 Sum_probs=46.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------CHHhhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~l~~~l~~ADIVIsAvG~p 292 (371)
+++|+|.|++|-+|+.++..|+++|.+|+++.|... .+.+.+.++|+||..+|..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~ 212 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEP 212 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCc
Confidence 789999999999999999999999999999987632 2346678899999888753
|
| >2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.11 Score=51.49 Aligned_cols=168 Identities=14% Similarity=0.135 Sum_probs=110.7
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++.-. +. .-|-+.+.++-|..- +++|.+--|- . ..++.+.- -. +
T Consensus 77 ~STRTR~SFE~A~~~LGg~vi~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~~-----~-~~~~~lA~--~s-~ 144 (359)
T 2w37_A 77 SSTRTRSAFTTASIDLGAHPEYLGQN-DIQLGKKESTSDTAKVLGSM--FDGIEFRGFK-----Q-SDAEILAR--DS-G 144 (359)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTT-TCCTTTSSCHHHHHHHHHHH--CSEEEEESSC-----H-HHHHHHHH--HS-S
T ss_pred CCccHHHHHHHHHHHcCCeEEEeCCc-cccCCCCcCHHHHHHHHHHh--cCEEEEecCC-----h-HHHHHHHH--hC-C
Confidence 45544446678999999999887532 21 123455555555543 5788887652 2 22333321 11 2
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.| .++|.+++++|-+ +-|++.++..|...|++|+++.-.
T Consensus 145 vPVINa~-------~~~~HPtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~ 216 (359)
T 2w37_A 145 VPVWNGL-------TDEWHPTQMLADFMTVKENFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTE 216 (359)
T ss_dssp SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCH
T ss_pred CCEEcCC-------CCCCCccHHHHHHHHHHHHhC-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 4556732 24567998888 555555555 8999999999996 557999999999999999998522
Q ss_pred -------------------CCCHHhhccCCcEEEEcc----CCC----------Cc-ccCCCc---C---CCeEEEEee
Q 017438 272 -------------------TKNPEEITRQADIIISAV----GQP----------NM-VRGSWI---K---PGAVIIDVG 310 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAv----G~p----------~~-v~~d~i---k---~gavVIDvg 310 (371)
+.++++.+++||+|.+-+ |.. .+ |+.+.+ + |+++|.=++
T Consensus 217 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 217 ETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp HHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 356778899999999633 432 12 455544 6 788888776
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.015 Score=52.81 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++ |.++.++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence 478999999999998999999999999996 88887653
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.011 Score=53.77 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45889999999999999999999999999999998775
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.013 Score=54.22 Aligned_cols=38 Identities=24% Similarity=0.226 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999999999999999998775
|
| >3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.12 Score=49.69 Aligned_cols=151 Identities=17% Similarity=0.250 Sum_probs=102.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
.|..---+=..++.++|.++.++.-... ..-|-+.+.++-|+.- .+|+|.+--|-...+.+. +.+.. + +
T Consensus 44 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-~~D~iviR~~~~~~~~~~-la~~~----~---v 114 (291)
T 3d6n_B 44 PSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGL-GFDYVVFRVPFVFFPYKE-IVKSL----N---L 114 (291)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHT-TCSEEEEEESSCCCSCHH-HHHTC----S---S
T ss_pred CCccHHHHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHh-cCCEEEEEcCChHHHHHH-HHHhC----C---C
Confidence 4544444667889999999988763211 1123466666666652 258899887754433221 32222 1 3
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcC--CcccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGR--SNIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~--s~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.|. .+...||-+.+ ++.+.|+.| +++|++++++|- ++-|.+.++..|...|++|+++.-.
T Consensus 115 PVINAG~------g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~ 187 (291)
T 3d6n_B 115 RLVNAGD------GTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD 187 (291)
T ss_dssp EEEEEEE------TTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT
T ss_pred CEEeCcc------CCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch
Confidence 3456331 34567998888 555555554 799999999998 6667999999999999999998532
Q ss_pred --------CCCHHhhccCCcEEEEccC
Q 017438 272 --------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 272 --------t~~l~~~l~~ADIVIsAvG 290 (371)
+.++++.+++||+|.+ +-
T Consensus 188 ~~~~g~~~~~d~~eav~~aDvvy~-~~ 213 (291)
T 3d6n_B 188 VEVFKVDVFDDVDKGIDWADVVIW-LR 213 (291)
T ss_dssp GGGGCEEEESSHHHHHHHCSEEEE-CC
T ss_pred HHHCCCEEEcCHHHHhCCCCEEEE-eC
Confidence 4578889999999998 54
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.016 Score=53.48 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899999999998888999999999999999998775
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=95.41 E-value=0.02 Score=55.29 Aligned_cols=53 Identities=19% Similarity=0.302 Sum_probs=42.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|||+|. +|.+++..|+..|. +|.++... |.++ +.+++||+||.++|.
T Consensus 5 ~kI~VIGaG~-vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 5 AKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF 82 (322)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 5899999966 69999999999886 88877643 1345 678999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 83 p~ 84 (322)
T 1t2d_A 83 TK 84 (322)
T ss_dssp SS
T ss_pred CC
Confidence 63
|
| >4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.1 Score=51.60 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=93.7
Q ss_pred HHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhh
Q 017438 130 NKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G 206 (371)
+=..+++++|.++.+..-. +. .-|-+.+.++-|..- +++|.+--| . ...++.+...-+| -..| |
T Consensus 87 SFE~A~~~LGg~vi~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~----~~~~~~la~~s~v---PVIN-G 153 (358)
T 4h31_A 87 AFEVAAFDQGAQVTYIGPS-GSQIGDKESMKDTARVLGRM--YDGIQYRGF--G----QAIVEELGAFAGV---PVWN-G 153 (358)
T ss_dssp HHHHHHHHTTCEEEEECSS-SSCBTTTBCHHHHHHHHHHH--CSEEEEECS--C----HHHHHHHHHHSSS---CEEE-S
T ss_pred HHHHHHHHcCCeEEECCcc-cccccCccchhHHHHHhhcc--CceeEeccc--c----hhHHHHhhhhccC---ceEC-C
Confidence 4567899999998766532 21 124466666666654 678888755 2 2233333222222 2233 2
Q ss_pred hhccCCCccccccCCHHH-HHHHHHHhC-CCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------------
Q 017438 207 RLAMRGREPLFIPCTPKG-CIELLHRYG-FDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------------ 271 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~g-vi~lL~~~~-i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------------ 271 (371)
. .+...||=+.+ ++.+.|+.+ ..++|++|++||-+ +-|.+.++.++...|++|++|.-.
T Consensus 154 -----~-g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~ 227 (358)
T 4h31_A 154 -----L-TDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAAC 227 (358)
T ss_dssp -----C-CSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHH
T ss_pred -----C-CcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHH
Confidence 1 34567997777 555555554 37999999999964 447999999999999999998532
Q ss_pred -------------CCCHHhhccCCcEEEEcc
Q 017438 272 -------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -------------t~~l~~~l~~ADIVIsAv 289 (371)
+.|+++.+++||+|.+-+
T Consensus 228 ~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~ 258 (358)
T 4h31_A 228 QAIAKQTGGKITLTENVAEGVQGCDFLYTDV 258 (358)
T ss_dssp HHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCcceeccCHHHHhccCcEEEEEE
Confidence 357889999999998644
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.013 Score=53.89 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 46899999999999889999999999999999998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.017 Score=52.66 Aligned_cols=37 Identities=30% Similarity=0.439 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999999988664
|
| >1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A | Back alignment and structure |
|---|
Probab=95.38 E-value=0.14 Score=49.83 Aligned_cols=169 Identities=14% Similarity=0.168 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..---+=..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|- .. .++.+. +-. .+
T Consensus 57 STRTR~SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~~-~~~~lA--~~~-~v 124 (321)
T 1oth_A 57 STRTRLSTETGFALLGGHPCFLTTQ-DIHLGVNESLTDTARVLSSM--ADAVLARVYK-----QS-DLDTLA--KEA-SI 124 (321)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEETT-TSCBTTTBCHHHHHHHHHHH--CSEEEEECSC-----HH-HHHHHH--HHC-SS
T ss_pred CcchHHHHHHHHHHcCCeEEEECCC-cCcCCCCCCHHHHHHHHHHh--CCEEEEeCCC-----hh-HHHHHH--HhC-CC
Confidence 4333335578899999999887632 22 123455555555543 5788887652 22 222332 111 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.| .+...||=+.+ ++.+.|+.| .++|++|++||-++-|.+.++..|...|++|+++.-.
T Consensus 125 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 196 (321)
T 1oth_A 125 PIINGL-------SDLYHPIQILADYLTLQEHYS-SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASV 196 (321)
T ss_dssp CEEESC-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHH
T ss_pred CEEcCC-------CCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHH
Confidence 456632 24567998888 555555554 7999999999998888999999999999999998532
Q ss_pred -----------------CCCHHhhccCCcEEEEcc----CCC-----------Cc-ccCCCc---CCCeEEEEeeec
Q 017438 272 -----------------TKNPEEITRQADIIISAV----GQP-----------NM-VRGSWI---KPGAVIIDVGIN 312 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv----G~p-----------~~-v~~d~i---k~gavVIDvgin 312 (371)
+.++++.+++||+|.+-+ |.. .+ |+.+.+ +|+++|.=.+-.
T Consensus 197 ~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP~ 273 (321)
T 1oth_A 197 TKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPR 273 (321)
T ss_dssp HHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCC
T ss_pred HHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCCC
Confidence 346778899999999844 421 12 444433 778888887743
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.021 Score=53.04 Aligned_cols=38 Identities=29% Similarity=0.324 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence 57899999999999889999999999999999998754
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.012 Score=53.83 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=0.017 Score=54.67 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=46.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------------------CHHhhccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------------NPEEITRQA 282 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------------------~l~~~l~~A 282 (371)
++++++|+|.|+++-+|+.++..|+++|++|+++.+... .+.+.++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 467899999999998999999999999999999876421 133456788
Q ss_pred cEEEEccCCC
Q 017438 283 DIIISAVGQP 292 (371)
Q Consensus 283 DIVIsAvG~p 292 (371)
|+||..+|..
T Consensus 104 d~vih~A~~~ 113 (352)
T 1sb8_A 104 DYVLHQAALG 113 (352)
T ss_dssp SEEEECCSCC
T ss_pred CEEEECCccc
Confidence 9999888753
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.013 Score=54.37 Aligned_cols=56 Identities=14% Similarity=0.265 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------CCHHhhcc--CCcEEEEccCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------KNPEEITR--QADIIISAVGQP 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------~~l~~~l~--~ADIVIsAvG~p 292 (371)
.+++|+|.|+++.+|+.++..|+++|++|+++.++. ..+.+.++ ..|+||..+|..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 468999999999999999999999999998876542 12445666 899999888754
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.025 Score=50.99 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE 41 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 5789999999999999999999999999999988764
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.019 Score=53.37 Aligned_cols=39 Identities=31% Similarity=0.361 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999998888999999999999999988543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.032 Score=53.75 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=46.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~ 291 (371)
+.++++|+|.|+++-+|+.++..|+++|++|+++.|... .+.+.++..|+||..+|.
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 446799999999999999999999999999999876531 134567789999988874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.02 Score=53.66 Aligned_cols=38 Identities=21% Similarity=0.400 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999889999999999999999998765
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.015 Score=53.86 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 4689999999999988999999999999999999876
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0083 Score=57.82 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=63.3
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhc
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEIT 279 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l 279 (371)
||....++..|.+..---.|++|+|+|+++.+|..+++++...|++|+++.++. .++.+.+
T Consensus 149 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 149 PETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVI 228 (353)
T ss_dssp HHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHH
Confidence 333344445553332223699999997666679999999999999998876542 2333332
Q ss_pred -----cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 280 -----RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 -----~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
+..|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus 229 ~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 229 KAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp HHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCT
T ss_pred HHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEec
Confidence 258999999997533 123567888888888854
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.011 Score=53.54 Aligned_cols=36 Identities=31% Similarity=0.426 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 478999999999999999999999999999999887
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.26 E-value=0.023 Score=52.03 Aligned_cols=56 Identities=9% Similarity=0.214 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC------HHhhcc--CCcEEEEccCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------PEEITR--QADIIISAVGQP 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~------l~~~l~--~ADIVIsAvG~p 292 (371)
.-++|+|.|+++-+|+.++..|+++|++|+++.|..-| +.+.++ ..|+||..+|..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 74 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT 74 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence 46899999999999999999999999999999876433 344566 799999888854
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=95.26 E-value=0.016 Score=53.82 Aligned_cols=54 Identities=17% Similarity=0.277 Sum_probs=40.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhcc--CCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITR--QADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~--~ADIVIsAvG~ 291 (371)
||+|+|.|+++-+|+.++..|+++|++|+++.+.. ..+.+.++ +.|+||..+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 68999999999899999999999999999887432 12334454 48999988874
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.26 E-value=0.025 Score=51.29 Aligned_cols=39 Identities=8% Similarity=-0.012 Sum_probs=33.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t 272 (371)
.++++|+++|.|+++-+|+.++..|+++| ++|+++.++.
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 35789999999999999999999999999 8999987764
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.019 Score=54.79 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=65.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 278 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~ 278 (371)
+||.....+..|+..++ -.|++|+|+|+|+ +|..+++++...|++|+.+.++. .++.+.
T Consensus 148 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~ 225 (340)
T 3s2e_A 148 ILCAGVTVYKGLKVTDT-RPGQWVVISGIGG-LGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW 225 (340)
T ss_dssp GGTHHHHHHHHHHTTTC-CTTSEEEEECCST-THHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHH
T ss_pred ccchhHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHH
Confidence 45655556666755433 4699999999976 69999999999999998875431 233333
Q ss_pred cc----CCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 279 TR----QADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l~----~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
++ .+|+||.++|.+..+. -+.++++-.++.+|..
T Consensus 226 ~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 226 LQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp HHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred HHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCC
Confidence 22 5789998888665432 2457888888888864
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.019 Score=53.48 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999889999999999999999998765
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.018 Score=55.86 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC------------------CCCHHhhc-----cCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------------------TKNPEEIT-----RQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------------------t~~l~~~l-----~~ADIVIsAvG~p 292 (371)
-.|++|+|+|+++.+|..+++++...|++|+...+. ..++.+.+ ..+|++|-++|.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~ 242 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence 579999999997778999999999999987655321 23333322 2389999999986
Q ss_pred Cccc--CCCc-CCCeEEEEeeec
Q 017438 293 NMVR--GSWI-KPGAVIIDVGIN 312 (371)
Q Consensus 293 ~~v~--~d~i-k~gavVIDvgin 312 (371)
..+. -+.+ ++|-.++.+|..
T Consensus 243 ~~~~~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 243 ESTTFCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCC
T ss_pred HHHHHHHHHhhcCCCEEEEEecC
Confidence 5432 2456 578888888854
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.018 Score=48.82 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=31.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.....+++++|+|.|. +|..++..|...|+.|+++.++
T Consensus 14 ~~~~~~~~v~IiG~G~-iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGR-LGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ---CCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESC
T ss_pred hcccCCCcEEEECCCH-HHHHHHHHHHhCCCeEEEEECC
Confidence 3567899999999977 5999999999999999999764
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.021 Score=54.56 Aligned_cols=54 Identities=17% Similarity=0.335 Sum_probs=43.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------------CCHHhhccCCcEEEEccC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG 290 (371)
.++|.|||+|. +|.+++..|+..|. +|+++.+.. .++ +.+++||+||.++|
T Consensus 4 ~~kI~VIGaG~-~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQ-IGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 46899999976 59999999999887 899886542 233 45789999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 82 ~p~ 84 (317)
T 2ewd_A 82 IPG 84 (317)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.013 Score=55.53 Aligned_cols=56 Identities=21% Similarity=0.314 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhcc--CCcEEE
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITR--QADIII 286 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~--~ADIVI 286 (371)
..++|+|.|++|-+|+.++..|+++|.+|+++.|.. ..+.+.++ .+|+||
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 467999999988899999999999999999998754 11345567 899999
Q ss_pred EccCCC
Q 017438 287 SAVGQP 292 (371)
Q Consensus 287 sAvG~p 292 (371)
.++|..
T Consensus 89 ~~a~~~ 94 (346)
T 3i6i_A 89 STVGGE 94 (346)
T ss_dssp ECCCGG
T ss_pred ECCchh
Confidence 888754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.017 Score=53.19 Aligned_cols=37 Identities=27% Similarity=0.091 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+.+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999998899999999999999999988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.018 Score=53.58 Aligned_cols=55 Identities=18% Similarity=0.185 Sum_probs=43.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-C-----------------------------CHHhhccCCcEEEE
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K-----------------------------NPEEITRQADIIIS 287 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~-----------------------------~l~~~l~~ADIVIs 287 (371)
.++|+|.|+++-+|+.++..|+++|++|+++.|+. . .+.+.++.+|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 57899999988889999999999999999987753 0 13355677888888
Q ss_pred ccCCC
Q 017438 288 AVGQP 292 (371)
Q Consensus 288 AvG~p 292 (371)
.+|..
T Consensus 84 ~a~~~ 88 (321)
T 3c1o_A 84 ALPFP 88 (321)
T ss_dssp CCCGG
T ss_pred CCCcc
Confidence 87743
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.0098 Score=55.28 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999889999999999999999988664
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.019 Score=52.93 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999889999999999999999999876
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.058 Score=51.29 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=52.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.+|+|||+|.+ |..++..|.+.|.+|+++.|.. .+.++..+.+|+||.++..
T Consensus 3 mkI~IiGaGai-G~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAI-GSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHH-HHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 58999999885 9999999999999999987642 1223333489999999986
Q ss_pred CCc---cc--CCCcCCCeEEEEee
Q 017438 292 PNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 292 p~~---v~--~d~ik~gavVIDvg 310 (371)
..+ +. ...++++++||.+-
T Consensus 82 ~~~~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 82 VEGADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp CTTCCHHHHHTTSCCTTCEEEEEC
T ss_pred CChHHHHHHHHhhcCCCCEEEEeC
Confidence 443 11 24567788888763
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.037 Score=49.41 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999888999999999999999998776
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.013 Score=49.08 Aligned_cols=53 Identities=15% Similarity=0.208 Sum_probs=41.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------C---HHh-hccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------N---PEE-ITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~---l~~-~l~~ADIVIsAvG~p 292 (371)
++++|+|.|.+ |+.++..|.+.|..|+++.++.. + +++ .+.+||+||.+++..
T Consensus 8 ~~viIiG~G~~-G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 8 NHALLVGYGRV-GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp SCEEEECCSHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCEEEECcCHH-HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 57999999885 99999999999999999986521 1 122 257899999999864
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.018 Score=53.62 Aligned_cols=37 Identities=30% Similarity=0.313 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+|+|.|+++-+|+.++..|+++|++|+++.+..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 3689999999988899999999999999999987653
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.013 Score=54.26 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=32.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.++.||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 345789999999999889999999999999999999875
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.027 Score=54.78 Aligned_cols=55 Identities=20% Similarity=0.323 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------------CCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsA 288 (371)
.+.++|.|||+|. +|.+++..|+..|. +|+++.... .+. +.+++||+||.+
T Consensus 5 m~~~kI~viGaG~-vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIia 82 (324)
T 3gvi_A 5 MARNKIALIGSGM-IGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVT 82 (324)
T ss_dssp -CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEEC
T ss_pred CcCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEc
Confidence 3567999999966 59999999998887 888876431 233 678999999999
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|.|
T Consensus 83 ag~p 86 (324)
T 3gvi_A 83 AGVP 86 (324)
T ss_dssp CSCC
T ss_pred cCcC
Confidence 9965
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.19 E-value=0.017 Score=53.35 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence 3689999999999988899999999999999999876
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.014 Score=52.92 Aligned_cols=36 Identities=33% Similarity=0.408 Sum_probs=33.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 368999999999998999999999999999999877
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.017 Score=51.33 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------CHHhhcc------CCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------NPEEITR------QADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~l~~~l~------~ADIVIsAvG~ 291 (371)
.||+++|.|+++-+|+.++..|+++|++|+++.++.. ++++.+. ..|+||..+|.
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~ 76 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 76 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence 3789999999999999999999999999999877532 1223333 67999988774
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.016 Score=56.09 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhc-
Q 017438 220 CTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEIT- 279 (371)
Q Consensus 220 cTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l- 279 (371)
+.....+..|.+..---.|++|+|+|+++.+|..+++++...|++|+.+.++. .++.+.+
T Consensus 146 ~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLK 225 (362)
T ss_dssp THHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHH
Confidence 33344445554443224699999999756679999999999999988876541 2232222
Q ss_pred ----cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 280 ----RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ----~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
..+|+||.++|.+.+ ---+.++++..++.+|..
T Consensus 226 ~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 226 QEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp HHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCG
T ss_pred HhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCC
Confidence 247999988886322 112456777788888864
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.012 Score=54.72 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++.||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998888999999999999999998775
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.038 Score=51.36 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999998889999999999999999987653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.038 Score=53.58 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECCh
Confidence 468999999999998899999999999999999997764
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.015 Score=51.95 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999999999999999999999999998875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.012 Score=55.14 Aligned_cols=37 Identities=41% Similarity=0.565 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999998888999999999999999998765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.021 Score=52.96 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 77 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT 77 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC
Confidence 45789999999999999999999999999999998764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.08 E-value=0.033 Score=50.89 Aligned_cols=53 Identities=15% Similarity=0.278 Sum_probs=44.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC------HHhhcc--CCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------PEEITR--QADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~------l~~~l~--~ADIVIsAvG~p 292 (371)
+|+|.|+++-+|+.++..|+++|++|+++.|..-| +.+.++ ..|+||..+|..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~ 67 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYT 67 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence 89999999989999999999999999999876543 334555 599999888754
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.022 Score=52.67 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~ 61 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS 61 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999998888999999999999999988763
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.021 Score=52.05 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-||+|+|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 489999999999899999999999999999998764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.031 Score=50.99 Aligned_cols=53 Identities=8% Similarity=0.023 Sum_probs=42.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhh----------------ccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI----------------TRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~----------------l~~ADIVIsAvG~ 291 (371)
.++|+|.|+ |.+|+.++..|+++|.+|+.+.|+..+.... +.++|+||..++.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCc
Confidence 378999998 6679999999999999999998865332211 5678999987774
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.029 Score=52.26 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++.||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999888899999999999999999877
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.017 Score=52.27 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 589999999998899999999999999999998763
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.02 Score=54.95 Aligned_cols=94 Identities=23% Similarity=0.177 Sum_probs=65.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHH-
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPE- 276 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~- 276 (371)
+|+...-.+..++..++ -.|.+|+|+|+|. +|..+++++...|+ +|+.+.+.. .++.
T Consensus 148 ~~~~~~ta~~al~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 225 (352)
T 3fpc_A 148 IPDMMTTGFHGAELANI-KLGDTVCVIGIGP-VGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVE 225 (352)
T ss_dssp TTTHHHHHHHHHHHTTC-CTTCCEEEECCSH-HHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHH
T ss_pred ccchhHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHH
Confidence 34433344455555443 3699999999865 69999999999999 788876542 2222
Q ss_pred ---hhcc--CCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 277 ---EITR--QADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 277 ---~~l~--~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
+.+. .+|+||.++|.+..+. -+++++|-.++.+|...
T Consensus 226 ~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 269 (352)
T 3fpc_A 226 QILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG 269 (352)
T ss_dssp HHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred HHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccC
Confidence 2222 4899999999876543 35688888899998653
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.022 Score=55.54 Aligned_cols=57 Identities=19% Similarity=0.358 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-----------------------CCHHhhccCCcEEEEcc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-----------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-----------------------~~l~~~l~~ADIVIsAv 289 (371)
+-.+++|+|||+|. ||.+++..|+..+. ++.+++... .+..+.+++||+||.++
T Consensus 6 ~~~~~kV~ViGaG~-vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a 84 (326)
T 3vku_A 6 DKDHQKVILVGDGA-VGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA 84 (326)
T ss_dssp -CCCCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred cCCCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence 45678999999977 59999999988875 788886431 12246789999999999
Q ss_pred CCC
Q 017438 290 GQP 292 (371)
Q Consensus 290 G~p 292 (371)
|.|
T Consensus 85 g~~ 87 (326)
T 3vku_A 85 GAP 87 (326)
T ss_dssp CCC
T ss_pred CCC
Confidence 865
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.019 Score=53.64 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999889999999999999999999875
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.028 Score=53.31 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=41.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCCC--------------------HHhhcc-----CCcEEEEc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTKN--------------------PEEITR-----QADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~~--------------------l~~~l~-----~ADIVIsA 288 (371)
++++++|+|.|+++-+|+.++..|+++| ++|+++.+.... +++.++ +.|+||..
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 3678999999999999999999999999 899998765321 123344 48999988
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|..
T Consensus 123 A~~~ 126 (357)
T 2x6t_A 123 GACS 126 (357)
T ss_dssp CSCC
T ss_pred Cccc
Confidence 8743
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.02 Score=57.87 Aligned_cols=68 Identities=24% Similarity=0.324 Sum_probs=51.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------------------------CHHhhccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------------------NPEEITRQA 282 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------------------~l~~~l~~A 282 (371)
++|.|||.|.+ |.++|..|++.|.+|++++++.. ++ +.+++|
T Consensus 38 ~kV~VIGaG~M-G~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 38 SSVGVLGLGTM-GRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 68999999875 99999999999999999976421 22 346789
Q ss_pred cEEEEccCCCCcccC-------CCcCCCeEEEE
Q 017438 283 DIIISAVGQPNMVRG-------SWIKPGAVIID 308 (371)
Q Consensus 283 DIVIsAvG~p~~v~~-------d~ik~gavVID 308 (371)
|+||.+++...-++. ..+++++++++
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 999999975311111 24678999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.03 Score=52.09 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4678999999999888899999999999999999875
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.038 Score=49.20 Aligned_cols=54 Identities=17% Similarity=0.196 Sum_probs=43.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------HHhhcc----CCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------PEEITR----QADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------l~~~l~----~ADIVIsAvG~p 292 (371)
|+|+|.|+++-+|+.++..|+++|++|+++.++... +++.++ ..|+||..+|..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 679999998889999999999999999999876421 223333 789999888853
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.023 Score=51.32 Aligned_cols=37 Identities=30% Similarity=0.318 Sum_probs=29.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||.++|.|+++-+|+.++..|++ |+.|.++.++.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~ 38 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP 38 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 46899999999999899999999987 89999988763
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.028 Score=54.31 Aligned_cols=96 Identities=24% Similarity=0.269 Sum_probs=65.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHh
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEE 277 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~ 277 (371)
.+||.....+..|.+..---.|++|+|+|.|. +|..+++++...|++|+++.+.. .++.+
T Consensus 169 ~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 247 (363)
T 3uog_A 169 TLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVE 247 (363)
T ss_dssp TTTTHHHHHHHHHTTTTCCCTTCEEEEESSBH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred hcccHHHHHHHHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHH
Confidence 35666666666664333334699999999655 69999999999999988876541 23322
Q ss_pred h----c--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecC
Q 017438 278 I----T--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 278 ~----l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~ 313 (371)
. + +.+|+||.++|.+.+ ---+.++++-.++.+|...
T Consensus 248 ~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 248 RVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp HHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCS
T ss_pred HHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCC
Confidence 2 2 268999999994322 1234678888899998653
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.032 Score=51.64 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=30.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
||+|+|.|+++-+|+.++..|+++|++|+++.|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r 33 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR 33 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence 689999999999999999999999999998765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.03 Score=52.13 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=43.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------CHHhhccCCcEEEEccCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------------~l~~~l~~ADIVIsAvG~p 292 (371)
.|+|+|+|+++-+|+.++..|+++|++|+++.|+.. .+.+.++.+|+||..+|..
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~ 90 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP 90 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence 368999999888899999999999999999877642 1234567788888877743
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.011 Score=57.18 Aligned_cols=93 Identities=20% Similarity=0.166 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHh--
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEE-- 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~-- 277 (371)
||...-.+..|.+..---.|++|+|.|+++.+|..+++++...|++|+.+.++. .++.+
T Consensus 152 ~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~ 231 (351)
T 1yb5_A 152 GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKI 231 (351)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHH
T ss_pred hhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHH
Confidence 443344555554332223699999999966679999999999999988876531 12222
Q ss_pred --hc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 278 --IT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 278 --~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
.+ +..|+||.++|.+.+- .-+.++++-.++.+|.
T Consensus 232 ~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp HHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCC
T ss_pred HHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEec
Confidence 22 2589999998865321 1245678778888884
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.018 Score=52.66 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999998899999999999999999998764
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.028 Score=55.12 Aligned_cols=35 Identities=17% Similarity=0.454 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
|++++|+|||.|++ |.+++..|...|. ++++++..
T Consensus 116 L~~~~VlvvG~Ggl-Gs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 116 LKNAKVVILGCGGI-GNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEEECC
T ss_pred HhCCeEEEECCCHH-HHHHHHHHHhCCCCeEEEECCC
Confidence 57899999999995 9999999999995 89988643
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.0097 Score=60.85 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=51.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------------------------CHHhhc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------------------NPEEIT 279 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------------------------~l~~~l 279 (371)
-++|.|||.|.+ |.++|..|++.|.+|++++++.. ++ +.+
T Consensus 5 ~~kVgVIGaG~M-G~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 82 (483)
T 3mog_A 5 VQTVAVIGSGTM-GAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HAL 82 (483)
T ss_dssp CCCEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGG
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHh
Confidence 368999999885 99999999999999999976531 12 347
Q ss_pred cCCcEEEEccCCCCcccC-------CCcCCCeEEEE
Q 017438 280 RQADIIISAVGQPNMVRG-------SWIKPGAVIID 308 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~~-------d~ik~gavVID 308 (371)
++||+||.+++...-++. +.+++++++++
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 889999999975311221 24578888865
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=94.88 E-value=0.024 Score=52.20 Aligned_cols=38 Identities=29% Similarity=0.325 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 36899999999999889999999999999999987543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.88 E-value=0.023 Score=52.39 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=43.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------------------CHHhhccCCcEEEE
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------------NPEEITRQADIIIS 287 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------------~l~~~l~~ADIVIs 287 (371)
.++|+|+|+++-+|+.++..|+++|.+|+++.|... .+.+.++.+|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 578999999888899999999999999998876521 13345667888888
Q ss_pred ccCCC
Q 017438 288 AVGQP 292 (371)
Q Consensus 288 AvG~p 292 (371)
++|..
T Consensus 84 ~a~~~ 88 (308)
T 1qyc_A 84 TVGSL 88 (308)
T ss_dssp CCCGG
T ss_pred CCcch
Confidence 77743
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.021 Score=53.03 Aligned_cols=39 Identities=28% Similarity=0.261 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 346899999999999889999999999999999998775
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.029 Score=52.57 Aligned_cols=60 Identities=15% Similarity=0.326 Sum_probs=46.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCCCC---------------C------HHhhc-cCCc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSRTK---------------N------PEEIT-RQAD 283 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~t~---------------~------l~~~l-~~AD 283 (371)
++.++|++|+|.|+++-+|+.++..|+++| ++|+++.+... | +.+.+ ...|
T Consensus 9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d 88 (342)
T 2hrz_A 9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPD 88 (342)
T ss_dssp CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCS
T ss_pred CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCC
Confidence 345789999999998889999999999999 78988876431 1 23445 4789
Q ss_pred EEEEccCCC
Q 017438 284 IIISAVGQP 292 (371)
Q Consensus 284 IVIsAvG~p 292 (371)
+||..+|..
T Consensus 89 ~vih~A~~~ 97 (342)
T 2hrz_A 89 VIFHLAAIV 97 (342)
T ss_dssp EEEECCCCC
T ss_pred EEEECCccC
Confidence 999888743
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.015 Score=53.19 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998775
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.017 Score=53.51 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEcCCcc--cHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNI--VGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~--VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-.++||.++|.|+++. +|+.++..|+++|++|.++.+..
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 3588999999997643 79999999999999999987764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.042 Score=50.66 Aligned_cols=53 Identities=19% Similarity=0.214 Sum_probs=41.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------------HHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------------PEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------------l~~~l~~ADIVIsAvG~p 292 (371)
++|+|.|+++-+|+.++..|+++|++|+++.+.... +.+.++. |+||..+|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCC
Confidence 579999999989999999999999999998764321 2233444 8999887754
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=94.83 E-value=0.048 Score=49.16 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=43.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------HHhhcc----CCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------PEEITR----QADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------l~~~l~----~ADIVIsAvG~p 292 (371)
|+++|.|+++-+|+.++..|+++|++|+++.++... +++.++ .-|+||+.+|..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 679999999989999999999999999999876421 223343 449999988854
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.025 Score=54.19 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccC-CC-eEEEEeCCC----------------------C---CHHhhccCCcEEEE
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQRE-DA-TVSIVHSRT----------------------K---NPEEITRQADIIIS 287 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~-gA-tVtv~h~~t----------------------~---~l~~~l~~ADIVIs 287 (371)
.++||+|+|.|+++-+|+.++..|+++ |+ +|+++.|.. . .+.+.++..|+||.
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 468999999999998999999999999 97 999887642 1 23356778899998
Q ss_pred ccCCC
Q 017438 288 AVGQP 292 (371)
Q Consensus 288 AvG~p 292 (371)
++|..
T Consensus 98 ~Aa~~ 102 (344)
T 2gn4_A 98 AAALK 102 (344)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88754
|
| >4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.21 Score=49.54 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEe-----CCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017438 124 SATYVRNKKKACQSVGINSFEVH-----LPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~-----lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 198 (371)
|..---+=..++.++|.++.++. +.. -|-+.+.++-|..- +++|.+--|- . ..++.+...-+
T Consensus 82 STRTR~SFE~A~~~LGg~vi~l~~~~ss~~k---gEsl~DTarvLs~~--~D~IviR~~~-----~-~~~~~lA~~s~-- 148 (365)
T 4amu_A 82 STRTRCAFEVAASDLGAGVTYIGPSGSNMGK---KESIEDTAKVLGRF--YDGIEFRGFA-----Q-SDVDALVKYSG-- 148 (365)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECHHHHCCSS---SSCHHHHHHHHHHH--CSEEEEECSC-----H-HHHHHHHHHHC--
T ss_pred CchHHHHHHHHHHhCCCEEEEcCCccccCCC---CcCHHHHHHHHHhh--CcEEEEecCC-----h-hHHHHHHHhCC--
Confidence 44444455778999999998763 222 23355555555543 6788887552 2 22233322112
Q ss_pred ccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-----
Q 017438 199 GFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR----- 271 (371)
Q Consensus 199 gl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~----- 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.| .++|++|++||-+ +-|++.++.++...|++|+++.-.
T Consensus 149 -vPVINa~-------~~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~ 219 (365)
T 4amu_A 149 -VPVWNGL-------TDDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNE 219 (365)
T ss_dssp -SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGG
T ss_pred -CCEEeCC-------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCC
Confidence 3445642 24567998888 556666665 5999999999987 557999999999999999998421
Q ss_pred ----------------------CCCHHhhccCCcEEEEc----cCCC------------Cc-ccCCCc---CCCeEEEEe
Q 017438 272 ----------------------TKNPEEITRQADIIISA----VGQP------------NM-VRGSWI---KPGAVIIDV 309 (371)
Q Consensus 272 ----------------------t~~l~~~l~~ADIVIsA----vG~p------------~~-v~~d~i---k~gavVIDv 309 (371)
+.++++.+++||+|.+- .|.+ .+ |+.+.+ +|+++|.=+
T Consensus 220 ~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHc 299 (365)
T 4amu_A 220 IDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHC 299 (365)
T ss_dssp SCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEEC
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECC
Confidence 24667889999999974 2432 12 555544 678888877
Q ss_pred e
Q 017438 310 G 310 (371)
Q Consensus 310 g 310 (371)
.
T Consensus 300 L 300 (365)
T 4amu_A 300 L 300 (365)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.82 E-value=0.015 Score=55.03 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=60.4
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHh----hc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEE----IT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~----~l 279 (371)
.-.+..|.+..---.|++|+|.|+++.+|..+++++...|++|+++.++. .+..+ .+
T Consensus 126 ~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEIT 205 (327)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHh
Confidence 33445554332223699999999766679999999999999998886541 12212 22
Q ss_pred --cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 280 --RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
...|+||.++| +..+. -+.++++..++.+|..
T Consensus 206 ~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 206 GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCT
T ss_pred CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecC
Confidence 24799999999 44332 2567888888888854
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=94.81 E-value=0.046 Score=49.18 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP 36 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999999999999999999999999999987753
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.029 Score=51.89 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++..
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence 4689999999999999999999999999999999987653
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.80 E-value=0.018 Score=51.45 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999889999999999999999998775
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.036 Score=53.06 Aligned_cols=53 Identities=25% Similarity=0.391 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|||+|. ||.+++..|+..|. +|.+++... .++ +.+++||+||.++|.
T Consensus 3 ~kI~VIGaG~-vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 3 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 5899999966 69999999998885 877775431 344 668999999999987
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 81 p~ 82 (309)
T 1ur5_A 81 PR 82 (309)
T ss_dssp --
T ss_pred CC
Confidence 63
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.024 Score=52.73 Aligned_cols=39 Identities=33% Similarity=0.552 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999998899999999999999999998763
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.021 Score=53.06 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 579999999999889999999999999999998775
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.018 Score=53.65 Aligned_cols=38 Identities=24% Similarity=0.244 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 46899999999999889999999999999999998775
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.012 Score=56.37 Aligned_cols=92 Identities=18% Similarity=0.082 Sum_probs=60.6
Q ss_pred cCCHHHHHHHHHHhCCCCCC-CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh
Q 017438 219 PCTPKGCIELLHRYGFDIKG-KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~G-K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~ 278 (371)
||.+..++.+++..+ ..| +.++|.|+++.+|..+++++...||+|+.+.++. .++.+.
T Consensus 147 ~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~ 224 (349)
T 3pi7_A 147 IVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEAT 224 (349)
T ss_dssp SHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHH
T ss_pred cccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHH
Confidence 333333444555444 345 7777776666679999999999999988876542 222222
Q ss_pred c------cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 279 T------RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l------~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
+ +..|+||.++|.+.+- --+.++++-.++.+|..
