Citrus Sinensis ID: 017446

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
Protein Sequence
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTAMP
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccEEEEEEEcccccEEHHHHHHHHHHHcccccEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccHHcccccccccHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccHcccccccHHHHHHHHHHccccccccHHHEHHHHHcccccHEEEEEHHHHHHHHHHHHHHEEEEEHHcccc
Coil and Loop (DISEMBL)
mvedkcitesekKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLpifllpglsaLAYSAFVSFnrmcdrkdQKTLERLRVERKAKIDELKERTNYYTTQQLiqrydpdpaAKAAAATVLASKlgadsglnvfvgdesnfnvplgnsndvevmpssglrnrkqlqprsggagstplhhsdeetsssfgsegpehnqlvvnhhypqvstmhdgGWIARIAAILvgddpsqsyalicgnchmhngesirkdiptllllnneitcttpKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTAMP
Flexible Loop (DISEMBL)
mvedkcitesekkdskavekkrkgiisrlwngifrlkgdDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVErkakidelkertnyyttqqLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGrrishilhitvhtamp
Low Complexity Region (SEG)
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPaakaaaatvlasklgaDSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTAMP
Disordered region (IsUnstruct)
***********************GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVE*KAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNF********************************************************LVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVH****
Disordered Region (DISOPRED)
***************************RLWNGIFRLKGDDFEKRLQYISK*****************RMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTL******************NYYTTQQLI**************************************************************************************************************WIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTA**
Disordered Region (DISEMBL)
*********************RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRK*****************************PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTAMP
Disordered Region (DISPRO)
**********************KGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPD*****************************************************************************************************DGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTA**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDxxxxxxxxxxxxxxxxxxxxxTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVLFMKCSGLKKTIFSFVVCVKVLLGRRISHILHITVHTAMP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	371	2.2.26 [Sep-21-2011]
Q9ZQ34	408	Uncharacterized protein A	no	no	0.814	0.740	0.618	1e-101
Q1KKR9	358	Protein lunapark-B OS=Tak	N/A	no	0.576	0.597	0.251	8e-11
Q6PFM4	402	Protein lunapark-B OS=Dan	yes	no	0.563	0.519	0.253	2e-10
Q7TQ95	425	Protein lunapark OS=Mus m	no	no	0.711	0.621	0.208	3e-08
Q5R891	428	Protein lunapark OS=Pongo	yes	no	0.641	0.556	0.223	4e-08
Q9C0E8	428	Protein lunapark OS=Homo	yes	no	0.700	0.607	0.212	6e-08
Q28HF6	423	Protein lunapark OS=Xenop	yes	no	0.495	0.434	0.243	3e-06
Q6DFJ8	440	Protein lunapark OS=Xenop	N/A	no	0.501	0.422	0.246	5e-06

>sp|Q9ZQ34|Y2433_ARATH Uncharacterized protein At2g24330 OS=Arabidopsis thaliana GN=At2g24330 PE=2 SV=1

 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/317 (61%), Positives = 231/317 (72%), Gaps = 15/317 (4%)

Query: 11  EKKDSKAV-----EKK---RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRR 62
           EK DS  V     EKK   RKG+ SRLWN IFR++GDDFEKRL+ ISKEEA +  R+KRR
Sbjct: 18  EKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVRNRMKRR 77

Query: 63  SQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSA 122
           S T R   R+LI F+V FEVIAV YAIMTTR  +L+WK R+ ++LP+FLLP ++ L YS+
Sbjct: 78  SITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAFLLYSS 137

Query: 123 FVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVL 182
            V F RMCDR+DQ TLE+L+ E   KI+ELKERTNYY TQQLIQRYDPDPAAKAAAATVL
Sbjct: 138 LVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKAAAATVL 197

Query: 183 ASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSD 242
           ASKLGA+SGL VFVGDES      G +N      S GLRNRKQ   R   A +TP+HHSD
Sbjct: 198 ASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETTPIHHSD 254

Query: 243 EETSSSFGSE---GPEHNQLVVNHHY-PQVSTMHDGGWIARIAAILVGDDPSQSYALICG 298
            E++ S  SE   G E NQ +V  HY PQ    HDG WI+RIAA+LVG+DPSQSYALICG
Sbjct: 255 NESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQSYALICG 314

Query: 299 NCHMHNGESIRKDIPTL 315
           NC MHNG + ++D P +
Sbjct: 315 NCRMHNGLARKEDFPYI 331

Arabidopsis thaliana (taxid: 3702)

>sp|Q1KKR9|LNPB_TAKRU Protein lunapark-B OS=Takifugu rubripes GN=lnpb PE=3 SV=1

 Score = 68.6 bits (166), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 9/223 (4%)

Query: 98  NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
            W  R    LP F+ P L        +  F++  +R + K LE L+  +K  ++E+ E  
Sbjct: 69  QWLLRLAMALPFFIYPVLVWFIRRFLIFLFSKRSERNNDK-LEDLKATKKKILEEVMETE 127

Query: 157 NYYTTQQLIQRYDPDPAAKAA-AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDV--- 212
            Y   + +++R+DPD   K    AT +  ++   +G  +     +  ++P+G    V   
Sbjct: 128 TYKNAKAILERFDPDAKKKPELEATPVRPQMTPGAGQELRQRGVALRHMPMGTPVAVTPG 187

Query: 213 ---EVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVS 269
               + P      R  L    G    + L  S + T  S GS  P            +  
Sbjct: 188 ARPPLGPGGTPVERVPLSAPGGPPERSGLAASVQMTPRSLGSPVPGVGMHPPGPPLARPV 247

Query: 270 TMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
              D G + R+   LVGD P   YALIC  C  HNG +++++ 
Sbjct: 248 LPKDRGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEF 290

Takifugu rubripes (taxid: 31033)

>sp|Q6PFM4|LNPB_DANRE Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 20/229 (8%)

Query: 98  NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
            W  R +  LP+   P L  L     +  F++  +R + K LE L+ +++  ++E+ E  
Sbjct: 69  QWGARLITALPLLAFPALVLLLRKMLIFLFSKRTERNNDK-LEDLKTQKRKILEEVMETE 127

Query: 157 NYYTTQQLIQRYDPDPAAKA-AAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVM 215
            Y   + +++R+DP+   KA A AT +   +    G  +        ++ +     V   
Sbjct: 128 TYKNAKLILERFDPESKKKAEAEATPVRPHMTPRPGQEL-----RQRHIAMATPGPVLGP 182

Query: 216 PSSG---LRNRKQLQPRSG--GAGSTPLHHSDEETSSSFG-------SEGPEHNQLVVNH 263
            S G   LR      P  G  G+ STP   S  ET            S GP         
Sbjct: 183 MSPGTTPLRTAPGGPPEKGLAGSASTPAGASQAETPQQMMRRSMNPYSPGPGSGMRPPGP 242

Query: 264 HYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
              +     + G + R+   LVGD P   YALIC  C  HNG +++++ 
Sbjct: 243 PLARPILPRERGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEF 291

Danio rerio (taxid: 7955)

>sp|Q7TQ95|LNP_MOUSE Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 9/273 (3%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LII++ +  +      I+    +   +  R 
Sbjct: 18  LENIDKEIQA-LEEFREKNQRLQKLWVGRLIIYSSILYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
           +  LP F  P +     +  + F      ++ + L+ L+ ++K  ++E+ E+  Y T + 
Sbjct: 75  VMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPDPA-AKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRN 222
           +++R+DPD   AK        + + A  G  +     +  N+    ++  +  P  G  +
Sbjct: 135 ILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPAPASSSQGPPPQGPVS 194

Query: 223 RKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVS---TMHDGGWIAR 279
               +  +   G  P            GS       + ++   P ++      + G + R
Sbjct: 195 PGPAK-DASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPLARPILPRERGALDR 253

Query: 280 IAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
           I   LVGD P   YALIC  C  HNG +++++ 
Sbjct: 254 IVEYLVGDGPQNRYALICQQCFSHNGMALKEEF 286

May be involved in limb and central nervous system development.

Mus musculus (taxid: 10090)

>sp|Q5R891|LNP_PONAB Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1

 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 66/304 (21%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRMS-RHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LI+++ V  +      I+    +   +  R 
Sbjct: 18  LESIDKEIQA-LEEFREKNQRLQKLRVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
              LP F  P +     +  + F      ++ + L+ L+ +RK  ++E+ E+  Y T + 
Sbjct: 75  AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNR 223
           +++R+DPD  +K A      S  GA                       V   P   +R R
Sbjct: 135 ILERFDPD--SKKAKECEPPSAGGA-----------------------VTARPGQEIRQR 169

Query: 224 KQLQ---------PRSGGAGSTPLHHSDEETSSSFGSEGPEHNQL-------VVNHHYPQ 267
              Q         P  G     P+     + SS+ G  GP    +       V+  H   
Sbjct: 170 TAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG--GPPERTVTPALSSNVLPRHLGS 227

Query: 268 VSTMHDG-------------------GWIARIAAILVGDDPSQSYALICGNCHMHNGESI 308
            +T   G                   G + RI   LVGD P   YALIC  C  HNG ++
Sbjct: 228 PATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMAL 287

Query: 309 RKDI 312
           +++ 
Sbjct: 288 KEEF 291

May be involved in limb and central nervous system development.

Pongo abelii (taxid: 9601)

>sp|Q9C0E8|LNP_HUMAN Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2

 Score = 58.9 bits (141), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 22/282 (7%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LI+++ V  +      I+    +   +  R 
Sbjct: 18  LESIDKEIQA-LEEFREKNQRLQKLWVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
              LP F  P +     +  + F      ++ + L+ L+ +RK  ++E+ E+  Y T + 
Sbjct: 75  AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPDPA-AKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRN 222
           +++R+DPD   AK        + + A  G  +     +  N+     +     P+ G   
Sbjct: 135 ILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNL-----SPTPASPNQGPPP 189

Query: 223 RKQLQPRSGGAGSTPLHHSDEETSSSFGSE-------GPEHNQLVVNHHYPQVSTMH--- 272
           +  + P      S P    +   + +  S         P  +   +  H P         
Sbjct: 190 QVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPIL 249

Query: 273 --DGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
             + G + RI   LVGD P   YALIC  C  HNG +++++ 
Sbjct: 250 PRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEF 291

May be involved in limb and central nervous system development.

Homo sapiens (taxid: 9606)

>sp|Q28HF6|LNP_XENTR Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 17/201 (8%)

Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDP-AAKAAAATVLAS 184
           F+R  +R +   LE L+ E+K  ++E+ E+  Y   + +++R+DPD    K     V   
Sbjct: 98  FSRRTERNN-DALELLKTEKKKILEEVMEKETYKAAKLILERFDPDSRKIKELELPVPGP 156

Query: 185 KLGADSGLNVFVGDESNFNV----PLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHH 240
            +    G ++     +  N+    P+    +   +P   L     LQ R   A   P   
Sbjct: 157 PITPRPGQDLRQRTAAQRNISVSTPVNPGQESPQVPGL-LAATPSLQ-RDTSAPGGPPER 214

Query: 241 SDEETSSS------FGSEGPEHNQLVVNHHYPQVSTM---HDGGWIARIAAILVGDDPSQ 291
           S + T  S       GS     + + ++   P ++      + G + R+   LVGD P  
Sbjct: 215 SVQPTPQSNILQRRPGSPATTVSGMAIHPPGPPLARPILPRERGAMDRVIEYLVGDGPQN 274

Query: 292 SYALICGNCHMHNGESIRKDI 312
            YALIC  C  HNG +++++ 
Sbjct: 275 RYALICQQCFSHNGMALKEEF 295

Xenopus tropicalis (taxid: 8364)

>sp|Q6DFJ8|LNP_XENLA Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 13/199 (6%)

Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDP-AAKAAAATVLAS 184
           F+R  +R +   LE L+ E+K  ++E+ E+  Y   + +++R+DPD    K     V   
Sbjct: 98  FSRRTERNN-DALELLKAEKKKILEEVMEKETYKAAKIILERFDPDSRKIKELELPVPGP 156

Query: 185 KLGADSGLNVFVGDESNFNVPLGNS-NDVEVMPS-SGLRNRKQLQPRSGGAGSTPLHHSD 242
            +    G ++     +  N+ +    N  +  P  SGL        R   A   P   S 
Sbjct: 157 PITPRPGQDLRQRTAAQRNISVSTPVNPGQGSPQVSGLLAATPALQRDTSAPGGPPERSV 216

Query: 243 EETSSS------FGSEGPEHNQLVVNHHYPQVSTM---HDGGWIARIAAILVGDDPSQSY 293
           + T  S       GS     + + ++   P ++      + G + R+   LVGD P   Y
Sbjct: 217 QPTPQSNILQRRPGSPATAVSGMALHPPGPPLARPILPRERGAMDRVIEYLVGDGPQNRY 276

Query: 294 ALICGNCHMHNGESIRKDI 312
           ALIC  C  HNG +++++ 
Sbjct: 277 ALICQQCFSHNGMALKEEF 295

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
255574191	398	conserved hypothetical protein [Ricinus	0.849	0.791	0.740	1e-134
449437084	401	PREDICTED: uncharacterized protein At2g2	0.843	0.780	0.7	1e-119
449533006	352	PREDICTED: uncharacterized protein At2g2	0.843	0.889	0.7	1e-119
225427520	429	PREDICTED: uncharacterized protein At2g2	0.811	0.701	0.690	1e-116
224121268	349	predicted protein [Populus trichocarpa]	0.830	0.882	0.682	1e-113
297802924	407	hypothetical protein ARALYDRAFT_491637 [	0.797	0.727	0.651	1e-111
357466475	455	Protein lunapark [Medicago truncatula] g	0.843	0.687	0.649	1e-110
145350344	409	uncharacterized protein [Arabidopsis tha	0.792	0.718	0.638	1e-108
51971040	409	putative protein [Arabidopsis thaliana]	0.792	0.718	0.635	1e-108
356561905	401	PREDICTED: uncharacterized protein At2g2	0.805	0.745	0.690	1e-104

>gi|255574191|ref|XP_002528011.1| conserved hypothetical protein [Ricinus communis] gi|223532637|gb|EEF34423.1| conserved hypothetical protein [Ricinus communis]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/320 (74%), Positives = 272/320 (85%), Gaps = 5/320 (1%)

Query: 1   MVEDKCITESEKKD--SKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILAR 58
           M EDK I E+ K +  S  V+KKRKG +SR+WNGIFRL GDDFEKRLQ ISKEEAA+L+R
Sbjct: 1   MAEDKGIAENNKNEQPSVVVKKKRKGFMSRIWNGIFRLHGDDFEKRLQNISKEEAAVLSR 60

Query: 59  VKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSAL 118
           +K+RS TWR+M+RHLIIF+V+FEVIAV YAIMTTRSM+LNWK RA +VLP+FLLP LS++
Sbjct: 61  MKKRSLTWRKMTRHLIIFSVIFEVIAVCYAIMTTRSMDLNWKMRAFRVLPMFLLPALSSI 120

Query: 119 AYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAA 178
           AYSAFVSF RMCDRKDQKTLERLR ER+AKIDELKE+TNYYTTQQLIQRYDPDPAAKAAA
Sbjct: 121 AYSAFVSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAA 180

Query: 179 ATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPL 238
           ATVLASKLGADSGL V+VGDE+  N P G SNDVE   +SGLRNRKQ+Q RS  AGS+P+
Sbjct: 181 ATVLASKLGADSGLKVYVGDEAKLNTPTGKSNDVEYAQASGLRNRKQVQTRSSSAGSSPV 240

Query: 239 HHSDEETSSSFGSEG---PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYAL 295
           HHS+EE   S  SEG    EHNQLVV HH PQ STMHDGGWIAR+AA+LVG+DP+QSYAL
Sbjct: 241 HHSNEEIICSPQSEGLETSEHNQLVVEHHNPQASTMHDGGWIARLAALLVGEDPTQSYAL 300

Query: 296 ICGNCHMHNGESIRKDIPTL 315
           ICGNC MHNG + ++D P +
Sbjct: 301 ICGNCRMHNGLARKEDFPYI 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437084|ref|XP_004136322.1| PREDICTED: uncharacterized protein At2g24330-like [Cucumis sativus]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/320 (70%), Positives = 260/320 (81%), Gaps = 7/320 (2%)

Query: 1   MVEDKCITESEKKDSKA---VEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILA 57
           M E+K   E EKKDS A    +KK +GI SRLWN IFR++GDDFEKRLQ+ISKEEAA+LA
Sbjct: 1   MAEEKAAGEGEKKDSVADVGRKKKSRGIFSRLWNSIFRVRGDDFEKRLQHISKEEAAVLA 60

Query: 58  RVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSA 117
           R+KRRS TWRRM+R+LIIF+VVFE++AV YAI+TTR+++LNWK RA +VLP+FLLP LS 
Sbjct: 61  RLKRRSLTWRRMARNLIIFSVVFEIVAVCYAIITTRTVDLNWKMRAFRVLPMFLLPALST 120

Query: 118 LAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAA 177
           LAY+AF+SF RMCDRKDQKTLERLR ER+AKIDELKE+TNYY TQQLIQRYDPDPAAKAA
Sbjct: 121 LAYTAFLSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAA 180

Query: 178 AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVE-VMPSSGLRNRKQLQPRSGGAGST 236
           AATVLASK+GADSGL V +GDESN NVP G SNDVE V    GLRNRKQ   RS   GS 
Sbjct: 181 AATVLASKMGADSGLKVRLGDESNPNVPSGKSNDVEFVQAGGGLRNRKQGHSRSSSTGSA 240