T Consensus 225 v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 225 LREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp HHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCS
T ss_pred HHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEecc
Confidence 2 3689999999975431 12457888889999854
|
| >3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.089 Score=50.42 Aligned_cols=119 Identities=16% Similarity=0.063 Sum_probs=69.9
Q ss_pred CCEEEEEcCCcccHHH-HHHHhccCCCeEEEEeCCCC-CHHhhccCCcEEEEccCCCCcccCCCcC---CCeEEEEeeec
Q 017438 238 GKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTK-NPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVGIN 312 (371)
Q Consensus 238 GK~vvVIG~s~~VGkp-la~lL~~~gAtVtv~h~~t~-~l~~~l~~ADIVIsAvG~p~~v~~d~ik---~gavVIDvgin 312 (371)
.|++.|||.|++ |.. +|.+|.++|++|++++.+.. ...+.+++..|-|. .|. .++++. ...+|+--|++
T Consensus 4 ~~~i~~iGiGg~-Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~-~g~----~~~~l~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 4 MKHIHIIGIGGT-FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVY-EGF----DAAQLDEFKADVYVIGNVAK 77 (326)
T ss_dssp CCEEEEESCCSH-HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEE-ESC----CGGGGGSCCCSEEEECTTCC
T ss_pred CcEEEEEEECHH-HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEE-CCC----CHHHcCCCCCCEEEECCCcC
Confidence 589999999997 995 99999999999999998643 23333333232222 121 112221 23444444444
Q ss_pred CCCCCC----CCCCceeecccchhh--hhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 313 PVEDAK----SPRGYRLVGDVCYEE--ACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 313 ~~~~~~----~~~g~kl~GDVd~~~--v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
+.. |. ...|-++++++++-. ..+ ...+--|-|--|.-|+..|+.++++.+
T Consensus 78 ~~~-p~~~~a~~~gi~v~~~~e~~~~~~~~-~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 78 RGM-DVVEAILNLGLPYISGPQWLSENVLH-HHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp TTC-HHHHHHHHTTCCEEEHHHHHHHHTGG-GSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCC-HHHHHHHHcCCcEEeHHHHHHHHHhc-CCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 321 00 002335778776421 111 112223668999999999999998765
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.019 Score=55.37 Aligned_cols=70 Identities=20% Similarity=0.316 Sum_probs=53.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.+.++|+||.++..
T Consensus 17 kI~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 17 KAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT 95 (366)
T ss_dssp EEEEECCSHH-HHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH
T ss_pred eEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh
Confidence 7999999885 9999999999999999997642 2344567889999999974
Q ss_pred CC---cccC------CCcCC-CeEEEEee
Q 017438 292 PN---MVRG------SWIKP-GAVIIDVG 310 (371)
Q Consensus 292 p~---~v~~------d~ik~-gavVIDvg 310 (371)
.. .+.. ..+++ +++|||+.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~ 124 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCT 124 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEEC
Confidence 22 1221 23567 89999985
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.019 Score=55.88 Aligned_cols=87 Identities=21% Similarity=0.397 Sum_probs=61.7
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHHhhcc----
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEEITR---- 280 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~~~l~---- 280 (371)
.+..++..++ -.|++|+|+|+|. ||..+++++...|+ +|+++.+. ..++.+.++
T Consensus 171 a~~~l~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 171 CLHGVDLSGI-KAGSTVAILGGGV-IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTS
T ss_pred HHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhh
Confidence 3444555544 3699999999965 69999999999999 78777443 234444443
Q ss_pred ----CCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 281 ----QADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 281 ----~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
.+|+||.++|.+..+. -+.+++|-.++.+|...
T Consensus 249 ~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp SSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred ccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence 3899999999765432 24678888888898654
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.03 Score=53.68 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=52.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
+|+|||+|. +|.+++..|+..|. +|+++.+. +.+ ++.+++||+||.++|.
T Consensus 2 kI~ViGaG~-vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred EEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 689999966 59999999988875 78887543 134 6788999999999996
Q ss_pred CC---c-----c--cC----------CCcCCCeEEEEeeecCC
Q 017438 292 PN---M-----V--RG----------SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 292 p~---~-----v--~~----------d~ik~gavVIDvgin~~ 314 (371)
|. . + +. .-..|.++++-++ ||+
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs-NPv 121 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT-NPM 121 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS-SSH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC-Ccc
Confidence 53 1 1 00 1125788888887 775
|
| >2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.027 Score=56.23 Aligned_cols=110 Identities=25% Similarity=0.375 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH-----------------HhhccCCcEEEEccCCCCcccC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP-----------------EEITRQADIIISAVGQPNMVRG 297 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l-----------------~~~l~~ADIVIsAvG~p~~v~~ 297 (371)
+++||+|.|||.|++ |...+.+|.++|++|+.++++.... .+.+..+|.||.+.|.|.-. +
T Consensus 2 ~~~~~~v~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~-p 79 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAH-P 79 (439)
T ss_dssp CCTTCCEEEECCHHH-HHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSCTTC-H
T ss_pred CCCCCEEEEEeecHH-HHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCCCCC-H
Confidence 468999999999997 9999999999999999998764221 12223455555555533210 0
Q ss_pred CCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhc-ceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 298 SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVA-SAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 298 d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a-~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++.. . .+ .+.+++++.++-. ... ..+--|-|--|.=|+..++.++++.+
T Consensus 80 ~~~~--------a---~~-----~~~~v~~~~~~~~--~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 80 SLSA--------A---AD-----AGIEIVGDIELFC--REAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp HHHH--------H---HH-----TTCEEECHHHHHH--HHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHHH--------H---HH-----CCCcEEEHHHHHH--HhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 0000 0 00 1225666554211 110 11222568888999999999998764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.054 Score=50.04 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=43.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------HHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------PEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------l~~~l~~ADIVIsAvG~ 291 (371)
||+|.|++|.+|+.++..|+++|.+|++..|+... ..+.+..+|.||..+|.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~ 61 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGE 61 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccC
Confidence 69999999999999999999999999999886421 23457899999987764
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.025 Score=54.23 Aligned_cols=71 Identities=17% Similarity=0.324 Sum_probs=53.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------CCHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
..+|.|||+|.+ |..++..|.+.|.+|+++.+.. .+.++ +..+|+||.++..
T Consensus 3 ~mkI~IiGaG~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAV-GGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHH-HHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 368999999875 9999999999999999987631 23333 5789999999985
Q ss_pred CCc---cc--CCCcCCCeEEEEee
Q 017438 292 PNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 292 p~~---v~--~d~ik~gavVIDvg 310 (371)
+.+ ++ ...++++++||.+-
T Consensus 81 ~~~~~~~~~l~~~l~~~~~iv~~~ 104 (335)
T 3ghy_A 81 PALESVAAGIAPLIGPGTCVVVAM 104 (335)
T ss_dssp HHHHHHHGGGSSSCCTTCEEEECC
T ss_pred hhHHHHHHHHHhhCCCCCEEEEEC
Confidence 432 11 24577899998864
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.032 Score=52.32 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcc--cHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNI--VGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~--VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++- +|+.++..|+++|++|.++.++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 589999999999754 6999999999999999998765
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.026 Score=50.60 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999999889999999999999999998765
|
| >3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.057 Score=54.16 Aligned_cols=147 Identities=18% Similarity=0.213 Sum_probs=95.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCC---CCCCCHHHHHhhCCccccc-Ccc-
Q 017438 130 NKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPL---PCHIDEQSILNAVSMEKDV-DGF- 200 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~----~~el~~~I~~LN~D~~V~GIlVqlPL---p~~i~~~~i~~~I~p~KDV-Dgl- 200 (371)
+=..++.++|.++.++. ...+ -|-+.+.++-|..- +|+|.+--|. ..|-..+++.+... ++. +|+
T Consensus 80 SFE~A~~~LGg~~i~l~--~~~ssl~kGEsl~DTarvLs~y--~D~IviRh~~~~g~~~~~~~~la~~~~--~~~~~~v~ 153 (399)
T 3q98_A 80 SYASALNLLGLAQQDLD--EGKSQIAHGETVRETANMISFC--ADAIGIRDDMYLGAGNAYMREVGAALD--DGYKQGVL 153 (399)
T ss_dssp HHHHHHHHHTCEEEECC---------CCTTHHHHHHHTCTT--EEEEEEEECCCCCC---HHHHHHHHHH--HHHHTTSC
T ss_pred HHHHHHHHcCCeEEEeC--CccccCCCCCCHHHHHHHHHhh--CcEEEEeccccCCcchHHHHHHHHHhh--hhcccccc
Confidence 34678899999987653 2221 24588888888764 8999999774 22222223322221 000 222
Q ss_pred ----CcchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEE-------cCCcccHHHHHHHhccCCCeEE
Q 017438 201 ----HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVI-------GRSNIVGMPAALLLQREDATVS 266 (371)
Q Consensus 201 ----~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVI-------G~s~~VGkpla~lL~~~gAtVt 266 (371)
-.+|.| .+.+.||=+.+ ++.+.|+.|- .++|++|+++ |+++-|.+.++.++...|++|+
T Consensus 154 ~~~~PVINal-------~d~~HPtQaLaDl~TI~E~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~ 226 (399)
T 3q98_A 154 PQRPALVNLQ-------CDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVT 226 (399)
T ss_dssp SSCCEEEEEE-------CSSCCHHHHHHHHHHHHHHHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEE
T ss_pred cCCCcEEeCC-------CCCcCcHHHHHHHHHHHHHhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEE
Confidence 234542 24567998888 6667777663 4799999998 4555678999999999999999
Q ss_pred EEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 267 IVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 267 v~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
++.-. +.++.+.+++||+|.+-+
T Consensus 227 ~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 227 LAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKS 274 (399)
T ss_dssp EECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred EECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecC
Confidence 98532 246778899999999864
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.019 Score=54.71 Aligned_cols=94 Identities=14% Similarity=0.009 Sum_probs=60.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~ 277 (371)
||...-.+..|.+..---.|++|+|+|+++.+|..+++++...|++|+++.++.. ++.+
T Consensus 137 ~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~ 216 (345)
T 2j3h_A 137 GMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTA 216 (345)
T ss_dssp SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHH
T ss_pred cccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHH
Confidence 3333334455533322236999999998666799999999999999988765421 2222
Q ss_pred hc-----cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 278 IT-----RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l-----~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
.+ ...|+||.++|.+.+ ---+.++++..++.+|..
T Consensus 217 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp HHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCG
T ss_pred HHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccc
Confidence 22 247888888886322 123567887788888864
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.042 Score=55.49 Aligned_cols=53 Identities=30% Similarity=0.406 Sum_probs=44.8
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 217 FIPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 217 ~~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
..+.|..|++.. +++.+.+++||+|+|.|.|+ ||..++.+|.+.|++|+ ++.+
T Consensus 193 r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~Gn-VG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 193 RDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQ-VGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEEET
T ss_pred CccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence 347888887655 55689999999999999988 59999999999999877 7776
|
| >4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A | Back alignment and structure |
|---|
Probab=94.72 E-value=0.052 Score=55.22 Aligned_cols=120 Identities=15% Similarity=0.127 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCcccHHH-HHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcC-CCeEEEEeeecCC
Q 017438 237 KGKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK-PGAVIIDVGINPV 314 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkp-la~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik-~gavVIDvgin~~ 314 (371)
+.|+|.|||.|++ |.. +|.+|.++|+.|++++.+.....+.+++..|-|. .|. .++.+. ...+|+-=|+++.
T Consensus 21 ~~~~v~viGiG~s-G~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~-~g~----~~~~~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 21 RVRHIHFVGIGGA-GMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIY-FHH----RPENVLDASVVVVSTAISAD 94 (494)
T ss_dssp -CCEEEEETTTST-THHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEE-SSC----CGGGGTTCSEEEECTTSCTT
T ss_pred cCCEEEEEEEcHh-hHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEE-CCC----CHHHcCCCCEEEECCCCCCC
Confidence 5689999999997 995 8999999999999998764333233332222221 110 111121 2334444344331
Q ss_pred CCCC----CCCCceeecccchhh-hhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 315 EDAK----SPRGYRLVGDVCYEE-ACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 315 ~~~~----~~~g~kl~GDVd~~~-v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
. |. ...|-.+++++++-. ..+. ..+--|-|--|.-|+..|+.++++.+
T Consensus 95 ~-p~~~~a~~~gi~v~~~~e~l~~~~~~-~~~IaVTGTnGKTTTt~ml~~iL~~~ 147 (494)
T 4hv4_A 95 N-PEIVAAREARIPVIRRAEMLAELMRY-RHGIAVAGTHGKTTTTAMLSSIYAEA 147 (494)
T ss_dssp C-HHHHHHHHTTCCEEEHHHHHHHHHTT-SEEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred C-HHHHHHHHCCCCEEcHHHHHHHHhcC-CCEEEEecCCChHHHHHHHHHHHHhc
Confidence 0 00 001335777776422 1111 11223568899999999999998765
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.024 Score=52.64 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999999998888999999999999999998775
|
| >3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.016 Score=54.04 Aligned_cols=64 Identities=14% Similarity=0.256 Sum_probs=48.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCc---cc--CCCcCCCeEEEEee
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~---v~--~d~ik~gavVIDvg 310 (371)
.+|.|||.|.+ |.+++..|.+.|.+|+.+++. +.+++|| |.+++...+ +. ...+++|++|+|+.
T Consensus 7 mkI~IIG~G~~-G~sLA~~L~~~G~~V~~~~~~-----~~~~~aD--ilavP~~ai~~vl~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 7 LRVGIFDDGSS-TVNMAEKLDSVGHYVTVLHAP-----EDIRDFE--LVVIDAHGVEGYVEKLSAFARRGQMFLHTS 75 (232)
T ss_dssp CEEEEECCSCC-CSCHHHHHHHTTCEEEECSSG-----GGGGGCS--EEEECSSCHHHHHHHHHTTCCTTCEEEECC
T ss_pred cEEEEEeeCHH-HHHHHHHHHHCCCEEEEecCH-----HHhccCC--EEEEcHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 58999999885 999999999999999988763 3368899 555554321 21 13678999999974
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.028 Score=53.34 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 5799999999998888999999999999999998764
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.015 Score=57.76 Aligned_cols=71 Identities=11% Similarity=0.242 Sum_probs=51.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCCC----------------------------CHHhhccC--CcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRTK----------------------------NPEEITRQ--ADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t~----------------------------~l~~~l~~--ADIV 285 (371)
++|+|+|+|+ +|+.++..|.+.+ ..|+++.++.. ++++.+++ +|+|
T Consensus 2 ~kVlIiGaGg-iG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGAGG-VGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECCSH-HHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 5899999987 5999999999988 48999877521 13344555 8999
Q ss_pred EEccCCCC-c-ccCCCcCCCeEEEEee
Q 017438 286 ISAVGQPN-M-VRGSWIKPGAVIIDVG 310 (371)
Q Consensus 286 IsAvG~p~-~-v~~d~ik~gavVIDvg 310 (371)
|+++|... . +-...++.|..++|+.
T Consensus 81 in~ag~~~~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 81 LNIALPYQDLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp EECSCGGGHHHHHHHHHHHTCCEEESS
T ss_pred EECCCcccChHHHHHHHHhCCCEEEec
Confidence 99988421 1 2234467788899974
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.69 E-value=0.047 Score=51.02 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 57899999999989999999999999999998764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.027 Score=50.82 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 48 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA 48 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc
Confidence 357899999999999999999999999999999998753
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=94.68 E-value=0.02 Score=51.56 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35889999999999999999999999999999998775
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=94.68 E-value=0.047 Score=51.21 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++ -+|+.++..|+++|++|.++.++
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999973 35999999999999999998765
|
| >3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.12 Score=50.50 Aligned_cols=170 Identities=11% Similarity=0.091 Sum_probs=109.9
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.+..|..+. .-|-+.+.++-|..- +|+|.+--|- . ..++.+...-+
T Consensus 54 ~STRTR~SFE~A~~~LGg~~i~~~l~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~-----~-~~~~~lA~~~~--- 122 (328)
T 3grf_A 54 PSLRTRVSLETAMTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRM--VDICTARLAT-----K-EMMREMAQHAS--- 122 (328)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEEC----------CHHHHHHHHTTT--CSEEEEECSS-----H-HHHHHHHHHCS---
T ss_pred CCchHHHHHHHHHHHCCCeEEccccCccccCCCCCCHHHHHHHHHhh--CCEEEEecCC-----h-hHHHHHHHhCC---
Confidence 34444445678899999999885564311 124577888888774 7899988662 2 22222222112
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC------CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF------DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i------~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+-.+|.| .+.+.||=+.+ ++.+.|+.|. +++|+++++||-+ +-|.+.++..|...|++|+++.-.
T Consensus 123 vPVINag-------~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~ 195 (328)
T 3grf_A 123 VPCINAL-------DDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPD 195 (328)
T ss_dssp SCEEESS-------CSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CCEEeCC-------CCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECCh
Confidence 3455642 23567998888 6666666662 7999999999987 668999999998899999998422
Q ss_pred -----------------------------CCCHHhhccCCcEEEEc----cC-CC-----------Cc-ccCCCc---CC
Q 017438 272 -----------------------------TKNPEEITRQADIIISA----VG-QP-----------NM-VRGSWI---KP 302 (371)
Q Consensus 272 -----------------------------t~~l~~~l~~ADIVIsA----vG-~p-----------~~-v~~d~i---k~ 302 (371)
+.++++.+++||+|.+- .| .. .+ |+.+.+ ++
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~ 275 (328)
T 3grf_A 196 HKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSK 275 (328)
T ss_dssp SGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCT
T ss_pred HhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCC
Confidence 13667789999999974 35 11 12 555433 57
Q ss_pred CeEEEEee
Q 017438 303 GAVIIDVG 310 (371)
Q Consensus 303 gavVIDvg 310 (371)
+++|.=++
T Consensus 276 ~ai~mH~l 283 (328)
T 3grf_A 276 RSIFMNCL 283 (328)
T ss_dssp TCEEEECS
T ss_pred CCEEECCC
Confidence 88888776
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.038 Score=52.26 Aligned_cols=36 Identities=33% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|++|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999998765
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.017 Score=55.63 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=60.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH----hhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE----EIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~----~~l 279 (371)
.-.+..|.+..---.|++|+|+|+++.+|..+++++...|++|+++.++. .+.. +.+
T Consensus 148 ~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp HHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHh
Confidence 33444453222223699999999766679999999999999998876541 1221 222
Q ss_pred --cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 280 --RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
...|++|.++|.+.+- --+.++++..++.+|..
T Consensus 228 ~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 228 KGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp TTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCT
T ss_pred cCCCceEEEECCCchHHHHHHHhccCCCEEEEEecc
Confidence 2589999999976321 12457888888888864
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=94.65 E-value=0.03 Score=57.31 Aligned_cols=85 Identities=27% Similarity=0.422 Sum_probs=63.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC---------CCCHHhhccCCcEEE
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIII 286 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~---------t~~l~~~l~~ADIVI 286 (371)
+.+.|...+.+++|++|.|+|.+ +.-...++..|.++|++|.+..-. ..++++.++.||+||
T Consensus 340 i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vv 419 (478)
T 3g79_A 340 TVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIV 419 (478)
T ss_dssp HHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEE
T ss_pred HHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEE
Confidence 44455555678999999999943 223678899999999999998532 246788899999999
Q ss_pred EccCCCCcccCC--Cc----C-CCeEEEEe
Q 017438 287 SAVGQPNMVRGS--WI----K-PGAVIIDV 309 (371)
Q Consensus 287 sAvG~p~~v~~d--~i----k-~gavVIDv 309 (371)
.+|..+.|-..+ .+ + ++.+|+|.
T Consensus 420 i~t~~~~f~~~d~~~~~~~~~~~~~~i~D~ 449 (478)
T 3g79_A 420 VLAGHSAYSSLKADWAKKVSAKANPVIIDG 449 (478)
T ss_dssp ECSCCHHHHSCCHHHHHHHHCCSSCEEEES
T ss_pred EecCCHHHHhhhHHHHHHHhccCCCEEEEC
Confidence 999988774333 33 3 37799994
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.65 E-value=0.029 Score=54.38 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=63.7
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CC
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KN 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~ 274 (371)
.+||.....+..+.+..---.|.+|+|+|+|. +|..+++++...|+ +|+.+.+.. .+
T Consensus 173 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~ 251 (378)
T 3uko_A 173 LLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGT-VGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKP 251 (378)
T ss_dssp GGGTHHHHHHHHHHTTTCCCTTCCEEEECCSH-HHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSC
T ss_pred hhhhhHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchh
Confidence 34554444444443332223699999999966 69999999999998 788876432 12
Q ss_pred HHhhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeeec
Q 017438 275 PEEITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGIN 312 (371)
Q Consensus 275 l~~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgin 312 (371)
+.+.++ .+|+||.++|.+..+. -+.+++| -.++.+|..
T Consensus 252 ~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 252 IQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 222222 4899999999865542 3568886 888889864
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.65 E-value=0.031 Score=48.58 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCCC-----------CHHh--hccC--CcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK-----------NPEE--ITRQ--ADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t~-----------~l~~--~l~~--ADIVIsAvG~ 291 (371)
.+++|+|.|+++-+|+.++..|+++|+ +|+++.|+.. |+.+ .+.+ .|+||..+|.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~ 75 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGT 75 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhhhcEEEECeee
Confidence 478999999999999999999999998 9998876532 2221 1222 6899988774
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.012 Score=56.44 Aligned_cols=93 Identities=19% Similarity=0.198 Sum_probs=61.9
Q ss_pred cCCHHHHHHHHHH-hCCCC-----CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CC
Q 017438 219 PCTPKGCIELLHR-YGFDI-----KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KN 274 (371)
Q Consensus 219 PcTa~gvi~lL~~-~~i~l-----~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~ 274 (371)
||.....+..|.+ .++.. .|++|+|+|+++.+|..+++++...|++|+.+.++. .+
T Consensus 126 ~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~ 205 (346)
T 3fbg_A 126 PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKES 205 (346)
T ss_dssp HHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSC
T ss_pred chhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCcc
Confidence 4444444555533 33322 699999997666679999999999999999886642 12
Q ss_pred HHhhc-----cCCcEEEEccCCCCccc--CCCcCCCeEEEEeee
Q 017438 275 PEEIT-----RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 275 l~~~l-----~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgi 311 (371)
+.+.+ +..|+||.++|.+..+. -+.++++-.++.+|.
T Consensus 206 ~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 206 LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSC
T ss_pred HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECC
Confidence 22222 24899999998765432 246788777777764
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=94.63 E-value=0.035 Score=53.69 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=62.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CCH
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KNP 275 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~l 275 (371)
+||...-.+..+.+..---.|++|+|+|+|. +|..+++++...|+ +|+.+.+.. .++
T Consensus 172 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 250 (374)
T 2jhf_A 172 IGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPI 250 (374)
T ss_dssp GGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred hccHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhH
Confidence 4554444444443322223699999999865 69999999999999 788775432 123
Q ss_pred Hhhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeeecC
Q 017438 276 EEITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGINP 313 (371)
Q Consensus 276 ~~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgin~ 313 (371)
.+.++ .+|+||.++|.+..+. -+.++++ -.++.+|...
T Consensus 251 ~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~ 296 (374)
T 2jhf_A 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296 (374)
T ss_dssp HHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC
T ss_pred HHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCC
Confidence 22222 4899999999765432 2467888 8888888643
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.039 Score=53.37 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=62.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CCH
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KNP 275 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~l 275 (371)
+||...-.+..+.+..---.|++|+|+|+|. +|..+++++...|+ +|+.+.+.. .++
T Consensus 173 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 251 (374)
T 1cdo_A 173 LGCGVSTGFGAAVNTAKVEPGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPI 251 (374)
T ss_dssp GGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCH
T ss_pred hccHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhH
Confidence 4554444444443322223699999999865 69999999999999 788775431 123
Q ss_pred Hhhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeeec
Q 017438 276 EEITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGIN 312 (371)
Q Consensus 276 ~~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgin 312 (371)
.+.++ .+|+||.++|.+..+. -+.++++ -.++.+|..
T Consensus 252 ~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 252 SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp HHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence 33222 4899999999765432 2568888 788888864
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.018 Score=52.30 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999889999999999999999998775
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.018 Score=52.90 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999998888999999999999999998765
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.021 Score=52.42 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999889999999999999999999875
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.042 Score=50.94 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=43.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------C------HHhhccC--CcEEEEccCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------N------PEEITRQ--ADIIISAVGQP 292 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~------l~~~l~~--ADIVIsAvG~p 292 (371)
..-+-++|+|.|+++-+|+.++..|+++|++|+++.+... | +.+.++. .|+||..+|..
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 3456789999999999999999999999999999877532 2 2334443 79999888753
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=94.59 E-value=0.045 Score=52.64 Aligned_cols=95 Identities=12% Similarity=0.115 Sum_probs=61.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC----------------------
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------- 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------- 274 (371)
.+||.+..++..|.+..---.|.+|+|+|+++.+|..+++++...||+|+++-+...+
T Consensus 147 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~ 226 (357)
T 1zsy_A 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL 226 (357)
T ss_dssp HTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH
T ss_pred hhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc
Confidence 3455555556666554333469999999996668999999888899976655332111
Q ss_pred ----HHhhcc---CCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 275 ----PEEITR---QADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 275 ----l~~~l~---~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+.+.+. .+|+||.++|.+... .-+.++++-.++.+|.
T Consensus 227 ~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 227 RRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGG 271 (357)
T ss_dssp HSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCC
T ss_pred hHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEec
Confidence 111122 378888888865432 2356788878888874
|
| >2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.059 Score=54.41 Aligned_cols=150 Identities=19% Similarity=0.245 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-c----cc-c--C
Q 017438 129 RNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E----KD-V--D 198 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~----KD-V--D 198 (371)
-+=..++.++|.++.++.-... ..-|-+.+.++-|+.- +|+|.+--|...... ...++.+.- . +. | .
T Consensus 76 ~SFE~A~~~LGg~vi~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviRh~~~~g~~-~~~~~~lA~~~~~~~~~~~~~~ 152 (418)
T 2yfk_A 76 FSFASACNLLGLEVQDLDEGKSQISHGETVRETANMISFM--ADIIGIRDDMYIGKG-NAYMHEVSESVQEGYKDGVLEQ 152 (418)
T ss_dssp HHHHHHHHHHTCEEEEECC--------CHHHHHHHHTTTT--EEEEEEEECSSTTHH-HHHHHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHCCCeEEecCCCcccCCCCcCHHHHHHHHHHh--CcEEEEecccccCcc-hHHHHHHHHHHHhhhcccccCC
Confidence 3557789999999877643210 1124688899888875 789998877421111 222222211 1 10 0 1
Q ss_pred ccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEE-------cCCcccHHHHHHHhccCCCeEEEE
Q 017438 199 GFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVI-------GRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 199 gl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVI-------G~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
....+|.| .+.+.||=+.+ ++.+.++.|- .++|++|+++ |+++-|.+.++.+|...|++|+++
T Consensus 153 ~~PVINa~-------~~~~HPtQaLaDl~TI~E~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~ 225 (418)
T 2yfk_A 153 RPTLVNLQ-------CDIDHPTQAMADALHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLA 225 (418)
T ss_dssp CCEEEEEE-------ESSCCHHHHHHHHHHHHHHTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEE
T ss_pred CCeEEeCC-------CCccChHHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEE
Confidence 12244642 23567998888 6666666663 2899999999 566568999999999999999998
Q ss_pred eCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 269 HSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 269 h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
+-. +.++++.+++||+|.+-
T Consensus 226 ~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~ADVVytd 270 (418)
T 2yfk_A 226 HPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDADVVYPK 270 (418)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCSEEEEC
T ss_pred CCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEEc
Confidence 633 24577889999999985
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=94.58 E-value=0.045 Score=52.88 Aligned_cols=93 Identities=17% Similarity=0.138 Sum_probs=61.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CCHH
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KNPE 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~l~ 276 (371)
||...-.+..+.+..---.|++|+|+|+|. +|..+++++...|+ +|+.+.+.. .++.
T Consensus 173 ~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~ 251 (373)
T 1p0f_A 173 GCGFATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIY 251 (373)
T ss_dssp GTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHH
T ss_pred hhHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHH
Confidence 443333344443322223699999999865 69999999888898 787775431 1233
Q ss_pred hhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeeec
Q 017438 277 EITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGIN 312 (371)
Q Consensus 277 ~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgin 312 (371)
+.++ .+|+||.++|.+..+. -+.++++ -.++.+|..
T Consensus 252 ~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp HHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCC
T ss_pred HHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccC
Confidence 2222 5899999999765432 2568888 888888864
|
| >1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.05 Score=54.80 Aligned_cols=53 Identities=26% Similarity=0.333 Sum_probs=44.9
Q ss_pred ccccCCHHHHHHHH----HHhCCC-CCCCEEEEEcCCcccHHHHHHHhcc-CCCeEEEEe
Q 017438 216 LFIPCTPKGCIELL----HRYGFD-IKGKRAVVIGRSNIVGMPAALLLQR-EDATVSIVH 269 (371)
Q Consensus 216 ~~~PcTa~gvi~lL----~~~~i~-l~GK~vvVIG~s~~VGkpla~lL~~-~gAtVtv~h 269 (371)
+..++|+.|++..+ ++.+.+ ++||++.|+|.|++ |+.+|.+|.. .|++|..+.
T Consensus 185 ~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~V-G~~vA~~l~~~~G~kVv~~s 243 (419)
T 1gtm_A 185 GRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNA-GYYLAKIMSEDFGMKVVAVS 243 (419)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHH-HHHHHHHHHHhcCCEEEEEe
Confidence 44579999977654 457899 99999999999985 9999999999 999988664
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.028 Score=53.72 Aligned_cols=89 Identities=15% Similarity=0.071 Sum_probs=60.4
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH----hhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE----EIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~----~~l 279 (371)
.-.+..|++..---.|++|+|+|+++.+|..+++++...|++|+.+.++. .++. +.+
T Consensus 152 ~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp HHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHh
Confidence 33445554432123699999999966679999999999999988876531 1222 222
Q ss_pred --cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 280 --RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
...|+||.++| +..+. -+.++++-.++.+|..
T Consensus 232 ~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 232 GGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp TTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCC
T ss_pred CCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecC
Confidence 25899999999 44432 2457788788888864
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.57 E-value=0.017 Score=51.88 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 5799999999998889999999999999999998765
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=94.56 E-value=0.013 Score=56.17 Aligned_cols=53 Identities=23% Similarity=0.266 Sum_probs=45.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC-CC-CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS-RT-KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~-~t-~~l~~~l~~ADIVIsAvG~ 291 (371)
.+|+|.|+++-+|+.++..|+++|. +|+.+.+ .. .++.+.++++|+||..+|.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~ 56 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGV 56 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcC
Confidence 3799999999999999999999998 9999888 33 3467788899999988774
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=94.56 E-value=0.023 Score=51.90 Aligned_cols=38 Identities=32% Similarity=0.468 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 46889999999999889999999999999999998765
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.015 Score=53.61 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 367999999999999899999999999999999998763
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=94.52 E-value=0.051 Score=52.99 Aligned_cols=76 Identities=24% Similarity=0.408 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
...++|.|||+|. ||..++..|+.+|. +|.+++.. +.+. +.+++|||||.+
T Consensus 17 ~~~~kV~ViGaG~-vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~ 94 (331)
T 4aj2_A 17 VPQNKITVVGVGA-VGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIIT 94 (331)
T ss_dssp CCSSEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEEC
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEc
Confidence 4678999999976 59999999988885 78887543 1233 458999999999
Q ss_pred cCCCC---cccCCC-----------------cCCCeEEEEeeecCC
Q 017438 289 VGQPN---MVRGSW-----------------IKPGAVIIDVGINPV 314 (371)
Q Consensus 289 vG~p~---~v~~d~-----------------ik~gavVIDvgin~~ 314 (371)
.|.|. .-..|. ..|.++++-++ ||.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt-NPv 139 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS-NPV 139 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS-SSH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec-ChH
Confidence 99653 211121 25678888877 765
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.029 Score=51.04 Aligned_cols=54 Identities=20% Similarity=0.160 Sum_probs=44.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------CHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------~l~~~l~~ADIVIsAvG~ 291 (371)
+|+|+|.|+++-+|+.++..|+++|++|+++.|+.. .+.+.++..|+||..+|.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 368999999888999999999999999998876531 134567889999988875
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.057 Score=50.82 Aligned_cols=54 Identities=20% Similarity=0.231 Sum_probs=43.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-----CeEEEEeCCCC--------------------CHHhhccC---CcEEEEcc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-----ATVSIVHSRTK--------------------NPEEITRQ---ADIIISAV 289 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-----AtVtv~h~~t~--------------------~l~~~l~~---ADIVIsAv 289 (371)
||+|+|.|+++.+|+.++..|+++| ++|+++.+... .+.+.++. .|+||..+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 5799999999999999999999999 89998876421 13345666 89999887
Q ss_pred CC
Q 017438 290 GQ 291 (371)
Q Consensus 290 G~ 291 (371)
|.
T Consensus 81 ~~ 82 (364)
T 2v6g_A 81 WA 82 (364)
T ss_dssp CC
T ss_pred CC
Confidence 74
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.055 Score=52.39 Aligned_cols=54 Identities=20% Similarity=0.330 Sum_probs=42.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------------CCHHhhccCCcEEEEcc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAv 289 (371)
+.++|.|||+|. +|.+++..|+..+. +|.+++... .+ .+.+++||+||.++
T Consensus 4 ~~~kI~iiGaG~-vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 4 ARKKITLVGAGN-IGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTA 81 (321)
T ss_dssp CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcC
Confidence 457899999876 59999999988876 888875431 12 46789999999999
Q ss_pred CCC
Q 017438 290 GQP 292 (371)
Q Consensus 290 G~p 292 (371)
|.|
T Consensus 82 g~p 84 (321)
T 3p7m_A 82 GVP 84 (321)
T ss_dssp SCC
T ss_pred CcC
Confidence 965
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.49 E-value=0.015 Score=53.41 Aligned_cols=38 Identities=29% Similarity=0.516 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999889999999999999999998765
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=94.49 E-value=0.048 Score=52.06 Aligned_cols=51 Identities=27% Similarity=0.474 Sum_probs=39.9
Q ss_pred EEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCC--------------------------CCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRT--------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
+|+|||+|. +|.+++..|... +.+|+++.+.. .++++ +++||+||.++|.
T Consensus 2 kI~VIGaG~-vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred EEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 689999966 599999999875 67899886542 23433 7889999999986
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 80 p 80 (310)
T 1guz_A 80 P 80 (310)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.47 E-value=0.05 Score=52.58 Aligned_cols=56 Identities=27% Similarity=0.398 Sum_probs=44.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--C-------------------------CCHHhhccCCcEEEE
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--T-------------------------KNPEEITRQADIIIS 287 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--t-------------------------~~l~~~l~~ADIVIs 287 (371)
.+.++|.|||+|. +|.+++..|+..|. +|+++... . .+-.+.+++||+||.
T Consensus 6 ~~~~kv~ViGaG~-vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIi 84 (315)
T 3tl2_A 6 IKRKKVSVIGAGF-TGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVI 84 (315)
T ss_dssp CCCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEE
Confidence 3568999999966 59999999998888 89988765 1 011366899999999
Q ss_pred ccCCC
Q 017438 288 AVGQP 292 (371)
Q Consensus 288 AvG~p 292 (371)
++|.|
T Consensus 85 aag~p 89 (315)
T 3tl2_A 85 TAGIA 89 (315)
T ss_dssp CCSCC
T ss_pred eCCCC
Confidence 99865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.061 Score=50.58 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++++|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999998764
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=94.45 E-value=0.057 Score=52.20 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=62.0
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CC
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KN 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~ 274 (371)
.+||...-.+..+.+..---.|++|+|+|+|. +|..+++++...|+ +|+.+.+.. .+
T Consensus 175 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~ 253 (376)
T 1e3i_A 175 LIGCGFSSGYGAAINTAKVTPGSTCAVFGLGC-VGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKP 253 (376)
T ss_dssp GGGTHHHHHHHHHHTTSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred hhccHHHHHHHHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccch
Confidence 34554444444443322223699999999865 69999999999999 788775431 12
Q ss_pred HHhhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeee
Q 017438 275 PEEITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGI 311 (371)
Q Consensus 275 l~~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgi 311 (371)
+.+.++ .+|+||.++|.+..+. -++++++ -.++-+|.
T Consensus 254 ~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 254 VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 322222 4899999999765432 2567888 78888886
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.02 Score=52.94 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356899999999999989999999999999999999775
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.42 E-value=0.025 Score=54.64 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=63.3
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHH
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPE 276 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~ 276 (371)
.+||...-.+..+.+..---.|++|+|+|+|. +|..+++++...|+ .|+.+.+. ..++.
T Consensus 170 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~ 248 (371)
T 1f8f_A 170 PLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPV 248 (371)
T ss_dssp GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred HhcchHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHH
Confidence 34554444555553322223699999999865 69999998888898 67776543 12333
Q ss_pred hhcc-----CCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 277 EITR-----QADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 277 ~~l~-----~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
+.++ .+|+||.++|.+..+. -+.++++-.++.+|...
T Consensus 249 ~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 292 (371)
T 1f8f_A 249 AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ 292 (371)
T ss_dssp HHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred HHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCC
Confidence 2222 4899999999765432 35688888888898643
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.029 Score=53.28 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 589999999999988999999999999999999865
|
| >2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.41 E-value=0.015 Score=54.34 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=43.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeE-EEEeCCC--------------CCHHhhccCCcEEEEccCCCCc--ccCCCcCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATV-SIVHSRT--------------KNPEEITRQADIIISAVGQPNM--VRGSWIKP 302 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtV-tv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~--v~~d~ik~ 302 (371)
+|.|||.|.+ |..++..|.+. .+| .+++++. .++++.++++|+||.+++.... +-.+..++
T Consensus 4 ~I~iIG~G~m-G~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~~~~v~~~l~~~ 81 (276)
T 2i76_A 4 VLNFVGTGTL-TRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIKTVANHLNLG 81 (276)
T ss_dssp CCEEESCCHH-HHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTTHHHHHTTTCCS
T ss_pred eEEEEeCCHH-HHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHHHHHHHHHhccC
Confidence 6899999885 99999999887 788 4776642 2344556789999999985432 11122267
Q ss_pred CeEEEEee
Q 017438 303 GAVIIDVG 310 (371)
Q Consensus 303 gavVIDvg 310 (371)
+.+|||+.
T Consensus 82 ~~ivi~~s 89 (276)
T 2i76_A 82 DAVLVHCS 89 (276)
T ss_dssp SCCEEECC
T ss_pred CCEEEECC
Confidence 88999986
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.037 Score=52.51 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=41.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|||+|. +|.+++..|...| .+|++++++. .++ +.+++||+||.+++.
T Consensus 2 ~kI~VIGaG~-~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 4799999877 5999999999888 6899886542 133 456789999999997
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 80 ~~ 81 (309)
T 1hyh_A 80 IK 81 (309)
T ss_dssp GG
T ss_pred cc
Confidence 54
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.021 Score=51.55 Aligned_cols=34 Identities=38% Similarity=0.412 Sum_probs=31.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
.++||.++|.|+++-+|+.++..|+++|++|.+.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIH 37 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence 4789999999998888999999999999999885
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=94.40 E-value=0.024 Score=51.68 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999888999999999999999998775
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.041 Score=53.09 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=62.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------CC
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------KN 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~~ 274 (371)
.+||.....+..+.+..---.|++|+|+|+|. +|..+++++...|+ +|+.+.+.. .+
T Consensus 170 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~ 248 (373)
T 2fzw_A 170 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGG-VGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKP 248 (373)
T ss_dssp GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSC
T ss_pred hhccHHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccccc
Confidence 34554443444443322223699999999865 69999999988998 787775431 12
Q ss_pred HHhhcc-----CCcEEEEccCCCCccc--CCCcCCC-eEEEEeeec
Q 017438 275 PEEITR-----QADIIISAVGQPNMVR--GSWIKPG-AVIIDVGIN 312 (371)
Q Consensus 275 l~~~l~-----~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgin 312 (371)
+.+.++ .+|+||.++|.+..+. -+.++++ -.++.+|..
T Consensus 249 ~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 249 IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecC
Confidence 322222 4899999999765432 3568888 888888864
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.024 Score=52.70 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 4789999999999989999999999999999999875
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=94.40 E-value=0.03 Score=50.92 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=35.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 49 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS 49 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3468899999999999899999999999999999988753
|
| >3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A | Back alignment and structure |
|---|
Probab=94.39 E-value=0.051 Score=55.20 Aligned_cols=52 Identities=25% Similarity=0.378 Sum_probs=43.9
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 218 IPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 218 ~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
.+.|..|++.. +++.+.+++||+|+|.|.|+ ||..++.+|.++|++|+ ++.+
T Consensus 211 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGn-VG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 211 RDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGN-VGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp TTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEECS
T ss_pred CcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence 46888887655 55689999999999999988 59999999999999876 6665
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=94.38 E-value=0.013 Score=56.26 Aligned_cols=90 Identities=20% Similarity=0.113 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCCC--CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------CCHHhhc
Q 017438 223 KGCIELLHRYGFDIKG--KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEEIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~G--K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~~l~~~l 279 (371)
.-.+..|.+..---.| ++|+|.|+++.+|..+++++...|+ +|+++.++. .++.+.+
T Consensus 144 ~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 144 LTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQL 223 (357)
T ss_dssp HHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence 3445555333222358 9999999966679999999999999 998876542 1111111
Q ss_pred ----c-CCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 280 ----R-QADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ----~-~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
. ..|+||.++|...+ ---+.++++-.++.+|..
T Consensus 224 ~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp HHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCG
T ss_pred HHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCc
Confidence 1 37888888885221 112457777778888854
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.06 Score=49.65 Aligned_cols=53 Identities=21% Similarity=0.162 Sum_probs=42.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCCC-----------------------HHhhccCCcEEEEccC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTKN-----------------------PEEITRQADIIISAVG 290 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~~-----------------------l~~~l~~ADIVIsAvG 290 (371)
.|+|+|.|+++-+|+.++..|+++| ++|+++.|+... +.+.++.+|+||..+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 5899999998889999999999988 899998776322 2345667788887665
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.37 E-value=0.064 Score=49.48 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=43.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------------CHHhhccCCcEEEEc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------------NPEEITRQADIIISA 288 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------------~l~~~l~~ADIVIsA 288 (371)
.++|+|.|+++-+|+.++..|+++|.+|+++.|... .+.+.++.+|+||..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 478999999888999999999999999998877521 133556778888887
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|..
T Consensus 84 a~~~ 87 (313)
T 1qyd_A 84 LAGG 87 (313)
T ss_dssp CCCS
T ss_pred Cccc
Confidence 7743
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=94.36 E-value=0.034 Score=54.36 Aligned_cols=54 Identities=20% Similarity=0.330 Sum_probs=42.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
..++|.|||+|. ||.+++..|+..|. +|.+++.. +.+.++ +++||+||.++
T Consensus 20 ~~~kV~ViGaG~-vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDA-VGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTH-HHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeC
Confidence 467999999966 59999999988885 78887643 124443 89999999999
Q ss_pred CCC
Q 017438 290 GQP 292 (371)
Q Consensus 290 G~p 292 (371)
|.|
T Consensus 98 G~p 100 (330)
T 3ldh_A 98 GAR 100 (330)
T ss_dssp SCC
T ss_pred CCC
Confidence 965
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=94.36 E-value=0.042 Score=50.07 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCcc--cHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNI--VGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~--VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++. +|+.++..|+++|++|+++.+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 4689999999999855 7999999999999999988654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=94.34 E-value=0.049 Score=51.04 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+|+|+|.|+++-+|+.++..|+++|++|+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 589999999888999999999999999998865
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.33 E-value=0.026 Score=52.14 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999999999999999999999998775
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=94.31 E-value=0.053 Score=50.78 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+|+|.|+++-+|+.++..|+++|++|+.+.++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 38 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 378999999999989999999999999999876554
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.028 Score=49.56 Aligned_cols=70 Identities=17% Similarity=0.298 Sum_probs=50.8
Q ss_pred EEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCC---c
Q 017438 240 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPN---M 294 (371)
Q Consensus 240 ~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~---~ 294 (371)
++.|+| .|. +|+.++..|.+.|.+|++++++.. ++.+.++++|+||.+++... .
T Consensus 2 ~i~iiGa~G~-~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~~~~~ 80 (212)
T 1jay_A 2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT 80 (212)
T ss_dssp EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHH
T ss_pred eEEEEcCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhhHHHH
Confidence 689999 665 599999999999999999987521 23345678999999998422 1
Q ss_pred ccC--CCcCCCeEEEEeee
Q 017438 295 VRG--SWIKPGAVIIDVGI 311 (371)
Q Consensus 295 v~~--d~ik~gavVIDvgi 311 (371)
+.. +.+ ++.++||+..
T Consensus 81 ~~~l~~~~-~~~~vi~~~~ 98 (212)
T 1jay_A 81 ARDLKNIL-REKIVVSPLV 98 (212)
T ss_dssp HHHTHHHH-TTSEEEECCC
T ss_pred HHHHHHHc-CCCEEEEcCC
Confidence 211 123 4889999873
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.025 Score=52.35 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999888999999999999999998775
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=94.27 E-value=0.02 Score=54.87 Aligned_cols=84 Identities=13% Similarity=0.265 Sum_probs=60.0
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHHhhc------
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPEEIT------ 279 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~~~l------ 279 (371)
+..|+..++ .|++|+|+|+|. +|..+++++...|+ +|+.+.++. .++.+.+
T Consensus 158 ~~~l~~~~~--~g~~VlV~GaG~-vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 158 VDTVLAGPI--SGKSVLITGAGP-LGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp HHHHTTSCC--TTCCEEEECCSH-HHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTT
T ss_pred HHHHHhcCC--CCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCC
Confidence 344444455 899999999955 69999999999999 888875431 2333222
Q ss_pred cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 280 RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccC
Confidence 25899999999755432 2457888889999864
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.045 Score=53.56 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
...+++|+|.|+++.+|+.++..|+++|++|+++.|...
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 356889999999999999999999999999998877654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.035 Score=50.90 Aligned_cols=39 Identities=31% Similarity=0.325 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++..
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 69 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP 69 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 588999999999988999999999999999999887654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.033 Score=50.54 Aligned_cols=38 Identities=29% Similarity=0.323 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 47899999999999999999999999999999987764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.25 E-value=0.037 Score=50.39 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=31.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999889999999999999999998765
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.025 Score=50.48 Aligned_cols=53 Identities=11% Similarity=0.221 Sum_probs=41.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------C---HHh-hccCCcEEEEccCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------N---PEE-ITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~---l~~-~l~~ADIVIsAvG~p~ 293 (371)
+|+|+|.|. +|+.++..|.++|..|+++.++.. + +++ .+.+||+||.+++...
T Consensus 2 ~iiIiG~G~-~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGGET-TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECCHH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 689999977 599999999999999999976521 1 223 2678999999998643
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.057 Score=50.81 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=58.5
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhh---------------ccCC
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI---------------TRQA 282 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~---------------l~~A 282 (371)
+||...-.+..|+..+ --.|++|+|+|+ +.+|..+++++...|++|+.+. ...+++.. -+.+
T Consensus 124 l~~~~~ta~~al~~~~-~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~ 200 (315)
T 3goh_A 124 LPCPLLTAWQAFEKIP-LTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKY 200 (315)
T ss_dssp SHHHHHHHHHHHTTSC-CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCE
T ss_pred CccHHHHHHHHHhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCc
Confidence 3444455566663333 246999999999 5579999999999999988876 43332211 2468
Q ss_pred cEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 283 DIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 283 DIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
|+||.++|.+.+- --+.++++-.++.+|..
T Consensus 201 Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 231 (315)
T 3goh_A 201 FAIFDAVNSQNAAALVPSLKANGHIICIQDR 231 (315)
T ss_dssp EEEECC-------TTGGGEEEEEEEEEECCC
T ss_pred cEEEECCCchhHHHHHHHhcCCCEEEEEeCC
Confidence 9999999976552 23467888888888743
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.089 Score=49.05 Aligned_cols=53 Identities=21% Similarity=0.333 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~~l~~ADIVIsAvG~ 291 (371)
.+|+|.|+++-+|+.++..|+++|++|+++.+.... +.+.++..|+||..+|.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 479999999989999999999999999998775321 33456778999987774
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.17 E-value=0.029 Score=51.40 Aligned_cols=37 Identities=22% Similarity=0.333 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999998765
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.029 Score=51.17 Aligned_cols=38 Identities=34% Similarity=0.430 Sum_probs=34.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR 41 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999999987753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=94.16 E-value=0.035 Score=52.03 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++|+||.++|-|++.=+|+.+|..|+++||+|.++.++.
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~ 43 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA 43 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 589999999999998889999999999999999998764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=94.14 E-value=0.037 Score=50.42 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLP 35 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999999889999999999999999998765
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.019 Score=53.67 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=50.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccC-----C-CeEEEEeCCC--------C-------------------CHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE-----D-ATVSIVHSRT--------K-------------------NPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~-----g-AtVtv~h~~t--------~-------------------~l~~~l~~ADIV 285 (371)
.+|.|||.|.+ |.+++..|.+. | .+|+++++.. . +..+.+.++|+|
T Consensus 9 m~I~iiG~G~m-G~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGV-GGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHH-HHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHH-HHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 37999999885 99999999988 8 8999987621 0 111235689999
Q ss_pred EEccCCCCc---cc--CCCcCCCeEEEEe
Q 017438 286 ISAVGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 286 IsAvG~p~~---v~--~d~ik~gavVIDv 309 (371)
|.++..+.+ +. ...++++.+||++
T Consensus 88 il~vk~~~~~~v~~~i~~~l~~~~~iv~~ 116 (317)
T 2qyt_A 88 LFCTKDYDMERGVAEIRPMIGQNTKILPL 116 (317)
T ss_dssp EECCSSSCHHHHHHHHGGGEEEEEEEEEC
T ss_pred EEecCcccHHHHHHHHHhhcCCCCEEEEc
Confidence 999987653 11 1346678888886
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.12 E-value=0.027 Score=51.75 Aligned_cols=38 Identities=16% Similarity=0.118 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-.++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 35799999999999888999999999999999998775
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.042 Score=50.61 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=43.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCCC-------------------CHHhhcc--CCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRTK-------------------NPEEITR--QADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t~-------------------~l~~~l~--~ADIVIsAvG~ 291 (371)
+|+|+|.|+++-+|+.++..|+++ |++|+++.++.. .+.+.++ ..|+||..+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 578999999998999999999998 899999876532 1234455 78999988875
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=94.10 E-value=0.053 Score=53.25 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=52.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCCC----------CH------HhhccCCcEEEEccCCCC--ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRTK----------NP------EEITRQADIIISAVGQPN--MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t~----------~l------~~~l~~ADIVIsAvG~p~--~v~ 296 (371)
|-+|.|||++|.+|.-+..+|.+++ .++..+.+... ++ .+.+.++|+||.|+|.-. -.-
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a 80 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQA 80 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHHHHHH
Confidence 4589999999999999999998873 35665554321 11 123578999999998411 112
Q ss_pred CCCcCCCeEEEEeeecC
Q 017438 297 GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~ 313 (371)
+..++.|+.|||.....
T Consensus 81 ~~~~~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 81 PRFAAAGVTVIDNSSAW 97 (344)
T ss_dssp HHHHHTTCEEEECSSTT
T ss_pred HHHHhCCCEEEECCCcc
Confidence 23457799999999765
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.048 Score=49.10 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999998765
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.031 Score=51.24 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------C------HHhhccC-CcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------N------PEEITRQ-ADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------~------l~~~l~~-ADIVIsAvG 290 (371)
++++|+|.|+ +-+|+.++..|+++|.+|+++.|+.. | +.+.++. .|+||..+|
T Consensus 2 ~~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 4689999997 56799999999999999999987632 1 2334444 899997765
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=94.07 E-value=0.016 Score=54.74 Aligned_cols=92 Identities=24% Similarity=0.280 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHhCCCCC-CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhh--------------------
Q 017438 220 CTPKGCIELLHRYGFDIK-GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI-------------------- 278 (371)
Q Consensus 220 cTa~gvi~lL~~~~i~l~-GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~-------------------- 278 (371)
+|+...+..+++.++... |+ |+|+|+++.+|..+++++...|++|+.+.++..+++..
T Consensus 129 ~ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~ 207 (324)
T 3nx4_A 129 FTAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPL 207 (324)
T ss_dssp HHHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSS
T ss_pred HHHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhh
Confidence 455556666666655443 56 99999966689999999999999998877553322210
Q ss_pred c-cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 279 T-RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l-~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
. ...|++|.++|.+.+ ---+.++++-.++.+|..
T Consensus 208 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 208 EKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp CCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred cCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecC
Confidence 0 235777777775422 112456777778888754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.07 E-value=0.043 Score=49.84 Aligned_cols=37 Identities=11% Similarity=0.082 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 4678999999999889999999999999999988554
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.026 Score=51.71 Aligned_cols=38 Identities=29% Similarity=0.283 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 45899999999998889999999999999999998775
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.052 Score=49.16 Aligned_cols=36 Identities=31% Similarity=0.291 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999999889999999999999999887653
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.032 Score=53.86 Aligned_cols=74 Identities=19% Similarity=0.283 Sum_probs=55.9
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---CCHH----------------hhc----cCCcEEEEccCCCCc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---KNPE----------------EIT----RQADIIISAVGQPNM 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---~~l~----------------~~l----~~ADIVIsAvG~p~~ 294 (371)
|++|+|+|+|+ +|..+++++...|++|+++.++. ..++ +.+ ..+|+||.++|.+..
T Consensus 181 g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 259 (366)
T 2cdc_A 181 CRKVLVVGTGP-IGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVN 259 (366)
T ss_dssp TCEEEEESCHH-HHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTH
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHH
Confidence 99999999955 69999999999999999887754 2221 111 247999999998755
Q ss_pred c-c--CCCcCCCeEEEEeeec
Q 017438 295 V-R--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v-~--~d~ik~gavVIDvgin 312 (371)
+ . -+.++++..++.+|..
T Consensus 260 ~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 260 ILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp HHHHHGGGEEEEEEEEECSCC
T ss_pred HHHHHHHHHhcCCEEEEEecC
Confidence 4 3 3567888888888864
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.01 E-value=0.024 Score=51.66 Aligned_cols=37 Identities=32% Similarity=0.427 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999998765
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=94.00 E-value=0.057 Score=48.72 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhcc-CCCeEEEEeCCCC-----------C------HHhhcc-----CCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQR-EDATVSIVHSRTK-----------N------PEEITR-----QADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~-~gAtVtv~h~~t~-----------~------l~~~l~-----~ADIVIsAvG~ 291 (371)
.+||+++|.|+++-+|+.++..|++ .|+.|.++.+... | +++.+. .-|+||+.+|.
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~ 80 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI 80 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 4789999999998899999999998 7889988876532 1 122222 56999988885
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=94.00 E-value=0.06 Score=49.03 Aligned_cols=53 Identities=9% Similarity=0.101 Sum_probs=42.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCCCC---------------------HHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRTKN---------------------PEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t~~---------------------l~~~l~~ADIVIsAvG~ 291 (371)
|+|+|.|+++-+|+.++..|+++ |++|+++.|+... +.+.++.+|+||..+|.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57999999888999999999998 9999998775321 33456778888877663
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=93.96 E-value=0.019 Score=54.90 Aligned_cols=92 Identities=18% Similarity=0.233 Sum_probs=64.0
Q ss_pred ccCCHHHHHHHHHHh-----CCCCCCCEEEEEcCCcccHHHHHHHhccC--CCeEEEEeCCCC--------------CH-
Q 017438 218 IPCTPKGCIELLHRY-----GFDIKGKRAVVIGRSNIVGMPAALLLQRE--DATVSIVHSRTK--------------NP- 275 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~-----~i~l~GK~vvVIG~s~~VGkpla~lL~~~--gAtVtv~h~~t~--------------~l- 275 (371)
+||.....+..|+.. ++ .|++|+|+|+| .+|..+++++... |++|+.+.++.. +.
T Consensus 148 l~~~~~ta~~al~~~~~~~~~~--~g~~VlV~GaG-~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~ 224 (344)
T 2h6e_A 148 LADAGTTSMGAIRQALPFISKF--AEPVVIVNGIG-GLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMK 224 (344)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTC--SSCEEEEECCS-HHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHH
T ss_pred hhhhhHHHHHHHHhhhhcccCC--CCCEEEEECCC-HHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccc
Confidence 355545556666665 55 89999999996 4699999999888 999888765421 11
Q ss_pred ------Hhhc--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 276 ------EEIT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ------~~~l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
++.. +.+|+||.++|.+..+. -+.++++-.++.+|..
T Consensus 225 ~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 225 DAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred cchHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCC
Confidence 1112 15899999999864332 2457888888888864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 371 | ||||
| d1a4ia1 | 170 | c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehy | 4e-60 | |
| d1b0aa1 | 166 | c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehy | 3e-57 | |
| d1edza2 | 146 | c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/ | 3e-48 | |
| d1edza1 | 171 | c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehy | 1e-43 | |
| d1a4ia2 | 125 | c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/ | 2e-38 | |
| d1b0aa2 | 121 | c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/ | 3e-38 |
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 4e-60
Identities = 93/167 (55%), Positives = 116/167 (69%)
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
+N GRLA FIPCTPKGC+EL+ G I G+ AVV+GRS IVG P LL
Sbjct: 1 LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLL 60
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
+ATV+ HS+T + +E + DI++ A GQP MV+G WIKPGA++ID GIN V D K
Sbjct: 61 WNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKK 120
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 366
P G ++VGDV Y+EA E AS ITPVPGGVGPMT+AML+ +T+ SAKR
Sbjct: 121 PNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKR 167
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Score = 181 bits (461), Expect = 3e-57
Identities = 84/172 (48%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQ 259
FHP N+GRL R P PCTP+G + LL RY D G AVVIG SNIVG P ++ L
Sbjct: 1 FHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 58
Query: 260 REDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319
T ++ H TKN AD++I AVG+P + G WIK GA++IDVGIN +E+
Sbjct: 59 LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLEN--- 115
Query: 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371
++VGDV +E+A + AS ITPVPGGVGPMT+A L+ NTL + H+ Q
Sbjct: 116 ---GKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQ 164
|
| >d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 158 bits (400), Expect = 3e-48
Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 6/148 (4%)
Query: 80 AKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+ I VA+ EI V K G P L L + + Y +K +S+
Sbjct: 3 GRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESM 62
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G L + + + I N D SV+GI+V P+ + +Q + V EKDV+
Sbjct: 63 GFRY---DLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVE 119
Query: 199 GFHPLNIGRLAMRGREPLFIPCTPKGCI 226
G + + L I
Sbjct: 120 GLNHVYYQNLYH--NVRYLDKENRLKSI 145
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 146 bits (370), Expect = 1e-43
Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 53/183 (28%)
Query: 219 PCTPKGCIELLHRY---------GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269
PCTP +++L G + GK+ +VI RS IVG P A LL + ATV V
Sbjct: 1 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD 60
Query: 270 SRTKN-------------------------PEEITRQADIIISAVGQPNM-VRGSWIKPG 303
++ + +D++I+ V N +IK G
Sbjct: 61 VNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEG 120
Query: 304 AVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTS 363
AV I+ ++ E AS P+ G V TIAMLL N L
Sbjct: 121 AVCINFACT---------------KNFSDDVKEKASLYVPMTGKV---TIAMLLRNMLRL 162
Query: 364 AKR 366
+
Sbjct: 163 VRN 165
|
| >d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 2e-38
Identities = 52/125 (41%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQ 136
A A++++GK ++ QIR + +V+++K+ + G P LA++ VG+R DS Y+ K KA +
Sbjct: 1 APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAE 60
Query: 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSME 194
+GI + + LP T+E EV+K+I+ N+D +VHG LVQLPL I+ + ++NA++ E
Sbjct: 61 EIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE 120
Query: 195 KDVDG 199
KDVDG
Sbjct: 121 KDVDG 125
|
| >d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 121 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Score = 131 bits (330), Expect = 3e-38
Identities = 58/121 (47%), Positives = 76/121 (62%)
Query: 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSV 138
+AK+IDGK +A+Q+R E+ +V A PGLAV+LVG S YV +K+KAC+ V
Sbjct: 1 AAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEV 60
Query: 139 GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198
G S LPE TSE E+L+ I N D ++ GILVQLPLP ID +L + +KDVD
Sbjct: 61 GFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVD 120
Query: 199 G 199
G
Sbjct: 121 G 121
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 100.0 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 100.0 | |
| d1edza2 | 146 | Tetrahydrofolate dehydrogenase/cyclohydrolase {Bak | 100.0 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 100.0 | |
| d1b0aa2 | 121 | Tetrahydrofolate dehydrogenase/cyclohydrolase {Esc | 100.0 | |
| d1a4ia2 | 125 | Tetrahydrofolate dehydrogenase/cyclohydrolase {Hum | 100.0 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 99.65 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 99.61 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 99.59 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 99.57 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 99.51 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 99.21 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 99.02 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 99.01 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.66 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.57 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.48 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 98.28 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 98.13 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 98.13 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 98.04 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 98.02 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 98.0 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 97.99 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 97.85 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.8 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.76 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.74 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.74 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.65 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.56 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.44 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.39 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.37 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.29 | |
| d1vi2a2 | 102 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.27 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.22 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.99 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.97 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 96.96 | |
| d1p77a2 | 101 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.95 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.9 | |
| d1nvta2 | 110 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.9 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.88 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.87 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.83 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.82 | |
| d1nyta2 | 101 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.82 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.8 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.78 | |
| d1npya2 | 102 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.74 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.73 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 96.73 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.71 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.67 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 96.63 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.63 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.62 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.59 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.57 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.56 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.55 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.53 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 96.53 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 96.5 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.49 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.49 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 96.49 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.47 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.46 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.43 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.41 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.39 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 96.37 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.37 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 96.36 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 96.34 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.33 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.33 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.31 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.3 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 96.28 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.25 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.25 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.23 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.22 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.2 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 96.19 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.19 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.18 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.18 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.17 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.16 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.15 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.15 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.15 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.12 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.11 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.08 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 96.08 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.05 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.03 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.02 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 96.01 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.01 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 95.99 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 95.96 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.95 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.93 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.92 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.91 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.91 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.88 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 95.87 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 95.84 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.84 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 95.83 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 95.83 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 95.82 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 95.78 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 95.77 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 95.75 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.7 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.69 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.66 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.65 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 95.64 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.61 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.59 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.58 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.55 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 95.54 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.5 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 95.43 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 95.42 | |
| d1pj3a1 | 294 | Mitochondrial NAD(P)-dependent malic enzyme {Human | 95.41 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 95.39 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.38 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 95.36 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.3 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.27 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.21 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.19 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.17 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 95.16 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.14 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.07 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 95.06 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.02 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.02 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 94.98 | |
| d1tuga1 | 310 | Aspartate carbamoyltransferase catalytic subunit { | 94.95 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 94.94 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 94.9 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 94.89 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.88 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 94.87 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 94.78 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 94.78 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.74 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 94.73 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 94.71 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 94.7 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 94.7 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 94.66 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 94.61 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.44 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.39 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.35 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.33 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 94.3 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 94.27 | |
| d1o0sa1 | 308 | Mitochondrial NAD(P)-dependent malic enzyme {Pig r | 94.25 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.12 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 94.11 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 93.99 | |
| d1mv8a3 | 136 | GDP-mannose 6-dehydrogenase, GDP-binding domain {P | 93.99 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 93.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 93.9 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 93.9 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 93.76 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 93.7 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 93.67 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 93.62 | |
| d1gq2a1 | 298 | Mitochondrial NAD(P)-dependent malic enzyme {Domes | 93.61 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.59 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 93.57 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 93.54 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 93.52 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 93.46 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.43 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.43 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 93.39 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 93.37 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.34 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 93.29 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 93.29 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.28 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 93.25 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.24 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.11 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.01 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 93.0 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 92.92 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 92.91 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.9 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 92.9 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 92.86 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 92.84 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 92.84 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 92.83 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 92.66 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.66 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.65 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 92.55 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.27 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 92.22 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 92.09 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 92.08 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 92.07 | |
| d1trba2 | 126 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 92.05 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 92.01 | |
| d1otha2 | 170 | Ornithine transcarbamoylase {Human (Homo sapiens) | 91.96 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 91.83 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.82 | |
| d1ml4a2 | 157 | Aspartate carbamoyltransferase catalytic subunit { | 91.63 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 91.59 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 91.53 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.44 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.4 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 91.37 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 91.35 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 91.26 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 91.23 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 91.15 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.14 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.06 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 91.01 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 90.88 | |
| d1dxha2 | 185 | Ornithine transcarbamoylase {Pseudomonas aeruginos | 90.63 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 90.56 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 90.52 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 90.51 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 90.51 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 90.37 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 90.31 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 90.27 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 90.23 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 89.94 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 89.72 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 89.7 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 89.66 | |
| d2h1qa1 | 251 | Hypothetical protein Dhaf_3308 {Desulfitobacterium | 89.59 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.36 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 89.28 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.23 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.52 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 88.37 | |
| d2at2a2 | 151 | Aspartate carbamoyltransferase catalytic subunit { | 88.16 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 88.14 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 88.04 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.04 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 88.03 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 87.52 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 87.2 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 87.08 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 86.8 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 86.74 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 86.68 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 86.43 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 86.08 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 85.97 | |
| d1duvg2 | 183 | Ornithine transcarbamoylase {Escherichia coli [Tax | 85.82 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 85.75 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 85.73 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 85.65 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 85.57 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 85.49 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 85.29 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.18 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 84.86 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 84.56 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 84.46 | |
| d1ekxa2 | 160 | Aspartate carbamoyltransferase catalytic subunit { | 84.22 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 83.64 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 83.59 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 83.49 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 83.47 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 83.44 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 83.44 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 83.19 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 82.67 | |
| d1j4aa2 | 134 | D-lactate dehydrogenase {Lactobacillus helveticus | 82.61 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 82.5 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 82.46 | |
| d1dlja3 | 108 | UDP-glucose dehydrogenase (UDPGDH), C-terminal (UD | 82.23 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 82.12 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 81.71 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 81.28 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 80.48 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 80.41 |
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.7e-56 Score=396.57 Aligned_cols=164 Identities=51% Similarity=0.876 Sum_probs=158.6
Q ss_pred cCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhc
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIT 279 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l 279 (371)
|||+|+|+|..| .+.|+||||.||+++|++|+++++||+|+|||||++||+|++++|.++|||||+||++|+++++++
T Consensus 1 fhp~N~G~l~~~--~~~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~ 78 (166)
T d1b0aa1 1 FHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV 78 (166)
T ss_dssp CSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred CCchhHHHHhCC--CCCCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH
Confidence 799999999976 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHH
Q 017438 280 RQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSN 359 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n 359 (371)
++|||||+|+|+|++|++||+|+|++|||+|+++.+++ +++||+||+++.++|+++|||||||||||++|||+|
T Consensus 79 ~~ADivI~a~G~p~~i~~~~vk~g~vvIDvGi~~~~~~------~~~Gdvd~~~v~~~a~~~TPvPGGVGP~Tva~L~~N 152 (166)
T d1b0aa1 79 ENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENG------KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIEN 152 (166)
T ss_dssp HHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECTTS------CEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHH
T ss_pred hhhhHhhhhccCcccccccccCCCcEEEecCceecCCC------CEEeccccHhHHhheeEeCCCCCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999998763 899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q 017438 360 TLTSAKRVHNFQ 371 (371)
Q Consensus 360 ~v~a~~~~~~~~ 371 (371)
+++++++|++-|
T Consensus 153 ~v~a~~~~~~~~ 164 (166)
T d1b0aa1 153 TLQACVEYHDPQ 164 (166)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHHHhCcc
Confidence 999999998754
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-55 Score=395.58 Aligned_cols=170 Identities=55% Similarity=0.911 Sum_probs=156.0
Q ss_pred cCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhc
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIT 279 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l 279 (371)
+|++|+|+|..|+.+++|+||||.||+++|++|+++++||+|+|||||++||||++++|+++||||++||++|+++++++
T Consensus 1 l~~~N~G~l~~g~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~ 80 (170)
T d1a4ia1 1 LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV 80 (170)
T ss_dssp CSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred CCccchhhHhcCCCCCCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence 68999999998866789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHH
Q 017438 280 RQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSN 359 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n 359 (371)
++|||||+|+|+|++++++|+|+|++|||+|+++.+++..+.|++++||+||+++.++|+++|||||||||||++|||+|
T Consensus 81 ~~aDivi~a~G~~~~i~~~~vk~g~iviDvgi~~~~~~~~~~~~~~~gdvd~~~v~~~a~~~TPvPGGVGp~Tva~L~~N 160 (170)
T d1a4ia1 81 NKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQS 160 (170)
T ss_dssp TTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC----------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHHHHH
T ss_pred hhccchhhccccccccccccccCCCeEeccCcccccccccCCCCEEecccchHhhhhhceEeCCCCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999999998776555677999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 017438 360 TLTSAKRVHN 369 (371)
Q Consensus 360 ~v~a~~~~~~ 369 (371)
+++++|+|+.
T Consensus 161 ~v~a~~r~l~ 170 (170)
T d1a4ia1 161 TVESAKRFLE 170 (170)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999999974
|
| >d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-42 Score=300.78 Aligned_cols=143 Identities=23% Similarity=0.246 Sum_probs=134.2
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
++++|||+++|++|++++++++++|+++. |++|+|++|+||+|++|..|+++|.|+|+++||+++. ++..+++|++
T Consensus 2 pgkiidG~~iA~~i~~~l~~~v~~l~~~~~g~~P~Lavilvg~d~aS~~Yv~~k~k~a~~~Gi~~~l---~~~~~~~~l~ 78 (146)
T d1edza2 2 PGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDL---RVIEDKDFLE 78 (146)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEE---EECSSGGGHH
T ss_pred CCeeccHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCcccc---CccchHHHHH
Confidence 46899999999999999999999998764 7999999999999999999999999999999999764 4556899999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHH
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCI 226 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi 226 (371)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|++|+|+|+.| ..++.||||+||+
T Consensus 79 ~~I~~LN~D~~V~GIlvQlPLP~~i~~~~i~~~I~p~KDVDGl~p~N~G~L~~~--~~~l~P~t~~~~i 145 (146)
T d1edza2 79 EAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHN--VRYLDKENRLKSI 145 (146)
T ss_dssp HHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTT--CCBSSSSSCSBCC
T ss_pred HHHHHHhcchhhhhhhhcCCCCcccCHHHHHHhcCCCCCcCCCChHhHHHHHcC--CCCCCCCCccCcc
Confidence 999999999999999999999999999999999999999999999999999976 7889999999864
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.6e-41 Score=300.96 Aligned_cols=133 Identities=35% Similarity=0.502 Sum_probs=122.3
Q ss_pred cCCHHHHHHHHHHhCC---------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------
Q 017438 219 PCTPKGCIELLHRYGF---------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------- 274 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i---------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------- 274 (371)
||||.||++||++|++ +++||+|+|||||++||+|+|.||+++|||||+||+++.+
T Consensus 1 PcTp~gv~~LL~~y~I~~~~~~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T d1edza1 1 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHV 80 (171)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEE
T ss_pred CCcHHHHHHHHHHcCcccccccccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeecc
Confidence 9999999999999998 9999999999999999999999999999999999987422
Q ss_pred ----------HHhhccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceecc
Q 017438 275 ----------PEEITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITP 343 (371)
Q Consensus 275 ----------l~~~l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTP 343 (371)
+++++++|||||+|+|.|++ ++.||+|+|++|||+|++++. ++++.++|++|||
T Consensus 81 ~~~~~~~~~~lk~~~~~aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~~~~---------------~~~v~~~a~~iTP 145 (171)
T d1edza1 81 EDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNF---------------SDDVKEKASLYVP 145 (171)
T ss_dssp EEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSCCB---------------CGGGGTTEEEEES
T ss_pred ccccccchhHHhhccccCCEEEEccCCCccccChhhcccCceEeeccccccc---------------ccchhheeeEEcC
Confidence 77888899999999999998 999999999999999987532 2467899999999
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 344 VPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 344 VPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
||||| |++|||+|+++++|+|..
T Consensus 146 VPGGV---TvamLl~N~v~a~~~~~~ 168 (171)
T d1edza1 146 MTGKV---TIAMLLRNMLRLVRNVEL 168 (171)
T ss_dssp CCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCHH---HHHHHHHHHHHHHHHHHh
Confidence 99997 999999999999998753
|
| >d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.9e-37 Score=259.09 Aligned_cols=121 Identities=48% Similarity=0.733 Sum_probs=118.6
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
+|+|||||++|++++++++++++.++++++++|+|++|+||+|++|..|+++|.|+|+++||+++.+.||++++|+||++
T Consensus 1 ~A~iLdGk~vA~~i~~~l~~~i~~~~~~~~~~P~LavI~vg~d~aS~~Yv~~k~k~a~~lGi~~~~~~l~~~~t~~~l~~ 80 (121)
T d1b0aa2 1 AAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLE 80 (121)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHH
T ss_pred CCEeccHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCChhHHHHHHHHHHHHHhhccceeeeeccccccHHHHHH
Confidence 47899999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|++||+|++|||||||+|||.|++++.++++|+|+|||||
T Consensus 81 ~I~~lN~d~~v~GIlvqlPLP~~i~~~~i~~~I~p~KDVDG 121 (121)
T d1b0aa2 81 LIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 121 (121)
T ss_dssp HHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTC
T ss_pred HHHHHhCCCchhhhhhcCCCCCCcCHHHHHhccCcCcCCCC
Confidence 99999999999999999999999999999999999999998
|
| >d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Tetrahydrofolate dehydrogenase/cyclohydrolase domain: Tetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-36 Score=255.60 Aligned_cols=121 Identities=42% Similarity=0.780 Sum_probs=117.6
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
+|+|||||++|++|++++++++++|+++. |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 2 ~a~iLdGk~vA~~i~~~lk~~v~~l~~~~~g~~P~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~el~ 81 (125)
T d1a4ia2 2 PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVM 81 (125)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHH
T ss_pred CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCChhHHHHHHHHHHHHHhccceEEEEecCcchhHHHHH
Confidence 47899999999999999999999998875 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCC--CCHHHHHhhCCcccccCc
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCH--IDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~--i~~~~i~~~I~p~KDVDg 199 (371)
+.|++||+|++|||||||+|||.| +++++++++|+|+|||||
T Consensus 82 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~~~i~~~I~p~KDVDG 125 (125)
T d1a4ia2 82 KYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDG 125 (125)
T ss_dssp HHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTC
T ss_pred HHHHHHhccCCcceEEEecCCCCCCCcCHHHHHhcCCCCcCCCC
Confidence 999999999999999999999986 999999999999999998
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=3.7e-16 Score=136.53 Aligned_cols=129 Identities=22% Similarity=0.280 Sum_probs=103.3
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC------------------HH-hhccCCc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------------------PE-EITRQAD 283 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~------------------l~-~~l~~AD 283 (371)
.|+++.|++.+++++||+|+|+|+|++ +|+++..|.+.|++|+|++|+... +. ....++|
T Consensus 3 ~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~d 81 (170)
T d1nyta1 3 VGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFD 81 (170)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCS
T ss_pred hHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence 789999999999999999999999997 999999999999999999987321 11 1245789
Q ss_pred EEEEccCC---C--CcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHH
Q 017438 284 IIISAVGQ---P--NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLS 358 (371)
Q Consensus 284 IVIsAvG~---p--~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~ 358 (371)
+||++|+. + ..++.+.++++++|+|+.|+|.+| +|.. .++..|+-+ +-+|.+ ||++
T Consensus 82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T-------~ll~------~A~~~G~~~-~i~Gl~-----MLi~ 142 (170)
T d1nyta1 82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKT-------PFLA------WCEQRGSKR-NADGLG-----MLVA 142 (170)
T ss_dssp EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCC-------HHHH------HHHHTTCCE-EECTHH-----HHHH
T ss_pred eeecccccCcccCCCCCcHHHhccCcEEEEeecCCCCC-------HHHH------HHHHcCCCc-ccCCHH-----HHHH
Confidence 99988862 2 235667899999999999999887 4554 245556522 345666 9999
Q ss_pred HHHHHHHHHhcCC
Q 017438 359 NTLTSAKRVHNFQ 371 (371)
Q Consensus 359 n~v~a~~~~~~~~ 371 (371)
|.+++++.|+|.+
T Consensus 143 Qa~~~f~lwtG~~ 155 (170)
T d1nyta1 143 QAAHAFLLWHGVL 155 (170)
T ss_dssp HHHHHHHHHHSSC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999863
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=1.1e-15 Score=134.85 Aligned_cols=128 Identities=23% Similarity=0.308 Sum_probs=103.4
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCCH--------------------------
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKNP-------------------------- 275 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~l-------------------------- 275 (371)
.|+++.|++.+++++||+|+|+|+|++ ||+++..|...|+ ++++++|+..++
T Consensus 3 ~Gf~~~l~~~~~~l~~k~vlIlGaGGa-arai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (182)
T d1vi2a1 3 TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ 81 (182)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCcHH-HHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc
Confidence 789999999999999999999999997 9999999999997 799999875332
Q ss_pred ---HhhccCCcEEEEccCC---CC----c-ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccC
Q 017438 276 ---EEITRQADIIISAVGQ---PN----M-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPV 344 (371)
Q Consensus 276 ---~~~l~~ADIVIsAvG~---p~----~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPV 344 (371)
.+.+.++|+||++|+. +. + .+.+.++++.+|+|+.|+|.+| +|.. .++..|+ ++
T Consensus 82 ~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T-------~ll~------~a~~~g~--~~ 146 (182)
T d1vi2a1 82 QAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-------KLLQ------QAQQAGC--KT 146 (182)
T ss_dssp HHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSC-------HHHH------HHHTTTC--EE
T ss_pred cchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCcccc-------HHHH------HHHHCcC--eE
Confidence 2335789999999862 21 1 2445689999999999999877 4543 3566777 45
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 345 PGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 345 PGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
-+|.+ ||++|.+++++.|+|.+
T Consensus 147 i~Gl~-----Mli~Qa~~~f~iwtg~~ 168 (182)
T d1vi2a1 147 IDGYG-----MLLWQGAEQFTLWTGKD 168 (182)
T ss_dssp ECHHH-----HHHHHHHHHHHHHHSSC
T ss_pred eccHH-----HHHHHHHHHHHHHhCCC
Confidence 56666 99999999999999863
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.59 E-value=1.5e-15 Score=133.27 Aligned_cols=127 Identities=22% Similarity=0.280 Sum_probs=103.3
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------------CHHhh
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------NPEEI 278 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------~l~~~ 278 (371)
.|+++.|++++.+++||+|+|+|+|++ +|+++..|.+.| .|+|++|+.. ++...