Query: 237 PLHHSDEETSSSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSY 293
            LHH +EE      S+ P   EHNQLVV H+ PQ   ++DGGW+ARIAA+LVG+DP+QSY
Sbjct: 241 SLHHIEEEARRPAVSDAPHASEHNQLVVGHYNPQGPAVNDGGWLARIAALLVGEDPTQSY 300

Query: 294 ALICGNCHMHNGESIRKDIP 313
           ALICGNCHMHNG   ++D P
Sbjct: 301 ALICGNCHMHNGLVKKEDFP 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533006|ref|XP_004173468.1| PREDICTED: uncharacterized protein At2g24330-like [Cucumis sativus]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/320 (70%), Positives = 260/320 (81%), Gaps = 7/320 (2%)

Query: 1   MVEDKCITESEKKDSKA---VEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILA 57
           M E+K   E EKKDS A    +KK +GI SRLWN IFR++GDDFEKRLQ+ISKEEAA+LA
Sbjct: 1   MAEEKAAGEGEKKDSVADVGRKKKSRGIFSRLWNSIFRVRGDDFEKRLQHISKEEAAVLA 60

Query: 58  RVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSA 117
           R+KRRS TWRRM+R+LIIF+VVFE++AV YAI+TTR+++LNWK RA +VLP+FLLP LS 
Sbjct: 61  RLKRRSLTWRRMARNLIIFSVVFEIVAVCYAIITTRTVDLNWKMRAFRVLPMFLLPALST 120

Query: 118 LAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAA 177
           LAY+AF+SF RMCDRKDQKTLERLR ER+AKIDELKE+TNYY TQQLIQRYDPDPAAKAA
Sbjct: 121 LAYTAFLSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAA 180

Query: 178 AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVE-VMPSSGLRNRKQLQPRSGGAGST 236
           AATVLASK+GADSGL V +GDESN NVP G SNDVE V    GLRNRKQ   RS   GS 
Sbjct: 181 AATVLASKMGADSGLKVRLGDESNPNVPSGKSNDVEFVQAGGGLRNRKQGHSRSSSTGSA 240

Query: 237 PLHHSDEETSSSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSY 293
            LHH +EE      S+ P   EHNQLVV H+ PQ   ++DGGW+ARIAA+LVG+DP+QSY
Sbjct: 241 SLHHIEEEARRPAVSDAPHASEHNQLVVGHYNPQGPAVNDGGWLARIAALLVGEDPTQSY 300

Query: 294 ALICGNCHMHNGESIRKDIP 313
           ALICGNCHMHNG   ++D P
Sbjct: 301 ALICGNCHMHNGLVKKEDFP 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427520|ref|XP_002264767.1| PREDICTED: uncharacterized protein At2g24330 [Vitis vinifera] gi|296088463|emb|CBI37454.3| unnamed protein product [Vitis vinifera]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/304 (69%), Positives = 248/304 (81%), Gaps = 3/304 (0%)

Query: 12  KKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSR 71
           +KD+   +KKR+GIISR+WNG+FR  GDDFEKRLQ+ISKEEA++LAR+KRRSQ+ R M+R
Sbjct: 19  EKDTGVQKKKRRGIISRIWNGLFRRHGDDFEKRLQHISKEEASVLARMKRRSQSSRTMTR 78

Query: 72  HLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCD 131
           +LI+ +V+ EVIAVGYAIMTTRS++LNWK RA +VLP+FLLPGLS+ AYS  VS  RMCD
Sbjct: 79  NLIVLSVILEVIAVGYAIMTTRSVDLNWKMRAFRVLPMFLLPGLSSAAYSVIVSLTRMCD 138

Query: 132 RKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSG 191
           R+DQKTLERLR ER+AKIDELKERTNYYTTQQLIQRYD DPAAKAAAATVLASKLGA+SG
Sbjct: 139 RRDQKTLERLRAERRAKIDELKERTNYYTTQQLIQRYDTDPAAKAAAATVLASKLGAESG 198

Query: 192 LNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGS 251
           L VFVGDES  +V    SNDVE+  SSGLRNRKQLQ RSG   +  +H S+ E     G 
Sbjct: 199 LKVFVGDESQLDVATAKSNDVELTQSSGLRNRKQLQTRSGNPANPTMHPSEGEMPHQAGV 258

Query: 252 EG---PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESI 308
           EG     H+QLVV H+  Q    +DGGWIARIAA+LVG+DP+QSYALICGNCHMHNG + 
Sbjct: 259 EGTGTSGHDQLVVEHYPHQGVARYDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLAR 318

Query: 309 RKDI 312
           ++D 
Sbjct: 319 KEDF 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121268|ref|XP_002330785.1| predicted protein [Populus trichocarpa] gi|222872587|gb|EEF09718.1| predicted protein [Populus trichocarpa]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/312 (68%), Positives = 259/312 (83%), Gaps = 4/312 (1%)

Query: 8   TESEKKDSKAVEKKRKG-IISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTW 66
           T+S+   S AV+K+  G I+SR+W  +FR  GDDFEKRLQ+ISKEEAA+L+R+ RRS+  
Sbjct: 11  TDSQDSSSPAVKKRSGGGILSRVWKAVFRPHGDDFEKRLQHISKEEAAVLSRINRRSRNR 70

Query: 67  RRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSF 126
           R+++RHLI+F+V+FEVIAVGYAIMTTRSM++NWK RA ++LP+FLLP LS+LAYSAFVSF
Sbjct: 71  RKITRHLIVFSVLFEVIAVGYAIMTTRSMDMNWKMRAFRILPMFLLPALSSLAYSAFVSF 130

Query: 127 NRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKL 186
            RMCDR+DQKTLERL+ ER+AKIDELKE+TNYY+TQQLIQRYDPDPAAKAAAATVLASKL
Sbjct: 131 TRMCDRRDQKTLERLQAERQAKIDELKEKTNYYSTQQLIQRYDPDPAAKAAAATVLASKL 190

Query: 187 GADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETS 246
           GADSGL V+VGDES   +P G SND E + +SGLRNRKQ+   S  +GST + HSDEE  
Sbjct: 191 GADSGLKVYVGDESKPTLPTGKSNDAEFVQASGLRNRKQVHTTSSSSGSTLVQHSDEEMP 250

Query: 247 SSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMH 303
            S  SEGP   EHNQLV  H+ PQ  T +DGGW+ARIAA+LVG+DP+QSYALICGNCHMH
Sbjct: 251 LSVQSEGPLTSEHNQLVAEHYTPQGYTAYDGGWVARIAALLVGEDPTQSYALICGNCHMH 310

Query: 304 NGESIRKDIPTL 315
           NG + ++D P +
Sbjct: 311 NGLARKEDFPYI 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802924|ref|XP_002869346.1| hypothetical protein ARALYDRAFT_491637 [Arabidopsis lyrata subsp. lyrata] gi|297315182|gb|EFH45605.1| hypothetical protein ARALYDRAFT_491637 [Arabidopsis lyrata subsp. lyrata]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/301 (65%), Positives = 247/301 (82%), Gaps = 5/301 (1%)

Query: 17  AVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIF 76
           +V+KK+KG  SRLWNGIFR++GDDFEKRLQYISKEEA +L+R+KRRS TWR+++R+LI+ 
Sbjct: 31  SVKKKQKGFFSRLWNGIFRVRGDDFEKRLQYISKEEATVLSRMKRRSITWRKLTRNLIVS 90

Query: 77  TVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQK 136
           +V+FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQK
Sbjct: 91  SVLFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQK 150

Query: 137 TLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFV 196
           TLE+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL VF+
Sbjct: 151 TLEKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVFL 210

Query: 197 GDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGS 251
           GDES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F  
Sbjct: 211 GDESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPG 270

Query: 252 EGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKD 311
              ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNG + ++D
Sbjct: 271 ATEQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKED 330

Query: 312 I 312
            
Sbjct: 331 F 331

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466475|ref|XP_003603522.1| Protein lunapark [Medicago truncatula] gi|355492570|gb|AES73773.1| Protein lunapark [Medicago truncatula]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/325 (64%), Positives = 263/325 (80%), Gaps = 12/325 (3%)

Query: 1   MVEDKCITESEKKD-------SKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEA 53
           M +DK + E EKK+       S  V+KKRKG ISR+WNGIFRL GDDFEKRL++ISKEEA
Sbjct: 1   MADDKAVEEGEKKETSPTATASGNVKKKRKGFISRIWNGIFRLHGDDFEKRLKHISKEEA 60

Query: 54  AILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLP 113
            ++ARV RRS++ R+ SR+LI+F+V+FEVIAVGYAIMTTRS+ ++WK RA++VLP+FLLP
Sbjct: 61  TVIARVTRRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLP 120