T Consensus 3 ~G~~~~l~~~~~~~~~k~vlIlGaGG~-arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (177)
T d1nvta1 3 IGARMALEEEIGRVKDKNIVIYGAGGA-ARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVD 80 (177)
T ss_dssp HHHHHHHHHHHCCCCSCEEEEECCSHH-HHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCC
T ss_pred HHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhc
Confidence 789999999999999999999999997 999999998777 9999999732 23345
Q ss_pred ccCCcEEEEccCCC---C-----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccH
Q 017438 279 TRQADIIISAVGQP---N-----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGP 350 (371)
Q Consensus 279 l~~ADIVIsAvG~p---~-----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp 350 (371)
..++|++|++++.. . .++.++++++.+|+|+.|+|.+| .|+- .++.+|+ ++-+|.+
T Consensus 81 ~~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~T-------~l~~------~a~~~G~--~~i~Gl~- 144 (177)
T d1nvta1 81 LDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLET-------VLLK------EAKKVNA--KTINGLG- 144 (177)
T ss_dssp CTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSC-------HHHH------HHHTTTC--EEECTHH-
T ss_pred cchhhhhccCCcccccccccccchhhhhccCcccceeeecCCcHhH-------HHHH------HHHHCCC--cccCCHH-
Confidence 67899999998742 1 25667889999999999999887 3554 3556677 3455665
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 017438 351 MTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 351 ~T~amLl~n~v~a~~~~~~~~ 371 (371)
||++|.+.+++.|+|..
T Consensus 145 ----MLv~Qa~~qf~lwtg~~ 161 (177)
T d1nvta1 145 ----MLIYQGAVAFKIWTGVE 161 (177)
T ss_dssp ----HHHHHHHHHHHHHHSSC
T ss_pred ----HHHHHHHHHHHHHHCCC
Confidence 99999999999999863
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=99.57 E-value=8.3e-16 Score=134.29 Aligned_cols=126 Identities=15% Similarity=0.257 Sum_probs=100.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCC---HH----------hhccCCcEEEEc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---PE----------EITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~---l~----------~~l~~ADIVIsA 288 (371)
.|+.++|++++++ ++|+|+|+|+|++ +|+++..|.+.|+ +|+|++|+.+. +. ....++|+||++
T Consensus 3 ~G~~~~l~~~~~~-~~~~vlIlGaGGa-arai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliINa 80 (167)
T d1npya1 3 IAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNV 80 (167)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEEC
T ss_pred HHHHHHHHHcCCC-CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhheec
Confidence 6899999999998 8999999999997 9999999999996 79999987421 11 124678999998
Q ss_pred cCC---CCc------ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHH
Q 017438 289 VGQ---PNM------VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSN 359 (371)
Q Consensus 289 vG~---p~~------v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n 359 (371)
|+. |+. ++..+++++++|+|+.|+|.+| +|.. .++..|+ ++-+|.+ ||++|
T Consensus 81 TpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~T-------~ll~------~A~~~G~--~~i~Gl~-----Mli~Q 140 (167)
T d1npya1 81 TSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVET-------PFIR------YAQARGK--QTISGAA-----VIVLQ 140 (167)
T ss_dssp SSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSC-------HHHH------HHHHTTC--EEECHHH-----HHHHH
T ss_pred cccCCccccccccccccHhhcCCcceEEEEeeccCCC-------HHHH------HHHHCCC--eEEECHH-----HHHHH
Confidence 862 221 3445678899999999999887 4554 2556777 3556676 99999
Q ss_pred HHHHHHHHhcC
Q 017438 360 TLTSAKRVHNF 370 (371)
Q Consensus 360 ~v~a~~~~~~~ 370 (371)
.+++++.|+|.
T Consensus 141 a~~~f~lwtg~ 151 (167)
T d1npya1 141 AVEQFELYTHQ 151 (167)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhCC
Confidence 99999999985
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=99.51 E-value=3.3e-15 Score=131.14 Aligned_cols=129 Identities=16% Similarity=0.261 Sum_probs=100.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH-------------------hhccCCc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE-------------------EITRQAD 283 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~-------------------~~l~~AD 283 (371)
.|+++.|++++++++||+|+|+|+|++ +|+++..|.+.+.+|+|++|+.+..+ ..+.++|
T Consensus 3 ~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~d 81 (171)
T d1p77a1 3 IGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYD 81 (171)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCS
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccc
Confidence 789999999999999999999999997 99999999988889999999742211 1246899
Q ss_pred EEEEccCC--CC---cccCCCcCCCeEEEEeee-cCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHH
Q 017438 284 IIISAVGQ--PN---MVRGSWIKPGAVIIDVGI-NPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLL 357 (371)
Q Consensus 284 IVIsAvG~--p~---~v~~d~ik~gavVIDvgi-n~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl 357 (371)
+||++|+. ++ ....+.++++.+++|+.| +|.+| .|.. .++..|+-+ +.+|.+ ||+
T Consensus 82 iiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T-------~~l~------~A~~~g~~~-v~~Gl~-----Ml~ 142 (171)
T d1p77a1 82 LVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDT-------PFIA------LCKSLGLTN-VSDGFG-----MLV 142 (171)
T ss_dssp EEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCC-------HHHH------HHHHTTCCC-EECSHH-----HHH
T ss_pred eeeecccccccccccchhhhhhcccceeeeeeccCcccH-------HHHH------HHHHcCCCc-ccCcHH-----HHH
Confidence 99999873 11 123345678999999999 67776 3443 355666533 656777 999
Q ss_pred HHHHHHHHHHhcCC
Q 017438 358 SNTLTSAKRVHNFQ 371 (371)
Q Consensus 358 ~n~v~a~~~~~~~~ 371 (371)
+|.+.+++.|+|.+
T Consensus 143 ~Qa~~~f~iwtg~~ 156 (171)
T d1p77a1 143 AQAAHSFHLWRGVM 156 (171)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999863
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=99.21 E-value=8.4e-12 Score=108.20 Aligned_cols=95 Identities=18% Similarity=0.252 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-----------------CCHHhhccCC
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----------------KNPEEITRQA 282 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-----------------~~l~~~l~~A 282 (371)
.+.+.+++.++...++++|+|+|||+|++ |+.++..|...|+ .+++++|+. .++.+.+.++
T Consensus 7 v~~aAv~la~~~~~~l~~~~ilviGaG~~-g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~ 85 (159)
T d1gpja2 7 IGSAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS 85 (159)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCcccCeEEEECCCHH-HHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccC
Confidence 45778888888877999999999999886 9999999999998 699999872 3667889999
Q ss_pred cEEEEccCCCCc-ccCCCcC---------CCeEEEEeeecCCCC
Q 017438 283 DIIISAVGQPNM-VRGSWIK---------PGAVIIDVGINPVED 316 (371)
Q Consensus 283 DIVIsAvG~p~~-v~~d~ik---------~gavVIDvgin~~~~ 316 (371)
||||++|+.|+. ++.++++ ...++||+++++.-+
T Consensus 86 Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd 129 (159)
T d1gpja2 86 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVE 129 (159)
T ss_dssp SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBC
T ss_pred CEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCcC
Confidence 999999999885 7888874 346999999887544
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=99.02 E-value=2.1e-10 Score=100.17 Aligned_cols=87 Identities=26% Similarity=0.355 Sum_probs=75.9
Q ss_pred HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEccCCCCc
Q 017438 228 LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 228 lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
+++..+.-+.||+++|+|.|. |||.+|+.|...||.|+|+... ...+++.++.+||+|++||.++.
T Consensus 13 i~r~t~~~laGk~vvV~GYG~-vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aDi~vTaTGn~~v 91 (163)
T d1v8ba1 13 LMRATDFLISGKIVVICGYGD-VGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDV 91 (163)
T ss_dssp HHHHHCCCCTTSEEEEECCSH-HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSS
T ss_pred HHHHhCceecCCEEEEecccc-cchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCcEEEEcCCCCcc
Confidence 445668999999999999999 5999999999999999999765 35788999999999999999999
Q ss_pred ccCCC---cCCCeEEEEeeecCCC
Q 017438 295 VRGSW---IKPGAVIIDVGINPVE 315 (371)
Q Consensus 295 v~~d~---ik~gavVIDvgin~~~ 315 (371)
|+.++ +|+|++|..+|.-..|
T Consensus 92 I~~~h~~~MKdgaIl~N~GHfd~E 115 (163)
T d1v8ba1 92 IKLEHLLKMKNNAVVGNIGHFDDE 115 (163)
T ss_dssp BCHHHHTTCCTTCEEEECSSTTTS
T ss_pred ccHHHHHHhhCCeEEEeccccchh
Confidence 88765 5899999999976443
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=3.4e-10 Score=98.94 Aligned_cols=90 Identities=24% Similarity=0.338 Sum_probs=77.3
Q ss_pred HHHH-HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEc
Q 017438 223 KGCI-ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi-~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsA 288 (371)
+.++ -+++..+..|.||+|+|+|.|. |||.+|..|...||.|+++... ...+++.++.||++|++
T Consensus 8 ~S~~~~~~r~t~~~l~Gk~v~V~GyG~-iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~adivvta 86 (163)
T d1li4a1 8 ESLIDGIKRATDVMIAGKVAVVAGYGD-VGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTT 86 (163)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC
T ss_pred hhHHHHHHHHhCceecCCEEEEecccc-ccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhccEEEec
Confidence 4444 3445579999999999999998 5999999999999999999765 35788999999999999
Q ss_pred cCCCCcccCCC---cCCCeEEEEeeecC
Q 017438 289 VGQPNMVRGSW---IKPGAVIIDVGINP 313 (371)
Q Consensus 289 vG~p~~v~~d~---ik~gavVIDvgin~ 313 (371)
||.++.|+.++ +|+|+++..+|...
T Consensus 87 TGn~~vI~~eh~~~MKdgaIL~N~Ghfd 114 (163)
T d1li4a1 87 TGCIDIILGRHFEQMKDDAIVCNIGHFD 114 (163)
T ss_dssp SSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred CCCccchhHHHHHhccCCeEEEEecccc
Confidence 99999998765 58999999999654
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.66 E-value=7.2e-09 Score=90.74 Aligned_cols=77 Identities=30% Similarity=0.460 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHhhccCCcEEEEccC----
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVG---- 290 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG---- 290 (371)
+...+|+|||+|.+ |...+..+.+.||.|++++.+. .++++.+++||+||+++=
T Consensus 30 v~pa~V~ViGaGva-G~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~ 108 (168)
T d1pjca1 30 VKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 108 (168)
T ss_dssp BCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCcEEEEECCChH-HHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence 46789999999875 9999999999999999998651 357789999999998884
Q ss_pred -CCCcccCCCc---CCCeEEEEeeecC
Q 017438 291 -QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 291 -~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
.|++|+.||+ |||+++||+.++.
T Consensus 109 ~aP~lIt~~mv~~Mk~GSVIVDvaidq 135 (168)
T d1pjca1 109 RAPILVPASLVEQMRTGSVIVDVAVDQ 135 (168)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred ccCeeecHHHHhhcCCCcEEEEeecCC
Confidence 4678999886 8899999999875
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.57 E-value=7.7e-08 Score=84.06 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=67.7
Q ss_pred CCHHHHHHHH-HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------
Q 017438 220 CTPKGCIELL-HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------- 272 (371)
Q Consensus 220 cTa~gvi~lL-~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------------- 272 (371)
.|+.|.+..+ ++.+.+|+||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~~~v~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 83 (191)
T d1luaa1 4 TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD 83 (191)
T ss_dssp HHHHHHHHHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH
T ss_pred ccHHHHHHHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH
Confidence 3456655555 6669999999999999888889999999999999999998762
Q ss_pred CCHHhhccCCcEEEEccCCC-CcccCCCcCC---CeEEEEe
Q 017438 273 KNPEEITRQADIIISAVGQP-NMVRGSWIKP---GAVIIDV 309 (371)
Q Consensus 273 ~~l~~~l~~ADIVIsAvG~p-~~v~~d~ik~---gavVIDv 309 (371)
.++++.+.++||||+++|.+ ..++.|.++. -.++.|+
T Consensus 84 ~~~~~~~~~iDilin~Ag~g~~~~~~e~~~~~~~~nv~~~~ 124 (191)
T d1luaa1 84 ASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADY 124 (191)
T ss_dssp HHHHHHTTTCSEEEECCCTTCCCBCHHHHHTCTTCCEEEEC
T ss_pred HHHHHHhcCcCeeeecCccccccCCHHHHHhhhcceeehhH
Confidence 24557789999999998853 3455554432 2345554
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.48 E-value=8e-08 Score=85.02 Aligned_cols=77 Identities=26% Similarity=0.385 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------------------------------------
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------------------------------------ 273 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------------------------------------ 273 (371)
+...+|+|||+|. +|...+....+.||.|++.+.+..
T Consensus 27 V~pa~VvViGaGv-aG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~ 105 (183)
T d1l7da1 27 VPPARVLVFGVGV-AGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 105 (183)
T ss_dssp ECCCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred cCCcEEEEEcCcH-HHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence 3456999999977 599999999999999999975421
Q ss_pred -CHHhhccCCcEEEEccC-----CCCcccCCCc---CCCeEEEEeeecC
Q 017438 274 -NPEEITRQADIIISAVG-----QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 274 -~l~~~l~~ADIVIsAvG-----~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
.+.+.+++||+||+++= .|.+|+.+|+ |||+++||+.+..
T Consensus 106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidq 154 (183)
T d1l7da1 106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA 154 (183)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecC
Confidence 13345889999998883 4668999886 8899999999874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=98.28 E-value=5.7e-07 Score=78.76 Aligned_cols=75 Identities=25% Similarity=0.352 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------CCHHhhccCCcEEEEccCC----CCcccCC---C
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------KNPEEITRQADIIISAVGQ----PNMVRGS---W 299 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------~~l~~~l~~ADIVIsAvG~----p~~v~~d---~ 299 (371)
.++||++.|||.|.+ |+.++.+|...|+.|+.+.+.. .++++.++++|||+.+++. -++|+.+ .
T Consensus 39 ~l~gk~vgIiG~G~I-G~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~ 117 (181)
T d1qp8a1 39 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL 117 (181)
T ss_dssp CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred cccCceEEEeccccc-cccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccccccccccccceeee
Confidence 489999999999996 9999999999999999997653 4688999999999998873 2467664 4
Q ss_pred cCCCeEEEEee
Q 017438 300 IKPGAVIIDVG 310 (371)
Q Consensus 300 ik~gavVIDvg 310 (371)
+|+|+++|++|
T Consensus 118 mk~~ailIN~~ 128 (181)
T d1qp8a1 118 MAEDAVFVNVG 128 (181)
T ss_dssp SCTTCEEEECS
T ss_pred ccccceEEecc
Confidence 69999999998
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=98.13 E-value=9.1e-07 Score=78.56 Aligned_cols=78 Identities=22% Similarity=0.313 Sum_probs=66.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccCC----CCcccC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQ----PNMVRG 297 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG~----p~~v~~ 297 (371)
+.+|.||+|.|||.|.+ |+.+|.+|...|++|..++... .++.+.++++|+|+..++- -++|..
T Consensus 38 g~el~gk~vgIiG~G~I-G~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~ 116 (197)
T d1j4aa1 38 GREVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIND 116 (197)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSH
T ss_pred CccccCCeEEEeccccc-chhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCCccccccccccH
Confidence 46789999999999996 9999999999999999987542 4788999999999998872 346776
Q ss_pred CC---cCCCeEEEEeee
Q 017438 298 SW---IKPGAVIIDVGI 311 (371)
Q Consensus 298 d~---ik~gavVIDvgi 311 (371)
+. +|+|+++|+++-
T Consensus 117 ~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 117 ESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp HHHHHSCTTEEEEECSC
T ss_pred HHHhhhCCccEEEecCc
Confidence 64 589999999984
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=98.13 E-value=1.6e-06 Score=76.65 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=67.2
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCC----CC
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ----PN 293 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~----p~ 293 (371)
..+.+|.||++.|||.|.+ |+.+|.+|...|++|..+.+.. .++++.+++||+|+..++- -+
T Consensus 42 ~~~~eL~gktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~ 120 (193)
T d1mx3a1 42 SGAARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHH 120 (193)
T ss_dssp TTCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTT
T ss_pred cCceeeeCceEEEeccccc-cccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccccchh
Confidence 3467899999999999996 9999999999999999987642 3688999999999988872 23
Q ss_pred cccCC---CcCCCeEEEEeee
Q 017438 294 MVRGS---WIKPGAVIIDVGI 311 (371)
Q Consensus 294 ~v~~d---~ik~gavVIDvgi 311 (371)
+|..+ .+|+|+++|+++-
T Consensus 121 li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 121 LINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp SBSHHHHTTSCTTEEEEECSC
T ss_pred hhhHHHHhccCCCCeEEecCC
Confidence 67654 5799999999984
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.04 E-value=3e-06 Score=74.02 Aligned_cols=79 Identities=23% Similarity=0.309 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccC-C---CCccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVG-Q---PNMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG-~---p~~v~ 296 (371)
+.++.||++.|+|.|.+ |+.++..|...|++|..+.++. .++++.+++||||+..++ . .++|+
T Consensus 39 ~~~l~~k~vgiiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin 117 (184)
T d1ygya1 39 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID 117 (184)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred cccccceeeeeccccch-hHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhh
Confidence 56789999999999996 9999999999999999887653 367889999999998887 2 34677
Q ss_pred CC---CcCCCeEEEEeeec
Q 017438 297 GS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin 312 (371)
.+ .+|+|+++|++|--
T Consensus 118 ~~~l~~mk~~a~lIN~sRG 136 (184)
T d1ygya1 118 KEALAKTKPGVIIVNAARG 136 (184)
T ss_dssp HHHHTTSCTTEEEEECSCT
T ss_pred HHHHhhhCCCceEEEecch
Confidence 65 46899999999843
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=3.2e-06 Score=73.92 Aligned_cols=80 Identities=23% Similarity=0.431 Sum_probs=67.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC-C---CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ-P---NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~-p---~~v~~d 298 (371)
+.++.||++.|||.|.+ |+.++.+|...|++|+...++. .++++.+++||||+...+- + ++|+.+
T Consensus 39 ~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~sDii~i~~plt~~T~~li~~~ 117 (188)
T d1sc6a1 39 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK 117 (188)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred cccccceEEEEeecccc-hhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhccceeecccCCcchhhhccHH
Confidence 45799999999999996 9999999999999999997642 3689999999999988873 3 468776
Q ss_pred C---cCCCeEEEEeeecC
Q 017438 299 W---IKPGAVIIDVGINP 313 (371)
Q Consensus 299 ~---ik~gavVIDvgin~ 313 (371)
. +|+|+++|.++-..
T Consensus 118 ~l~~mk~~a~lIN~aRG~ 135 (188)
T d1sc6a1 118 EISLMKPGSLLINASRGT 135 (188)
T ss_dssp HHHHSCTTEEEEECSCSS
T ss_pred HHhhCCCCCEEEEcCcHH
Confidence 5 58999999998543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=98.00 E-value=5.5e-06 Score=72.33 Aligned_cols=80 Identities=16% Similarity=0.291 Sum_probs=66.7
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCcEEEEccCC-C---C
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQ-P---N 293 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~ADIVIsAvG~-p---~ 293 (371)
...+++|+++.|||.|.+ |+.++.+|...|+.|..+.+. ..++.+.++++|+|+..++- + +
T Consensus 38 ~~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~ 116 (188)
T d2naca1 38 HAYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEH 116 (188)
T ss_dssp TCCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTT
T ss_pred cceeccccceeecccccc-chhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchh
Confidence 467899999999999996 999999999999999988754 24688999999999988873 2 4
Q ss_pred cccCC---CcCCCeEEEEeeec
Q 017438 294 MVRGS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d---~ik~gavVIDvgin 312 (371)
+|..+ .+|+|+++|.++--
T Consensus 117 li~~~~l~~mk~ga~lIN~aRG 138 (188)
T d2naca1 117 MINDETLKLFKRGAYIVNTARG 138 (188)
T ss_dssp CBSHHHHTTSCTTEEEEECSCG
T ss_pred hhHHHHHHhCCCCCEEEecCch
Confidence 67664 56999999999843
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=97.99 E-value=2.9e-06 Score=75.12 Aligned_cols=79 Identities=24% Similarity=0.347 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC----CCcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ----PNMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~----p~~v~~d 298 (371)
+.+|.||++.|||.|.+ |+.++.+|...|++|..+++.. .++.+.++++|+|+..++. -++|+.+
T Consensus 40 ~~~l~~ktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~~~ 118 (199)
T d1dxya1 40 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEA 118 (199)
T ss_dssp CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHH
T ss_pred cccccceeeeeeecccc-cccccccccccceeeeccCCccchhhhcchhHHHHHHHHHhcccceeeecccccccccccHH
Confidence 56899999999999996 9999999999999999997652 3678899999999988873 2367776
Q ss_pred C---cCCCeEEEEeeec
Q 017438 299 W---IKPGAVIIDVGIN 312 (371)
Q Consensus 299 ~---ik~gavVIDvgin 312 (371)
. +|+|+++|.++--
T Consensus 119 ~l~~mk~~a~lIN~aRG 135 (199)
T d1dxya1 119 AFNLMKPGAIVINTARP 135 (199)
T ss_dssp HHHHSCTTEEEEECSCT
T ss_pred HhhccCCceEEEecccH
Confidence 4 5899999999843
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=97.85 E-value=9.7e-06 Score=71.27 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=66.3
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC-C---C
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ-P---N 293 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~-p---~ 293 (371)
.+.+++||++.|||.|.+ |+.++.+|...|+.|..+.+.. .++.+.+++||+|+..++- + +
T Consensus 41 ~~~~l~g~tvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~ 119 (191)
T d1gdha1 41 VGEKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRY 119 (191)
T ss_dssp CBCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred ccceecccceEEeecccc-hHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhh
Confidence 356789999999999996 9999999999999999886542 3688999999999988872 3 4
Q ss_pred cccCC---CcCCCeEEEEeeec
Q 017438 294 MVRGS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d---~ik~gavVIDvgin 312 (371)
+|+.+ .+|+|+++|+++--
T Consensus 120 li~~~~l~~mk~~a~lIN~sRG 141 (191)
T d1gdha1 120 FFNKATIKSLPQGAIVVNTARG 141 (191)
T ss_dssp CBSHHHHTTSCTTEEEEECSCG
T ss_pred eecHHHhhCcCCccEEEecCCc
Confidence 67664 56999999999843
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.80 E-value=3.4e-06 Score=70.11 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------CHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+|+|+|||+|.+ |+++|..|.++|.+|+|++|+.. .+.+.+..+|++|++++...
T Consensus 1 ~~K~IliiGaG~~-G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~ 79 (182)
T d1e5qa1 1 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF 79 (182)
T ss_dssp CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGG
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchh
Confidence 4799999999885 99999999999999999998721 23456788899998876422
Q ss_pred c--ccCCCcCCCeEEEEeeecC
Q 017438 294 M--VRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~ 313 (371)
. +.....+.+..++|+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
T d1e5qa1 80 HATVIKSAIRQKKHVVTTSYVS 101 (182)
T ss_dssp HHHHHHHHHHHTCEEECSSCCC
T ss_pred hhHHHHHHHhhccceeecccCc
Confidence 1 2334456678888887653
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=9.3e-06 Score=62.84 Aligned_cols=37 Identities=24% Similarity=0.428 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+|+|+|.|.+ |+.+|.+|.++|+.|+++..+.
T Consensus 2 ~~~~K~v~ViGlG~s-G~s~a~~L~~~g~~v~~~D~~~ 38 (93)
T d2jfga1 2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRM 38 (93)
T ss_dssp CCTTCCEEEECCSHH-HHHHHHHHHHTTCCCEEEESSS
T ss_pred CcCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEeeCCc
Confidence 689999999999998 9999999999999999998754
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.74 E-value=1.6e-05 Score=66.80 Aligned_cols=71 Identities=25% Similarity=0.246 Sum_probs=57.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-----------------------------CCCHHhhccCCcEEEEc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-----------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-----------------------------t~~l~~~l~~ADIVIsA 288 (371)
.|+++|||+|.+ |.++|..|.+.|..|++..+. +.++++.++++|+||.+
T Consensus 1 sk~iaIiGaG~~-G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 489999999885 999999999999999999764 24678889999999999
Q ss_pred cCCCCc---cc--CCCcCCCeEEEEe
Q 017438 289 VGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 289 vG~p~~---v~--~d~ik~gavVIDv 309 (371)
+..... ++ ..+++++++|+..
T Consensus 80 v~~~~~~~~~~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 80 VPAIHHASIAANIASYISEGQLIILN 105 (184)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred EchhHHHHHHHHhhhccCCCCEEEEe
Confidence 986542 11 3468888888754
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.74 E-value=1.5e-05 Score=67.12 Aligned_cols=73 Identities=22% Similarity=0.345 Sum_probs=59.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-cCC--
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-RGS-- 298 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~~d-- 298 (371)
+|-|||.|.+ |.++|..|++.|.+|++++++. .+.++.++++|+||++++.+.- + ..+
T Consensus 2 kIgiIGlG~M-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~ 80 (161)
T d1vpda2 2 KVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 80 (161)
T ss_dssp EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred EEEEEehhHH-HHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence 6899999986 9999999999999999998863 4567889999999999986542 2 222
Q ss_pred --CcCCCeEEEEeeecC
Q 017438 299 --WIKPGAVIIDVGINP 313 (371)
Q Consensus 299 --~ik~gavVIDvgin~ 313 (371)
..++|.++||++...
T Consensus 81 ~~~~~~g~iiid~sT~~ 97 (161)
T d1vpda2 81 IEGAKPGTVLIDMSSIA 97 (161)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhccCCCCEEEECCCCC
Confidence 357899999998653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.65 E-value=3e-05 Score=64.30 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=61.5
Q ss_pred CCCCCEEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC-CHHhhccCCcEEEEccCCCCc---c--cCCCcCCCeEEE
Q 017438 235 DIKGKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK-NPEEITRQADIIISAVGQPNM---V--RGSWIKPGAVII 307 (371)
Q Consensus 235 ~l~GK~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l~~~l~~ADIVIsAvG~p~~---v--~~d~ik~gavVI 307 (371)
+..-|+|.||| .|.+ |.++|..|.+.|.+|+++++... ..++...++|+++.++..... + -.+.++++++++
T Consensus 6 ~~~~~kI~iIGg~G~m-G~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iii 84 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLA 84 (152)
T ss_dssp CTTCCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred CCCCCeEEEEcCCCHH-HHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEE
Confidence 44568999999 7775 99999999999999999998764 455678999999999985432 1 124568899999
Q ss_pred Eeeec
Q 017438 308 DVGIN 312 (371)
Q Consensus 308 Dvgin 312 (371)
|++..
T Consensus 85 D~~Sv 89 (152)
T d2pv7a2 85 DLTSV 89 (152)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 99853
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.56 E-value=5.9e-05 Score=63.56 Aligned_cols=73 Identities=19% Similarity=0.373 Sum_probs=60.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCcEEEEccCCCCc----c-cCC-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQPNM----V-RGS- 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~ADIVIsAvG~p~~----v-~~d- 298 (371)
++|-+||.|.+ |.++|..|+++|.+|++++++ ..++.+.++++|+|++.+..+.. + ..+
T Consensus 2 ~kIg~IGlG~M-G~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~ 80 (162)
T d3cuma2 2 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 80 (162)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred CEEEEEEEHHH-HHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence 58999999996 999999999999999999886 24678999999999999986541 1 112
Q ss_pred ---CcCCCeEEEEeeec
Q 017438 299 ---WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 ---~ik~gavVIDvgin 312 (371)
.+++|.++||++..
T Consensus 81 ~~~~l~~g~iiid~st~ 97 (162)
T d3cuma2 81 LLAHIAPGTLVLECSTI 97 (162)
T ss_dssp HHHHSCTTCEEEECSCC
T ss_pred ccccCCCCCEEEECCCC
Confidence 36889999999854
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.44 E-value=3.3e-05 Score=64.74 Aligned_cols=71 Identities=21% Similarity=0.204 Sum_probs=55.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------CHHhhccCCcEEEEccCCCC---ccc--CCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------NPEEITRQADIIISAVGQPN---MVR--GSW 299 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~l~~~l~~ADIVIsAvG~p~---~v~--~d~ 299 (371)
||.|||.|.+ |..+|..|.+.|.+|+.++++.. +..+.+++||+||.+++... .+. .+.
T Consensus 2 kI~iIG~G~m-G~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl~~l~~~ 80 (165)
T d2f1ka2 2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLEKLIPH 80 (165)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHHHHGGG
T ss_pred EEEEEeecHH-HHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhhhhhhhh
Confidence 6899999885 99999999999999999987521 23367899999999986321 221 256
Q ss_pred cCCCeEEEEeee
Q 017438 300 IKPGAVIIDVGI 311 (371)
Q Consensus 300 ik~gavVIDvgi 311 (371)
++++++|+|++.
T Consensus 81 l~~~~iv~~~~s 92 (165)
T d2f1ka2 81 LSPTAIVTDVAS 92 (165)
T ss_dssp SCTTCEEEECCS
T ss_pred cccccceeeccc
Confidence 889999999973
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.39 E-value=0.00011 Score=61.55 Aligned_cols=70 Identities=16% Similarity=0.220 Sum_probs=56.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------CCCHHhhccCCcEEEEccCCCCccc--CCCcCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------TKNPEEITRQADIIISAVGQPNMVR--GSWIKP 302 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------t~~l~~~l~~ADIVIsAvG~p~~v~--~d~ik~ 302 (371)
|+.+||.|.+ |.+++..|.+.|.+|++++++ +.+.++.++++|+||.++. |..+. -+.+++
T Consensus 2 kIg~IG~G~m-G~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavk-p~~~~~vl~~l~~ 79 (152)
T d2ahra2 2 KIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPLHF 79 (152)
T ss_dssp EEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTSCC
T ss_pred EEEEEeccHH-HHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecc-hHhHHHHhhhccc
Confidence 6899999996 999999999999999999876 2467788999999999984 54321 134678
Q ss_pred CeEEEEeee
Q 017438 303 GAVIIDVGI 311 (371)
Q Consensus 303 gavVIDvgi 311 (371)
+.++|++..
T Consensus 80 ~~~iis~~a 88 (152)
T d2ahra2 80 KQPIISMAA 88 (152)
T ss_dssp CSCEEECCT
T ss_pred ceeEecccc
Confidence 888998863
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.37 E-value=0.00013 Score=57.81 Aligned_cols=59 Identities=14% Similarity=0.228 Sum_probs=45.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCH-----------------HhhccCCcEEEEccCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPN 293 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l-----------------~~~l~~ADIVIsAvG~p~ 293 (371)
++++||+|+|||.|.+ |...+..|++.||.|++..... +++ .+.+..+|+|+.+++.+.
T Consensus 8 l~l~~k~vlVvG~G~v-a~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~ 84 (113)
T d1pjqa1 8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT 84 (113)
T ss_dssp ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred EEeCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHH
Confidence 5899999999999995 9999999999999999986442 111 234566777777776543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.29 E-value=0.00022 Score=63.05 Aligned_cols=78 Identities=19% Similarity=0.303 Sum_probs=57.2
Q ss_pred CCHHHHHHHHH----HhCC-CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhc-c
Q 017438 220 CTPKGCIELLH----RYGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEIT-R 280 (371)
Q Consensus 220 cTa~gvi~lL~----~~~i-~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l-~ 280 (371)
+|+.|+...++ +.+. +|+||+|+|-|.|+ ||..+|..|.+.|++|+++..... ..++.+ .
T Consensus 4 ~Ta~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~-VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~ 82 (201)
T d1c1da1 4 TTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGA-VGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLST 82 (201)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGC
T ss_pred chHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCccccccc
Confidence 57777776665 4576 79999999999999 599999999999999999976531 233443 4
Q ss_pred CCcEEEEccCCCCcccCCC
Q 017438 281 QADIIISAVGQPNMVRGSW 299 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~d~ 299 (371)
++||++-+. ..+.|+.+.
T Consensus 83 ~~DI~iPcA-~~~~I~~~~ 100 (201)
T d1c1da1 83 PCDVFAPCA-MGGVITTEV 100 (201)
T ss_dssp CCSEEEECS-CSCCBCHHH
T ss_pred cceeeeccc-ccccccHHH
Confidence 789988443 234555543
|
| >d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Shikimate dehydrogenase-like domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=3.4e-05 Score=61.34 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCc
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDG 199 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDg 199 (371)
.-+.++++.|+++.|..++ +++++|.+.++.+.+ .++.|++|++|+++ ..-++++.+++ .+.+.+
T Consensus 21 ihn~~f~~~gi~~~Y~~~~--v~~~~l~~~~~~l~~-~~~~G~nVT~P~K~--~~~~~~d~~~~~a~~igA 86 (102)
T d1vi2a2 21 MQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKA-LKMRGTGVSMPNKQ--LACEYVDELTPAAKLVGA 86 (102)
T ss_dssp HHHHHHHHTTCSEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTSTT--GGGGGCSEECHHHHHHTC
T ss_pred HHHHHHHHcCCCcEEeeEe--eCchHHHHHHHHhhh-hccchhhhhhHHHH--HHHHhcccCCHHHHhhCc
Confidence 3467899999999999985 667788888988876 47999999999997 33445555555 444433
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.22 E-value=0.00012 Score=62.17 Aligned_cols=95 Identities=21% Similarity=0.367 Sum_probs=71.0
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHH
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPE 276 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~ 276 (371)
.++|.+.-++..+++..---.|.+|+|+|+|. +|..+++++...|+ +|+++.+.. .+..
T Consensus 8 ~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~-iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~ 86 (182)
T d1vj0a2 8 MAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE 86 (182)
T ss_dssp HHTTHHHHHHHHHHTCSSCCBTCEEEEECCSH-HHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHH
T ss_pred HhhcHHHHHHHHHHHHhCCCCCCEEEEECCCc-cchhheecccccccccccccccccccccccccccceEEEeccccchH
Confidence 35788877888888776545799999999976 59999999999998 788886531 2322
Q ss_pred hh-------c--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EI-------T--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~-------l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+. . +.+|+||.++|.+..+. -+.+++|..++=+|+.
T Consensus 87 ~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~ 133 (182)
T d1vj0a2 87 ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA 133 (182)
T ss_dssp HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeec
Confidence 21 1 23899999999987543 3567888888888854
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.99 E-value=0.00031 Score=59.85 Aligned_cols=96 Identities=23% Similarity=0.272 Sum_probs=69.9
Q ss_pred ccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCH
Q 017438 216 LFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNP 275 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l 275 (371)
.++||.-.-.+..++..++. .|.+|+|+|+|+ +|...++++...|+ .|+++.+.. .+.
T Consensus 7 ~~l~~~~~ta~~a~~~a~~~-~g~~VlI~GaG~-vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~ 84 (174)
T d1jqba2 7 VMITDMMTTGFHGAELADIE-MGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHI 84 (174)
T ss_dssp HTTTTHHHHHHHHHHHTTCC-TTCCEEEECCSH-HHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCH
T ss_pred HHhhhHHHHHHHHHHHhCCC-CCCEEEEEcCCc-chhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhH
Confidence 35677655556667776654 699999999987 49999999999998 688775541 222
Q ss_pred Hh----hc--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 276 EE----IT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 276 ~~----~l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
.+ .+ +-+|+||-++|.+..+. -+.++|+..++-+|...
T Consensus 85 ~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~ 130 (174)
T d1jqba2 85 EDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHG 130 (174)
T ss_dssp HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred HHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecC
Confidence 22 22 23899999999987654 35689998888899654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.97 E-value=0.00027 Score=58.47 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+.++||+|+|||.|. +|.--+..|++.||.||++..
T Consensus 9 ~~l~gkrvLViGgG~-va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEEE
T ss_pred eeeCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeC
Confidence 468999999999998 599999999999999999953
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.0005 Score=58.92 Aligned_cols=56 Identities=13% Similarity=0.245 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
..|||+|+|+++-+|+.++..|+++|.+|++..|+. .++.+.++.+|+||.++|..
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence 468999999998899999999999999999997652 13456788999999988853
|
| >d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Shikimate dehydrogenase-like domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.95 E-value=0.00013 Score=57.59 Aligned_cols=66 Identities=9% Similarity=0.062 Sum_probs=50.7
Q ss_pred HHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccC
Q 017438 131 KKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFH 201 (371)
Q Consensus 131 k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~ 201 (371)
-+.++++.|++..|..++ ++.+++.+.++.+.+ .++.|++|++|+++ +.-++++.+++ .+.+.+++
T Consensus 20 hn~~~~~~gi~~~y~~~~--v~~~~~~~~~~~l~~-~~~~G~nVT~P~K~--~~~~~~d~~~~~a~~igAvN 86 (101)
T d1p77a2 20 QNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFFE-EGAKGCNITSPFKE--RAYQLADEYSQRAKLAEACN 86 (101)
T ss_dssp HHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTCHH--HHHHHCSEECHHHHHHTCCS
T ss_pred HHHHHHHcCCCccccccc--CCHHHHHHHHHHHHh-ccccceeeccHHHH--HHHHHhccCCHHHHHcCeeE
Confidence 457899999999999885 667789999998876 57999999999986 34455566666 55555553
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.90 E-value=0.00032 Score=60.94 Aligned_cols=55 Identities=25% Similarity=0.358 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsA 288 (371)
.=++|+|||+|.. |.++|..|.+.|.+|++..++ +.++++.+++||+||.|
T Consensus 6 ~m~KI~ViGaG~w-GtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiia 84 (189)
T d1n1ea2 6 YLNKAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFV 84 (189)
T ss_dssp CEEEEEEECCSHH-HHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEEC
T ss_pred eeceEEEECCCHH-HHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEc
Confidence 3368999999885 999999999999999997643 24678889999999999
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
++..