Query: 114 GLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPA 173
            LS+  YSAF++F RMCDR+DQ  LE+LR ER+AKIDELKE+TNYYTTQQLIQRYDPDPA
Sbjct: 121 ALSSAVYSAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPA 180

Query: 174 AKAAAATVLASKLGADSGLNVFVGDESNFN-VPLGNSNDVEVMPSSGLRNRKQLQPRSGG 232
           AKAAAATVLASKLGADSG+ +++GDESN +    G SNDVE++ SSGLRNRKQ+Q RS  
Sbjct: 181 AKAAAATVLASKLGADSGMRLYMGDESNLSGASTGKSNDVELVQSSGLRNRKQVQTRSTS 240

Query: 233 AGSTPLHHSDEETSSSFG---SEGPEHNQ-LVVNHHYPQVSTMHDGGWIARIAAILVGDD 288
            G++  + +D++ + S G   ++  E+NQ  VV HH PQ ST  DGGWIARIAA+LVG+D
Sbjct: 241 PGTSTPNFADQQLAGSGGFDQTQTSEYNQHAVVEHHQPQSSTPQDGGWIARIAALLVGED 300

Query: 289 PSQSYALICGNCHMHNGESIRKDIP 313
           P+QSYALICGNCHMHNG   ++D P
Sbjct: 301 PTQSYALICGNCHMHNGLVRKEDFP 325

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145350344|ref|NP_194837.2| uncharacterized protein [Arabidopsis thaliana] gi|22531219|gb|AAM97113.1| unknown protein [Arabidopsis thaliana] gi|30725690|gb|AAP37867.1| At4g31080 [Arabidopsis thaliana] gi|51969062|dbj|BAD43223.1| putative protein [Arabidopsis thaliana] gi|51969510|dbj|BAD43447.1| putative protein [Arabidopsis thaliana] gi|51971082|dbj|BAD44233.1| putative protein [Arabidopsis thaliana] gi|62320045|dbj|BAD94195.1| putative protein [Arabidopsis thaliana] gi|110740411|dbj|BAF02100.1| hypothetical protein [Arabidopsis thaliana] gi|332660454|gb|AEE85854.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/299 (63%), Positives = 244/299 (81%), Gaps = 5/299 (1%)

Query: 19  EKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTV 78
           +KK+ G  SRLWNGIFR++GDDFEKRLQYIS+EEA +L+R+KRRS +WR+++R+LI+ +V
Sbjct: 35  KKKQNGFFSRLWNGIFRVRGDDFEKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSV 94

Query: 79  VFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTL 138
           +FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQKTL
Sbjct: 95  LFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTL 154

Query: 139 ERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGD 198
           E+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL V++GD
Sbjct: 155 EKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGD 214

Query: 199 ESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGSEG 253
           ES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F    
Sbjct: 215 ESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPGTT 274

Query: 254 PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
            ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNG + ++D 
Sbjct: 275 EQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKEDF 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51971040|dbj|BAD44212.1| putative protein [Arabidopsis thaliana]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/299 (63%), Positives = 244/299 (81%), Gaps = 5/299 (1%)

Query: 19  EKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTV 78
           +KK+ G  SRLWNGIFR++GDDFEKRLQY+S+EEA +L+R+KRRS +WR+++R+LI+ +V
Sbjct: 35  KKKQNGFFSRLWNGIFRVRGDDFEKRLQYVSREEATVLSRMKRRSISWRKLTRNLIVSSV 94

Query: 79  VFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTL 138
           +FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQKTL
Sbjct: 95  LFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTL 154

Query: 139 ERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGD 198
           E+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL V++GD
Sbjct: 155 EKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGD 214

Query: 199 ESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGSEG 253
           ES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F    
Sbjct: 215 ESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPGTT 274

Query: 254 PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKDI 312
            ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNG + ++D 
Sbjct: 275 EQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKEDF 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561905|ref|XP_003549217.1| PREDICTED: uncharacterized protein At2g24330-like [Glycine max]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/304 (69%), Positives = 247/304 (81%), Gaps = 5/304 (1%)

Query: 14  DSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHL 73
           DSK  EKK+KG ISR+WN IFR   DDFEKRL+YI+KEE   L R+  RS++WRR SR L
Sbjct: 21  DSKKNEKKKKGFISRIWNAIFRSNRDDFEKRLEYITKEENMALTRLSNRSRSWRRTSRQL 80

Query: 74  IIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRK 133
           I+F+V+FEVIAVGYAIMTTRSM++NWK RA++VLP+FLLP LS+  Y+AFVSF RMCDRK
Sbjct: 81  ILFSVLFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSSATYTAFVSFTRMCDRK 140

Query: 134 DQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLN 193
           DQK LE LR ERKAKIDELKE+TNYY TQQLIQRYD DPAAKAAAATVLASKLGADSGL 
Sbjct: 141 DQKILESLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLK 200

Query: 194 VFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFG--- 250
           V+VGDES+  V  G + DVEV+ SSGLRNRKQ+  RS   G+T  ++SD++   S     
Sbjct: 201 VYVGDESS-GVSTGKTKDVEVVQSSGLRNRKQVTSRSTSPGTTTPNYSDQQLVGSGKIDQ 259

Query: 251 SEGPEHNQL-VVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIR 309
           ++  EHNQL VV HH PQ STM+DGGWIARIAA+LVG+DP+QSYALICGNCHMHNG + +
Sbjct: 260 TQTHEHNQLVVVEHHNPQSSTMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARK 319

Query: 310 KDIP 313
           +D P
Sbjct: 320 EDFP 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
TAIR|locus:2061047	408	AT2G24330 "AT2G24330" [Arabido	0.819	0.745	0.566	6e-87
UNIPROTKB|F1P4S3	333	KIAA1715 "Uncharacterized prot	0.385	0.429	0.245	1.8e-08
ZFIN|ZDB-GENE-030131-9455	422	lnpb "limb and neural patterns	0.557	0.490	0.242	6.8e-08
DICTYBASE|DDB_G0289961	452	DDB_G0289961 "transmembrane pr	0.482	0.396	0.222	7.9e-08
MGI|MGI:1918115	425	Lnp "limb and neural patterns"	0.374	0.327	0.234	1.2e-07
UNIPROTKB|Q9C0E8	428	LNP "Protein lunapark" [Homo s	0.374	0.324	0.241	1.6e-07
RGD|1312042	425	Lnp "limb and neural patterns"	0.374	0.327	0.234	2e-07
UNIPROTKB|F1PB16	429	KIAA1715 "Uncharacterized prot	0.374	0.324	0.228	4.5e-07
UNIPROTKB|G5EH99	379	MGCH7_ch7g127 "Uncharacterized	0.684	0.670	0.242	2.2e-06
ZFIN|ZDB-GENE-030131-4960	393	lnpa "limb and neural patterns	0.099	0.094	0.432	3.2e-06

TAIR|locus:2061047 AT2G24330 "AT2G24330" [Arabidopsis thaliana (taxid:3702)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 182/321 (56%), Positives = 217/321 (67%)

Query:     7 ITES--EKKDSKAV-----EKK---RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAIL 56
             + ES  EK DS  V     EKK   RKG+ SRLWN IFR++GDDFEKRL+ ISKEEA + 
Sbjct:    12 VVESGGEKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVR 71

Query:    57 ARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLS 116
              R+KRRS T R   R+LI F+V FEVIAV YAIMTTR  +L+WK R+ ++LP+FLLP ++
Sbjct:    72 NRMKRRSITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVA 131

Query:   117 ALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPXXXX 176
              L YS+ V F RMCDR+DQ TLE+L+ E   KI+ELKERTNYY TQQLIQRYDPDP    
Sbjct:   132 FLLYSSLVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKA 191

Query:   177 XXXXXXXXXXXXDSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGST 236
                         +SGL VFVGDES      G +N      S GLRNRKQ   R   A +T
Sbjct:   192 AAATVLASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETT 248

Query:   237 PLHHSDEETSSSFGSE---GPEHNQLVVNHHY-PQVSTMHDGGWIARIAAILVGDDPSQS 292
             P+HHSD E++ S  SE   G E NQ +V  HY PQ    HDG WI+RIAA+LVG+DPSQS
Sbjct:   249 PIHHSDNESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQS 308

Query:   293 YALICGNCHMHNGESIRKDIP 313
             YALICGNC MHNG + ++D P
Sbjct:   309 YALICGNCRMHNGLARKEDFP 329

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P4S3 KIAA1715 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 107 (42.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
 Identities = 37/151 (24%), Positives = 67/151 (44%)

Query:    21 KRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVF 80
             K  G+ISR W    R K    E  L+ I KE    L   + ++Q  +++    ++F    
Sbjct:     1 KMGGLISR-W----RAKPSTVEV-LEKIDKE-IQTLEEFREKNQRLQKLWVGRLLFYSSL 53

Query:    81 EVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLER 140
               +A    I+    +   W  R    LP F  P +     +  + F      ++   LE 
Sbjct:    54 LYLAT-CLIVYLWCLPDEWTARFFMTLPFFAFPLIIWFIRTLLIFFFSKRTERNNDALED 112