T Consensus 85 vPs~ 88 (189)
T d1n1ea2 85 IPTQ 88 (189)
T ss_dssp SCHH
T ss_pred CcHH
Confidence 9854
|
| >d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Shikimate dehydrogenase-like domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.90 E-value=8.3e-05 Score=59.76 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=48.8
Q ss_pred HHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCcc
Q 017438 132 KKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGF 200 (371)
Q Consensus 132 ~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl 200 (371)
++.+++.|+++.|+.++ ++++++.+.++.+.+ .++.|++|++|+++ +.-.+++.+++ .+.+.++
T Consensus 31 n~~~~~~gi~~~y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~~~~~~d~~s~~a~~igav 95 (110)
T d1nvta2 31 NAAFKDKGLNYVYVAFD--VLPENLKYVIDGAKA-LGIVGFNVTIPHKI--EIMKYLDEIDKDAQLIGAV 95 (110)
T ss_dssp HHHHHHTTCCEEEEEEE--CCGGGGGGHHHHHHH-HTCCEEEECTTSTT--GGGGGCSEECHHHHHHTCC
T ss_pred HHHHHHcCCcEEEeecc--cCHHHHHHHHHhhcc-cCcchhheehHHHH--HHHHHhccCCHHHHHhCcE
Confidence 67899999999999985 666777777777765 47999999999997 33556666666 4555444
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.88 E-value=0.00055 Score=57.63 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC--------------------------CCCHHhhccCCcEEEEcc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~--------------------------t~~l~~~l~~ADIVIsAv 289 (371)
+-+||+|||+|. ||.++|.+|...+ +++.+++.+ +.+.++.+++|||||.++
T Consensus 6 k~~KI~IIGaG~-VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita 84 (154)
T d1pzga1 6 RRKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 84 (154)
T ss_dssp CCCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCCcEEEECCCH-HHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence 568999999976 6999999888777 588877643 235567889999999999
Q ss_pred CCCC
Q 017438 290 GQPN 293 (371)
Q Consensus 290 G~p~ 293 (371)
|.|.
T Consensus 85 g~~~ 88 (154)
T d1pzga1 85 GLTK 88 (154)
T ss_dssp SCSS
T ss_pred cccc
Confidence 8653
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.87 E-value=0.00053 Score=61.27 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+|+||+++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~ 39 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 39 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 368999999999988889999999999999999998763
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.83 E-value=0.0003 Score=59.74 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=57.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------------CHHhhccCCcEEEEccCCCCcc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------NPEEITRQADIIISAVGQPNMV 295 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------~l~~~l~~ADIVIsAvG~p~~v 295 (371)
-++|-+||.|.+ |.++|..|+++|.+|++++++.. ++.+.+.++|++|..+....-+
T Consensus 2 ~~nIg~IGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v 80 (176)
T d2pgda2 2 QADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV 80 (176)
T ss_dssp CBSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred CCcEEEEeEhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence 368999999986 99999999999999999998632 2335677889999887765421
Q ss_pred ---c---CCCcCCCeEEEEeeecC
Q 017438 296 ---R---GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 296 ---~---~d~ik~gavVIDvgin~ 313 (371)
. .+.+++|.++||.+...
T Consensus 81 ~~v~~~l~~~~~~g~iiid~sT~~ 104 (176)
T d2pgda2 81 DNFIEKLVPLLDIGDIIIDGGNSE 104 (176)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHHHhccccCcEEEecCcch
Confidence 1 13468899999998643
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.82 E-value=0.00061 Score=60.35 Aligned_cols=57 Identities=28% Similarity=0.423 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------C---HHhhccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------N---PEEITRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~---l~~~l~~ADIVIsAvG~p 292 (371)
|+||+++|.|++.-+|+.+|..|+++|++|.++.++.+ + +.+...+-|++|+.+|.+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~ 77 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP 77 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence 79999999999888899999999999999999987621 1 224456678888777743
|
| >d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Shikimate dehydrogenase-like domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.00018 Score=56.88 Aligned_cols=67 Identities=9% Similarity=0.117 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccC
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFH 201 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~ 201 (371)
.=+.++++.|++..|..+. ++++++.+.++.+.+ .++.|++|++|+++ ..-++++.+++ .+.+.+++
T Consensus 19 ihn~~~~~~gi~~~y~~~~--v~~~~~~~~~~~l~~-~~~~G~nVT~P~K~--~~~~~~d~~~~~a~~igAvN 86 (101)
T d1nyta2 19 IHQQFAQQLNIEHPYGRVL--APINDFINTLNAFFS-AGGKGANVTVPFKE--EAFARADELTERAALAGAVN 86 (101)
T ss_dssp HHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHHH-TTCCEEEECTTCHH--HHHHHCSEECHHHHHHTCCS
T ss_pred HHHHHHHHcCCcchhhhhc--CChHhHHHHHHHhhh-ccchhheeehHHHH--HHHHHhccCChHHHHhCcEE
Confidence 3467899999999998875 667788899998876 57999999999985 33445555555 55555543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00065 Score=60.66 Aligned_cols=39 Identities=23% Similarity=0.316 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
..|+||+++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~ 41 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 468999999999999999999999999999999998864
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.78 E-value=0.0004 Score=57.89 Aligned_cols=73 Identities=12% Similarity=0.157 Sum_probs=53.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCCC----------------C-HHhhccCCcEEEEccCCCC---ccc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK----------------N-PEEITRQADIIISAVGQPN---MVR 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t~----------------~-l~~~l~~ADIVIsAvG~p~---~v~ 296 (371)
|++.|||.|.+ |..+|..|.+.|. +|+.++++.. + ......++|+||.+++... ++.
T Consensus 2 k~I~IIG~G~m-G~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~ 80 (171)
T d2g5ca2 2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK 80 (171)
T ss_dssp CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH
T ss_pred CEEEEEccCHH-HHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhh
Confidence 68999999886 9999999998884 6777766421 1 1223468999999998422 222
Q ss_pred --CCCcCCCeEEEEeeec
Q 017438 297 --GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 --~d~ik~gavVIDvgin 312 (371)
.+.++++++|+|++..
T Consensus 81 ~l~~~~~~~~ii~d~~s~ 98 (171)
T d2g5ca2 81 KLSYILSEDATVTDQGSV 98 (171)
T ss_dssp HHHHHSCTTCEEEECCSC
T ss_pred hhhccccccccccccccc
Confidence 2457889999999953
|
| >d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aminoacid dehydrogenase-like, N-terminal domain superfamily: Aminoacid dehydrogenase-like, N-terminal domain family: Shikimate dehydrogenase-like domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.74 E-value=0.00063 Score=53.66 Aligned_cols=81 Identities=15% Similarity=0.235 Sum_probs=57.6
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhh
Q 017438 111 PGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNA 190 (371)
Q Consensus 111 P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~ 190 (371)
.++.+-..| +|.|.+ =+.=+++++++|+++.|..|+. +++.+.++.+.+ .++.|++|++|++.. .-++++.
T Consensus 6 t~~~~~i~g-~P~s~S-P~ihn~~~~~~gi~~~Y~~~~v----~~l~~~~~~~~~-~~~~G~nVT~P~K~~--~~~~~d~ 76 (102)
T d1npya2 6 TQLCMSLSG-RPSNFG-TTFHNYLYDKLGLNFIYKAFTT----QDIEHAIKGVRA-LGIRGCAVSMPFKET--CMPFLDE 76 (102)
T ss_dssp CEEEEEECS-SCCSHH-HHHHHHHHHHHTCCEEEEEECC----SCHHHHHHHHHH-HTCCEEEECTTCTTT--TGGGCSE
T ss_pred CEEEEEEcC-CcccCC-HHHHHHHHHHcCCCeEEeeEec----ccHHHHHHHHhc-cccceeEEehhHHHH--HHHHhhh
Confidence 345544445 567764 3466889999999999999963 246677777765 479999999999974 3556666
Q ss_pred CCc-ccccCcc
Q 017438 191 VSM-EKDVDGF 200 (371)
Q Consensus 191 I~p-~KDVDgl 200 (371)
+++ .+.+.++
T Consensus 77 ~s~~a~~igAv 87 (102)
T d1npya2 77 IHPSAQAIESV 87 (102)
T ss_dssp ECHHHHTTTCC
T ss_pred CChhhhhcCcE
Confidence 766 5555444
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.73 E-value=0.00091 Score=59.59 Aligned_cols=58 Identities=19% Similarity=0.311 Sum_probs=47.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-----------------------HHhhccCCcEEEEccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-----------------------PEEITRQADIIISAVG 290 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-----------------------l~~~l~~ADIVIsAvG 290 (371)
-+|+||+++|.|++.-+|+.+|..|+++|++|.++.++... ..+....-|++|+.+|
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG 82 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 82 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence 36899999999999888999999999999999999886421 1233456799998888
Q ss_pred C
Q 017438 291 Q 291 (371)
Q Consensus 291 ~ 291 (371)
.
T Consensus 83 ~ 83 (237)
T d1uzma1 83 L 83 (237)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.73 E-value=0.00067 Score=60.94 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+||.++|.|++.-+|+.+|..|+++||+|.++.++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~ 38 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 38 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47999999999999888999999999999999999876
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0016 Score=54.38 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC--------------------HHh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------------PEE 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~--------------------l~~ 277 (371)
++|-..-.+..|++.++. .|.+|+|+|.|+ +|...++++...|+.+++..+...+ ...
T Consensus 12 l~Cag~Tay~al~~~~~~-~G~~VlI~GaG~-vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~ 89 (168)
T d1uufa2 12 LLCAGITTYSPLRHWQAG-PGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA 89 (168)
T ss_dssp GGTHHHHHHHHHHHTTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred HHhHHHHHHHHHHHhCCC-CCCEEEEeccch-HHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHH
Confidence 356222335556665543 699999999977 6999999999999988777554211 123
Q ss_pred hccCCcEEEEccCCCCcc--cCCCcCCCeEEEEeeecC
Q 017438 278 ITRQADIIISAVGQPNMV--RGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v--~~d~ik~gavVIDvgin~ 313 (371)
..+.+|++|.++|.+..+ --++++++-.++-+|...
T Consensus 90 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 127 (168)
T d1uufa2 90 HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA 127 (168)
T ss_dssp TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC
Confidence 346689999999987754 336788888888888653
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.67 E-value=0.0024 Score=53.25 Aligned_cols=93 Identities=18% Similarity=0.286 Sum_probs=64.5
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------C-HH
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------N-PE 276 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~-l~ 276 (371)
+.|...-.+..|++.++ -.|.+|+|+|.|+ +|..+++++...|++|+++.++.. + .+
T Consensus 9 l~cag~Ta~~al~~~~~-~~g~~vlI~GaG~-vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~ 86 (168)
T d1piwa2 9 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE 86 (168)
T ss_dssp GGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred HHHHHHHHHHHHHHhCc-CCCCEEEEECCCC-cchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHH
Confidence 35644445666777665 3699999999976 599999988889999988876532 2 22
Q ss_pred hhccCCcEEEEccCCCCc--cc--CCCcCCCeEEEEeeec
Q 017438 277 EITRQADIIISAVGQPNM--VR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l~~ADIVIsAvG~p~~--v~--~d~ik~gavVIDvgin 312 (371)
......|.+|.++|.+.- +. -+.++++-.++-+|..
T Consensus 87 ~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~ 126 (168)
T d1piwa2 87 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP 126 (168)
T ss_dssp HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccc
Confidence 345567888887775432 22 2456787777888864
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.00071 Score=59.76 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=40.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIT 279 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l 279 (371)
+|+||.++|.|++.-+|+.+|..|+++|++|.++.++...+++..
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 46 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA 46 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 589999999999998999999999999999999998876665543
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.63 E-value=0.00032 Score=57.60 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=45.3
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc--ccCCCcCCCe
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM--VRGSWIKPGA 304 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~--v~~d~ik~ga 304 (371)
+-+||.|++ |++++..|.+.+..++|++|+. .++++.++++|+||.+++-..+ +-.+.-+++.
T Consensus 2 IgfIG~G~m-g~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d~~i~~v~~~l~~~~~ 80 (153)
T d2i76a2 2 LNFVGTGTL-TRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIKTVANHLNLGDA 80 (153)
T ss_dssp CEEESCCHH-HHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTTHHHHHTTTCCSSC
T ss_pred EEEEeCcHH-HHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccchhhhHHHhhhcccce
Confidence 347999996 9999998876554446787752 3566789999999999974332 2233335789
Q ss_pred EEEEeee
Q 017438 305 VIIDVGI 311 (371)
Q Consensus 305 vVIDvgi 311 (371)
+|||+.-
T Consensus 81 ivi~~s~ 87 (153)
T d2i76a2 81 VLVHCSG 87 (153)
T ss_dssp CEEECCS
T ss_pred eeeeccc
Confidence 9999874
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.62 E-value=0.00074 Score=55.74 Aligned_cols=72 Identities=19% Similarity=0.170 Sum_probs=53.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCcc---cCCCcCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMV---RGSWIKP 302 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v---~~d~ik~ 302 (371)
||.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||+++...... ..-.-..
T Consensus 2 kIgiIG~G~m-G~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~~~~~~~~~~~~~~ 80 (152)
T d1i36a2 2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (152)
T ss_dssp EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred EEEEEcHHHH-HHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCchHHHHHHhhcccC
Confidence 6899999996 9999999999999999988654 24567889999999999754321 1000123
Q ss_pred CeEEEEeeec
Q 017438 303 GAVIIDVGIN 312 (371)
Q Consensus 303 gavVIDvgin 312 (371)
+.++||+...
T Consensus 81 ~~~~id~st~ 90 (152)
T d1i36a2 81 RGIYVDINNI 90 (152)
T ss_dssp CSEEEECSCC
T ss_pred CceeeccCcC
Confidence 6789998743
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.59 E-value=0.0007 Score=55.43 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=53.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccCCCCc---c
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQPNM---V 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG~p~~---v 295 (371)
||+|||+|.+ |..++..|.+.|.+|+++.|... +..+.+..+|+||.++..+.. +
T Consensus 2 kI~IiGaG~i-G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~~ 80 (167)
T d1ks9a2 2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV 80 (167)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred EEEEECcCHH-HHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHHH
Confidence 7999999775 99999999999999999976531 234667899999999987553 1
Q ss_pred c--CCCcCCCeEEEEee
Q 017438 296 R--GSWIKPGAVIIDVG 310 (371)
Q Consensus 296 ~--~d~ik~gavVIDvg 310 (371)
+ ..++.+++.|+.+.
T Consensus 81 ~~l~~~~~~~~~Iv~~q 97 (167)
T d1ks9a2 81 KSLASTLPVTTPILLIH 97 (167)
T ss_dssp HHHHTTSCTTSCEEEEC
T ss_pred HhhccccCcccEEeecc
Confidence 1 24567788887763
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.57 E-value=0.0015 Score=58.63 Aligned_cols=38 Identities=13% Similarity=0.290 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+||.|+|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~ 38 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 37899999999999888999999999999998888554
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=96.56 E-value=0.00043 Score=62.50 Aligned_cols=39 Identities=26% Similarity=0.294 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++|+||+|+|.|+++-+|+.+|..|+++|++|.++.++.
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~ 40 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE 40 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999998889999999999999999998763
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.00096 Score=59.56 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=35.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+||.++|.|++.-+|+.+|..|+++|++|.+++++.
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~ 40 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE 40 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 8999999999999999999999999999999999874
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.00071 Score=56.68 Aligned_cols=94 Identities=11% Similarity=0.034 Sum_probs=64.9
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEI 278 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~ 278 (371)
+||++.-++..|.+..---.|++|+|.|+++.||..+.+++...|++|++..++ +.|+.+.
T Consensus 9 ~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~ 88 (179)
T d1qora2 9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVER 88 (179)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHH
Confidence 477777777777655332359999999999988999999999999998887543 3444433
Q ss_pred c------cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 279 T------RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 279 l------~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
+ +..|+|+.++|.+.+ -..+.++++-.++-+|.
T Consensus 89 v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 128 (179)
T d1qora2 89 LKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN 128 (179)
T ss_dssp HHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccc
Confidence 2 346888888876543 23345666555555553
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.0011 Score=59.30 Aligned_cols=38 Identities=29% Similarity=0.285 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
||+||.++|-|+|.-+|+.+|..|+++|++|.++.++.
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~ 38 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE 38 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 68999999999998889999999999999999998764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=96.50 E-value=0.0019 Score=58.00 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=56.7
Q ss_pred cCCHHHHHHHHH----Hh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------CH-Hh
Q 017438 219 PCTPKGCIELLH----RY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------NP-EE 277 (371)
Q Consensus 219 PcTa~gvi~lL~----~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------~l-~~ 277 (371)
+.|+.|+...++ +. ..+|+||+|+|-|.|+ ||..+|.+|.+.||+|+++.-+.. +. +-
T Consensus 14 ~aTg~GV~~~~~~~~~~~~g~~~l~g~~v~IqG~Gn-VG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~ 92 (230)
T d1leha1 14 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGN-VAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI 92 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCccc
Confidence 678888777655 33 4579999999999999 599999999999999998865421 11 12
Q ss_pred hccCCcEEEEccCCCCcccCCC
Q 017438 278 ITRQADIIISAVGQPNMVRGSW 299 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~~d~ 299 (371)
+..++||++=+.. .+.|+.+.
T Consensus 93 ~~~~cDIl~PcA~-~~~I~~~~ 113 (230)
T d1leha1 93 YGVTCDIFAPCAL-GAVLNDFT 113 (230)
T ss_dssp TTCCCSEEEECSC-SCCBSTTH
T ss_pred ccccccEeccccc-ccccChHH
Confidence 3567899884433 23455443
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.49 E-value=0.00078 Score=60.45 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=38.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE 276 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~ 276 (371)
.+|+||.++|.|++.-+|+.+|..|+++||+|.++.++..+++
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~ 47 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV 47 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 5799999999999998899999999999999999998865554
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.49 E-value=0.0024 Score=53.11 Aligned_cols=55 Identities=20% Similarity=0.433 Sum_probs=42.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC-----------------------CCCHHhhccCCcEEEEccCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR-----------------------TKNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~-----------------------t~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.||+|||++|.||..+|++|..++. ++.++... +.+.++.+++|||||.+.|.|.
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~ 80 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC
Confidence 3799999744579999999998884 56666532 2356788999999999999653
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.49 E-value=0.0016 Score=60.86 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC------------------CCHHhhccCCcEEEEccCCCC-cc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT------------------KNPEEITRQADIIISAVGQPN-MV 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t------------------~~l~~~l~~ADIVIsAvG~p~-~v 295 (371)
.-+++.|||.|.. ++.-+..|.. .. -+|.|.+++. .+..+.+++|||||++|.... ++
T Consensus 124 ~~~~l~iiGaG~Q-A~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~ 202 (320)
T d1omoa_ 124 NSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVV 202 (320)
T ss_dssp TCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCB
T ss_pred CccEEEEecCccc-HHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCccccc
Confidence 4478899999875 8777666653 33 3788887662 234577899999999999654 68
Q ss_pred cCCCcCCCeEEEEeeec
Q 017438 296 RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~~d~ik~gavVIDvgin 312 (371)
+.+|++||+.|+=+|.+
T Consensus 203 ~~~~l~~G~hv~~iGs~ 219 (320)
T d1omoa_ 203 KAEWVEEGTHINAIGAD 219 (320)
T ss_dssp CGGGCCTTCEEEECSCC
T ss_pred chhhcCCCCeEeecCCc
Confidence 99999999999999965
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.47 E-value=0.0011 Score=55.93 Aligned_cols=93 Identities=17% Similarity=0.248 Sum_probs=63.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------C-HH--h
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------N-PE--E 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~-l~--~ 277 (371)
+||...-.+..|++.++ -.|++|+|.|+++.||..+.+++...|++|+.+.++.. + .. .
T Consensus 9 l~~~~~TA~~al~~~~~-~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~ 87 (171)
T d1iz0a2 9 FPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAK 87 (171)
T ss_dssp SHHHHHHHHHHHHHTTC-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhh
Confidence 35555556667776543 47999999998777899999999999999887765421 1 11 1
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
.-+.+|+|+.++|. .+ -.-++++++-.++.+|..
T Consensus 88 ~~~g~D~v~d~~G~-~~~~~~~~l~~~G~~v~~G~~ 122 (171)
T d1iz0a2 88 AWGGLDLVLEVRGK-EVEESLGLLAHGGRLVYIGAA 122 (171)
T ss_dssp HTTSEEEEEECSCT-THHHHHTTEEEEEEEEEC---
T ss_pred ccccccccccccch-hHHHHHHHHhcCCcEEEEeCC
Confidence 23558999988883 23 123578888888888853
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.46 E-value=0.00066 Score=56.98 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=66.5
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEI 278 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~ 278 (371)
+||.+.-.+..|.+..---+|.+|+|.|+++.||..+++++...|++|.++-+. +.++.+.
T Consensus 6 l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~ 85 (183)
T d1pqwa_ 6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADE 85 (183)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccCHHHH
Confidence 356556666666555333358999999986778999999999999988776433 3444443
Q ss_pred c------cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 279 T------RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 l------~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
+ +..|+++.++|.+.+ .--+.++++..+|.+|..
T Consensus 86 v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~ 126 (183)
T d1pqwa_ 86 ILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK 126 (183)
T ss_dssp HHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCG
T ss_pred HHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccC
Confidence 3 458999999986433 123567888899999854
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.43 E-value=0.00058 Score=61.54 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~ 41 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 41 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57999999999999888999999999999999999876
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.41 E-value=0.002 Score=55.60 Aligned_cols=53 Identities=25% Similarity=0.281 Sum_probs=44.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------------CCCHHhhccCCcEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADII 285 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------------t~~l~~~l~~ADIV 285 (371)
+|.|||.|- ||.|+|..|+++|.+|+..... +.++++.++++|++
T Consensus 2 kI~ViGlG~-vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i 80 (202)
T d1mv8a2 2 RISIFGLGY-VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (202)
T ss_dssp EEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred EEEEECCCH-hHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEE
Confidence 689999988 5999999999999999988642 24567788999999
Q ss_pred EEccCCCC
Q 017438 286 ISAVGQPN 293 (371)
Q Consensus 286 IsAvG~p~ 293 (371)
+.+++.|.
T Consensus 81 ~i~VpTP~ 88 (202)
T d1mv8a2 81 FICVGTPS 88 (202)
T ss_dssp EECCCCCB
T ss_pred EEecCccc
Confidence 99999873
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.39 E-value=0.0018 Score=58.09 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=35.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+||.++|.|++.-+|+.+|..|+++||+|.+++++.
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~ 39 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR 39 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47999999999988889999999999999999998863
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=96.37 E-value=0.00081 Score=60.66 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=35.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~ 38 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6899999999999888999999999999999999876
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.37 E-value=0.0014 Score=54.39 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=64.6
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH-
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE- 276 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~- 276 (371)
.+||+..-.+..|++.++ -.|.+|+|+|.|. +|...++++...|++|+++.++. .+..
T Consensus 8 ~l~ca~~Ta~~al~~~~~-~~g~~VlV~GaG~-vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~ 85 (166)
T d1llua2 8 PILCAGVTVYKGLKQTNA-RPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVE 85 (166)
T ss_dssp GGGTHHHHHHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHH
T ss_pred HHHHHHHHHHHHHHHhCC-CCCCEEEEeeccc-cHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHH
Confidence 468876667777777654 3599999999977 59999999999999998886542 2222
Q ss_pred ---hhccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 ---EITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ---~~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.....|.+|..++.+..+. -+.++++-.++-+|..
T Consensus 86 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~ 126 (166)
T d1llua2 86 AIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLP 126 (166)
T ss_dssp HHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred HHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEec
Confidence 22344555666666554432 2567887777778854
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.36 E-value=0.0017 Score=57.80 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~ 38 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE 38 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4799999999998878999999999999999999876
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=96.34 E-value=0.0024 Score=57.05 Aligned_cols=37 Identities=30% Similarity=0.410 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+||.++|-|++.-+|+.+|..|+++|++|.++.++.
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~ 39 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP 39 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7999999999988889999999999999999998763
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.33 E-value=0.001 Score=54.92 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=67.6
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CC---
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KN--- 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~--- 274 (371)
-+||+..-.+..|+..++. .|.+|+|.|+|. +|...+.++...|+.|+++.++. .+
T Consensus 8 ~l~~~~~Ta~~al~~~~~~-~g~~vlv~G~G~-iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~ 85 (168)
T d1rjwa2 8 PIFCAGVTTYKALKVTGAK-PGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAK 85 (168)
T ss_dssp GGGTHHHHHHHHHHHHTCC-TTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHhCCC-CCCEEEEeeccc-chhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhh
Confidence 4588877778888888765 689999999977 59999999999999988885431 22
Q ss_pred -HHhhccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 275 -PEEITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 275 -l~~~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+++.....|.+|..++.+..+. -+.++++..++-+|..
T Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~ 126 (168)
T d1rjwa2 86 FMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLP 126 (168)
T ss_dssp HHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred hcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccc
Confidence 3344555666666666555432 2457888888888864
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.33 E-value=0.0013 Score=56.06 Aligned_cols=53 Identities=15% Similarity=0.273 Sum_probs=44.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-----------------------------CCCHHhhccCCcEEEEccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR-----------------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-----------------------------t~~l~~~l~~ADIVIsAvG 290 (371)
+|.|||+|.. |.++|..|.+.|.+|++..|. +.++++.+++||+||.|++
T Consensus 2 kI~ViGaG~~-GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp 80 (180)
T d1txga2 2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (180)
T ss_dssp EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred EEEEECCCHH-HHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence 6899999886 999999999999999998542 2466788999999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
...
T Consensus 81 s~~ 83 (180)
T d1txga2 81 TDG 83 (180)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.31 E-value=0.0016 Score=52.07 Aligned_cols=52 Identities=27% Similarity=0.316 Sum_probs=40.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------C-HHhh-ccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------N-PEEI-TRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~-l~~~-l~~ADIVIsAvG~ 291 (371)
|+++|+|.|.+ |+.++..|.++|..|+++....+ + |++. +.+||.+|.+++.
T Consensus 1 k~~iIiG~G~~-G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~ 74 (134)
T d2hmva1 1 KQFAVIGLGRF-GGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA 74 (134)
T ss_dssp CCEEEECCSHH-HHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred CEEEEECCCHH-HHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence 78999999885 99999999999999999975521 1 2222 6778887777764
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.30 E-value=0.0021 Score=53.47 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=68.4
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHH
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPE 276 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~ 276 (371)
.+||...-....+++.++ -.|.+|+|+|.++.+|..+++++...|+ +|+++.++ ..+..
T Consensus 8 ~l~c~~~Ta~~al~~~~~-~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~ 86 (170)
T d1jvba2 8 PLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPL 86 (170)
T ss_dssp GGGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred HHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHH
Confidence 468876666777777654 3688999999766679999988888884 88887643 12332
Q ss_pred hhc------cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EIT------RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l------~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+ ...|++|-++|.+..++ -+++++|-.++=+|..
T Consensus 87 ~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~ 130 (170)
T d1jvba2 87 AEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 130 (170)
T ss_dssp HHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred HHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccc
Confidence 222 34899999999876554 3578998888888864
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.28 E-value=0.0017 Score=58.24 Aligned_cols=37 Identities=30% Similarity=0.394 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~ 38 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN 38 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3799999999998888999999999999999999876
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.25 E-value=0.002 Score=53.68 Aligned_cols=56 Identities=23% Similarity=0.412 Sum_probs=43.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG 290 (371)
.++||.|||+|. ||..+|+.|+.++- ++.++..+. .+-.+.+++||+||.++|
T Consensus 5 ~~~KI~IiGaG~-vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag 83 (148)
T d1ldna1 5 GGARVVVIGAGF-VGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG 83 (148)
T ss_dssp TSCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred CCCeEEEECcCH-HHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecc
Confidence 578999999977 69999999998873 688876431 122477899999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 84 ~~~ 86 (148)
T d1ldna1 84 ANQ 86 (148)
T ss_dssp CCC
T ss_pred ccc
Confidence 653
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.25 E-value=0.0014 Score=54.74 Aligned_cols=55 Identities=20% Similarity=0.390 Sum_probs=42.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC------------------------CCHHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG 290 (371)
+.+||+|||+|. ||.++|..|+.+| .+|.+++... .+. +.+++|||||.++|
T Consensus 4 ~~~KI~IIGaG~-VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-~~~~~adivvitag 81 (146)
T d1ez4a1 4 NHQKVVLVGDGA-VGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-SDCKDADLVVITAG 81 (146)
T ss_dssp TBCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-HHhccccEEEEecc
Confidence 467999999977 6999999999887 4798887541 233 56799999999998
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 82 ~~~ 84 (146)
T d1ez4a1 82 APQ 84 (146)
T ss_dssp C--
T ss_pred ccc
Confidence 763
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0022 Score=57.48 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-.|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~ 40 (250)
T d1ydea1 2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE 40 (250)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468999999999988889999999999999999998764
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.22 E-value=0.00085 Score=60.73 Aligned_cols=39 Identities=23% Similarity=0.268 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+|+||.++|.|+++-+|+.+|..|+++|++|+++.++.
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~ 59 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 59 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 379999999999988889999999999999999998873
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.20 E-value=0.0023 Score=57.18 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=35.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+||.++|-|++.-+|+.+|..|+++|++|.++.++.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~ 40 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD 40 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999988889999999999999999998763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.19 E-value=0.00074 Score=60.89 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~ 41 (259)
T d1xq1a_ 3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 41 (259)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999989999999999999999999876
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.19 E-value=0.0011 Score=58.98 Aligned_cols=42 Identities=26% Similarity=0.354 Sum_probs=37.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE 276 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~ 276 (371)
.|+||+++|.|++.-+|+.+|..|+++|++|+++.++.++++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~ 43 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA 43 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 489999999999998999999999999999999988754443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.0023 Score=57.17 Aligned_cols=38 Identities=11% Similarity=0.229 Sum_probs=35.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+|.||.++|-|+|.-+|+.+|..|+++|++|.++.++.
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~ 41 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 41 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999889999999999999999998874
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.18 E-value=0.0022 Score=57.66 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+||.|+|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~ 51 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 51 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46999999999998888999999999999999998665
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.17 E-value=0.003 Score=52.89 Aligned_cols=55 Identities=20% Similarity=0.305 Sum_probs=42.9
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
..||+|||+|. ||..+|.+|..++ +++.+++.+. .+..+.+++||+||.+.|.
T Consensus 3 ~~KI~IIGaG~-VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~ 81 (150)
T d1t2da1 3 KAKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 81 (150)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CCeEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence 46899999876 6999999998888 4777776431 1345788999999999996
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 82 ~~ 83 (150)
T d1t2da1 82 TK 83 (150)
T ss_dssp SS
T ss_pred cc
Confidence 54
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.16 E-value=0.0041 Score=51.44 Aligned_cols=86 Identities=19% Similarity=0.303 Sum_probs=62.8
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHH---hhc--
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPE---EIT-- 279 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~---~~l-- 279 (371)
++.+++.++ -.|.+|+|+|.|. +|...++++...|++|+++.++. .+.. +.+
T Consensus 16 ~~a~~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T d1e3ja2 16 VHACRRAGV-QLGTTVLVIGAGP-IGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 93 (170)
T ss_dssp HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHH
T ss_pred HHHHHHhCC-CCCCEEEEEcccc-cchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhc
Confidence 556666664 3588999999876 59999999999999999986542 1111 111
Q ss_pred ---cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 280 ---RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 280 ---~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
..+|+||-++|.+..+. -++++++..++=+|...
T Consensus 94 ~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~ 132 (170)
T d1e3ja2 94 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS 132 (170)
T ss_dssp HSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred ccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCC
Confidence 34899999999887543 25789988888888653
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.15 E-value=0.0029 Score=52.29 Aligned_cols=54 Identities=24% Similarity=0.387 Sum_probs=40.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
+||.|||+|. ||.++|.+|..++ +++..++... .+-.+.+++||+||.++|.|
T Consensus 2 ~KI~IIGaG~-VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~~ 80 (142)
T d1uxja1 2 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP 80 (142)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred CeEEEECCCH-HHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeecc
Confidence 6899999977 6999999998887 5777765331 11235689999999999876
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
.
T Consensus 81 ~ 81 (142)
T d1uxja1 81 R 81 (142)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0008 Score=56.49 Aligned_cols=94 Identities=21% Similarity=0.171 Sum_probs=64.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhh
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEI 278 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~ 278 (371)
+||...-.+..|.+..---.|.+|+|.|+++.||..+.+++...|++|+++.+. +.++.+.
T Consensus 9 l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 88 (174)
T d1yb5a2 9 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDK 88 (174)
T ss_dssp THHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccccccccHHHH
Confidence 466666566666544322379999999986678999999999999998876543 2333333
Q ss_pred c------cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 279 T------RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 279 l------~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+ +..|+|+.++|.+.+- --+.++++-.++.+|.
T Consensus 89 i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 128 (174)
T d1yb5a2 89 IKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS 128 (174)
T ss_dssp HHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCC
T ss_pred hhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEec
Confidence 2 3379999888854321 1246788888888884
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.15 E-value=0.0019 Score=57.28 Aligned_cols=38 Identities=29% Similarity=0.508 Sum_probs=33.5
Q ss_pred CCCCCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++|+||.++|.|++ ++ |+.+|..|+++||+|.++.+.
T Consensus 3 ~~~L~gK~alITGas~~~GI-G~aiA~~la~~Ga~V~i~~~~ 43 (256)
T d1ulua_ 3 TVDLSGKKALVMGVTNQRSL-GFAIAAKLKEAGAEVALSYQA 43 (256)
T ss_dssp EECCTTCEEEEESCCCSSSH-HHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEeCc
Confidence 368999999999986 45 999999999999999888765
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0066 Score=50.46 Aligned_cols=86 Identities=22% Similarity=0.394 Sum_probs=62.2
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHHhhc------
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPEEIT------ 279 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~~~l------ 279 (371)
++.+++.++ -.|.+|+|+|.|. +|..+++++...|+ .|+++.+.. .+..+..
T Consensus 16 ~~a~~~~~~-~~gd~VlI~G~G~-iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~ 93 (171)
T d1pl8a2 16 IHACRRGGV-TLGHKVLVCGAGP-IGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ 93 (171)
T ss_dssp HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred HHHHHHhCC-CCCCEEEEECCCc-cHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccccccccccc
Confidence 455666665 3588999999977 59999999999998 688876541 2322211
Q ss_pred --cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 280 --RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
..+|++|-++|.+..+. -+++++|..++=+|...
T Consensus 94 ~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~ 131 (171)
T d1pl8a2 94 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS 131 (171)
T ss_dssp HTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC
T ss_pred CCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC
Confidence 36899999999877553 35688887777788654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.11 E-value=0.0024 Score=57.38 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~ 37 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 37 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 799999999999888999999999999999999876
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.08 E-value=0.0027 Score=57.18 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~ 40 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS 40 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37999999999998888999999999999999999875
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0034 Score=54.62 Aligned_cols=57 Identities=14% Similarity=0.241 Sum_probs=47.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC---------------------CCHHhhccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT---------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
..++|+|+|.|+.|.+|+.++..|+++|. +|++..|+. .++.+.++.+|++|.++|.
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 35789999999999999999999999884 799888752 2455678899999998885
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.05 E-value=0.003 Score=53.75 Aligned_cols=94 Identities=18% Similarity=0.169 Sum_probs=64.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEE-cCCcccHHHHHHHhccCCCeEEEEeCCCCCHHh-------------------
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVI-GRSNIVGMPAALLLQREDATVSIVHSRTKNPEE------------------- 277 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVI-G~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~------------------- 277 (371)
+||++.-.+..|.+..---.|.+++|+ |+++.||..+.++....|++|+..-++..+.++
T Consensus 9 l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~ 88 (189)
T d1gu7a2 9 ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQN 88 (189)
T ss_dssp CTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEecccc
Confidence 578888788888876544468899998 566668999999999999998776554332211
Q ss_pred -----------h----ccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 278 -----------I----TRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 278 -----------~----l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
. -..+|+++.++|.+.+ -.-+.++++-.++.+|.
T Consensus 89 ~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~ 138 (189)
T d1gu7a2 89 NSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGG 138 (189)
T ss_dssp HCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCC
T ss_pred chhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECC
Confidence 1 1236777777775433 12245778777888773
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.03 E-value=0.0015 Score=54.20 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=54.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCCC---------------CH-HhhccCCcEEEEccCCCC--cccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRTK---------------NP-EEITRQADIIISAVGQPN--MVRG 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t~---------------~l-~~~l~~ADIVIsAvG~p~--~v~~ 297 (371)
-+|.|||++|.||+-+..+|.+++ .++..+.+++. ++ .+...++|+++.+++... -+.+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~~~s~~~~~ 82 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHAE 82 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCcchhhhhcc
Confidence 379999999999999999997443 46666654421 11 234678999999987321 1334
Q ss_pred CCcCCCeEEEEeeecCCC
Q 017438 298 SWIKPGAVIIDVGINPVE 315 (371)
Q Consensus 298 d~ik~gavVIDvgin~~~ 315 (371)
...+.|..|||.+-.+..