Query:   141 LRVERKAKIDELKERTNYYTTQQLIQRYDPD 171
             L+ ++K  ++E+ E+  Y T + +++R+DPD
Sbjct:   113 LKSQKKKILEEVMEKETYKTAKLILERFDPD 143

GO:0007596 "blood coagulation" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

ZFIN|ZDB-GENE-030131-9455 lnpb "limb and neural patterns b" [Danio rerio (taxid:7955)]

 Score = 151 (58.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
 Identities = 55/227 (24%), Positives = 89/227 (39%)

Query:    99 WKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERTN 157
             W  R +  LP+   P L  L     +  F++  +R + K LE L+ +++  ++E+ E   
Sbjct:    90 WGARLITALPLLAFPALVLLLRKVLIFLFSKRTERNNDK-LEDLKTQKRKILEEVMETET 148

Query:   158 YYTTQQLIQRYDPDPXXXXXXXXXXXXXXXXDSGLNVFVGDE-SNFNVPLGNSNDVEVMP 216
             Y   + +++R+DP+                         G E    ++ +     V    
Sbjct:   149 YKNAKLILERFDPESKKKAEAEATPVRPHMTPRP-----GQELRQRHIAMATPGPVLGPM 203

Query:   217 SSG---LRNRKQLQPRSG--GAGSTPLHHSDEET-------SSSFGSEGPEHNQLVVNHH 264
             S G   LR      P  G  G+ STP   S  ET       S +  S GP          
Sbjct:   204 SPGTTPLRTAPGGPPEKGLAGSASTPAGASQAETPQQMMRRSMNPYSPGPGSGMRPPGPP 263

Query:   265 YPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKD 311
               +     + G + R+   LVGD P   YALIC  C  HNG +++++
Sbjct:   264 LARPILPRERGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEE 310

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

DICTYBASE|DDB_G0289961 DDB_G0289961 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 106 (42.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
 Identities = 43/193 (22%), Positives = 89/193 (46%)

Query:    37 KGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSME 96
             K + FEK+L  +  +   +  ++       +++   +++++   E   + +  + +RS+E
Sbjct:     7 KKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLE 66

Query:    97 -LNWKTRA---LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDEL 152
              +  K      L + PIF+L  +    Y  FV   +   +K++  L+ L+   + K+DE 
Sbjct:    67 SIPEKLFCCIYLVLFPIFIL--ILTKVYG-FVY--KYLIKKNEVRLDSLKTGLQKKLDER 121

Query:   153 KERTNYYTTQQLIQRYDPDPXXXXXXXXXXXXXXXXDSGLNVFVGDESNFNVPLGNSNDV 212
             K  T+Y  TQ+L+ RY+ +P                ++  N    + +N N    N+N+ 
Sbjct:   122 KRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNN----NNNNNNNNNNNNNNN 177

Query:   213 EVMPSSGLRNRKQ 225
               + +S +RNR Q
Sbjct:   178 NTLGNS-MRNRNQ 189

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1918115 Lnp "limb and neural patterns" [Mus musculus (taxid:10090)]

 Score = 100 (40.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 35/149 (23%), Positives = 70/149 (46%)

Query:    24 GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEV 82
             G+ SR W    R K    E  L+ I KE  A L   + ++Q  +++    LII++ +  +
Sbjct:     3 GLFSR-W----RAKPSTVEV-LENIDKEIQA-LEEFREKNQRLQKLWVGRLIIYSSILYL 55

Query:    83 IAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLR 142
                   I+    +   +  R +  LP F  P +     +  + F      ++ + L+ L+
Sbjct:    56 FTC--LIVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLK 113

Query:   143 VERKAKIDELKERTNYYTTQQLIQRYDPD 171
              ++K  ++E+ E+  Y T + +++R+DPD
Sbjct:   114 SQKKKILEEVMEKETYKTAKLILERFDPD 142

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007596 "blood coagulation" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032330 "regulation of chondrocyte differentiation" evidence=IMP

GO:0035115 "embryonic forelimb morphogenesis" evidence=IMP

GO:0042733 "embryonic digit morphogenesis" evidence=IGI

UNIPROTKB|Q9C0E8 LNP "Protein lunapark" [Homo sapiens (taxid:9606)]

 Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 36/149 (24%), Positives = 69/149 (46%)

Query:    24 GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEV 82
             G+ SR W    R K    E  L+ I KE  A L   + ++Q  +++    LI+++ V  +
Sbjct:     3 GLFSR-W----RTKPSTVEV-LESIDKEIQA-LEEFREKNQRLQKLWVGRLILYSSVLYL 55

Query:    83 IAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLR 142
                   I+    +   +  R    LP F  P +     +  + F      ++ + L+ L+
Sbjct:    56 FTC--LIVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLK 113

Query:   143 VERKAKIDELKERTNYYTTQQLIQRYDPD 171
              +RK  ++E+ E+  Y T + +++R+DPD
Sbjct:   114 SQRKKILEEVMEKETYKTAKLILERFDPD 142

GO:0007596 "blood coagulation" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=NAS

GO:0060173 "limb development" evidence=NAS

RGD|1312042 Lnp "limb and neural patterns" [Rattus norvegicus (taxid:10116)]

 Score = 98 (39.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 35/149 (23%), Positives = 70/149 (46%)

Query:    24 GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEV 82
             G+ SR W    R K    E  L+ I KE  A L   + ++Q  +++    LII++ +  +
Sbjct:     3 GLFSR-W----RAKPSTVEV-LENIDKEIQA-LEEFREKNQRLQKLWVGRLIIYSSILYL 55

Query:    83 IAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLR 142
                   I+    +   +  R +  LP F  P +     +  + F      ++ + L+ L+
Sbjct:    56 FTC--LIVYLWYLPDEFIARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLK 113

Query:   143 VERKAKIDELKERTNYYTTQQLIQRYDPD 171
              ++K  ++E+ E+  Y T + +++R+DPD
Sbjct:   114 SQKKKILEEVMEKETYKTAKLILERFDPD 142

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0007596 "blood coagulation" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0032330 "regulation of chondrocyte differentiation" evidence=ISO

GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO

GO:0042733 "embryonic digit morphogenesis" evidence=ISO

UNIPROTKB|F1PB16 KIAA1715 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 95 (38.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
 Identities = 34/149 (22%), Positives = 69/149 (46%)

Query:    24 GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEV 82
             G+ SR W    R K    E  L+ I KE  A L   + ++Q  +++    LI+++ +  +
Sbjct:     3 GLFSR-W----RTKPSTVEV-LENIDKEIQA-LEEFREKNQRLQKLWVGRLILYSSILYL 55

Query:    83 IAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLR 142
                   I+    +   +  R    LP F  P +     +  + F      ++ + L+ L+
Sbjct:    56 FTC--LIVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVLIFFFSKRTERNNEALDDLK 113

Query:   143 VERKAKIDELKERTNYYTTQQLIQRYDPD 171
              ++K  ++E+ E+  Y T + +++R+DPD
Sbjct:   114 SQKKKILEEVMEKETYKTAKLILERFDPD 142

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

UNIPROTKB|G5EH99 MGCH7_ch7g127 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 69/284 (24%), Positives = 116/284 (40%)

Query:    41 FEKRLQYISKEEAAILARVKRRSQTWRRM----SRHLIIFTVVFEVIAVGYAIMTTRSME 96
             FEK L  +S +  A  A++ R   T RR+    S +L    +++ ++ V   +  T    
Sbjct:    17 FEKALSSLSAKINATQAQLDRTRSTARRVQVLWSLYLSFAYLIYAIVLV-LVVGWTNLGP 75

Query:    97 LNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERT 156
               W   A    P+ +    +AL  SAF  FN   D    + L+  + ER   + +LKE T
Sbjct:    76 YEWSGVAGG--PVLIYVTRTAL--SAF--FNYRIDSLSTR-LKGQKEERAKTVQKLKEAT 128

Query:   157 NYYTTQQLIQRYDPDPXXXXXXXXXXXXXXXXDSGLNVFVGDESNFNVPLGNSND----V 212
              Y +T +L+++Y  +P                D       G+ S      G++N     +
Sbjct:   129 KYDSTLELLEKYGGEPKRPRGKKGSIGGEDGGDKQ-----GEGSKQPTRPGSANPGRTGI 183

Query:   213 EVMPSSGLRNRKQL---QPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNH-HYPQV 268
                P++ ++ R      QP        P   S E   ++FG  GP  +   +    Y  +
Sbjct:   184 APPPTANIQRRSAPSTPQPPRAAQFPPPREVSAEFAPNAFGPGGPPDSPATMGSAQYAPL 243