T Consensus 83 ~~~~~g~~VID~Ss~fR~ 100 (144)
T d2hjsa1 83 RARAAGCSVIDLSGALEP 100 (144)
T ss_dssp HHHHTTCEEEETTCTTTT
T ss_pred ccccCCceEEeechhhcc
Confidence 456789999999977653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.02 E-value=0.005 Score=51.18 Aligned_cols=54 Identities=28% Similarity=0.482 Sum_probs=41.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-----------------------------CCHHhhccCCcEEEEc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-----------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-----------------------------~~l~~~l~~ADIVIsA 288 (371)
||+|||++|.||..+|.+|+.++. ++.++..+. .+..+.+++|||||.+
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVit 81 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT 81 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEe
Confidence 699999855579999999999883 777775431 1234678899999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 82 AG~~~ 86 (145)
T d1hyea1 82 SGVPR 86 (145)
T ss_dssp CSCCC
T ss_pred ccccc
Confidence 99653
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.00093 Score=60.14 Aligned_cols=40 Identities=25% Similarity=0.377 Sum_probs=36.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
|+||+++|.|+|.=+|+.+|..|+++|++|.++.|+.+++
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l 51 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL 51 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 8999999999999889999999999999999999874333
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.01 E-value=0.0031 Score=56.36 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+||.++|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~ 37 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 799999999999988999999999999999999775
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.00 E-value=0.0021 Score=57.66 Aligned_cols=37 Identities=32% Similarity=0.427 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~ 39 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999998888999999999999999999875
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.99 E-value=0.0024 Score=57.19 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=33.2
Q ss_pred CCCCCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeC
Q 017438 233 GFDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++|+||+++|.|+| ++ |+.+|..|+++||+|.++.+
T Consensus 3 ~~~L~gK~alVTGass~~GI-G~aiA~~la~~Ga~Vvi~~~ 42 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGY-GWAVAKSLAAAGAEILVGTW 42 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSH-HHHHHHHHHHTTCEEEEEEE
T ss_pred CcCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEeC
Confidence 468999999999986 55 99999999999999998865
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=95.96 E-value=0.004 Score=55.39 Aligned_cols=38 Identities=29% Similarity=0.323 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~ 39 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 48999999999998889999999999999999998763
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.95 E-value=0.0046 Score=53.32 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=43.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------------------------------CCCH
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------------------------------TKNP 275 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------------------------------t~~l 275 (371)
|+|.|||+|-+ |..+|.+++..|.+|+++.+. +.++
T Consensus 5 kkvaViGaG~m-G~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~ 83 (192)
T d1f0ya2 5 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 83 (192)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred EEEEEECcCHH-HHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchh
Confidence 79999999775 999999999999999999654 1355
Q ss_pred HhhccCCcEEEEccC
Q 017438 276 EEITRQADIIISAVG 290 (371)
Q Consensus 276 ~~~l~~ADIVIsAvG 290 (371)
.+.+++||+||=++.
T Consensus 84 ~~a~~~ad~ViEav~ 98 (192)
T d1f0ya2 84 ASVVHSTDLVVEAIV 98 (192)
T ss_dssp HHHTTSCSEEEECCC
T ss_pred Hhhhcccceehhhcc
Confidence 677899999998875
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.93 E-value=0.0038 Score=53.69 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..++|+|+|||+|-+ |...|..|.++|.+|+++.+.
T Consensus 40 ~~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~ 75 (179)
T d1ps9a3 40 AVQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAH 75 (179)
T ss_dssp CSSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCcEEEEECccHH-HHHHHHHHHhhccceEEEecc
Confidence 457899999999997 999999999999999999865
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.92 E-value=0.0043 Score=50.93 Aligned_cols=53 Identities=28% Similarity=0.429 Sum_probs=41.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
||+|||+|. ||.+++..|+..+ .++.+++.+. .+.++.+++||+||.++|.|
T Consensus 2 KI~IIGaG~-VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~ 80 (142)
T d1guza1 2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (142)
T ss_dssp EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred EEEEECcCH-HHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence 689999976 6999999999887 3788886442 13356789999999999865
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
.
T Consensus 81 ~ 81 (142)
T d1guza1 81 R 81 (142)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.91 E-value=0.0033 Score=52.43 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=56.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC--ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN--MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~--~v~ 296 (371)
|-+|.|||++|.+|.-+.++|.++. ..+..+.++. ........+.|+++.+++... ..-
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~~s~~~~ 80 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYA 80 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCccchhhHH
Confidence 5689999999999999999998885 3555554431 122345678899999987421 123
Q ss_pred CCCcCCCeEEEEeeecCCCC
Q 017438 297 GSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~~~~ 316 (371)
++..+.|..|||.+-.+.-+
T Consensus 81 ~~~~~~~~~VIDlSsdfR~~ 100 (154)
T d2gz1a1 81 PYAVKAGVVVVDNTSYFRQN 100 (154)
T ss_dssp HHHHHTTCEEEECSSTTTTC
T ss_pred hhhccccceehhcChhhhcc
Confidence 34567899999999876533
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.91 E-value=0.0028 Score=53.32 Aligned_cols=33 Identities=30% Similarity=0.442 Sum_probs=30.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||+|+|||+|-+ |...|..|.++|.+|+|+.+.
T Consensus 1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence 799999999987 999999999999999999764
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.88 E-value=0.003 Score=52.58 Aligned_cols=53 Identities=25% Similarity=0.325 Sum_probs=40.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
|||+|||+|. ||..+|..|+.+|. ++.+++... .+-.+.+++||+||.++|.|
T Consensus 2 kKI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~ 80 (146)
T d1hyha1 2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI 80 (146)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred CeEEEECcCH-HHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence 7999999977 69999999988773 677775431 01235689999999988865
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.87 E-value=0.002 Score=57.48 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+||.|+|.|++.-+|+.+|..|+++|++|+++.++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~ 39 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS 39 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 6899999999999988999999999999999987654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=95.84 E-value=0.0052 Score=54.47 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+||+++|.|+++ =+|+++|..|+++|++|+++.++.
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~ 41 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 41 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7999999999753 149999999999999999999864
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.84 E-value=0.0068 Score=51.30 Aligned_cols=58 Identities=17% Similarity=0.363 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsA 288 (371)
.+..+||.|||+|. ||..+|..|..+|. ++.+++.+. .+-.+.+++|||||.+
T Consensus 17 ~~~~~KV~IIGaG~-VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVit 95 (160)
T d1i0za1 17 TVPNNKITVVGVGQ-VGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVT 95 (160)
T ss_dssp CCCSSEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEEC
T ss_pred cCCCCeEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEe
Confidence 35678999999977 69999999999984 688776431 1224678999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 96 Ag~~~ 100 (160)
T d1i0za1 96 AGVRQ 100 (160)
T ss_dssp CSCCC
T ss_pred cCCcc
Confidence 98763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=95.83 E-value=0.0029 Score=56.47 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~ 39 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3899999999998888999999999999999999875
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=95.83 E-value=0.0065 Score=57.36 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc-cCC-CeEEEEeCC---------------------CCCHHhhccCCcEEEEccCCC-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ-RED-ATVSIVHSR---------------------TKNPEEITRQADIIISAVGQP- 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~-~~g-AtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG~p- 292 (371)
.-+++.|||.|.- ++.-+..+. -.+ -+|.+.+++ ..++++.++.||||+++|..+
T Consensus 127 da~~l~iiG~G~Q-A~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s 205 (340)
T d1x7da_ 127 NARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 205 (340)
T ss_dssp TCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred CCceEEEEcccHH-HHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCC
Confidence 3467777777764 664444332 233 367766554 247889999999999988654
Q ss_pred --CcccCCCcCCCeEEEEeeec
Q 017438 293 --NMVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 293 --~~v~~d~ik~gavVIDvgin 312 (371)
.+++.+|++||+.|.=+|.+
T Consensus 206 ~~Pv~~~~~l~pG~hI~aiGs~ 227 (340)
T d1x7da_ 206 YATIITPDMLEPGMHLNAVGGD 227 (340)
T ss_dssp EEEEECGGGCCTTCEEEECSCC
T ss_pred CCcccchhhcCCCCEEeecccc
Confidence 36899999999999999865
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.0014 Score=58.97 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=35.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+..|+||.++|.|++.-+|+.+|..|+++||+|.++.++
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~ 44 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 346899999999999888999999999999999999876
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.78 E-value=0.0015 Score=58.39 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=36.7
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|-+.|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~ 44 (251)
T d2c07a1 4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ 44 (251)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34679999999999988889999999999999999998763
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=95.77 E-value=0.0018 Score=58.65 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|-|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~ 38 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS 38 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4799999999998888999999999999999999876
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.75 E-value=0.0048 Score=54.16 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+||+|+|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~ 35 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV 35 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 69999999999888999999999999999998654
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.70 E-value=0.0067 Score=50.04 Aligned_cols=53 Identities=17% Similarity=0.322 Sum_probs=39.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-----------------------CCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-----------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
+||+|||+|. ||..++..|+.++. ++.+++... ..-.+.+++|||||.+.|.+
T Consensus 2 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 79 (142)
T d1y6ja1 2 SKVAIIGAGF-VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 79 (142)
T ss_dssp CCEEEECCSH-HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence 5799999976 69999999998873 688876432 12246688899999888865
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.69 E-value=0.0062 Score=50.48 Aligned_cols=53 Identities=23% Similarity=0.403 Sum_probs=41.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC-------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR-------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~-------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
.||.|||+|. ||..+|..|..++. ++.+++.+ +.+ .+.+++|||||.++|.
T Consensus 2 ~Ki~IIGaG~-VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~-~~~~~daDvVVitaG~ 79 (143)
T d1llda1 2 TKLAVIGAGA-VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAGP 79 (143)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC-HHHhhCCcEEEEeccc
Confidence 4799999976 69999999998883 67777543 123 3568999999999997
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 80 ~~ 81 (143)
T d1llda1 80 RQ 81 (143)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.66 E-value=0.0037 Score=52.46 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=64.8
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCC-------------------CCCHH
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR-------------------TKNPE 276 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~-------------------t~~l~ 276 (371)
.++|.-.-.+..+.+..---.|.+|+|+|+|. +|...++++...|+. |+++.++ .++..
T Consensus 8 pl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~-iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~ 86 (174)
T d1f8fa2 8 PLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPV 86 (174)
T ss_dssp GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred HHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCH-HHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHH
Confidence 45775555555544443334699999999976 599999999888885 4555432 23444
Q ss_pred hhcc-----CCcEEEEccCCCCccc--CCCcCCCeEEEEeeecC
Q 017438 277 EITR-----QADIIISAVGQPNMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 277 ~~l~-----~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin~ 313 (371)
+.++ .+|+||-++|.+..+. -+.++++-.++=+|...
T Consensus 87 ~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~ 130 (174)
T d1f8fa2 87 AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ 130 (174)
T ss_dssp HHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred HHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecC
Confidence 4332 2799999999876543 35688887777777643
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.65 E-value=0.0022 Score=52.88 Aligned_cols=68 Identities=19% Similarity=0.249 Sum_probs=48.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCcc---cCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMV---RGSWI 300 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v---~~d~i 300 (371)
++.+||.|.+ |.+++..|++.| .+|++++++. .+. +.++++|+||.++. |..+ -.+..
T Consensus 2 kI~fIG~G~M-G~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~-~~v~~~Div~lavk-P~~~~~v~~~l~ 78 (152)
T d1yqga2 2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATL-PELHSDDVLILAVK-PQDMEAACKNIR 78 (152)
T ss_dssp EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSC-CCCCTTSEEEECSC-HHHHHHHHTTCC
T ss_pred EEEEEcCcHH-HHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccccc-ccccccceEEEecC-HHHHHHhHHHHh
Confidence 6889999986 999999887776 7999998763 122 34678999999986 4322 22333
Q ss_pred CCCeEEEEee
Q 017438 301 KPGAVIIDVG 310 (371)
Q Consensus 301 k~gavVIDvg 310 (371)
+.+.+||.+.
T Consensus 79 ~~~~~viS~~ 88 (152)
T d1yqga2 79 TNGALVLSVA 88 (152)
T ss_dssp CTTCEEEECC
T ss_pred hcccEEeecc
Confidence 4467888765
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=95.64 E-value=0.0021 Score=57.79 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.|+|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~ 39 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 39 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999888999999999999999999875
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.61 E-value=0.0055 Score=52.35 Aligned_cols=91 Identities=19% Similarity=0.235 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhh----------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI---------------------- 278 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~---------------------- 278 (371)
||+-.++-|.+.+..-+|.+|+|-|+++-||..+.+++...|++|+...++..+.+..
T Consensus 15 TA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~ 94 (176)
T d1xa0a2 15 TAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPL 94 (176)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------C
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHh
Confidence 4444455566667777899999999988899999999999999988876654332211
Q ss_pred -ccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 279 -TRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 279 -l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
=+..|+|+..+|.+.+ -.-+.+++|-.++.+|.
T Consensus 95 ~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~ 129 (176)
T d1xa0a2 95 DKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGL 129 (176)
T ss_dssp CSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSC
T ss_pred hccCcCEEEEcCCchhHHHHHHHhCCCceEEEeec
Confidence 1234566655555433 12234566666666664
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.59 E-value=0.0075 Score=50.94 Aligned_cols=58 Identities=17% Similarity=0.351 Sum_probs=44.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsA 288 (371)
.++..||.|||+|. ||..+|.+|..++. ++.+++.+. .+-.+.+++|||||.+
T Consensus 16 ~~~~~KI~IIGaG~-VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvit 94 (159)
T d2ldxa1 16 KLSRCKITVVGVGD-VGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIIT 94 (159)
T ss_dssp CCCCCEEEEECCSH-HHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEEC
T ss_pred cCCCCeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEe
Confidence 35566899999977 69999999999883 688876441 1224667999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
.|.|.
T Consensus 95 ag~~~ 99 (159)
T d2ldxa1 95 AGARM 99 (159)
T ss_dssp CSCCC
T ss_pred ccccc
Confidence 98654
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.58 E-value=0.0055 Score=50.38 Aligned_cols=53 Identities=19% Similarity=0.340 Sum_probs=40.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
|+.|||+|. ||.+++..|+.++ .++.+++.+. .+..+.+++||+||.++|.|.
T Consensus 2 KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~ 79 (140)
T d1a5za1 2 KIGIVGLGR-VGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQ 79 (140)
T ss_dssp EEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECcCH-HHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEeccccc
Confidence 789999977 6999999888777 3677775431 123467999999999999754
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.55 E-value=0.0051 Score=51.76 Aligned_cols=93 Identities=17% Similarity=0.001 Sum_probs=63.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHh--
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEE-- 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~-- 277 (371)
+|+..-.+..|.+..---+|.+|+|.|+++.||..++++....||+|+..-++ +.+..+
T Consensus 11 g~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 90 (182)
T d1v3va2 11 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEA 90 (182)
T ss_dssp SHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHH
Confidence 55555556666555332469999999999999999999999999998877543 122111
Q ss_pred --h--ccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 278 --I--TRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 278 --~--l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
. -+..|+|+.++|.+.+ -.-+.++++..++-+|.
T Consensus 91 ~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~ 129 (182)
T d1v3va2 91 LKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGA 129 (182)
T ss_dssp HHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCC
T ss_pred HHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecc
Confidence 1 1348888888885432 12356788877887874
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.0023 Score=57.45 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=34.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.|+|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~ 43 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART 43 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3899999999999999999999999999999999876
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.50 E-value=0.0028 Score=57.12 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~ 38 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS 38 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3799999999999888999999999999999999876
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.43 E-value=0.01 Score=51.41 Aligned_cols=53 Identities=9% Similarity=0.235 Sum_probs=43.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH------Hhhcc--CCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP------EEITR--QADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l------~~~l~--~ADIVIsAvG~p 292 (371)
||+|.|++|.+|+.++..|.++|.+|+.++++.-|+ ++.++ +.|+||.+.+..
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~ 63 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT 63 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence 699999999999999999999999999998875433 45554 569999888754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.0028 Score=58.25 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+||.|+|.|++.-+|+.+|..|+++||+|.++.++.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~ 46 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL 46 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 38999999999999899999999999999999998763
|
| >d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.41 E-value=0.004 Score=57.85 Aligned_cols=92 Identities=15% Similarity=0.233 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc----CCC-------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR----EDA-------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~----~gA-------tVtv~h~~------------------ 271 (371)
|-.|++..|+-.+-+|+..++|+.|+|.+ |-.++.+|.. .|. .+++++++
T Consensus 8 ~lAglinAlki~gk~l~d~kiv~~GAGsA-g~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~ 86 (294)
T d1pj3a1 8 ALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPF 86 (294)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGG
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHh
Confidence 34678899999999999999999999987 8888887653 332 38888764
Q ss_pred --------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 --------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 --------t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ ++|++|...|.++.+++|+|+ +.-+|+=+. ||.
T Consensus 87 a~~~~~~~~~~L~e~i~~~kptvliG~S~~~g~ft~evi~~Ma~~~~~PIIFaLS-NPt 144 (294)
T d1pj3a1 87 THSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS-NPT 144 (294)
T ss_dssp CBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred hccccccchhHHHHHHHhcCCceEEEecCCCCcCCHHHHHHHHhcCCCcEEEEcc-CCC
Confidence 024666665 889999999999999999985 778888887 654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.39 E-value=0.0023 Score=57.39 Aligned_cols=37 Identities=35% Similarity=0.490 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~ 38 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 38 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4799999999999889999999999999999999876
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.38 E-value=0.0044 Score=54.57 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+||+++|.|++ ++ |+.+|+.|+++||+|.++.+..
T Consensus 4 l~gK~~lItGaag~~GI-G~aiA~~la~~Ga~Vil~~~~~ 42 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSI-AFHIARVAQEQGAQLVLTGFDR 42 (268)
T ss_dssp TTTCEEEECCCSSTTCH-HHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHcCCEEEEEeCCh
Confidence 799999999952 45 9999999999999999998753
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.36 E-value=0.0091 Score=54.82 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
..|+||.++|-|+|.=+|+.+|..|+++||+|.++.+
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~ 39 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL 39 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 4689999999999999999999999999999999854
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.30 E-value=0.019 Score=45.56 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+-++|+|+|||+|-+ |--+|..|.+.|.+||+.++..
T Consensus 26 ~~~~~k~vvViGgG~i-G~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 26 VDPEVNNVVVIGSGYI-GIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCTTCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred hccCCCEEEEECChHH-HHHHHHHhhccceEEEEEEecC
Confidence 3457899999999885 9999999999999999998764
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.27 E-value=0.016 Score=49.17 Aligned_cols=53 Identities=30% Similarity=0.325 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
|++-.+..|++.+...++.+|+|.|+++-||....+++...||+|+..-++.+
T Consensus 15 TA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~ 67 (177)
T d1o89a2 15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67 (177)
T ss_dssp HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchh
Confidence 55555666778888778889999999999999999999999999887766543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.21 E-value=0.0057 Score=51.01 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=65.3
Q ss_pred cccCCHHHHHHHHHHhCCCC-CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC------------------CC-H
Q 017438 217 FIPCTPKGCIELLHRYGFDI-KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT------------------KN-P 275 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l-~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t------------------~~-l 275 (371)
-++|...-.++.|++.+..+ .|..|+|+|.|.+ |...++++...|+ .|+++.++. ++ .
T Consensus 11 ~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~v-G~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~ 89 (172)
T d1h2ba2 11 PLADAGITAYRAVKKAARTLYPGAYVAIVGVGGL-GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPV 89 (172)
T ss_dssp GGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHH-HHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHH
T ss_pred HHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChH-HHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHH
Confidence 45777667778887776544 5899999999775 9988888888886 666665431 12 2
Q ss_pred Hhhc-----cCCcEEEEccCCCCcc--cCCCcCCCeEEEEeee
Q 017438 276 EEIT-----RQADIIISAVGQPNMV--RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 276 ~~~l-----~~ADIVIsAvG~p~~v--~~d~ik~gavVIDvgi 311 (371)
++.. ...|+||.++|.+..+ .-+.+++|..++=+|.
T Consensus 90 ~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~ 132 (172)
T d1h2ba2 90 KQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY 132 (172)
T ss_dssp HHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCC
T ss_pred HHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeC
Confidence 2222 2479999999987644 3456788777777885
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.19 E-value=0.016 Score=52.69 Aligned_cols=56 Identities=14% Similarity=0.100 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------------------CCHHhhccCCcEEE
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------------KNPEEITRQADIII 286 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------------------~~l~~~l~~ADIVI 286 (371)
-+||+|+|.|++|.+|..++..|+++|++|..+-|+. ..+.+.+..+|.|+
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 3699999999999999999999999999998775431 12345678889988
Q ss_pred EccCC
Q 017438 287 SAVGQ 291 (371)
Q Consensus 287 sAvG~ 291 (371)
...+.
T Consensus 89 ~~a~~ 93 (342)
T d1y1pa1 89 HIASV 93 (342)
T ss_dssp ECCCC
T ss_pred hhccc
Confidence 66654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.17 E-value=0.003 Score=57.08 Aligned_cols=36 Identities=33% Similarity=0.559 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+||.++|-|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~ 37 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 37 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 799999999999888999999999999999999875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.0046 Score=55.05 Aligned_cols=36 Identities=31% Similarity=0.358 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~ 36 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN 36 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 479999999998888999999999999999999875
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.14 E-value=0.012 Score=48.54 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=40.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
|+.|||+|. ||.++|..|+.++. ++.+++.+ +.+ .+.+++||+||.+.|.
T Consensus 2 KI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~adiVvitag~ 79 (142)
T d1ojua1 2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (142)
T ss_dssp EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred EEEEECcCH-HHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-HHHhccccEEEEeccc
Confidence 789999977 69999999987773 67777533 123 4789999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 80 ~~ 81 (142)
T d1ojua1 80 AR 81 (142)
T ss_dssp CC
T ss_pred cC
Confidence 54
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.07 E-value=0.0058 Score=50.52 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~ 271 (371)
.+|||+|||+|.+ |...|..|.++|++ |+++++.
T Consensus 3 ~~~kVaIIGaGpa-Gl~aA~~l~~~G~~~V~v~E~~ 37 (196)
T d1gtea4 3 YSAKIALLGAGPA-SISCASFLARLGYSDITIFEKQ 37 (196)
T ss_dssp GGCCEEEECCSHH-HHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCEEEEECChHH-HHHHHHHHHHCCCCeEEEEEec
Confidence 3799999999997 99999999999984 9999865
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.06 E-value=0.0054 Score=51.12 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=50.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccC-C---CeEEEEeCCCC---------------CH--HhhccCCcEEEEccCCC--Ccc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE-D---ATVSIVHSRTK---------------NP--EEITRQADIIISAVGQP--NMV 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~-g---AtVtv~h~~t~---------------~l--~~~l~~ADIVIsAvG~p--~~v 295 (371)
|+|.|||+.|.||+-+..+|+++ + .+++...+... ++ .+...+.|++|.++|.. .-+
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~~~s~~~ 81 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEI 81 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCHHHHHHH
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCchHHHHh
Confidence 68999999999999988655543 2 46666654320 11 13468899999999742 223
Q ss_pred cCCCcCCC--eEEEEeeecCC
Q 017438 296 RGSWIKPG--AVIIDVGINPV 314 (371)
Q Consensus 296 ~~d~ik~g--avVIDvgin~~ 314 (371)
-+.+.+.| .+|||.+-.+.
T Consensus 82 ~~~~~~~g~~~~VID~Ss~fR 102 (146)
T d1t4ba1 82 YPKLRESGWQGYWIDAASSLR 102 (146)
T ss_dssp HHHHHHTTCCCEEEECSSTTT
T ss_pred hHHHHhcCCCeecccCCcccc
Confidence 33444555 68999987654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.02 E-value=0.024 Score=47.59 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
|+.-.+..|.+.+...+|..|+|-|+++-||..+.++....||+|+...++.+
T Consensus 7 TA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~ 59 (167)
T d1tt7a2 7 TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE 59 (167)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence 56666677888887778889999999888999999999999999988877643
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.02 E-value=0.024 Score=43.73 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcccH-HHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVG-MPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VG-kpla~lL~~~gAtVtv~h~~t 272 (371)
+.|++-+||-|++ | .++|.+|.++|.+|+-++...
T Consensus 7 ~~~~ihfiGigG~-GMs~LA~~L~~~G~~VsGSD~~~ 42 (96)
T d1p3da1 7 RVQQIHFIGIGGA-GMSGIAEILLNEGYQISGSDIAD 42 (96)
T ss_dssp TCCEEEEETTTST-THHHHHHHHHHHTCEEEEEESCC
T ss_pred hCCEEEEEEECHH-HHHHHHHHHHhCCCEEEEEeCCC
Confidence 5789999999997 7 566999999999999998764
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.98 E-value=0.02 Score=47.89 Aligned_cols=55 Identities=25% Similarity=0.390 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
.|+|++|++||-+.-|.+.++.+|...|+++++|.-. +.++.+.+++||+|.+-.
T Consensus 1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~ 80 (163)
T d1pvva2 1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 80 (163)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecc
Confidence 4799999999999999999999999999999999632 246778999999999654
|
| >d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=94.95 E-value=0.07 Score=49.08 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCCH----HHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTSE----QEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~----~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..---+=..++.++|.++.++..+.+... |-+.+.++-|+.- +++|++-.+ .|-..... ..-.-+
T Consensus 52 STRTR~SFe~A~~~LGg~~i~~~~~~~~~~~~kgEsi~Dt~~vls~~--~d~iv~R~~--~~~~~~~~---~~~~~~--- 121 (310)
T d1tuga1 52 STRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY--VDAIVMRHP--QEGAARLA---TEFSGN--- 121 (310)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSSCHHHHTSCCHHHHHHHHTTT--CSEEEEEES--SBTHHHHH---TTTCTT---
T ss_pred CcchhhhHHHHHHHhccccccccccccccccCCCccHHHhhhHhhhc--chheeeech--hhhhhHHH---HHhccC---
Confidence 444444567899999999987766654421 5688888888764 788888755 32222221 111112
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcC--CcccHHHHHHHhccCC-CeEEEEeCC----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGR--SNIVGMPAALLLQRED-ATVSIVHSR---- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~--s~~VGkpla~lL~~~g-AtVtv~h~~---- 271 (371)
+-.+|.|- .+.+.||=+.+ ++.+.|+.| +++|++++++|- ++-|...++.++...+ ..+++|+-.
T Consensus 122 vPVINAg~------~~~~HP~Q~LaD~~Ti~e~~g-~l~~~~i~~vGD~~~~~v~~S~~~~~~~~~~~~~~i~~P~~~~~ 194 (310)
T d1tuga1 122 VPVLNAGD------GSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAM 194 (310)
T ss_dssp SCEEEEEE------TTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCC
T ss_pred ccEEECCC------CcccchHHHHHHHHHHHHHcC-CcccceEEEEeccccCcchHHHHHHHHhccCceEEEeCCccccc
Confidence 33456431 23456998888 555555555 699999999997 2335778887788775 689988532
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv 289 (371)
+.++++.+++||+|.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~ 229 (310)
T d1tuga1 195 PQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR 229 (310)
T ss_dssp CHHHHHHHHTTTCCEEEESCGGGTTTTCSEEEECC
T ss_pred chhcccccccccceeeeeechhhhccCCceeeecc
Confidence 247788999999988543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.94 E-value=0.013 Score=48.20 Aligned_cols=71 Identities=21% Similarity=0.306 Sum_probs=52.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccCCCCcc------cCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVGQPNMV------RGSWI 300 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG~p~~v------~~d~i 300 (371)
||-+||.|.+ |.++|..|++.|..| +.+++.. +..+.+.++|++|+....+.-+ -.+..
T Consensus 2 kIg~IGlG~M-G~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~ 79 (156)
T d2cvza2 2 KVAFIGLGAM-GYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 79 (156)
T ss_dssp CEEEECCSTT-HHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred eEEEEeHHHH-HHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence 5889999986 999999999988765 5665531 2235677899999887754421 12457
Q ss_pred CCCeEEEEeeec
Q 017438 301 KPGAVIIDVGIN 312 (371)
Q Consensus 301 k~gavVIDvgin 312 (371)
++|.++||..+.
T Consensus 80 ~~~~~iid~sT~ 91 (156)
T d2cvza2 80 REGTYWVDATSG 91 (156)
T ss_dssp CTTEEEEECSCC
T ss_pred cccccccccccC
Confidence 889999999854
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.90 E-value=0.014 Score=51.82 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||.++|-|++.-+|+.+|..|+++|++|.++.++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~ 35 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 35 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 48889999999888999999999999999999876
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.89 E-value=0.0056 Score=51.98 Aligned_cols=93 Identities=20% Similarity=0.134 Sum_probs=57.0
Q ss_pred cCCHHHHHHHHHHhCCCCCC--CEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCC--------------------CCCH
Q 017438 219 PCTPKGCIELLHRYGFDIKG--KRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR--------------------TKNP 275 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~G--K~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~--------------------t~~l 275 (371)
|++..-.+..|.+.+---.| +.|+|-|+++.||..+.+++...||+ |+.+.+. ++++
T Consensus 10 g~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~ 89 (187)
T d1vj1a2 10 GMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNV 89 (187)
T ss_dssp SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCH
T ss_pred hcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhH
Confidence 44445555555554322234 78999998777899999998889985 4334322 2344
Q ss_pred HhhccC-----CcEEEEccCCCCc-ccCCCcCCCeEEEEeee
Q 017438 276 EEITRQ-----ADIIISAVGQPNM-VRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 276 ~~~l~~-----ADIVIsAvG~p~~-v~~d~ik~gavVIDvgi 311 (371)
.+.+++ +|+|+-++|.+.+ -.-+.++++-.++-+|.
T Consensus 90 ~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~ 131 (187)
T d1vj1a2 90 AEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQ 131 (187)
T ss_dssp HHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC--
T ss_pred HHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEecc
Confidence 443333 7888888875433 23456777777777763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.88 E-value=0.013 Score=45.76 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+-..|+++|||+|-+ |--+|..|.+.|+.||++++..
T Consensus 18 ~~~p~~vvIiGgG~~-G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 18 KALPQHLVVVGGGYI-GLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp SSCCSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCCeEEEECCCHH-HHHHHHHHhhcccceEEEeeec
Confidence 334689999999875 9999999999999999998763
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.87 E-value=0.017 Score=47.74 Aligned_cols=53 Identities=21% Similarity=0.370 Sum_probs=38.1
Q ss_pred EEEEEcCCcccHHHHHHHhc-cCC--CeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQ-RED--ATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~-~~g--AtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
||+|||+++-||..+|.+|. +.+ .++.+..... .+..+.+++|||||.+.|.|
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~ 80 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR 80 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence 78999975557999998875 333 4677765321 22345789999999999965
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=94.78 E-value=0.017 Score=51.73 Aligned_cols=49 Identities=29% Similarity=0.238 Sum_probs=39.9
Q ss_pred cCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 219 PCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 219 PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-.|..|+... +++.+.+|+||+|+|=|.|+ ||..+|++|.+.|++|+.+
T Consensus 8 ~ATg~Gv~~~~~~~~~~~~~~l~g~~v~IqGfGn-VG~~~a~~L~~~Gakvv~v 60 (242)
T d1v9la1 8 YATGFGVAVATREMAKKLWGGIEGKTVAIQGMGN-VGRWTAYWLEKMGAKVIAV 60 (242)
T ss_dssp GHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEE
T ss_pred chhhHHHHHHHHHHHHHcCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEe
Confidence 3566775554 45667899999999999998 5999999999999987644
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.74 E-value=0.015 Score=48.12 Aligned_cols=54 Identities=15% Similarity=0.224 Sum_probs=39.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-------eEEEEeCC--------------------------CCCHHhhccCCcEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-------TVSIVHSR--------------------------TKNPEEITRQADIII 286 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-------tVtv~h~~--------------------------t~~l~~~l~~ADIVI 286 (371)
||+|||+++.||..++..|.+.+. ........ +.+.++.++++||||
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvVV 84 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAI 84 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEEE
Confidence 899999866689999998875431 23333211 246678999999999
Q ss_pred EccCCCC
Q 017438 287 SAVGQPN 293 (371)
Q Consensus 287 sAvG~p~ 293 (371)
.+.|.|.
T Consensus 85 itag~~~ 91 (154)
T d5mdha1 85 LVGSMPR 91 (154)
T ss_dssp ECCSCCC
T ss_pred EecccCC
Confidence 9999764
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.015 Score=50.87 Aligned_cols=38 Identities=26% Similarity=0.411 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
|+||+|+|.|++. =+|+.+|..|+++|++|.++.++.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~ 42 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK 42 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 7999999999864 2389999999999999999987643
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=94.71 E-value=0.013 Score=52.80 Aligned_cols=37 Identities=32% Similarity=0.294 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+||+|+|.|++|.+|..++..|+.+|++|..+.+..
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~ 42 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA 42 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4899999999999999999999999999999998754
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.70 E-value=0.0079 Score=48.54 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=28.1
Q ss_pred EEEEE-cCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 240 RAVVI-GRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 240 ~vvVI-G~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
||.|| |.|+ +|+.+|..|++.|++|++..|+.
T Consensus 2 ki~vigGaG~-iG~alA~~la~~G~~V~l~~R~~ 34 (212)
T d1jaya_ 2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEEeCCcH-HHHHHHHHHHHCCCEEEEEECCH
Confidence 57888 6666 59999999999999999999874
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.70 E-value=0.012 Score=48.75 Aligned_cols=54 Identities=17% Similarity=0.311 Sum_probs=39.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC----e---EEEEeCC--------------------------CCCHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA----T---VSIVHSR--------------------------TKNPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA----t---Vtv~h~~--------------------------t~~l~~~l~~ADIV 285 (371)
-||+|+|+++.||..++.+|...+. + ..++... +.+.++.+++||||
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advV 84 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA 84 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEE
Confidence 3899999976689999999887652 1 1222110 24677899999999
Q ss_pred EEccCCC
Q 017438 286 ISAVGQP 292 (371)
Q Consensus 286 IsAvG~p 292 (371)
|.+.|.|
T Consensus 85 iitaG~~ 91 (154)
T d1y7ta1 85 LLVGAAP 91 (154)
T ss_dssp EECCCCC
T ss_pred EeecCcC
Confidence 9999965
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=94.66 E-value=0.011 Score=49.82 Aligned_cols=33 Identities=39% Similarity=0.628 Sum_probs=29.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-|+|+|||+|-+ |-.+|..|+++|.+|+|+.+.
T Consensus 6 ~~kVvVIGaGia-Gl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 6 QKRVVVLGSGVI-GLSSALILARKGYSVHILARD 38 (268)
T ss_dssp SCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECccHH-HHHHHHHHHHCCCCEEEEeCC
Confidence 478999999775 999999999999999999763
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.61 E-value=0.024 Score=51.02 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=29.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
|+|+|.|++|.+|+.++..|+++|.+|+.+.+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 89999999999999999999999999998853
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.44 E-value=0.04 Score=41.96 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=34.9
Q ss_pred CEEEEEcCCcccHH-HHHHHhccCCCeEEEEeCCCCCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGM-PAALLLQREDATVSIVHSRTKNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGk-pla~lL~~~gAtVtv~h~~t~~l~~~l~~ADI 284 (371)
.++-+||-|++ |. ++|.+|.++|+.|+-+++......+.+++..+
T Consensus 2 ~~ihfiGIgG~-GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi 47 (89)
T d1j6ua1 2 MKIHFVGIGGI-GMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGI 47 (89)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTC
T ss_pred cEEEEEeECHH-HHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCC
Confidence 47889999997 87 78999999999999998875444444554443
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.39 E-value=0.021 Score=48.86 Aligned_cols=73 Identities=30% Similarity=0.508 Sum_probs=51.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN--- 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~--- 293 (371)
.||.|+|++|.+|.-+..+|.++- .++..+.+++ .+.++...++|+|+.+++...
T Consensus 2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~~~s~~ 81 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGASYD 81 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEccccHHHHH
Confidence 379999999999999999998754 5665554331 133345567999999998532
Q ss_pred cccCCCcCCCeEEEEeeecCC
Q 017438 294 MVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin~~ 314 (371)
++.. ..+..|||.+-.+.
T Consensus 82 ~~~~---~~~~~VIDlSadfR 99 (176)
T d1vkna1 82 LVRE---LKGVKIIDLGADFR 99 (176)
T ss_dssp HHTT---CCSCEEEESSSTTT
T ss_pred HHHh---hccceEEecCcccc
Confidence 2332 24789999997754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.35 E-value=0.022 Score=51.81 Aligned_cols=56 Identities=14% Similarity=0.173 Sum_probs=44.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------C---CHHhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------K---NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~---~l~~~l~~ADIVIsAvG~ 291 (371)
-++.+|+|.|++|.+|..++..|+++|.+|+++.+.. . ++.+.++..|.||..++.
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~ 89 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 89 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence 4788999999999999999999999999999986431 1 233456789999976653
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.33 E-value=0.021 Score=42.61 Aligned_cols=55 Identities=29% Similarity=0.309 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
|+.-++..+.+.+..-+|.+++|.|+++-||....+++...|++|+.+-++.++.
T Consensus 15 TA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred HHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 4444455566666666899999999999999999999999999998876655443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.30 E-value=0.016 Score=47.95 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=39.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEE--eCCC--------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIV--HSRT--------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~--h~~t--------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
++|+|.|++|.+|+.++..|+++|.+|+++ .|+. .++.+.++.+|.||..++.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEee
Confidence 689999999999999999999999765443 3331 1234567889999977664
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=94.27 E-value=0.041 Score=48.88 Aligned_cols=86 Identities=22% Similarity=0.302 Sum_probs=67.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC----------------------------CC
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR----------------------------TK 273 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~----------------------------t~ 273 (371)
.|++..++-.+.+|+..+++++|+|.+ |..++.+|.+.+. .++.++++ ..
T Consensus 11 Agll~a~~~~g~~l~d~riv~~GAGsA-g~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~~~~ 89 (222)
T d1vl6a1 11 AAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSG 89 (222)
T ss_dssp HHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCS
T ss_pred HHHHHHHHHhCCChhhcEEEEEChHHH-HHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchhhhc
Confidence 578899999999999999999999987 9999999998885 79999875 13
Q ss_pred CHHhhccCCcEEEEccCCCCcccCCCcC---CCeEEEEee
Q 017438 274 NPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVG 310 (371)
Q Consensus 274 ~l~~~l~~ADIVIsAvG~p~~v~~d~ik---~gavVIDvg 310 (371)
++.+.++.+|+++... .++.+++|+++ +.-+|+=+.
T Consensus 90 ~l~~~l~g~~~~~g~~-~~~~~~~e~m~~~~~rPIIFpLS 128 (222)
T d1vl6a1 90 DLETALEGADFFIGVS-RGNILKPEWIKKMSRKPVIFALA 128 (222)
T ss_dssp CHHHHHTTCSEEEECS-CSSCSCHHHHTTSCSSCEEEECC
T ss_pred chHhhccCcceecccc-ccccccHHHHhhcCCCCEEEecC
Confidence 5677888999877555 35666665543 345666555
|
| >d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Pig roundworm (Ascaris suum) [TaxId: 6253]
Probab=94.25 E-value=0.01 Score=55.35 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc----CCC-------eEEEEeCC-------------------
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR----EDA-------TVSIVHSR------------------- 271 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~----~gA-------tVtv~h~~------------------- 271 (371)
-.|++..|+-.+.+|+..+++++|+|.+ |-.++.+|.. .|. .+++|+++
T Consensus 9 lAglinAlki~gk~l~d~kivi~GAGaA-g~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a~ 87 (308)
T d1o0sa1 9 VAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAK 87 (308)
T ss_dssp HHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCB
T ss_pred HHHHHHHHHHhCCCHHHcEEEEECcCHH-HHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHHH
Confidence 3678899999999999999999999987 8888777653 342 48999765
Q ss_pred ----CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 ----TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 ----t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ +-+++|.+.|.++.+++++++ +.-+|+=+. ||.
T Consensus 88 ~~~~~~~l~~~i~~~kptvliG~s~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 141 (308)
T d1o0sa1 88 DMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS-NPT 141 (308)
T ss_dssp SSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred hcccCCcHHHHHhccccccEEecccccCCCCHHHHHHHHhhCCCcEEEEcc-CCC
Confidence 124555544 347899999999999999985 677888877 654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.12 E-value=0.011 Score=50.44 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=28.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+|.|||+|-+ |..+|.++++.|.+|+++++.
T Consensus 5 ~~vaViGaG~m-G~~iA~~~a~~G~~V~l~D~~ 36 (186)
T d1wdka3 5 KQAAVLGAGIM-GGGIAYQSASKGTPILMKDIN 36 (186)
T ss_dssp SSEEEECCHHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECC
Confidence 68999999775 999999999999999999764
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=94.11 E-value=0.013 Score=48.81 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=49.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC----------C-------CHHhhccCCcEEEEccCCC--Cccc
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------K-------NPEEITRQADIIISAVGQP--NMVR 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t----------~-------~l~~~l~~ADIVIsAvG~p--~~v~ 296 (371)
||.|||++|.||.-+..+|+++. .++....++. + .-.+..+++|++|.|++.. .-+-
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~~~s~~~~ 81 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYTEKVY 81 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecCchHHHHHh
Confidence 69999999999999997666432 5666554331 0 1124568999999999731 1122
Q ss_pred CCCcCCC--eEEEEeeecCC
Q 017438 297 GSWIKPG--AVIIDVGINPV 314 (371)
Q Consensus 297 ~d~ik~g--avVIDvgin~~ 314 (371)
+..++.| ++|||.+-.+.
T Consensus 82 ~~l~~~g~~~~VIDlSsdfR 101 (147)
T d1mb4a1 82 PALRQAGWKGYWIDAASTLR 101 (147)
T ss_dssp HHHHHTTCCSEEEESSSTTT
T ss_pred HHHHHcCCceEEEeCCcccc
Confidence 2334444 68999997764
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.99 E-value=0.022 Score=45.26 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=39.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------C---HHh-hccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------N---PEE-ITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~---l~~-~l~~ADIVIsAvG~p 292 (371)
+|+|+|.|.+ |+.++..|.++|..|++...... + |++ -+++||.+|.+++..
T Consensus 2 ~IvI~G~G~~-G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d 76 (132)
T d1lssa_ 2 YIIIAGIGRV-GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 76 (132)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred EEEEECCCHH-HHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH
Confidence 6999999885 99999999999999999976421 1 112 267788888877754
|
| >d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain domain: GDP-mannose 6-dehydrogenase, GDP-binding domain species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.99 E-value=0.053 Score=43.59 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhcc
Q 017438 235 DIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITR 280 (371)
Q Consensus 235 ~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~ 280 (371)
.+.+|+|.|+|.+ +.-...++..|..+|++|.+..-. ..++.+.++
T Consensus 10 ~~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~ 89 (136)
T d1mv8a3 10 SHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVA 89 (136)
T ss_dssp TSSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHH
T ss_pred hcCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhhh
Confidence 4679999999954 233667889999999999988520 246778899
Q ss_pred CCcEEEEccCCCCccc-CCCcCCCeEEEEee
Q 017438 281 QADIIISAVGQPNMVR-GSWIKPGAVIIDVG 310 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~-~d~ik~gavVIDvg 310 (371)
+||+||.++..+.+.+ ...++++.+|||+-
T Consensus 90 ~~D~ivi~t~h~~f~~l~~~~~~~~~I~D~~ 120 (136)
T d1mv8a3 90 SSDVLVLGNGDELFVDLVNKTPSGKKLVDLV 120 (136)
T ss_dssp HCSEEEECSCCGGGHHHHHSCCTTCEEEESS
T ss_pred hceEEEEEeCCHHHHHHHHHhcCCCEEEECC
Confidence 9999999999888732 12355678999964
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=93.95 E-value=0.01 Score=49.52 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=49.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH-------------------------HhhccCCcEEEEccCCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP-------------------------EEITRQADIIISAVGQPNM 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l-------------------------~~~l~~ADIVIsAvG~p~~ 294 (371)
+|-|||.|.+ |.++|..|+++|.+|++++++.... ...+..+++++..+.....
T Consensus 3 kIGvIGlG~M-G~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T d1pgja2 3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (178)
T ss_dssp SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred EEEEEeehHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcch
Confidence 5889999986 9999999999999999998753211 1233455555544443221
Q ss_pred c------cCCCcCCCeEEEEeeecC
Q 017438 295 V------RGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 295 v------~~d~ik~gavVIDvgin~ 313 (371)
+ -...+++|.++||.+...
T Consensus 82 ~~~~~~~~~~~~~~~~iii~~st~~ 106 (178)
T d1pgja2 82 TDSTIEQLKKVFEKGDILVDTGNAH 106 (178)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hhhhhhhhhhhccccceecccCccc
Confidence 1 112468899999988543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=93.90 E-value=0.027 Score=48.96 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=30.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-+||+|+|++|.+|+.++..|+++|.+|++..|.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 36 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP 36 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4579999999999999999999999999998775
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.90 E-value=0.011 Score=50.83 Aligned_cols=36 Identities=28% Similarity=0.378 Sum_probs=32.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.|.++|-|++.-+|+.+|..|+++||+|.++.++..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~ 36 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE 36 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 488999999888899999999999999999988653
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.76 E-value=0.025 Score=50.15 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=28.7
Q ss_pred CEE-EEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRA-VVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~v-vVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||| +|.|++.-+|+.+|..|+++|++|.++.++
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~ 34 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 34 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 555 666888878999999999999999999876
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.70 E-value=0.025 Score=47.63 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+-++|+|||+|-. |-..|..|.++|.+|+|+..+
T Consensus 4 ~~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 4 KTGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CCCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence 4578999999887 999999999999999999654
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=93.67 E-value=0.05 Score=46.23 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC---C----eEEEEeCC--------------------------CCCHHhhccCCc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED---A----TVSIVHSR--------------------------TKNPEEITRQAD 283 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g---A----tVtv~h~~--------------------------t~~l~~~l~~AD 283 (371)
+--+|+|+|+++-||..++.+|++.+ . .+.+.+.. +.+.++.++++|
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD 102 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 102 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence 44589999997778999999887532 1 23333221 357788999999
Q ss_pred EEEEccCCCC
Q 017438 284 IIISAVGQPN 293 (371)
Q Consensus 284 IVIsAvG~p~ 293 (371)
+||...|.|.
T Consensus 103 vVvi~ag~~r 112 (175)
T d7mdha1 103 WALLIGAKPR 112 (175)
T ss_dssp EEEECCCCCC
T ss_pred eEEEeeccCC
Confidence 9999988653
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=93.62 E-value=0.059 Score=45.46 Aligned_cols=56 Identities=20% Similarity=0.344 Sum_probs=38.5
Q ss_pred CCCEEEEEcCCcccHHHH--HHHhccCC----CeEEEEeCC--------------------------CCCHHhhccCCcE
Q 017438 237 KGKRAVVIGRSNIVGMPA--ALLLQRED----ATVSIVHSR--------------------------TKNPEEITRQADI 284 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpl--a~lL~~~g----AtVtv~h~~--------------------------t~~l~~~l~~ADI 284 (371)
+.-||+|||+|.+ |.+. ..+|.... .++..++.. +.|.++.++.||+
T Consensus 2 k~~KI~iIGaGsv-~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~ 80 (167)
T d1u8xx1 2 KSFSIVIAGGGST-FTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDF 80 (167)
T ss_dssp CCEEEEEECTTSS-SHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSE
T ss_pred CCceEEEECCChh-hhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCE
Confidence 3457999999874 6552 23333222 367777533 3588899999999
Q ss_pred EEEccCCCC
Q 017438 285 IISAVGQPN 293 (371)
Q Consensus 285 VIsAvG~p~ 293 (371)
||+++|.+.
T Consensus 81 Vvitag~~~ 89 (167)
T d1u8xx1 81 VMAHIRVGK 89 (167)
T ss_dssp EEECCCTTH
T ss_pred EEECCCcCC
Confidence 999999754
|
| >d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Domestic pigeon (Columba livia) [TaxId: 8932]
Probab=93.61 E-value=0.024 Score=52.60 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC----C-------CeEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----D-------ATVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~----g-------AtVtv~h~~------------------ 271 (371)
|-.|++..++-.+.+|+..++|+.|+|-+ |-.++.+|... | -.+++|+++
T Consensus 8 ~lAglinAlki~gk~l~d~kiV~~GAGsA-g~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a 86 (298)
T d1gq2a1 8 AVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFA 86 (298)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGC
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHH
Confidence 34678999999999999999999999987 88888877522 2 258899765
Q ss_pred -----CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 -----TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 -----t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..++.+.++ +.+++|.+.+.++.+++|+++ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~l~~~i~~vkptvliG~s~~~g~ft~evv~~ma~~~~~PIIFaLS-NPt 141 (298)
T d1gq2a1 87 HEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALS-NPT 141 (298)
T ss_dssp BSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred HHhhhhhhhHHHhhccChheeEecccccCcCCHHHHHHHHhhCCCCEEEEcc-CCC
Confidence 124455544 378999999999999999885 567887777 553
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.59 E-value=0.022 Score=45.50 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~ 271 (371)
.||+|+|||+|-+ |..+|..|.+.+ .+||+.++.
T Consensus 1 ~gkrivIvGgG~~-G~e~A~~l~~~~~~~~Vtlie~~ 36 (186)
T d1fcda1 1 AGRKVVVVGGGTG-GATAAKYIKLADPSIEVTLIEPN 36 (186)
T ss_dssp CCCEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCcEEEECccHH-HHHHHHHHHHcCCCCcEEEEECC
Confidence 4899999999886 999999998876 589998654
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.57 E-value=0.054 Score=46.83 Aligned_cols=38 Identities=39% Similarity=0.533 Sum_probs=31.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhc--------------------cCCC-eEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQ--------------------REDA-TVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~--------------------~~gA-tVtv~h~~t 272 (371)
.++.||+|+|||.|++ +.=+|.+|+ +.|+ +|+++-|++
T Consensus 35 ~~~~gk~VvVIGgGNv-AlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg 93 (216)
T d1lqta1 35 PDLSGARAVVIGNGNV-ALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 93 (216)
T ss_dssp CCCCSSEEEEECCSHH-HHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred ccccCceEEEECCCch-hHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence 5688999999999995 888888776 5676 799998874
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=93.54 E-value=0.023 Score=43.96 Aligned_cols=38 Identities=11% Similarity=-0.046 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+|+|||.|.. |--+|..|.....+|++++++.
T Consensus 28 ~~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 28 ELFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp GGGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTT
T ss_pred hhcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecC
Confidence 3579999999999998 9999999998887777776654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=93.52 E-value=0.034 Score=50.26 Aligned_cols=48 Identities=23% Similarity=0.189 Sum_probs=39.8
Q ss_pred cCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEE
Q 017438 219 PCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSI 267 (371)
Q Consensus 219 PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv 267 (371)
-.|..|++.. |++.+.+++||+|+|=|.|+ ||..++..|.+.|+.|+.
T Consensus 13 eATG~Gv~~~~~~~~~~~~~~l~g~~v~IQGfGn-VG~~~a~~L~e~Gakvva 64 (255)
T d1bgva1 13 EATGYGSVYYVEAVMKHENDTLVGKTVALAGFGN-VAWGAAKKLAELGAKAVT 64 (255)
T ss_dssp THHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSH-HHHHHHHHHHHHTCEEEE
T ss_pred ccchHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEE
Confidence 4677776554 45568899999999999988 599999999999998653
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=93.46 E-value=0.044 Score=45.11 Aligned_cols=54 Identities=24% Similarity=0.358 Sum_probs=39.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC--------------------------CCCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR--------------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG 290 (371)
.||.|||+.|-||..+|..|..++. ++.++... +.+ .+.+++|||||.+.|
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~-~~~~~~aDiVvitaG 79 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVITAG 79 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC-GGGGTTCSEEEECCC
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC-HHHhhhcCEEEEecc
Confidence 3799999544479999999998883 56666421 112 356789999999988
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 80 ~~~ 82 (142)
T d1o6za1 80 IPR 82 (142)
T ss_dssp CCC
T ss_pred ccc
Confidence 653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.43 E-value=0.021 Score=49.16 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHHHHHHHHh-CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 222 PKGCIELLHRY-GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 222 a~gvi~lL~~~-~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
....++..+.- .-.-+.|+|+|||+|-+ |...|..|.++|.+|+|+.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~ 62 (370)
T d2iida1 13 YEEFLEIARNGLKATSNPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEAS 62 (370)
T ss_dssp HHHHHHHHHHCSCCCSSCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHHHHhcCCCCCCCCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence 35555555432 12335789999999886 999999999999999999764
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.43 E-value=0.034 Score=43.79 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=31.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+++|||+|-+ |--+|..|.+.|++||++++..
T Consensus 22 p~~v~IiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGSGYI-AVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECCchH-HHHHHHHHHhccccceeeehhc
Confidence 589999999875 9999999999999999999864
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.39 E-value=0.027 Score=47.46 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=39.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-----------CCHH----hhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-----------KNPE----EITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-----------~~l~----~~l~~ADIVIsAvG~p 292 (371)
|+|+|+|++|.+|+.++..|+++|. +|+.+.|+. .++. ......|.||.++|..
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~ 73 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT 73 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhccccchheeeeeeeee
Confidence 8999999999999999999999986 566555442 1222 2234469999888753
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=93.37 E-value=0.045 Score=47.29 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|.|+|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~ 35 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 5678889888789999999999999999998764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.34 E-value=0.038 Score=43.81 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+|+++|||+|-+ |--+|..|.++|.+||++++..
T Consensus 29 ~~~~vvIIGgG~i-G~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 29 PQSRLLIVGGGVI-GLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEECcchh-HHHHHHHhhcccceEEEEeecc
Confidence 5799999999875 9999999999999999998764
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=93.29 E-value=0.047 Score=45.49 Aligned_cols=53 Identities=17% Similarity=0.064 Sum_probs=37.6
Q ss_pred EEEEEcCCcccHHHHHHHhc--cC----CCeEEEEeCC-----------------------CCCHHhhccCCcEEEEccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQ--RE----DATVSIVHSR-----------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~--~~----gAtVtv~h~~-----------------------t~~l~~~l~~ADIVIsAvG 290 (371)
|++|||+|. +|.+.+...+ .. ..++.+.+.. +.+.++.+++||+||.++|
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~ 80 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR 80 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence 689999987 4777664322 11 2467777543 4577899999999999999
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.+.
T Consensus 81 ~~~ 83 (162)
T d1up7a1 81 PGG 83 (162)
T ss_dssp TTH
T ss_pred cCC
Confidence 763
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=93.29 E-value=0.026 Score=45.16 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-..|+++|||.|-+ |--+|..|.+.|..||++++..
T Consensus 24 ~~p~~vvIiGgG~I-G~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGGGII-GLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCeEEEECCCHH-HHHHHHHhhcCCCEEEEEEeec
Confidence 34689999999775 9999999999999999998764
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=93.28 E-value=0.015 Score=49.18 Aligned_cols=76 Identities=14% Similarity=0.317 Sum_probs=51.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccC-CCeEEEEe--CC-C---C---------------------CHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE-DATVSIVH--SR-T---K---------------------NPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h--~~-t---~---------------------~l~~~l~~ADIVIsAvG 290 (371)
.+|.|||++|.+|.-+..+|.++ ..++.-+. ++ . + +......+.|+++.+.+
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~alp 81 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATA 81 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECSC
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeecccc
Confidence 37999999999999999999987 55654332 11 0 1 11223467899999987
Q ss_pred CCC--cccCCCcCCCeEEEEeeecCC
Q 017438 291 QPN--MVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 291 ~p~--~v~~d~ik~gavVIDvgin~~ 314 (371)
... -+-+...+.|..|||.+-.+.
T Consensus 82 ~~~s~~~~~~~~~~~~~vIDlSadfR 107 (179)
T d2g17a1 82 HEVSHDLAPQFLQAGCVVFDLSGAFR 107 (179)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred chhHHHHhhhhhhcCceeeccccccc
Confidence 421 123344677999999997654
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=93.25 E-value=0.038 Score=49.18 Aligned_cols=48 Identities=33% Similarity=0.365 Sum_probs=38.2
Q ss_pred CCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-CCCeEEEE
Q 017438 220 CTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-EDATVSIV 268 (371)
Q Consensus 220 cTa~gvi----~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-~gAtVtv~ 268 (371)
.|..|+. +.+++.+.+++||+|+|=|.|+ ||..++..|.+ .|+.|+.+
T Consensus 9 ATg~Gv~~~~~~~~~~~~~~l~g~~vaIqG~Gn-VG~~~a~~L~~e~Ga~vv~v 61 (234)
T d1b26a1 9 ATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGN-VGQFAALLISQELGSKVVAV 61 (234)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSH-HHHHHHHHHHHHHCCEEEEE
T ss_pred hhhHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCCceEEe
Confidence 4566655 5566778999999999999998 59999999965 59976644
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.24 E-value=0.058 Score=41.86 Aligned_cols=36 Identities=25% Similarity=0.291 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
..|+++|||+|-+ |--+|..|.+.|..||++++..+
T Consensus 21 ~p~~v~IiGgG~i-g~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGGGYI-GIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECCCcc-ceeeeeeecccccEEEEEEecce
Confidence 3589999999885 99999999999999999998753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.11 E-value=0.037 Score=43.28 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-|+++|||+|-+ |--+|..|.+.|++||++++..
T Consensus 21 p~~vvIiGgG~i-g~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAGYI-GVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCChh-hHHHHHHhhccccEEEEEeecc
Confidence 489999999885 9999999999999999998875
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.01 E-value=0.082 Score=40.90 Aligned_cols=36 Identities=14% Similarity=0.221 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
..+|+++|||.|.+ |--+|..|.+.|+.|+++++..
T Consensus 20 ~~~~~vvVvGgG~i-g~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 20 EPGSTVVVVGGSKT-AVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHhcchhheEeeccc
Confidence 35899999999885 9999999999999999998864
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=93.00 E-value=0.036 Score=47.51 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=31.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-|||+|+|++|.+|+.++..|+++|.+|++..|..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~ 37 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 37 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence 47899999999999999999999999999987753
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=92.92 E-value=0.098 Score=43.73 Aligned_cols=76 Identities=14% Similarity=0.247 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------C-CHHhh-----ccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------K-NPEEI-----TRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~-~l~~~-----l~~ADIVIsA 288 (371)
-.|.+|+|+|.|++ |...++.+...|| .|+++.... + ..++. -..+|++|-+
T Consensus 27 ~~G~~VlV~G~G~i-Gl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 27 TPGSTCAVFGLGCV-GLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp CTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCEEEEECCChH-HHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 46899999999885 9999999999998 577775442 1 11211 1458999999
Q ss_pred cCCCCcccC--CCcCCC-eEEEEeeec
Q 017438 289 VGQPNMVRG--SWIKPG-AVIIDVGIN 312 (371)
Q Consensus 289 vG~p~~v~~--d~ik~g-avVIDvgin 312 (371)
+|.+..+.. +++++| -.++=+|..
T Consensus 106 ~G~~~~~~~a~~~~~~g~G~~v~vG~~ 132 (174)
T d1e3ia2 106 AGTAQTLKAAVDCTVLGWGSCTVVGAK 132 (174)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCCS
T ss_pred cccchHHHHHHHHhhcCCeEEEecCCC
Confidence 999876543 567774 344557754
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=92.91 E-value=0.07 Score=44.01 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 236 IKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
|+|+++++||=+ +-|-..+..++...|+++++|.-. +.++++.+++||+|.+-.
T Consensus 1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~ 80 (161)
T d1vlva2 1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (161)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence 689999999932 336889999999999999998642 357788999999999755
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.90 E-value=0.041 Score=43.61 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=31.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-|+++|||.|-+ |--+|..|.+.|.+||++++..
T Consensus 22 pk~vvIvGgG~i-G~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYI-AVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCCcc-HHHHHHHHhcCCcEEEEEeecc
Confidence 489999999875 9999999999999999999875
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.90 E-value=0.059 Score=48.07 Aligned_cols=47 Identities=28% Similarity=0.405 Sum_probs=36.4
Q ss_pred CCHHHHH----HHHHHhCCC-CCCCEEEEEcCCcccHHHHHHHhcc-CCCeEEE
Q 017438 220 CTPKGCI----ELLHRYGFD-IKGKRAVVIGRSNIVGMPAALLLQR-EDATVSI 267 (371)
Q Consensus 220 cTa~gvi----~lL~~~~i~-l~GK~vvVIG~s~~VGkpla~lL~~-~gAtVtv 267 (371)
.|..|+. +.+++++.+ |+||+|+|-|.|+ ||..++.+|.+ .|+.|+-
T Consensus 9 ATg~Gv~~~~~~~~~~~g~~~l~g~~v~IqGfGn-VG~~~a~~L~~~~G~kvv~ 61 (239)
T d1gtma1 9 ATARGASYTIREAAKVLGWDTLKGKTIAIQGYGN-AGYYLAKIMSEDFGMKVVA 61 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSH-HHHHHHHHHHHTTCCEEEE
T ss_pred hhhHHHHHHHHHHHHHhCCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCcceee
Confidence 4777766 555666764 9999999999998 59999998875 5886543
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.86 E-value=0.032 Score=48.14 Aligned_cols=76 Identities=20% Similarity=0.319 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC---CCccc--
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVR-- 296 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~---p~~v~-- 296 (371)
|++|+|.|||.|.- |++=|+.|...|.+|+|-.|.. .++.|.++.||||...++- +.+.+
T Consensus 14 ik~k~IaViGYGsQ-G~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy~~~ 92 (182)
T d1np3a2 14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (182)
T ss_dssp HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred HCCCEEEEEeeCcH-hHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecchHHHHHHHHHh
Confidence 47999999999886 9999999999999999987763 3567899999999988872 22221
Q ss_pred -CCCcCCCe-EEEEeeec
Q 017438 297 -GSWIKPGA-VIIDVGIN 312 (371)
Q Consensus 297 -~d~ik~ga-vVIDvgin 312 (371)
...+|+|+ +.+-=|+|
T Consensus 93 I~p~lk~g~~L~FaHGfn 110 (182)
T d1np3a2 93 IEPNLKKGATLAFAHGFS 110 (182)
T ss_dssp TGGGCCTTCEEEESCCHH
T ss_pred hhhhcCCCcEEEEeccce
Confidence 12467775 44444444
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.84 E-value=0.09 Score=45.67 Aligned_cols=53 Identities=26% Similarity=0.328 Sum_probs=40.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhcc--------------------CCC-eEEEEeCCC--------CCHHhhccCCc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQR--------------------EDA-TVSIVHSRT--------KNPEEITRQAD 283 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~--------------------~gA-tVtv~h~~t--------~~l~~~l~~AD 283 (371)
..+++||+|+|||.|++ +.=+|..|++ .|+ +|+++.|+. +.+.+.....+
T Consensus 34 ~~~~~gk~VvVIGgGNV-AlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~~~~~ft~~Elre~~~~~~ 112 (225)
T d1cjca1 34 APDLSCDTAVILGQGNV-ALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPG 112 (225)
T ss_dssp CCCTTSSEEEEESCSHH-HHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTT
T ss_pred CccccCceEEEECCchh-HHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcChHhCCCCchhhhcccccCC
Confidence 35788999999999995 9999998887 475 799998875 34556665555
Q ss_pred EEE
Q 017438 284 III 286 (371)
Q Consensus 284 IVI 286 (371)
+-+
T Consensus 113 ~~~ 115 (225)
T d1cjca1 113 TRP 115 (225)
T ss_dssp EEE
T ss_pred Ccc
Confidence 544
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.84 E-value=0.042 Score=50.05 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+.|+|+|||+|-. |-.+|..|.++|..|+|+.++.
T Consensus 1 k~KKI~IIGaG~s-GL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGAGFS-GAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhCCCCEEEEECCC
Confidence 4699999999887 9999999999999999998764
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=92.83 E-value=0.069 Score=46.91 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=45.6
Q ss_pred CCCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC----------------C----HHhh
Q 017438 235 DIKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK----------------N----PEEI 278 (371)
Q Consensus 235 ~l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~----l~~~ 278 (371)
+|+||+|+|-+. ||-.|..+|..+..+||.||++|..+. + +.+.
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~ 82 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS 82 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhh
Confidence 689999998753 455699999999999999999986431 1 2345
Q ss_pred ccCCcEEEEccCCCCc
Q 017438 279 TRQADIIISAVGQPNM 294 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~ 294 (371)
+.++|++|.++-...+
T Consensus 83 ~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 83 VQQQNIFIGCAAVADY 98 (223)
T ss_dssp GGGCSEEEECCBCCSE
T ss_pred hccceeEeeeechhhh
Confidence 6899999976665444
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=92.66 E-value=0.19 Score=41.79 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=62.9
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CC--
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KN-- 274 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~-- 274 (371)
.++|.-.-.+..+.+..---.|..|+|+|.|++ |...++.+...|+ +|+++.... .+
T Consensus 9 ~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~Ggv-Gl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~ 87 (176)
T d1d1ta2 9 LIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGV-GLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKP 87 (176)
T ss_dssp GGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSC
T ss_pred hhhhHHHHHHHHHHHhhCCCCCCEEEEECCCch-hHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchH
Confidence 456643434444433332346999999999885 9999999999995 788886542 11
Q ss_pred HH---hhc--cCCcEEEEccCCCCcc-c-CCCc-CCCeEEEEeeecCC
Q 017438 275 PE---EIT--RQADIIISAVGQPNMV-R-GSWI-KPGAVIIDVGINPV 314 (371)
Q Consensus 275 l~---~~l--~~ADIVIsAvG~p~~v-~-~d~i-k~gavVIDvgin~~ 314 (371)
.+ +.+ ..+|++|.++|.+..+ . ...+ +++-.++-+|..+.
T Consensus 88 ~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~ 135 (176)
T d1d1ta2 88 ISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS 135 (176)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT
T ss_pred HHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc
Confidence 11 212 5699999999987643 2 2234 55468888887643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.66 E-value=0.046 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=30.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
-|+++|||+|-+ |--+|.+|.+.|+.||+.++..
T Consensus 23 p~~~vIiG~G~i-g~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGGGII-GLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCch-HHHHHHHHHhhCcceeEEEecc
Confidence 489999999875 9999999999999999998764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.65 E-value=0.049 Score=43.68 Aligned_cols=36 Identities=25% Similarity=0.438 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.+|+++|||+|-+ |--+|..|.+.|.+||++++...
T Consensus 34 ~~k~v~VIGgG~i-G~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIGGGYI-GLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECCchH-HHHHHHHHHhhCcceeeeeeccc
Confidence 5799999999885 99999999999999999988653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.55 E-value=0.029 Score=49.50 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhcc---CCCeEEEEeCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQR---EDATVSIVHSRTK 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~---~gAtVtv~h~~t~ 273 (371)
.|+||.++|-|++.=+|+.+|..|++ +|++|.++.|+..
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~ 44 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES 44 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH
Confidence 58999999999987789999999975 7999999987643
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.27 E-value=0.041 Score=43.31 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=31.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+|+++|||+|-+ |--+|..|.+.|++||++++..
T Consensus 32 ~~~vvIiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGGGFI-GLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEECSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCcHH-HHHHHHHhhcccceEEEEeccc
Confidence 589999999885 9999999999999999998764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=92.22 E-value=0.052 Score=46.22 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+||+|||+|-+ |-.+|..|.++|.+|+|+.+.
T Consensus 3 ~~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~ 36 (265)
T d2voua1 3 TTDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERS 36 (265)
T ss_dssp CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence 3579999999886 999999999999999999864
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.09 E-value=0.068 Score=49.23 Aligned_cols=48 Identities=25% Similarity=0.290 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHh------------CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 220 CTPKGCIELLHRY------------GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 220 cTa~gvi~lL~~~------------~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
+|..|++..+++. +.+|+||+|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus 6 ATG~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqGfGn-VG~~~A~~L~e~Gakvv~v 65 (293)
T d1hwxa1 6 ATGRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQGFGN-VGLHSMRYLHRFGAKCVAV 65 (293)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEE
T ss_pred HhHHHHHHHHHHHHHhcccchhccCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 4667777766642 2479999999999998 5999999999999986544
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.08 E-value=0.082 Score=44.40 Aligned_cols=52 Identities=23% Similarity=0.348 Sum_probs=38.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------CCHHhhccCCcEEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------KNPEEITRQADIIIS 287 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------~~l~~~l~~ADIVIs 287 (371)
+|.|||.|- ||.|+|..|. +|.+|+...-.. .+......++|+++.
T Consensus 2 kI~ViGlG~-vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v 79 (196)
T d1dlja2 2 KIAVAGSGY-VGLSLGVLLS-LQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (196)
T ss_dssp EEEEECCSH-HHHHHHHHHT-TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred EEEEECCCh-hHHHHHHHHH-CCCcEEEEECCHHHHHHHhhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccc
Confidence 689999976 6999998775 699999886331 122344578999999
Q ss_pred ccCCCC
Q 017438 288 AVGQPN 293 (371)
Q Consensus 288 AvG~p~ 293 (371)
+++.|.
T Consensus 80 ~vpt~~ 85 (196)
T d1dlja2 80 ATPTNY 85 (196)
T ss_dssp CCCCCE
T ss_pred cCCccc
Confidence 998763
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.07 E-value=0.12 Score=43.11 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=36.3
Q ss_pred EEEEEcCCcccH--HHHHHHhccCC----CeEEEEeCC----------------------------CCCHHhhccCCcEE
Q 017438 240 RAVVIGRSNIVG--MPAALLLQRED----ATVSIVHSR----------------------------TKNPEEITRQADII 285 (371)
Q Consensus 240 ~vvVIG~s~~VG--kpla~lL~~~g----AtVtv~h~~----------------------------t~~l~~~l~~ADIV 285 (371)
|++|||+|.+ | ..++.++++.. .++.....+ +.|.++.++.||+|
T Consensus 3 KI~iIGaGs~-~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV 81 (169)
T d1s6ya1 3 KIATIGGGSS-YTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 81 (169)
T ss_dssp EEEEETTTCT-THHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred EEEEECCChh-hHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence 7899999763 4 34444454432 367766532 24677889999999
Q ss_pred EEccCCCC
Q 017438 286 ISAVGQPN 293 (371)
Q Consensus 286 IsAvG~p~ 293 (371)
|+++|.+.
T Consensus 82 v~ta~~~~ 89 (169)
T d1s6ya1 82 TTQFRVGG 89 (169)
T ss_dssp EECCCTTH
T ss_pred EEccccCC
Confidence 99999764
|
| >d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=92.05 E-value=0.076 Score=42.31 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+||+|+|||.|+. +---|.+|.+-..+||++||+.
T Consensus 25 ~~~k~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~ 60 (126)
T d1trba2 25 YRNQKVAVIGGGNT-AVEEALYLSNIASEVHLIHRRD 60 (126)
T ss_dssp GTTSEEEEECSSHH-HHHHHHHHTTTSSEEEEECSSS
T ss_pred hCCCEEEEECCCHH-HHHHHHHHhhcCCcEEEEeecc
Confidence 48999999999998 8888889988888999999976
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=92.01 E-value=0.049 Score=45.69 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+|+|||.|.. |--+|..+...++.++.+.++
T Consensus 28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~ 64 (235)
T d1w4xa2 28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRT 64 (235)
T ss_dssp CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESS
T ss_pred CCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccc
Confidence 4789999999999998 999999999999877776554
|
| >d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.96 E-value=0.1 Score=43.30 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
.|+|++|++||-+.-|...++.++...|++++++... +.++.+.++.||+|.+.+
T Consensus 1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~ 80 (170)
T d1otha2 1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 80 (170)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeec
Confidence 4799999999998888888888888889999998643 356788999999999766
Q ss_pred C
Q 017438 290 G 290 (371)
Q Consensus 290 G 290 (371)
-
T Consensus 81 ~ 81 (170)
T d1otha2 81 W 81 (170)
T ss_dssp S
T ss_pred e
Confidence 3
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=91.83 E-value=0.11 Score=43.83 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=49.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC----------------------CHHhhccCCcEEEEccCCCCc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK----------------------NPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~----------------------~l~~~l~~ADIVIsAvG~p~~ 294 (371)
.-||.|||++|.+|.-+.++|.++- .+++.+.+... ...+...+.|+++.+++.-..
T Consensus 5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~s 84 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGTT 84 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSHH
T ss_pred ccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccchH
Confidence 3479999999999999999999874 46665544321 112345789999999874221
Q ss_pred --ccCCCcCCCeEEEEeeecCC
Q 017438 295 --VRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~ 314 (371)
+-+...+.+.+|+|.+-.+.
T Consensus 85 ~~~~~~l~~~~~~v~~~~~~~~ 106 (183)
T d2cvoa1 85 QEIIKGLPQELKIVDLSADFRL 106 (183)
T ss_dssp HHHHHTSCSSCEEEECSSTTTC
T ss_pred HHHHHHHHhcCcccccchhhhc
Confidence 22234455555555544443
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.82 E-value=0.044 Score=44.16 Aligned_cols=31 Identities=26% Similarity=0.404 Sum_probs=27.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
+|+|||+|-+ |-.+|..|.++|. +|+|+.+.
T Consensus 2 ~V~IIGaG~a-GL~aA~~L~~~G~~~V~vlE~~ 33 (347)
T d1b5qa1 2 RVIVVGAGMS-GISAAKRLSEAGITDLLILEAT 33 (347)
T ss_dssp CEEEECCBHH-HHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECCcHH-HHHHHHHHHhCCCCcEEEEECC
Confidence 5999999887 9999999999995 79999765
|
| >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Pyrococcus abyssi [TaxId: 29292]
Probab=91.63 E-value=0.11 Score=42.41 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC---------------------CCCHHhhccCCcEEEEcc
Q 017438 236 IKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR---------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~---------------------t~~l~~~l~~ADIVIsAv 289 (371)
|+|++|++||=. +-|.+.++.+|...|++++++.-. +.|+.+.+++||+|.+-.
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~ 78 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTR 78 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECC
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeec
Confidence 789999999984 336899999999999999998643 357889999999988655
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=91.59 E-value=0.047 Score=49.96 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=29.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
|.|+|.|++|.+|..++..|+++|.+|+.+.+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r 33 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 78889999999999999999999999998875
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=91.53 E-value=0.12 Score=40.31 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+-..|+++|||+|-+ |--+|..|.+.|+.||++++..
T Consensus 19 ~~~p~~i~IiG~G~i-g~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 19 QNVPGKLGVIGAGVI-GLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp SSCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred ccCCCeEEEECCChH-HHHHHHHHHHcCCceEEEEeec
Confidence 345699999999875 9999999999999999998765
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.44 E-value=0.055 Score=45.21 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=28.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+|||+|-. |-..|..|.++|.+|+|+.+.
T Consensus 2 ~V~IIGaG~a-GL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 2 NVAVVGGGIS-GLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CEEEECCBHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred eEEEECCCHH-HHHHHHHHHhCCCCEEEEecC
Confidence 6999999887 999999999999999999764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.40 E-value=0.051 Score=43.86 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=28.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+|||+|-. |..+|..|+++|..|+|+.++
T Consensus 7 DviViGaG~~-Gl~~A~~La~~G~~V~vlE~~ 37 (297)
T d2bcgg1 7 DVIVLGTGIT-ECILSGLLSVDGKKVLHIDKQ 37 (297)
T ss_dssp SEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHH-HHHHHHHHHHCCCCEEEEcCC
Confidence 5899999886 999999999999999999875
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=91.37 E-value=0.066 Score=46.33 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=31.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++|+|.|+++-+|+.++..|+++|++|.++.+..
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~ 36 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 36 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 56799999999999999999999999999998763
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.35 E-value=0.077 Score=46.85 Aligned_cols=33 Identities=27% Similarity=0.231 Sum_probs=30.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+|+|.|++|-+|+.++..|+++|++|+.+.+.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~ 33 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR 33 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence 799999999999999999999999999988764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=91.26 E-value=0.085 Score=47.53 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
+-|+|+|+|++|.+|+.++..|+++|.+|++..|+..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~ 38 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK 38 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 4689999999999999999999999999999987643
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=91.23 E-value=0.11 Score=42.41 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=57.1
Q ss_pred ccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------C
Q 017438 216 LFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------K 273 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~ 273 (371)
..++|.-.-.+..|.+..---.|.+|+|.|+|++ |...++++...|+ +|+++.++. .
T Consensus 7 a~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGv-G~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~ 85 (176)
T d2fzwa2 7 CLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGV-GLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 85 (176)
T ss_dssp GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSS
T ss_pred hHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhH-HHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhh
Confidence 3457766656666654433347999999999985 9988888888896 565554431 1
Q ss_pred CHHhhc-----cCCcEEEEccCCCCccc--CCCcCCCe
Q 017438 274 NPEEIT-----RQADIIISAVGQPNMVR--GSWIKPGA 304 (371)
Q Consensus 274 ~l~~~l-----~~ADIVIsAvG~p~~v~--~d~ik~ga 304 (371)
+..+.+ ..+|+||.++|.+..+. .+++++|.
T Consensus 86 ~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~ 123 (176)
T d2fzwa2 86 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW 123 (176)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT
T ss_pred HHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCc
Confidence 222221 34899999999876542 24566653
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=91.15 E-value=0.17 Score=41.37 Aligned_cols=52 Identities=17% Similarity=0.265 Sum_probs=40.3
Q ss_pred CCCCEEEEEcCCcc--cHHHHHHHhccCCCeEEEE-eCC------------------CCCHHhhccCCcEEEE
Q 017438 236 IKGKRAVVIGRSNI--VGMPAALLLQREDATVSIV-HSR------------------TKNPEEITRQADIIIS 287 (371)
Q Consensus 236 l~GK~vvVIG~s~~--VGkpla~lL~~~gAtVtv~-h~~------------------t~~l~~~l~~ADIVIs 287 (371)
|+|++|++||=..- |.+.++.+|...|++++++ ... +.++.+.+++||+|.+
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~ 73 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYV 73 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEE
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEE
Confidence 58999999998664 7899999999999876554 311 2477889999998874
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.14 E-value=0.084 Score=45.32 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-.+|+|+|||+|-+ |...|..|.++|.+|+++...