Query:   269 --STMHDGGWIARIAAILVGDDPSQS---YALICGNCHMHNGES 307
               S   +  W  RI  +L+GDD   +     LIC +C + NG++
Sbjct:   244 PPSAGSEPHWYDRIMDLLLGDDEMAAKNRIVLICAHCRLVNGQA 287

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-4960 lnpa "limb and neural patterns a" [Danio rerio (taxid:7955)]

 Score = 91 (37.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGESIRKD 311
             G + R+   LVGD P   YALIC  C  HNG +++++
Sbjct:   247 GAVDRVIEYLVGDGPQNRYALICQQCLSHNGMALKEE 283

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00003200001 SubName- Full=Chromosome chr2 scaffold_140, whole genome shotgun sequence; (429 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	371
pfam10058	51	pfam10058, DUF2296, Predicted integral membrane me	2e-11
COG5415	251	COG5415, COG5415, Predicted integral membrane meta	2e-05
COG5415	251	COG5415, COG5415, Predicted integral membrane meta	4e-04

>gnl|CDD|220545 pfam10058, DUF2296, Predicted integral membrane metal-binding protein (DUF2296)

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 18/30 (60%), Positives = 21/30 (70%)

Query: 276 WIARIAAILVGDDPSQSYALICGNCHMHNG 305
           W  R+  +LVGDDP+  YALIC  CH HNG
Sbjct: 1   WFDRVLDVLVGDDPNNRYALICSKCHSHNG 30

This domain, found in various hypothetical bacterial and eukaryotic metal-binding proteins, has no known function. Length = 51

>gnl|CDD|227702 COG5415, COG5415, Predicted integral membrane metal-binding protein [General function prediction only]

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 102 RALQVLPIFLLPGLSALAYS-AFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYT 160
           R   V+   LL   S   +  A        + +  + L +LR   + K+++LKE T+Y  
Sbjct: 68  RPYLVITALLLGSGSLYMFRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNA 127

Query: 161 TQQLIQRYDPDPAAK 175
           T  +IQ+Y  +  AK
Sbjct: 128 TSSIIQKYSEELNAK 142

Length = 251

>gnl|CDD|227702 COG5415, COG5415, Predicted integral membrane metal-binding protein [General function prediction only]

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 271 MHDGGWIARIAAILVGDDP---SQSYALICGNCHMHNG 305
                W  ++ ++L G +    S   ALIC  CH HNG
Sbjct: 166 EDSDAWFDKVISVLAGGNELDLSPFKALICPQCHHHNG 203

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	371
KOG2846	328	consensus Predicted membrane protein [Function unk	100.0
COG5415	251	Predicted integral membrane metal-binding protein	100.0
PF10058	54	DUF2296: Predicted integral membrane metal-binding	99.94
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	94.53
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	93.41
PF10166	131	DUF2368: Uncharacterised conserved protein (DUF236	92.57
PF04678	180	DUF607: Protein of unknown function, DUF607; Inter	89.4
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	87.96
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	84.89
COG5415	251	Predicted integral membrane metal-binding protein	82.91
KOG3507	62	consensus DNA-directed RNA polymerase, subunit RPB	81.68
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	80.96
PF00664	275	ABC_membrane: ABC transporter transmembrane region	80.6
PF10864	130	DUF2663: Protein of unknown function (DUF2663); In	80.11

>KOG2846 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=5.8e-46  Score=359.04  Aligned_cols=242  Identities=25%  Similarity=0.315  Sum_probs=180.0

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcccccchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 017446           71 RHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKID  150 (371)
Q Consensus        71 ~~L~~ys~~l~vi~ivY~~~~~~~~~~~w~~r~~~~lp~l~~P~li~li~~~~~~f~~~~~~~~e~kL~~L~~qkkk~Ie  150 (371)
                      ..++.|++.+|++  .|.++.....+..|..+..+++|++++|++++++++++.+|+.+.+++++.+|.+|++++.++++
T Consensus        15 ~~~~~y~~~~~~~--~~~i~~~~~~~~~~q~~~~~~~p~l~~~~I~~~~~~~~~~y~~~~~~r~~~~lt~L~s~~~~ll~   92 (328)
T KOG2846|consen   15 TFVTKYTSDLYIF--TSQIHQLDYAPEKSQSILSQWQPNLGFPGIILTVRRLSYTYFEYRLNRNTLKLTRLKSQKSKLLE   92 (328)
T ss_pred             eeeeehhHHHHHH--HHHHHhhhccCchhHHHHHHHHHHhcchHHHHHHHHHHHhhhheecccchHHHHHHHHHHHHHHH
Confidence            3344455554444  34444444456788889999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcChHHHHHHHHhcCCChhhHHHHHHHHhhhcCCCCCCccccCCCCC-CCCCCCCCCCcccCCCcccccccCCCCC
Q 017446          151 ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESN-FNVPLGNSNDVEVMPSSGLRNRKQLQPR  229 (371)
Q Consensus       151 elKe~t~Y~~Tk~LLekYd~~~~~~~~aat~~~~k~g~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~lr~R~~~~~~  229 (371)
                      ++++.+.|..++.||+|||++++++..+.|..+.+.+++++++.++.+..+ ...            +.+.+++.+...+
T Consensus        93 ~v~~~~ly~~a~~il~Ry~~~~~a~~~~~t~~~~k~~~~s~~~l~~~~~~r~~~l------------s~~~~~~r~~~t~  160 (328)
T KOG2846|consen   93 LVLETKLYKVALNILERYDPDPAAKRAAPTSLAEKLGARSGLNLTKLTAARQVFL------------SGGKQNQRQANTL  160 (328)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHHHHhhhhhhhhhhhccccCCchhhhhhhhhhcc------------Cccchhhhhcccc
Confidence            999999999999999999999888888889999999999999887776543 111            1222332222221


Q ss_pred             CCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCccCCCccHHHHHHHHHhcCCCCCcceeeccccccccCccCC
Q 017446          230 SGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGESIR  309 (371)
Q Consensus       230 ~~~pg~p~~~~~~~~l~~~~~~~~~~~~q~~~~~~~P~p~~~~er~w~DRv~D~LvGddp~~ryALIC~~C~~HNGlA~k  309 (371)
                      ...-..++ .++.+.+...-++    ....+.+..++....+++++|||||+|+||||||++||||||++||.|||||++
T Consensus       161 ~~~e~nt~-~~s~~~~k~~~~s----~~~~vpg~~~~~~~~~r~~~a~DRI~d~lvGdsP~~ryALIC~~C~~HNGla~~  235 (328)
T KOG2846|consen  161 LNDELNTE-AHSLNNLKYHLES----ASKSVPGKSLFEHYKPRSRAAFDRILDYLVGDSPNNRYALICSQCHHHNGLARK  235 (328)
T ss_pred             cccccccc-ccccccchhhhhc----ccccCCCcCccccCCcchhhHHHHHHHHHhcCCCcchhhhcchhhccccCcCCh
Confidence            11111111 1221112211111    111111111222345788999999999999999999999999999999999999


Q ss_pred             CCCCcceeEcCCCCCcCCcchh
Q 017446          310 KDIPTLLLLNNEITCTTPKSIV  331 (371)
Q Consensus       310 eefe~i~y~C~~C~~~np~~~~  331 (371)
                      |||+||.|+|++||+|||+++.
T Consensus       236 ee~~yi~F~C~~Cn~LN~~~k~  257 (328)
T KOG2846|consen  236 EEYEYITFRCPHCNALNPAKKS  257 (328)
T ss_pred             hhcCceEEECccccccCCCcCC
Confidence            9999999999999999999988

>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]

Probab=100.00  E-value=3.6e-39  Score=293.52  Aligned_cols=219  Identities=20%  Similarity=0.341  Sum_probs=170.4

Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccccchhhhhhhhhhhhhHHHHHH
Q 017446           37 KGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLS  116 (371)
Q Consensus        37 k~~~fEK~L~~L~~kI~~~~~rL~~~~~~~rr~~~~L~~ys~~l~vi~ivY~~~~~~~~~~~w~~r~~~~lp~l~~P~li  116 (371)
                      .-.+|-.+|+.|+++|++.+-++++.+.....|+.++++||+.++++.+.|.||-..     .....+.+..++++.+-.
T Consensus         9 ~~~~~~~~L~rle~qi~q~~~~~~~~qs~l~~~~~r~tv~slAl~~l~~S~iy~~~~-----~y~~~~~It~~llgs~sl   83 (251)
T COG5415           9 FVTKYTADLSRLESQIHQLDVALKKSQSILSQWQSRLTVYSLALTVLALSYIYWEYH-----GYRPYLVITALLLGSGSL   83 (251)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-----ccchhHHHHHHHHhhhHH
Confidence            357888999999999999999999999999999999999999999998888775211     011222333445566777