T Consensus 47 ~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~ 81 (233)
T d1djqa3 47 KNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTA 81 (233)
T ss_dssp SSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred cCCceEEEEcccHH-HHHHHHHHHHhccceeeEeec
Confidence 47899999999997 999999999999999999754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.06 E-value=0.052 Score=42.86 Aligned_cols=34 Identities=29% Similarity=0.419 Sum_probs=31.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.|+++|||+|-+ |--+|..|.+.|++||+.++..
T Consensus 25 p~~~viiG~G~i-glE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGAGYI-GLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEccchH-HHHHHHHHHhcCCeEEEEEEcc
Confidence 589999999775 9999999999999999999865
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.01 E-value=0.071 Score=48.90 Aligned_cols=32 Identities=38% Similarity=0.590 Sum_probs=29.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
||+|+|.|++|.+|..++..|+++|.+|+++.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 89999999999999999999999999999884
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.88 E-value=0.12 Score=42.62 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
+.-+++|+|||.|.+ |-=.|..|.+.|| +|++.+|+.
T Consensus 42 p~~~~kVvVIGGGdt-A~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 42 PSIRGAVIVLGAGDT-AFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCCSEEEEECSSHH-HHHHHHHHHHTTCSEEEEECSSC
T ss_pred ccCCCEEEEECCChh-HHHHHHHHHHcCCcceeEEEeCC
Confidence 345788999999997 9999988999997 688888864
|
| >d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.63 E-value=0.15 Score=43.10 Aligned_cols=55 Identities=20% Similarity=0.329 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
+|+|.+|+.||=+ +-|.+.++.++...|+++++|+-. +.++++.+++||+|.+-
T Consensus 2 ~l~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvVyt~ 81 (185)
T d1dxha2 2 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 81 (185)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccHHHHhhhHHHHHHHHHhhccCCeEEEEeChhhccccccEEEee
Confidence 5789999999954 457999999999999999999632 35778999999999865
Q ss_pred c
Q 017438 289 V 289 (371)
Q Consensus 289 v 289 (371)
+
T Consensus 82 ~ 82 (185)
T d1dxha2 82 V 82 (185)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=90.56 E-value=0.13 Score=46.12 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=28.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+|+|+|++|-+|+.++..|+++|.+|+++.+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~ 32 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 6999999999999999999999999998753
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=90.52 E-value=0.056 Score=44.76 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+|||.|.+ |...|..|.+.|.+|+++++.
T Consensus 4 k~~dVvIIGGGpa-Gl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGSGPA-GYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEECCSHH-HHHHHHHHHTTTCCCEEECCS
T ss_pred CCCcEEEECCCHH-HHHHHHHHHHcCCceEEEEee
Confidence 6789999999997 999999999999999999753
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=90.51 E-value=0.054 Score=46.75 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=37.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---C---C---HHhhcc--CCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---K---N---PEEITR--QADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---~---~---l~~~l~--~ADIVIsAvG~ 291 (371)
+|+|.|++|.+|+.++..|.++|..|.+..+.. . + +++.++ +.|+||..+|.
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 699999999999999999999987665554332 1 2 234454 45999987764
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.51 E-value=0.11 Score=46.13 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=30.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+++|.|++|.+|+.++..|+++|.+|+.+.+.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 789999999999999999999999999988763
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.37 E-value=0.084 Score=41.66 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.-++++|||+|-+ |--+|..|.+.|++||++.+.
T Consensus 19 ~P~~vvIIGgG~i-G~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGASYV-ALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECCCcc-HHHHHHHHhhcCCeEEEEEec
Confidence 3579999999875 999999999999999999764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=90.27 E-value=0.069 Score=47.01 Aligned_cols=31 Identities=10% Similarity=0.231 Sum_probs=28.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
.||+|.|++|.+|+.++..|+++|.+|++++
T Consensus 1 ~KILVTGatGfIGs~lv~~Ll~~g~~V~~id 31 (338)
T d1orra_ 1 AKLLITGGCGFLGSNLASFALSQGIDLIVFD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 3799999999999999999999999999875
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=90.23 E-value=0.11 Score=45.61 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=26.5
Q ss_pred CEEE-EEcCCcccHHHHHHHhccCCCe-------EEEEeCC
Q 017438 239 KRAV-VIGRSNIVGMPAALLLQREDAT-------VSIVHSR 271 (371)
Q Consensus 239 K~vv-VIG~s~~VGkpla~lL~~~gAt-------Vtv~h~~ 271 (371)
|+|+ |-|+|.-+|+.+|..|+++|+. |.++.++
T Consensus 1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~ 41 (240)
T d2bd0a1 1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT 41 (240)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC
Confidence 6754 5588777899999999999986 7777765
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=89.94 E-value=0.24 Score=41.34 Aligned_cols=54 Identities=20% Similarity=0.283 Sum_probs=38.1
Q ss_pred CEEEEEcCCcccHHHHHH---HhccC---CCeEEEEeCC--------------------------CCCHHhhccCCcEEE
Q 017438 239 KRAVVIGRSNIVGMPAAL---LLQRE---DATVSIVHSR--------------------------TKNPEEITRQADIII 286 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~---lL~~~---gAtVtv~h~~--------------------------t~~l~~~l~~ADIVI 286 (371)
-|++|||+|.+ |-+.+. ++... +.++..++.. +.|+++.+.+||+||
T Consensus 3 mKI~iIGaGsv-g~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv 81 (171)
T d1obba1 3 VKIGIIGAGSA-VFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 81 (171)
T ss_dssp CEEEEETTTCH-HHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred cEEEEECCCHH-HhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence 47999999874 865332 33322 2478887643 257889999999999
Q ss_pred EccCCCC
Q 017438 287 SAVGQPN 293 (371)
Q Consensus 287 sAvG~p~ 293 (371)
++++.+.
T Consensus 82 ~~~~~g~ 88 (171)
T d1obba1 82 NTAMVGG 88 (171)
T ss_dssp ECCCTTH
T ss_pred eeccccc
Confidence 9998764
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=89.72 E-value=0.33 Score=39.49 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=58.7
Q ss_pred ccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC--------------------C
Q 017438 216 LFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK--------------------N 274 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~--------------------~ 274 (371)
..++|.-.-.+..+.+..---.|.+|+|+|.|+. |-..+..+...++ .|+++.++.. +
T Consensus 7 a~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~-g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~ 85 (175)
T d1cdoa2 7 CLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAV-GLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSE 85 (175)
T ss_dssp GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSS
T ss_pred HHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCc-cchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcch
Confidence 3457755555666644433346899999999996 6666666777776 6777765421 1
Q ss_pred -HHhhc-----cCCcEEEEccCCCCcccC--CCcCC-CeEEEEeeecC
Q 017438 275 -PEEIT-----RQADIIISAVGQPNMVRG--SWIKP-GAVIIDVGINP 313 (371)
Q Consensus 275 -l~~~l-----~~ADIVIsAvG~p~~v~~--d~ik~-gavVIDvgin~ 313 (371)
.++.. +.+|++|-++|.+..+.. .++++ +.+++=+|...
T Consensus 86 ~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~ 133 (175)
T d1cdoa2 86 PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD 133 (175)
T ss_dssp CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS
T ss_pred hHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC
Confidence 11111 358999999987654321 34444 45666566543
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.70 E-value=0.17 Score=40.69 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
.+||+|+|||.|+. +---|..|.+--.+||++|+..+
T Consensus 32 frgk~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~~ 68 (130)
T d1vdca2 32 FRNKPLAVIGGGDS-AMEEANFLTKYGSKVYIIHRRDA 68 (130)
T ss_dssp GTTSEEEEECCSHH-HHHHHHHHTTTSSEEEEECSSSS
T ss_pred hCCCEEEEEcCchH-HHHHHHHHhCCCCcEEEEEeccc
Confidence 48999999999998 77778888877779999999753
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=89.66 E-value=0.11 Score=45.29 Aligned_cols=31 Identities=29% Similarity=0.295 Sum_probs=25.8
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|-|+|.-+|+.+|..|+++|++|.++.++
T Consensus 5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~ 35 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR 35 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4555887667999999999999999998665
|
| >d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: Dhaf3308-like family: Dhaf3308-like domain: Hypothetical protein Dhaf 3308 species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=89.59 E-value=0.21 Score=44.56 Aligned_cols=51 Identities=24% Similarity=0.303 Sum_probs=39.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------CHHhhccCCcEEE-Ecc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------NPEEITRQADIII-SAV 289 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------~l~~~l~~ADIVI-sAv 289 (371)
...+||+|+|||.- |....+.+++++++|+.++.+ ..++.+.+||+|| |++
T Consensus 118 ~~~~g~kV~vIG~~-----P~v~~l~~~~~~~~VlE~~p~~gd~p~~~~~~lLp~aD~viiTGs 176 (251)
T d2h1qa1 118 NEVKGKKVGVVGHF-----PHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYITCA 176 (251)
T ss_dssp TTTTTSEEEEESCC-----TTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEETH
T ss_pred cccCCCEEEEEecc-----hhHHHHHhcCCcEEEEeCCCCCCCCCchHHHHhhhcCCEEEEEec
Confidence 44579999999983 556667888999999988753 3457799999988 443
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.36 E-value=0.14 Score=43.27 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=28.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
+|+|||+|-+ |-.+|..|.+.|. .|+|+.+..
T Consensus 3 ~V~IvGaG~a-Gl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGAGIG-GLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECcCHH-HHHHHHHHHhCCCCeEEEEeCCC
Confidence 7999999886 9999999999995 999998753
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=89.28 E-value=0.11 Score=42.03 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
++++|+|||+|.+ |--+|..|.+.|++|++..
T Consensus 2 ~~~~VvIIGgG~~-G~e~A~~l~~~g~~v~v~~ 33 (185)
T d1q1ra1 2 ANDNVVIVGTGLA-GVEVAFGLRASGWEGNIRL 33 (185)
T ss_dssp CSCEEEEECCSHH-HHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEECCcHH-HHHHHHHHHHcCCceEEEE
Confidence 4789999999886 9999999999998766653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.23 E-value=0.13 Score=46.12 Aligned_cols=32 Identities=25% Similarity=0.429 Sum_probs=27.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~ 271 (371)
|+|+|||+|-. |-.+|..|+++| .+|++..++
T Consensus 5 KrVaIIGaG~s-Gl~~A~~L~~~~~~~~v~vfEk~ 38 (335)
T d2gv8a1 5 RKIAIIGAGPS-GLVTAKALLAEKAFDQVTLFERR 38 (335)
T ss_dssp CEEEEECCSHH-HHHHHHHHHTTTCCSEEEEECSS
T ss_pred CeEEEECcCHH-HHHHHHHHHHhCCCCCEEEEECC
Confidence 79999999887 999998888777 489998765
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=88.52 E-value=0.13 Score=44.08 Aligned_cols=31 Identities=35% Similarity=0.494 Sum_probs=28.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+|||+|-+ |..+|..|+++|.+|+|+.+.
T Consensus 6 DvvIIGaGi~-Gls~A~~La~~G~~V~vlE~~ 36 (276)
T d1ryia1 6 EAVVIGGGII-GSAIAYYLAKENKNTALFESG 36 (276)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence 6999999775 999999999999999999764
|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=88.37 E-value=0.21 Score=39.67 Aligned_cols=36 Identities=36% Similarity=0.456 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+||+|+|||.|+. +---|..|.+-...|+++|+..
T Consensus 28 ~~gk~V~VvGgG~s-A~~~A~~L~~~a~~V~li~r~~ 63 (126)
T d1fl2a2 28 FKGKRVAVIGGGNS-GVEAAIDLAGIVEHVTLLEFAP 63 (126)
T ss_dssp GBTCEEEEECCSHH-HHHHHHHHHTTBSEEEEECSSS
T ss_pred cCCceEEEEeCCHH-HHHHHHhhhccCCceEEEeccc
Confidence 58999999999997 7677788888777999999875
|
| >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Bacillus subtilis [TaxId: 1423]
Probab=88.16 E-value=0.17 Score=41.57 Aligned_cols=54 Identities=20% Similarity=0.220 Sum_probs=42.9
Q ss_pred CCCCEEEEEcC--CcccHHHHHHHhccCCCeEEEEeCC-----------CCCHHhhccCCcEEEEcc
Q 017438 236 IKGKRAVVIGR--SNIVGMPAALLLQREDATVSIVHSR-----------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~--s~~VGkpla~lL~~~gAtVtv~h~~-----------t~~l~~~l~~ADIVIsAv 289 (371)
++|.++++||- .+-|.+.++.++...|+++++|.-. +.++.+.+++||+|.+..
T Consensus 1 F~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~~~~~~~~~~~~~ea~~~aDviy~~r 67 (151)
T d2at2a2 1 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLR 67 (151)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhccccceeEEEechhccccCceeeeeE
Confidence 47999999997 3226999999999999998888533 246788999999988554
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=88.14 E-value=0.34 Score=39.57 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=59.6
Q ss_pred ccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC---------------------C
Q 017438 216 LFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT---------------------K 273 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t---------------------~ 273 (371)
..++|.-.-.+..+.+..---.|.+|+|+|+|+. |-..+.++...|+ .|++..++. .
T Consensus 7 a~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~-G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~ 85 (176)
T d2jhfa2 7 CLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV-GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 85 (176)
T ss_dssp GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSS
T ss_pred hHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCc-HHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchh
Confidence 3457765555555544443347999999999985 8888888888885 777765432 1
Q ss_pred CHHhhc-----cCCcEEEEccCCCCccc--CCCcCCC-eEEEEeee
Q 017438 274 NPEEIT-----RQADIIISAVGQPNMVR--GSWIKPG-AVIIDVGI 311 (371)
Q Consensus 274 ~l~~~l-----~~ADIVIsAvG~p~~v~--~d~ik~g-avVIDvgi 311 (371)
.+.+.. ..+|++|-++|.+..+. -++++++ .+++=.+.
T Consensus 86 ~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~ 131 (176)
T d2jhfa2 86 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGV 131 (176)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecC
Confidence 122211 35899999999876543 2456554 34444443
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.04 E-value=0.2 Score=42.19 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=26.7
Q ss_pred CEEEEEcCCcccHHHHHHHhcc--CCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR--EDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~--~gAtVtv~h~~ 271 (371)
.+|+|||+|-+ |-..|..|.+ .|++|+|+.+.
T Consensus 2 ~kv~iIGaGpa-Gl~aA~~L~~~~~~~~V~v~e~~ 35 (230)
T d1cjca2 2 PQICVVGSGPA-GFYTAQHLLKHHSRAHVDIYEKQ 35 (230)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHHCSSCEEEEECSS
T ss_pred CeEEEECccHH-HHHHHHHHHhcCCCCeEEEEeCC
Confidence 38999999997 9999998865 47899999654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.04 E-value=0.18 Score=45.05 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=29.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
|||+|.|++|-+|..++..|+++|.+|+++.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld 33 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID 33 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 7999999999999999999999999999874
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.03 E-value=0.14 Score=44.13 Aligned_cols=31 Identities=35% Similarity=0.506 Sum_probs=28.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+|||+|-. |...|..|+++|.+|+|+.++
T Consensus 1 DViVIGaG~a-GL~aA~~L~~~G~~V~VlE~~ 31 (383)
T d2v5za1 1 DVVVVGGGIS-GMAAAKLLHDSGLNVVVLEAR 31 (383)
T ss_dssp SEEEECCBHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHH-HHHHHHHHHhCCCCEEEEecC
Confidence 4899999886 999999999999999999764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=87.52 E-value=0.22 Score=43.19 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~ 271 (371)
+.|+|+|-|++.-+|+.+|+.|+++|+ .|..+.|+
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~ 38 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC
Confidence 468999999998899999999999997 46666655
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.20 E-value=0.069 Score=47.31 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=28.4
Q ss_pred CCCEEEEE-cCCcccHHHHHHHhccC-CCeEEEEeCC
Q 017438 237 KGKRAVVI-GRSNIVGMPAALLLQRE-DATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVI-G~s~~VGkpla~lL~~~-gAtVtv~h~~ 271 (371)
.||+|+|| |++.=+|+.+|..|+++ |++|.++.|+
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~ 37 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD 37 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC
Confidence 48999766 65555699999999875 8999999876
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.08 E-value=0.22 Score=44.28 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.7
Q ss_pred CEE-EEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRA-VVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~v-vVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||| +|.|++|-+|..++..|+++|++|+.+.+.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~ 34 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR 34 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 678 899999999999999999999999987653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=86.80 E-value=0.15 Score=44.44 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=31.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
.|++++|+|||.|++ |-+++..|...|. ++++++..
T Consensus 27 kL~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 27 ALKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HHHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCC
T ss_pred HHhCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECCc
Confidence 368899999999995 9999999999996 89998643
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.74 E-value=0.18 Score=42.13 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=27.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~ 271 (371)
++|+|||+|-+ |-..|..|.++| ..|+|..+.
T Consensus 3 ~~VaVIGaGpa-GL~aA~~L~~~G~~~~~~~~~V~v~E~~ 41 (239)
T d1lqta2 3 YYIAIVGSGPS-AFFAAASLLKAADTTEDLDMAVDMLEML 41 (239)
T ss_dssp EEEEEECCSHH-HHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred cEEEEECcCHH-HHHHHHHHHHcCCccccCCCceEEEecC
Confidence 58999999998 999999998877 579999654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=86.68 E-value=0.39 Score=42.58 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=40.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC----------------------CC-HHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT----------------------KN-PEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t----------------------~~-l~~~l~~ADIVIsAvG~ 291 (371)
||+|.|++|-+|+.++..|+++| .+|+.+.+.+ .+ .+...+++|+||..++.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~ 77 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence 69999999999999999998888 5888875431 11 22366789999977764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=86.43 E-value=0.23 Score=43.60 Aligned_cols=54 Identities=15% Similarity=0.265 Sum_probs=40.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-C------CHHhhc--cCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K------NPEEIT--RQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~------~l~~~l--~~ADIVIsAvG~ 291 (371)
-|+|+|.|++|-+|+.++..|+++|..|.++..+. . .+.+.+ .+.|+|+.+++.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~ 64 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK 64 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchh
Confidence 47999999999999999999999999887764332 1 123333 346888877653
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=86.08 E-value=0.44 Score=40.25 Aligned_cols=85 Identities=20% Similarity=0.141 Sum_probs=54.7
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHHh----hc--c
Q 017438 227 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEE----IT--R 280 (371)
Q Consensus 227 ~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~~----~l--~ 280 (371)
..++..++. .|.+|+|+|+|. +|...+.++...|+ .|+++.+. ..++.+ .+ .
T Consensus 16 ~a~~~a~v~-~G~tVlV~GaG~-vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~ 93 (195)
T d1kola2 16 HGAVTAGVG-PGSTVYVAGAGP-VGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEP 93 (195)
T ss_dssp HHHHHTTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSS
T ss_pred HHHHHhCCC-CCCEEEEECcCH-HHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCC
Confidence 345555553 599999999987 49888888877887 56666443 233332 22 2
Q ss_pred CCcEEEEccCCCCc---------------cc--CCCcCCCeEEEEeeecC
Q 017438 281 QADIIISAVGQPNM---------------VR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 281 ~ADIVIsAvG~p~~---------------v~--~d~ik~gavVIDvgin~ 313 (371)
.+|++|-++|.+.. +. -+.+++|-.|+=+|...
T Consensus 94 g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~ 143 (195)
T d1kola2 94 EVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV 143 (195)
T ss_dssp CEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred CcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence 47999999985421 11 12357787788888654
|
| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=85.97 E-value=1.4 Score=36.75 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEE
Q 017438 93 RDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGI 172 (371)
Q Consensus 93 ~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GI 172 (371)
.+.++++++.+.++.|.+|++.+--+|.|.-+.. .+....+++..|+++.+ +..+.+.+++.+...+-+.| +-||
T Consensus 20 ~e~lr~~~~~~~~~~gr~pkVlla~~g~D~Hd~G-~~~va~~l~~~G~eVi~--lg~~~~~e~iv~aa~~~~ad--vI~i 94 (168)
T d7reqa2 20 VEEARELVEEFEQAEGRRPRILLAKMGQDGHDRG-QKVIATAYADLGFDVDV--GPLFQTPEETARQAVEADVH--VVGV 94 (168)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEEECBTTCCCCHH-HHHHHHHHHHTTCEEEE--CCTTBCHHHHHHHHHHHTCS--EEEE
T ss_pred HHHHHHHHHHHHHhhCCCCeEEEEeCCccHHHHH-HHHHHHHHHhCCcceec--CCCcCcHHHHHHHHHccCCC--EEEE
Confidence 3678888888877779999999999998765443 45677899999988754 55678999999999887643 5554
Q ss_pred EE
Q 017438 173 LV 174 (371)
Q Consensus 173 lV 174 (371)
=.
T Consensus 95 Ss 96 (168)
T d7reqa2 95 SS 96 (168)
T ss_dssp EE
T ss_pred ec
Confidence 43
|
| >d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Escherichia coli [TaxId: 562]
Probab=85.82 E-value=0.38 Score=40.24 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=43.4
Q ss_pred CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
.++|.+++.||=+ +-|...++.++...|+++++|.-. +.++++.+++||+|.+-
T Consensus 2 ~~~~l~i~~vGD~~nnv~~Sli~~~~~~g~~l~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~ 81 (183)
T d1duvg2 2 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 81 (183)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEEechHhhhhHHHHHHHHHHHHhcCCceEEEechhhccccCCEEEEE
Confidence 4678899999954 446888888888889999998632 35678899999999865
Q ss_pred c
Q 017438 289 V 289 (371)
Q Consensus 289 v 289 (371)
+
T Consensus 82 ~ 82 (183)
T d1duvg2 82 V 82 (183)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.75 E-value=0.35 Score=43.29 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=28.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
|.|+|.|++|.+|+.++..|+++|.+|+++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d 32 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVAD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEE
Confidence 7788999999999999999999999999884
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=85.73 E-value=0.39 Score=41.86 Aligned_cols=31 Identities=29% Similarity=0.301 Sum_probs=26.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
-|+|-|++.-+|+.+|..|+++|++|.+..+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~ 33 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYA 33 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4667788887899999999999999988643
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.65 E-value=0.3 Score=43.52 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+-|+++|.|++|.+|+.++..|.++|.+|+.+.+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 35689999999999999999999999999998854
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=85.57 E-value=0.38 Score=41.59 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=31.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhc---cCCCeEEEEeCCCCCH
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQ---REDATVSIVHSRTKNP 275 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~---~~gAtVtv~h~~t~~l 275 (371)
-|+|+|-|++.=+|+.+|..|+ ++|++|+++.|+...+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~ 42 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA 42 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 3889999998888999998875 5789999998875443
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.49 E-value=0.16 Score=43.94 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=28.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+|||+|- +|..+|..|.+.|..|+|..++
T Consensus 4 ~V~IvGaGp-~Gl~~A~~L~~~G~~v~vlE~~ 34 (292)
T d1k0ia1 4 QVAIIGAGP-SGLLLGQLLHKAGIDNVILERQ 34 (292)
T ss_dssp SEEEECCSH-HHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECcCH-HHHHHHHHHHHCCCCEEEEeCC
Confidence 699999986 5999999999999999999765
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=85.29 E-value=0.19 Score=43.22 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=28.8
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++|-|+|.-+|+.+|..|+++|++|.++.++.
T Consensus 4 AlVTGas~GIG~aia~~la~~G~~Vvi~~r~~ 35 (266)
T d1mxha_ 4 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHS 35 (266)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 67889988889999999999999999998763
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.18 E-value=0.27 Score=43.89 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=29.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++|||+|-+ |-.+|..|+++|..|+|..++.
T Consensus 2 ~dv~IIGaG~s-Gl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 2 YDYIIVGSGLF-GAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEEECCSHH-HHHHHHHHGGGTCCEEEECSSS
T ss_pred ccEEEECCcHH-HHHHHHHHHhCCCcEEEEECCC
Confidence 37899999887 9999999999999999997653
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=84.86 E-value=0.67 Score=40.84 Aligned_cols=78 Identities=23% Similarity=0.250 Sum_probs=55.5
Q ss_pred HHHHHhCCCCCC-CEEEEEcCCcccHHHHHHHhcc------CCCeEEEEeCCC-C------------------CHHhhcc
Q 017438 227 ELLHRYGFDIKG-KRAVVIGRSNIVGMPAALLLQR------EDATVSIVHSRT-K------------------NPEEITR 280 (371)
Q Consensus 227 ~lL~~~~i~l~G-K~vvVIG~s~~VGkpla~lL~~------~gAtVtv~h~~t-~------------------~l~~~l~ 280 (371)
.+|..+ ++| |+|.|||.|.- |++=|+.|.. .|..|+|--|.. + ...|.++
T Consensus 35 ~~~~~~---~kg~KkIaViGYGsQ-G~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~ 110 (226)
T d1qmga2 35 PLLPDA---FKGIKQIGVIGWGSQ-APAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETIS 110 (226)
T ss_dssp GGHHHH---TTTCSEEEEECCSSH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHH
T ss_pred hhhHHH---hcCCCEEEEEEeccH-HHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHh
Confidence 345454 689 99999999886 9999999988 446688875442 1 2457889
Q ss_pred CCcEEEEccCC---CCccc--CCCcCCCeEEEE
Q 017438 281 QADIIISAVGQ---PNMVR--GSWIKPGAVIID 308 (371)
Q Consensus 281 ~ADIVIsAvG~---p~~v~--~d~ik~gavVID 308 (371)
+||||...++- ++..+ ...+|+|+.+.-
T Consensus 111 ~ADiVmiLlPDe~Q~~vy~~I~p~Lk~G~~L~F 143 (226)
T d1qmga2 111 GSDLVLLLISDSAQADNYEKVFSHMKPNSILGL 143 (226)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred hCCEEEEecchHHHHHHHHHHHHhcCCCceeee
Confidence 99999999872 22222 025789987654
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=84.56 E-value=0.99 Score=35.14 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=40.7
Q ss_pred CEEEEEcCCcc---cHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNI---VGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~---VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~ 291 (371)
|.+.|||+|.- .|.-+...|++.|.+|+-+|.+. +++.+.-..-|+++..++.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp~ 66 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPP 66 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEEEeCH
Confidence 78999998743 47777888889999999998664 3566666667888877764
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=84.46 E-value=0.19 Score=41.60 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+.++|+|||.|.+ |-..|..|.+.|.+|+++.+
T Consensus 4 ~~~~VvIIGgGpa-Gl~aA~~~ar~g~~v~vie~ 36 (192)
T d1vdca1 4 HNTRLCIVGSGPA-AHTAAIYAARAELKPLLFEG 36 (192)
T ss_dssp EEEEEEEECCSHH-HHHHHHHHHHTTCCCEEECC
T ss_pred ccceEEEECCCHH-HHHHHHHHHHcCCcEEEEEe
Confidence 4689999999997 99999999999999999863
|
| >d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=84.22 E-value=0.77 Score=37.34 Aligned_cols=55 Identities=13% Similarity=0.159 Sum_probs=41.5
Q ss_pred CCCCEEEEEcCCcc--cHHHHHHHhccCC-CeEEEEeCC---------------------CCCHHhhccCCcEEEEccC
Q 017438 236 IKGKRAVVIGRSNI--VGMPAALLLQRED-ATVSIVHSR---------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 236 l~GK~vvVIG~s~~--VGkpla~lL~~~g-AtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG 290 (371)
++|.+|++||=+.- |.+.++.+|...| ..+++|... +.++.+.+.+||+|.+...
T Consensus 2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~ 80 (160)
T d1ekxa2 2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 80 (160)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCSTTTGGGCSEEEECCC
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEeeccchhhhhHHHHHHHhhhccccccccCHHHHhCcCceEEeecc
Confidence 68999999997554 6888888888886 456676421 4578889999999987643
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.64 E-value=0.28 Score=43.76 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=24.4
Q ss_pred CEEEEE-cCCcccHHHHHHHhccCCCeEEEE
Q 017438 239 KRAVVI-GRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 239 K~vvVI-G~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
|+|+|| |+|.=+|+.+|..|+++|++|..+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v 32 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKV 32 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEE
Confidence 567666 887778999999999999975554
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=83.59 E-value=0.56 Score=37.41 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=30.0
Q ss_pred CCCCEEEEE--cCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVI--GRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVI--G~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.-++.++|+ |.|- +|--+|..|.++|++||++.+..
T Consensus 37 ~~~~~vvi~d~ggg~-ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 37 KIGKRVVILNADTYF-MAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CCCSEEEEEECCCSS-HHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCceEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCC
Confidence 457788887 6655 59999999999999999998764
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=83.49 E-value=0.34 Score=41.64 Aligned_cols=31 Identities=23% Similarity=0.459 Sum_probs=28.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+|||+|-+ |-.+|..|+++|.+|++..+.
T Consensus 5 DvvIIGaGi~-Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 5 DVIVVGAGSM-GMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence 6999999775 999999999999999999764
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=83.47 E-value=0.3 Score=42.55 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=27.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
+|+|||+|- +|-.+|..|+++|. +|+++.+.
T Consensus 3 dViIIGaGi-~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGI-VGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSH-HHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCH-HHHHHHHHHHHcCCCcEEEEeCC
Confidence 699999976 49999999999995 79999765
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=83.44 E-value=0.27 Score=43.01 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=28.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|-|++.-+|+.+|..|+++|++|.++.++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~ 33 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDES 33 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGG
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999888999999999999999998765
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.44 E-value=1.1 Score=36.05 Aligned_cols=63 Identities=17% Similarity=0.135 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCc---ccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccC
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSN---IVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~---~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG 290 (371)
.-+.++|.+ -|+|+|||+|. -.|.-++..|.+.|.+|+-+|.+. +++.+.-..-|+++..++
T Consensus 10 ~~i~~~L~~------~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp 83 (139)
T d2d59a1 10 EDIREILTR------YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVK 83 (139)
T ss_dssp HHHHHHHHH------CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSC
T ss_pred HHHHHHHhc------CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeC
Confidence 344555543 48999999883 458888889999999999998763 466666667788888876
Q ss_pred C
Q 017438 291 Q 291 (371)
Q Consensus 291 ~ 291 (371)
.
T Consensus 84 ~ 84 (139)
T d2d59a1 84 P 84 (139)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=83.19 E-value=0.31 Score=41.10 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=27.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.|+|||+|-+ |..+|..|.++|.+|+++.+.
T Consensus 4 DViIIGaG~a-Gl~aA~~la~~G~~V~liEk~ 34 (251)
T d2i0za1 4 DVIVIGGGPS-GLMAAIGAAEEGANVLLLDKG 34 (251)
T ss_dssp SEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence 5899999886 999999999999999999754
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=82.67 E-value=0.36 Score=41.37 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=29.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+|+|||+|.+ |..+|..|.++|.+|+|+.+..
T Consensus 5 ~DViIIGaG~a-Gl~aA~~la~~G~~V~vlEk~~ 37 (253)
T d2gqfa1 5 SENIIIGAGAA-GLFCAAQLAKLGKSVTVFDNGK 37 (253)
T ss_dssp CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSS
T ss_pred CcEEEECcCHH-HHHHHHHHHHCCCcEEEEecCC
Confidence 46999999887 9999999999999999998754
|
| >d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=82.61 E-value=3.2 Score=32.69 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=63.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC-CCCHHhhccCCcEEEEccCCCCcccCCCcC----CCe-EEEEeee
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR-TKNPEEITRQADIIISAVGQPNMVRGSWIK----PGA-VIIDVGI 311 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~-t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik----~ga-vVIDvgi 311 (371)
||++.|--.. -+|....+..++ .+|+..... +.++.+.++++|.|++.... .++.+.++ ++. +|.=.|.
T Consensus 2 KI~~f~~~~~-e~~~~e~~~~~~~~v~v~~~~~~~~~e~~~~~~~~d~viv~~~~--~i~~eil~~l~~~~LK~I~~~~v 78 (134)
T d1j4aa2 2 KIFAYAIRED-EKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQL--DYIAETLQALADNGITKMSLRNV 78 (134)
T ss_dssp EEEECSCCGG-GHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSS--CBCHHHHHHHHHTTCCEEEESSS
T ss_pred eEEEEecccc-cHHHHHHHHHhCCCEEEEECCCCCCHHHHHHhcCCCEEEEecCC--CcCHHHHhhhcccCeeEEEEccC
Confidence 6777777664 788877776665 455555432 35677889999988764332 25555553 232 2322221
Q ss_pred cCCCCCCCCCCceeecccchhhhhhhcceeccCCC-CccHHHHHHHHH
Q 017438 312 NPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG-GVGPMTIAMLLS 358 (371)
Q Consensus 312 n~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG-GVGp~T~amLl~ 358 (371)
-. --+|.+.+.++--.+|-+|| +|...|++|++.
T Consensus 79 G~-------------d~ID~~aa~~~gI~V~N~P~~svae~a~~~ml~ 113 (134)
T d1j4aa2 79 GV-------------DNIDMAKAKELGFQITNVPVYSYTTHAVRNMVV 113 (134)
T ss_dssp CC-------------TTBCHHHHHHTTCEEECCCCSCCBHHHHHHHHH
T ss_pred Cc-------------CccCHHHHHhCCeEEEECCCCcHHHHHHHHHHH
Confidence 11 13566676777667788886 577888777764
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=82.50 E-value=0.47 Score=38.03 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=28.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+|||.|.+ |-..|..+.+.|.+|++.+++
T Consensus 3 DViIIGgGpa-Gl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPA-GAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECcCHH-HHHHHHHHHHcCCeEEEEEEe
Confidence 6899999997 999999999999999999753
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=82.46 E-value=0.25 Score=44.28 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=27.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-|+|+|.|++|.||+.++..|+++|..|+++
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~ 32 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVT 32 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 3799999999999999999999998765554
|
| >d1dlja3 c.26.3.1 (A:295-402) UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain species: Streptococcus pyogenes [TaxId: 1314]
Probab=82.23 E-value=1.7 Score=33.29 Aligned_cols=70 Identities=19% Similarity=0.145 Sum_probs=48.8
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC------------CCCHHhhccC
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR------------TKNPEEITRQ 281 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~------------t~~l~~~l~~ 281 (371)
.-+++.|+....+ .|+|.|+|-. +.-...+...|.+.|++|.++.-. ..++.+.+..
T Consensus 2 k~ii~~l~~~~~~--~k~I~ilGl~fK~n~dD~R~Sp~i~ii~~L~~~g~~v~iyDP~v~~~~~~~~~~~~~~l~~~~~~ 79 (108)
T d1dlja3 2 KQIINVLKEQESP--VKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQ 79 (108)
T ss_dssp HHHHHHHTTSCCS--SCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCCTTCCSEECCCHHHHHHH
T ss_pred HHHHHHHHhccCC--CCEEEEEEEEECCCCcchhhhhHHHHHHHHhccccceeeecCCcChhHhccCCEEEeCHHHHHhh
Confidence 3466677665443 3689999853 233567888899999999987422 2478888999
Q ss_pred CcEEEEccCCCCc
Q 017438 282 ADIIISAVGQPNM 294 (371)
Q Consensus 282 ADIVIsAvG~p~~ 294 (371)
+|+||..+....+
T Consensus 80 sDiII~~~~~~~~ 92 (108)
T d1dlja3 80 ANIIVTNRYDNEL 92 (108)
T ss_dssp CSEEECSSCCGGG
T ss_pred CCEEEEcCCchHH
Confidence 9998877665443
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.12 E-value=1.2 Score=34.11 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc---cCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ---REDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~---~~gAtVtv~h~~t 272 (371)
..|+++|||+|-+ |--+|..|. .+|.+||++++..
T Consensus 19 ~p~~v~ivGgG~i-g~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFI-SVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHH-HHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHH-HHHHHHHhhhcccCCcEEEEEeccc
Confidence 4689999999875 999886554 4567899998764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=81.71 E-value=0.81 Score=37.59 Aligned_cols=93 Identities=16% Similarity=0.137 Sum_probs=55.6
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC-------------------C--H
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK-------------------N--P 275 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~-------------------~--l 275 (371)
+.|.-.-.+..+-+..---.|.+|+|+|.|+ +|...++.+...|+ +|+++.+... | .
T Consensus 8 lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGg-vGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~ 86 (174)
T d1p0fa2 8 IGCGFATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPI 86 (174)
T ss_dssp GGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred hhhHHHHHHHHHHHhhCCCCCCEEEEECCCc-hhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHH
Confidence 4553333333333333335699999999988 59999988888897 6777755421 1 2
Q ss_pred Hhhc-----cCCcEEEEccCCCCccc--CCCcCC-CeEEEEeee
Q 017438 276 EEIT-----RQADIIISAVGQPNMVR--GSWIKP-GAVIIDVGI 311 (371)
Q Consensus 276 ~~~l-----~~ADIVIsAvG~p~~v~--~d~ik~-gavVIDvgi 311 (371)
.+.. +.+|++|-++|.+..+. ...+++ +-.++=+|.
T Consensus 87 ~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~ 130 (174)
T d1p0fa2 87 YEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGL 130 (174)
T ss_dssp HHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEE
Confidence 2221 35799998888776432 223433 334444554
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=81.28 E-value=1.7 Score=34.29 Aligned_cols=56 Identities=25% Similarity=0.288 Sum_probs=41.9
Q ss_pred CCCCEEEEEcCC---cccHHHHHHHhccCC-CeEEEEeCCC---------CCHHhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRS---NIVGMPAALLLQRED-ATVSIVHSRT---------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s---~~VGkpla~lL~~~g-AtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~ 291 (371)
++-|.|+|||+| +-.|..+...|...+ .+|+-+|.+. +++.+.=...|+++.+++.
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~ 74 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK 74 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEecCh
Confidence 567999999998 555777888887666 5899998764 3555655677888888764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.48 E-value=0.48 Score=45.22 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
|++++|+|||+|++ |-.+++.|...|. ++++++..+
T Consensus 35 l~~~kVlvvG~Ggl-G~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 35 LDTCKVLVIGAGGL-GCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHHCCEEEECSSTT-HHHHHHHHHTTTCCCEEEECCCB
T ss_pred HhcCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCC
Confidence 45679999999995 9999999999996 899987553
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=80.41 E-value=0.58 Score=37.28 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=34.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISA 288 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsA 288 (371)
|+.|+|++|-.|+.++..+.++|.++...-. .+..+.+.++|+||--
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id--~~~~~~~~~~DVvIDF 48 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD--VNGVEELDSPDVVIDF 48 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE--TTEEEECSCCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC--CCcHHHhccCCEEEEe
Confidence 6899998555699999999999987654321 2334567788998833
|