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHhcCCChhhHHHHHHHHhhhcCCCCCCcccc
Q 017446          117 ALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFV  196 (371)
Q Consensus       117 ~li~~~~~~f~~~~~~~~e~kL~~L~~qkkk~IeelKe~t~Y~~Tk~LLekYd~~~~~~~~aat~~~~k~g~~~~~~~~~  196 (371)
                      |+.|+++.+||.++++|...+|.+|+++|+|+||.||++|.|+.|+.|||||++.+..+.       .+++.   .++  
T Consensus        84 ymfrwal~~lye~r~~r~~~~L~kLra~~rk~l~~LK~e~~y~aT~~ii~ky~e~~~~~~-------~~l~N---~k~--  151 (251)
T COG5415          84 YMFRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNATSSIIQKYSEELNAKY-------QELNN---LKT--  151 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccchhHHH-------HHHhh---HHH--
Confidence            888999999999999999999999999999999999999999999999999986543221       11110   000  


Q ss_pred             CCCCCCCCCCCCCCCcccCCCcccccccCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCccCCCccH
Q 017446          197 GDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGW  276 (371)
Q Consensus       197 ~~e~~~~~~~~~~~~~~~~~~~~lr~R~~~~~~~~~pg~p~~~~~~~~l~~~~~~~~~~~~q~~~~~~~P~p~~~~er~w  276 (371)
                      ..+     -++++       +                      +              ...+            ...++|
T Consensus       152 ~k~-----~~~~~-------s----------------------~--------------~~~~------------~~~~~w  171 (251)
T COG5415         152 EKE-----KFKKE-------S----------------------H--------------VKKK------------EDSDAW  171 (251)
T ss_pred             Hhh-----ccccc-------c----------------------c--------------ccCc------------ccchHH
Confidence            000     00000       0                      0              0011            124699


Q ss_pred             HHHHHHHHhcCCC---CCcceeeccccccccCccCCCCCCcceeEcCCCCCcCCcchhh
Q 017446          277 IARIAAILVGDDP---SQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTTPKSIVL  332 (371)
Q Consensus       277 ~DRv~D~LvGddp---~~ryALIC~~C~~HNGlA~keefe~i~y~C~~C~~~np~~~~~  332 (371)
                      ||||+|.|+|+||   +++|||||.+||.|||+|...|.+.+.|+|++|++||+.+..+
T Consensus       172 ~D~V~~vl~G~ne~~~~~~~alIC~~C~hhngl~~~~ek~~~efiC~~Cn~~n~~~~~~  230 (251)
T COG5415         172 FDKVISVLAGGNELDLSPFKALICPQCHHHNGLYRLAEKPIIEFICPHCNHKNDEVKER  230 (251)
T ss_pred             HHHHHHHHhCCCccccCchhhhccccccccccccccccccchheecccchhhcCccccc
Confidence            9999999999999   7899999999999999999999999999999999999866554

>PF10058 DUF2296: Predicted integral membrane metal-binding protein (DUF2296); InterPro: IPR019273 This domain, found mainly in the eukaryotic lunapark proteins, has no known function []

Probab=99.94  E-value=1.5e-27  Score=176.93  Aligned_cols=51  Identities=33%  Similarity=0.696  Sum_probs=50.2

Q ss_pred             HHHHHHHHHhcCCC---CCcceeeccccccccCccCCCCCCcceeEcCCCCCcC
Q 017446          276 WIARIAAILVGDDP---SQSYALICGNCHMHNGESIRKDIPTLLLLNNEITCTT  326 (371)
Q Consensus       276 w~DRv~D~LvGddp---~~ryALIC~~C~~HNGlA~keefe~i~y~C~~C~~~n  326 (371)
                      |||||+|+|+||||   ++||||||++|++|||||++||+++++|+|++||++|
T Consensus         1 W~Dki~d~L~G~d~~~~~~r~aLIC~~C~~hNGla~~~~~~~i~y~C~~Cg~~N   54 (54)
T PF10058_consen    1 WFDKILDVLLGDDPTSPSNRYALICSKCFSHNGLAPKEEFEEIQYRCPYCGALN   54 (54)
T ss_pred             ChHHHHHHHhCCCCccccCceeEECcccchhhcccccccCCceEEEcCCCCCcC
Confidence            99999999999999   8999999999999999999999999999999999998

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=94.53  E-value=0.3  Score=53.71  Aligned_cols=15  Identities=20%  Similarity=0.122  Sum_probs=8.0

Q ss_pred             hcChHHHHHHHHhcC
Q 017446          155 RTNYYTTQQLIQRYD  169 (371)
Q Consensus       155 ~t~Y~~Tk~LLekYd  169 (371)
                      -|.+.+++.=|+|-+
T Consensus       487 ~ta~qe~qael~k~e  501 (1102)
T KOG1924|consen  487 LTARQEAQAELQKHE  501 (1102)
T ss_pred             HhHHHHHHHHHHHhh
Confidence            455555555555554

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=93.41  E-value=1.2  Score=49.27  Aligned_cols=27  Identities=15%  Similarity=0.297  Sum_probs=15.6

Q ss_pred             HHHHHhhhhcChHHHHHHHHhcCCChh
Q 017446          147 AKIDELKERTNYYTTQQLIQRYDPDPA  173 (371)
Q Consensus       147 k~IeelKe~t~Y~~Tk~LLekYd~~~~  173 (371)
                      +.+|+-|-++.=..+.++-.||+..-.
T Consensus       462 ~~vdkak~eeseqkA~e~~kk~~ke~t  488 (1102)
T KOG1924|consen  462 KMVDKAKAEESEQKAAELEKKFDKELT  488 (1102)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            344444444433477788888887543

>PF10166 DUF2368: Uncharacterised conserved protein (DUF2368); InterPro: IPR019319 This family is conserved from nematodes to humans

Probab=92.57  E-value=2.8  Score=36.82  Aligned_cols=20  Identities=25%  Similarity=0.368  Sum_probs=11.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHH
Q 017446          131 DRKDQKTLERLRVERKAKID  150 (371)
Q Consensus       131 ~~~~e~kL~~L~~qkkk~Ie  150 (371)
                      +...-.+|++.+++=+.+++
T Consensus        92 D~ayG~kl~RIr~eAE~Il~  111 (131)
T PF10166_consen   92 DMAYGTKLQRIREEAERILE  111 (131)
T ss_pred             HHHhhHHHHHHHHHHHHHHH
Confidence            33445567777776554444

The function is not known.

>PF04678 DUF607: Protein of unknown function, DUF607; InterPro: IPR006769 This entry represents the C-terminal domain of coiled-coil domain containing protein 109

Probab=89.40  E-value=9.4  Score=34.93  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHH
Q 017446           42 EKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVI   83 (371)
Q Consensus        42 EK~L~~L~~kI~~~~~rL~~~~~~~rr~~~~L~~ys~~l~vi   83 (371)
                      ++.|..+++++..++..-.......++-.+++...++.+.++
T Consensus        63 ~~~l~~~~~el~~le~~k~~id~~A~~~~~~~~w~gl~~l~~  104 (180)
T PF04678_consen   63 RKRLEELRQELAPLEKIKQEIDEKAEKRARRLLWGGLALLVV  104 (180)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345666777766555444444444444334444444444333

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=87.96  E-value=0.42  Score=29.95  Aligned_cols=18  Identities=6%  Similarity=-0.092  Sum_probs=13.4

Q ss_pred             CccCCCCCCcceeEcCCCCC
Q 017446          305 GESIRKDIPTLLLLNNEITC  324 (371)
Q Consensus       305 GlA~keefe~i~y~C~~C~~  324 (371)
                      .||+.|  ..+.|.||.||.
T Consensus         7 ~i~~r~--~~v~f~CPnCG~   24 (24)
T PF07754_consen    7 PIAPRE--QAVPFPCPNCGF   24 (24)
T ss_pred             cccCcc--cCceEeCCCCCC
Confidence            355544  489999999995

It is likely to bind zinc via its four well-conserved cysteine residues.

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=84.89  E-value=0.62  Score=31.14  Aligned_cols=25  Identities=20%  Similarity=0.283  Sum_probs=17.7

Q ss_pred             eccccccccCccCCCCCCcceeEcCCCCCc
Q 017446          296 ICGNCHMHNGESIRKDIPTLLLLNNEITCT  325 (371)
Q Consensus       296 IC~~C~~HNGlA~keefe~i~y~C~~C~~~  325 (371)
                      ||..|..-|.+-..+.     -+|++||+.
T Consensus         2 ~C~~Cg~~~~~~~~~~-----irC~~CG~R   26 (32)
T PF03604_consen    2 ICGECGAEVELKPGDP-----IRCPECGHR   26 (32)
T ss_dssp             BESSSSSSE-BSTSST-----SSBSSSS-S
T ss_pred             CCCcCCCeeEcCCCCc-----EECCcCCCe
Confidence            7999999999654332     399999985

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]

Probab=82.91  E-value=24  Score=33.55  Aligned_cols=62  Identities=6%  Similarity=0.002  Sum_probs=42.2

Q ss_pred             cceeeecccccccccCCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHH
Q 017446           22 RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAV   85 (371)
Q Consensus        22 ~ggi~Sr~w~~~Fr~k~~~fEK~L~~L~~kI~~~~~rL~~~~~~~rr~~~~L~~ys~~l~vi~i   85 (371)
                      ||.+|++=+--=|+.+=+-.|.+++.++..+.+.++.++.-+  .|-.+..|.+|.+.+..+|.
T Consensus         1 mG~~f~K~~~~~~~~~L~rle~qi~q~~~~~~~~qs~l~~~~--~r~tv~slAl~~l~~S~iy~   62 (251)
T COG5415           1 MGSRFDKDFVTKYTADLSRLESQIHQLDVALKKSQSILSQWQ--SRLTVYSLALTVLALSYIYW   62 (251)
T ss_pred             CCccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHh
Confidence            677777622111355555678888989988888888776653  34467788888887777765

>KOG3507 consensus DNA-directed RNA polymerase, subunit RPB7

Probab=81.68  E-value=0.8  Score=34.79  Aligned_cols=27  Identities=22%  Similarity=0.393  Sum_probs=23.3

Q ss_pred             eeeccccccccCccCCCCCCcceeEcCCCCCc
Q 017446          294 ALICGNCHMHNGESIRKDIPTLLLLNNEITCT  325 (371)
Q Consensus       294 ALIC~~C~~HNGlA~keefe~i~y~C~~C~~~  325 (371)
                      --||..|++-|-+-+++     .++|-+|||.
T Consensus        20 iYiCgdC~~en~lk~~D-----~irCReCG~R   46 (62)
T KOG3507|consen   20 IYICGDCGQENTLKRGD-----VIRCRECGYR   46 (62)
T ss_pred             EEEeccccccccccCCC-----cEehhhcchH
Confidence            47999999999998876     3699999985

0 [Transcription]

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=80.96  E-value=1.1  Score=32.05  Aligned_cols=26  Identities=23%  Similarity=0.377  Sum_probs=19.6

Q ss_pred             eeccccccccCccCCCCCCcceeEcCCCCCc
Q 017446          295 LICGNCHMHNGESIRKDIPTLLLLNNEITCT  325 (371)
Q Consensus       295 LIC~~C~~HNGlA~keefe~i~y~C~~C~~~  325 (371)
                      .||..|..-|-+-     +.-.-+|++||+.
T Consensus         3 Y~C~~Cg~~~~~~-----~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----CCCceECCCCCce
Confidence            5899998877654     2345799999985

present in RNA polymerase I, II and III

>PF00664 ABC_membrane: ABC transporter transmembrane region; InterPro: IPR001140 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=80.60  E-value=13  Score=33.07  Aligned_cols=39  Identities=8%  Similarity=0.157  Sum_probs=26.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHhcCCCh
Q 017446          134 DQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDP  172 (371)
Q Consensus       134 ~e~kL~~L~~qkkk~IeelKe~t~Y~~Tk~LLekYd~~~  172 (371)
                      ..+..+++.+.-.+.++-.+.-..|+.-+...+||+...
T Consensus       172 ~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~  210 (275)
T PF00664_consen  172 YQEANSELNSFLSESLSGIRTIKAFGAEDYFLERFNKAL  210 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHTTSHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhHHHHHHHhhHHHHHHHHHHH
Confidence            344555566666667777777777888888888887543

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). A variety of ATP-binding transport proteins have a six transmembrane helical region. They are all integral membrane proteins involved in a variety of transport systems. Members of this family include; the cystic fibrosis transmembrane conductance regulator (CFTR), bacterial leukotoxin secretion ATP-binding protein, multidrug resistance proteins, the yeast leptomycin B resistance protein, the mammalian sulphonylurea receptor and antigen peptide transporter 2. Many of these proteins have two such regions.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3G61_B 3G5U_B 3G60_A 3B60_D 3QF4_B 2HYD_A 2ONJ_A 4A82_B 4AA3_A 2YL4_A.

>PF10864 DUF2663: Protein of unknown function (DUF2663); InterPro: IPR020210 This entry represents a group of uncharacterised transmembrane proteins

Probab=80.11  E-value=41  Score=29.59  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=14.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHh-hhhcChHHHHH
Q 017446          133 KDQKTLERLRVERKAKIDEL-KERTNYYTTQQ  163 (371)
Q Consensus       133 ~~e~kL~~L~~qkkk~Ieel-Ke~t~Y~~Tk~  163 (371)
                      +.|+.-..||.|-=++=.+| ++....++=.+
T Consensus        83 KAEkefhaLRcEiI~kS~dLW~~~~~W~~R~~  114 (130)
T PF10864_consen   83 KAEKEFHALRCEIIQKSKDLWPKEESWKKRHE  114 (130)
T ss_pred             HHHHHHHHHHHHHHHhHHhcccCchhHHHHHH
Confidence            44555666666544433344 34444444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	371
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 3e-09
 Identities = 55/355 (15%), Positives = 103/355 (29%), Gaps = 89/355 (25%)

Query: 40  DFEKRLQYISKEEA-AILARVKRRSQTWR-----RMSRHLIIFTVVFEVIAVGYAIMTTR 93
           D  K +  +SKEE   I+      S T R        +  ++   V EV+ + Y  + + 
Sbjct: 40  DMPKSI--LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97

Query: 94  SMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELK 153
                 KT   Q       P +    Y      +R+ +  D +   +  V R     +L+
Sbjct: 98  -----IKTEQRQ-------PSMMTRMYIEQR--DRLYN--DNQVFAKYNVSRLQPYLKLR 141

Query: 154 ERTNYYTTQQLIQRYDPDP---------AAKAAAATVLASKLGADSGLNVFVGDESNFNV 204
                    Q +    P           + K    T +A  +         V  + +F +
Sbjct: 142 ---------QALLELRPAKNVLIDGVLGSGK----TWVALDVCLSYK----VQCKMDFKI 184

Query: 205 ---PLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVV 261
               L N N     P + L   ++L  +     ++   HS         S   E  +L+ 
Sbjct: 185 FWLNLKNCNS----PETVLEMLQKLLYQIDPNWTSRSDHS-SNIKLRIHSIQAELRRLLK 239

Query: 262 NHHYPQVSTMHDGGWIARIAA-------ILV-GDDPSQSYALICGNCHMHNGESIRKDIP 313
           +  Y     +      A+          IL+       +  L           +    I 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL---------SAATTTHIS 290

Query: 314 TLLLLNNEITCTTPKSIVLFMKCSGLK--------KTIFSFVVCVKVLLGRRISH 360
              L ++ +T T  +   L +K    +         T     +    ++   I  
Sbjct: 291 ---LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---IIAESIRD 339

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	371
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	81.97

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=81.97  E-value=0.44  Score=34.16  Aligned_cols=27  Identities=11%  Similarity=0.010  Sum_probs=18.0

Q ss_pred             ceeeccccccccCccCCCCCCcceeEcCCCCCcCC
Q 017446          293 YALICGNCHMHNGESIRKDIPTLLLLNNEITCTTP  327 (371)
Q Consensus       293 yALIC~~C~~HNGlA~keefe~i~y~C~~C~~~np  327 (371)
                      -.-||..|.++||        .-.+.|-.||+.|=
T Consensus        13 ~k~iCpkC~a~~~--------~gaw~CrKCG~~~l   39 (51)
T 3j21_g           13 KKYVCLRCGATNP--------WGAKKCRKCGYKRL   39 (51)
T ss_dssp             SEEECTTTCCEEC--------TTCSSCSSSSSCCC
T ss_pred             CCccCCCCCCcCC--------CCceecCCCCCccc
Confidence            3467888888754        33457888887753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	371
d1twfi2	72	RBP9 subunit of RNA polymerase II {Baker's yeast (	81.14

>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: RBP9 subunit of RNA polymerase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.14  E-value=0.41  Score=34.83  Aligned_cols=40  Identities=18%  Similarity=0.332  Sum_probs=26.9

Q ss_pred             cCCCCC-cceeeccccccccCccC------CCCCCcceeEcCCCCCc
Q 017446          286 GDDPSQ-SYALICGNCHMHNGESI------RKDIPTLLLLNNEITCT  325 (371)
Q Consensus       286 Gddp~~-ryALIC~~C~~HNGlA~------keefe~i~y~C~~C~~~  325 (371)
                      |.||+- +-...|.+|..++...-      -.|-.-+-|.|..|||.
T Consensus        14 ~~DPtlp~t~~~CpkCg~~~a~~~q~QtRsaDE~mT~Fy~C~~C~h~   60 (72)
T d1twfi2          14 GSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHI   60 (72)
T ss_dssp             GGCTTSCCCCCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCE
T ss_pred             ccCCCCCccCCCCCCCCCCeEEEEEeecCccCCCceEEEEcCCCCCC
Confidence            445542 23468999996665443      23556688999999984